Citrus Sinensis ID: 044905

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------
Protein Sequence
RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQETIYVDDD
Secondary Structure (PSIPRED)
cccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHccccEEEEcccccccccccccccEEEccccccccccccccHHHHHHHHHHHcccccccccEEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccHHHccccEEcccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccHHccccccHHHHHHHHcccccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcEEccccHccccEEEEEccccHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccEEEccccccccccccccHHHHHHHHHHHHHccHHHHccEEEEEcccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccHHHHHHHHHHHHcccccccccEEEEEEccHHHHHccccccEEEcccccccccccccccccccccccccccccHHHcHHHccccccEEEEEccc
Coil and Loop (DISEMBL)
RKDSGTVFVAGATGQAGVRIAQTLLRegfsvragvpelGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVvvtigptedgptsevstsDAFQVIQAAQLAGVGHVAIIydgnttaasTYNVLDGISSFFNNlfsrnqpltvPEFLQKVIETDVSYTFIKTsltedfspessynVVVSAeasvdandyKVAKSQIASLVADVFSNTAVAENKVVkvftdpsaparRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAKAASLAEEAQEkadvagapmDTLLSKAkgigsgfswdkfSSQITTAVQKstdqipkvQIATVRgqakartlpstKAAVKQTtakpravtkpkeelpkAKAKQINESKPEVRKAFgglfqqetiyvddd
Flexible Loop (DISEMBL)
rkdsgtvfvagatgqagvrIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTsltedfspessYNVVVSAEASVDANDYKVAKSQIASLVADVFSNtavaenkvvkvftdpsaparrVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAvqkstdqipkvQIATvrgqakartlpstkaavkqttakpravtkpkeelpkakakqineskpevrkafgglfqqetiyvddd
Low Complexity Region (SEG)
RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRraayaealakekaekeariaaekareaaeaatkleeevkklSEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTkpkeelpkakakQINESKPEVRKAFGGLFQQETIYVDDD
Disordered region (IsUnstruct)
******VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE*NFD*AESIAKAIGNAGKVVVTIG*************DAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDP******VDELFSAI********************************************************************************IGSGFSWDKFSSQITT**********************************************************************GLFQ***I*****
Disordered Region (DISOPRED)
**DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA*********YKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE***********************************************************************LLSKAKGIGSGFSWDKFSS***********************************************************************AFGGLFQQETIYV***
Disordered Region (DISEMBL)
RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPT*********TSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYA*******************************************************VAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVR*****************************************ESKPEVRKAFGGLFQQETIYVDDD
Disordered Region (DISPRO)
***SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARI******************************************************KGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQT************************SKPEVRKAFGGLFQQETIYVDDD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQETIYVDDD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	427	2.2.26 [Sep-21-2011]
Q8SKU2	534	Protein TIC 62, chloropla	N/A	no	0.540	0.432	0.268	1e-13
Q8H0U5	641	Protein TIC 62, chloropla	no	no	0.681	0.453	0.241	8e-11
Q8H124	280	Uncharacterized protein A	no	no	0.512	0.782	0.269	1e-05

>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2

 Score = 78.2 bits (191), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 33/264 (12%)

Query: 2   KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKIL------- 54
           KD   VFVAGATG+ G R  + L++ GF VRAGV     AQ+   L  S K L       
Sbjct: 86  KDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGV---RNAQKAGALVQSVKQLKLDGASG 142

Query: 55  SKEELKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTED------GPTSEVSTSDAFQV 108
             E +++L  VE + + A+ I  A+GNA  V+  IG +E       GP   +       +
Sbjct: 143 GGEAVEKLEIVECDLEKADQIGSALGNASTVICAIGASEKEIFDITGP-CRIDYRATKNL 201

Query: 109 IQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDV 168
           + AA +A V H  ++    +   + + +   I + F  +    +     +  + ++ + +
Sbjct: 202 VDAATVAKVNHFILV---TSLGTNKFGLPAAILNLFWGVLIWKR-----KAEEALLASGI 253

Query: 169 SYTFIKTSLTEDFSPESSY----NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAE 224
            YT ++    E   P  +Y    NV +S E ++     +V+  Q+A L+A +  N  ++ 
Sbjct: 254 PYTIVRPGGME--RPTDAYKETHNVTLSTEDTLFGG--QVSNLQVAELMAIMAKNPDLSY 309

Query: 225 NKVVKVFTDPSAPARRVDELFSAI 248
            K+V+V  + +AP    ++L + I
Sbjct: 310 CKIVEVIAETTAPLTPAEKLLTRI 333

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)

>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 140/319 (43%), Gaps = 28/319 (8%)

Query: 2   KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEE--- 58
           K+   VFVAGATG+ G R  + LL+ GF VRAGV     A  L +     K+ + +E   
Sbjct: 79  KEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQ 138

Query: 59  -LKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTED------GPTSEVSTSDAFQVIQA 111
            +++L  VE + +  +SI  A+GNA  ++  IG +E       GP   +       ++ A
Sbjct: 139 PVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITGP-YRIDYLATKNLVDA 197

Query: 112 AQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYT 171
           A  A V +  ++    +   + +     I + F  +    +     +  + +IE+ ++Y 
Sbjct: 198 ATSAKVNNFILV---TSLGTNKFGFPAAILNLFWGVLCWKR-----KAEEALIESGLNYA 249

Query: 172 FIKTSLTEDFSPESSYNVVVSAEASVDANDY--KVAKSQIASLVADVFSNTAVAENKVVK 229
            ++    E   P  +Y    +   ++D   +  +V+  Q+A L+A +  N  ++ +K+V+
Sbjct: 250 IVRPGGME--RPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKIVE 307

Query: 230 VFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEE 289
           V  + +AP   +++L   I     +  Y        A KE +    K       A K +E
Sbjct: 308 VVAETTAPLTPIEKLLEKIPS---KRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDE 364

Query: 290 EVKKLSEQEAKAASLAEEA 308
              K  E+  K   L+  A
Sbjct: 365 APPK--EKNVKPRPLSPYA 381

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1

 Score = 51.2 bits (121), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 33/252 (13%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           VFVAGATGQ G RI + LL  GF+V+AGV ++  A+       S+K     ++ R +  E
Sbjct: 49  VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAK------TSFKDDPSLQIVRADVTE 102

Query: 67  SNFDSAESIAKAIGNAGKVVVT---IGPTEDGPTS-EVSTSDAFQVIQAAQLAGVGHVAI 122
                 + +A+ IG+  + V+      P  D  T  +V       ++ A +  GV    +
Sbjct: 103 ----GPDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVL 158

Query: 123 IYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQ---KVIETDVSYTFIKTSLTE 179
           +       A+   +L+  +  F NLF     LT+   LQ    + ++ ++YT ++    +
Sbjct: 159 VSSILVNGAAMGQILNP-AYLFLNLFG----LTLVAKLQAEKYIKKSGINYTIVRPGGLK 213

Query: 180 DFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN---KVVKVFTDPSA 236
           +  P    NVV+  E ++    Y+ + S+   LVA+V     + E    KVV++     A
Sbjct: 214 NDPPTG--NVVMEPEDTL----YEGSISR--DLVAEVAVEALLQEESSFKVVEIVARAEA 265

Query: 237 PARRVDELFSAI 248
           P R   +LF+++
Sbjct: 266 PKRSYKDLFASV 277

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	427
356538974	516	PREDICTED: uncharacterized protein LOC10	0.983	0.813	0.752	1e-172
356542209	513	PREDICTED: uncharacterized protein LOC10	0.983	0.818	0.740	1e-167
224059444	516	predicted protein [Populus trichocarpa]	0.983	0.813	0.784	1e-166
118486499	513	unknown [Populus trichocarpa]	0.988	0.822	0.772	1e-166
255558986	513	conserved hypothetical protein [Ricinus	0.983	0.818	0.748	1e-158
225434849	516	PREDICTED: uncharacterized protein LOC10	0.992	0.821	0.756	1e-153
42565672	510	protein plastid transcriptionally active	0.976	0.817	0.667	1e-148
297815840	510	PTAC16 [Arabidopsis lyrata subsp. lyrata	0.976	0.817	0.665	1e-139
357472863	536	hypothetical protein MTR_4g064750 [Medic	0.948	0.755	0.624	1e-138
449450918	572	PREDICTED: uncharacterized protein LOC10	0.967	0.722	0.561	1e-127

>gi|356538974|ref|XP_003537975.1| PREDICTED: uncharacterized protein LOC100801140 [Glycine max]

 Score =  610 bits (1572), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 322/428 (75%), Positives = 366/428 (85%), Gaps = 8/428 (1%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKD  TVFVAGATGQAG+RIAQTLLREGFSVRAGVPELG+AQELARLA  YKI+S E+ K
Sbjct: 96  RKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELARLATQYKIISNEQAK 155

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAV+S+FD+A++IAKAIGNAGKVVVTIGPTE+GPT+EVS+SDA QV+QAAQLAGVGHV
Sbjct: 156 RLNAVQSSFDNADTIAKAIGNAGKVVVTIGPTENGPTAEVSSSDALQVVQAAQLAGVGHV 215

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AI+YD ++T ASTYNVLDG+SSFFNNLFSR+QPLT+ EFLQKVIETDV YTFIKTSLT+D
Sbjct: 216 AIVYDESSTGASTYNVLDGLSSFFNNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDD 275

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           FSPESSYNVVV  E S  ANDYKVAKS+IASLVADVFSNT VAENKVVKV +DPSAP +R
Sbjct: 276 FSPESSYNVVVLGEGSASANDYKVAKSKIASLVADVFSNTEVAENKVVKVHSDPSAPLKR 335

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK 300
           VDELFS I EDGRR AYAE   K KAE+EAR+AAEKAREA+E+A KLEEEVK+LS+QE +
Sbjct: 336 VDELFSPIPEDGRRKAYAEMQEKTKAEEEARVAAEKAREASESAKKLEEEVKRLSQQETR 395

Query: 301 AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQK-STDQIPKVQIA 359
           AASLA+EAQEKA+  GA ++ LL+KAK  G+GFSW+K SSQITT++QK   D+ PKVQ+A
Sbjct: 396 AASLAQEAQEKAEAGGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPDEDEKPKVQLA 455

Query: 360 TVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQ 419
           TVRGQAKAR L   KA VKQT    R+  KPK E PK       E+  EVRK FGGLF+Q
Sbjct: 456 TVRGQAKARNLAPNKAVVKQTPQ--RSAAKPKVEKPKQ-----TETPKEVRKVFGGLFKQ 508

Query: 420 ETIYVDDD 427
           ETIYVDDD
Sbjct: 509 ETIYVDDD 516

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542209|ref|XP_003539562.1| PREDICTED: uncharacterized protein LOC100790239 [Glycine max]

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 317/428 (74%), Positives = 363/428 (84%), Gaps = 8/428 (1%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKD  TVFVAGATGQAG+RIAQTLLREGFSVRAGVPEL +AQELARLAA YKI+S E+ K
Sbjct: 93  RKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELASAQELARLAAQYKIISNEQAK 152

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAV+S+FD+A++IAKAIGNA KVVVTIGPTE+GPT+EVS SDA QV+QAAQLAGVGHV
Sbjct: 153 RLNAVQSSFDNADTIAKAIGNASKVVVTIGPTENGPTTEVSASDALQVVQAAQLAGVGHV 212

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           A+IYD ++  ASTYNVLDG+SSFF+NLFSR+QPLT+ EFLQKVIETDV YTFIKTSLT+D
Sbjct: 213 AVIYDESSAGASTYNVLDGLSSFFSNLFSRSQPLTIQEFLQKVIETDVKYTFIKTSLTDD 272

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           FSPESSYNVVV  E S  ANDYKVAKS+IASLVADVFSNT VAENKVVKV++DP AP +R
Sbjct: 273 FSPESSYNVVVLGEGSDGANDYKVAKSKIASLVADVFSNTEVAENKVVKVYSDPGAPLKR 332

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK 300
           VDELFS I EDGRR AYAE   K KAE+EAR+AAEKA EA+E+A KLEEEVKKL +QEA+
Sbjct: 333 VDELFSPIPEDGRRKAYAEMQEKAKAEEEARVAAEKANEASESAKKLEEEVKKLLQQEAR 392

Query: 301 AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQK-STDQIPKVQIA 359
           AASLA+EAQEKA+ AGA ++ LL+KAK  G+GFSW+K SSQITT++QK   D+ PKVQ+A
Sbjct: 393 AASLAQEAQEKAEAAGASVENLLNKAKDFGAGFSWEKLSSQITTSIQKPDEDEKPKVQLA 452

Query: 360 TVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQ 419
           TVRGQAKAR L   KA V+QT+   R+  KPK E PK       E+  EVR  FGGLF+Q
Sbjct: 453 TVRGQAKARNLAPNKAVVRQTSQ--RSAGKPKVEKPKQA-----ETPKEVRNVFGGLFKQ 505

Query: 420 ETIYVDDD 427
           ETIYVDDD
Sbjct: 506 ETIYVDDD 513

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059444|ref|XP_002299849.1| predicted protein [Populus trichocarpa] gi|118487759|gb|ABK95703.1| unknown [Populus trichocarpa] gi|222847107|gb|EEE84654.1| predicted protein [Populus trichocarpa]

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 335/427 (78%), Positives = 369/427 (86%), Gaps = 7/427 (1%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKD GTVFVAGATGQAG+RIAQTLLREGFSVRAGVPELGAAQELARLAA YKI+S EE+K
Sbjct: 97  RKDPGTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGAAQELARLAAQYKIISNEEVK 156

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAVES F  AESIAKAIGNA KVVVTIGPTE+GPTSEVST DA QVI+AAQLAGVGHV
Sbjct: 157 RLNAVESTFQDAESIAKAIGNASKVVVTIGPTENGPTSEVSTLDALQVIEAAQLAGVGHV 216

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AIIY+GN  +ASTYNVLDG  SFFNNLFS++Q L+VPEFLQKVIETDV YTFIKTSLTED
Sbjct: 217 AIIYNGNIDSASTYNVLDGFKSFFNNLFSQSQ-LSVPEFLQKVIETDVKYTFIKTSLTED 275

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           FSPESSYNVVVSAE S  A+DYKVAKSQIA +VA+VFSNT+ AENKVV+VFT PSAP+R 
Sbjct: 276 FSPESSYNVVVSAERSTSADDYKVAKSQIALVVANVFSNTSAAENKVVEVFTSPSAPSRP 335

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK 300
           VDELFSAI EDGRR  YAEA AK KAE+EARIA EK   A+EAA KLEEEVKKLSEQEA 
Sbjct: 336 VDELFSAIPEDGRRKVYAEAFAKAKAEEEARIAVEK---ASEAAKKLEEEVKKLSEQEAN 392

Query: 301 AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIAT 360
           AASLAEEAQEKA+ AGA +++ L KAK IGSG SW+K SSQI+TAVQ ++++  KVQIAT
Sbjct: 393 AASLAEEAQEKAEAAGASVESFLGKAKEIGSGLSWEKISSQISTAVQTTSEKT-KVQIAT 451

Query: 361 VRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQE 420
           VRGQAKAR+LP  KA VK+   K  A+ KPKEE PK KAK+  ESK E+RK FGGLFQQE
Sbjct: 452 VRGQAKARSLPGQKAVVKRPGPKLFAL-KPKEE-PKPKAKESTESKTELRKMFGGLFQQE 509

Query: 421 TIYVDDD 427
           TIY+DDD
Sbjct: 510 TIYIDDD 516

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486499|gb|ABK95089.1| unknown [Populus trichocarpa]

 Score =  589 bits (1518), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 330/427 (77%), Positives = 368/427 (86%), Gaps = 5/427 (1%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKD GTVFVAGATGQAG+RIAQTLLREGFSVRAGVP+LG AQELA LAA YKI+S EE K
Sbjct: 92  RKDPGTVFVAGATGQAGIRIAQTLLREGFSVRAGVPQLGDAQELALLAAQYKIISNEESK 151

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAVES F   ESIAKAIGNA K VVTIGPTE+GPTSEVST DA QVI+AAQLAGVGHV
Sbjct: 152 RLNAVESTFQDTESIAKAIGNASKAVVTIGPTENGPTSEVSTLDALQVIEAAQLAGVGHV 211

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AIIYDGN  ++ST NVLDG  +FFNNLFS++Q L+VPEFLQKVIETDVSYTFIKTSLTED
Sbjct: 212 AIIYDGNPASSSTNNVLDGFKTFFNNLFSQSQ-LSVPEFLQKVIETDVSYTFIKTSLTED 270

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           FSPESSYNVVVSAE S    D+KVAKSQIAS+VA+VFSNT+VAENKVV+VFT+PSAP++ 
Sbjct: 271 FSPESSYNVVVSAEGSTGTGDFKVAKSQIASVVANVFSNTSVAENKVVEVFTNPSAPSKP 330

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK 300
           VDELFSAI EDGRR  YAEALAK KAE+E R+AAEKA EAAEAA KL +EVKKLSEQ AK
Sbjct: 331 VDELFSAIPEDGRRKVYAEALAKAKAEEETRVAAEKASEAAEAAKKLGDEVKKLSEQGAK 390

Query: 301 AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIAT 360
           AASLAEEAQ KA+ AGA ++  LSKA G+ SGFSW+K SSQ++TAVQ +++   KVQ+AT
Sbjct: 391 AASLAEEAQGKAEAAGASVENFLSKATGVSSGFSWEKLSSQLSTAVQTTSENT-KVQLAT 449

Query: 361 VRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQE 420
           VRGQAKAR+LP  KA VKQ + KPRA+ KPKEE PK KAK+  ESK EVRK FGGLFQQE
Sbjct: 450 VRGQAKARSLPVQKAVVKQPSPKPRAL-KPKEE-PKPKAKE-TESKAEVRKVFGGLFQQE 506

Query: 421 TIYVDDD 427
           TIY+DDD
Sbjct: 507 TIYIDDD 513

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558986|ref|XP_002520516.1| conserved hypothetical protein [Ricinus communis] gi|223540358|gb|EEF41929.1| conserved hypothetical protein [Ricinus communis]

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 322/430 (74%), Positives = 358/430 (83%), Gaps = 10/430 (2%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKD  TVFVAGATG AG+RIAQTLLREGFSVRAGV EL AAQ+LAR AA YKI+SKEE +
Sbjct: 91  RKDPSTVFVAGATGLAGIRIAQTLLREGFSVRAGVSELEAAQDLARFAAEYKIISKEESR 150

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAV+S F  AESIAKAIGNA KVVVTIGP E+GPTSEVS++DA QVIQAAQLAGVGHV
Sbjct: 151 RLNAVQSTFKDAESIAKAIGNASKVVVTIGPAENGPTSEVSSADALQVIQAAQLAGVGHV 210

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AIIYD N  + STYNVLDG++SFFNNLFS+ QPL++PEFLQKVIETDVSYTFIKTSLTED
Sbjct: 211 AIIYDSNIASGSTYNVLDGLTSFFNNLFSQYQPLSIPEFLQKVIETDVSYTFIKTSLTED 270

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           FSPE SYN+VVSAE S   +DYKVAKSQIAS+VA+VFSNTAVAENKVV++FTDPSAP++ 
Sbjct: 271 FSPECSYNLVVSAEGST-GSDYKVAKSQIASVVANVFSNTAVAENKVVEIFTDPSAPSKS 329

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK 300
           VDELFSAI EDGRR  YAE +AK KAE+EA+IAAEKAREAA+AA KLEEEVKKLSEQEAK
Sbjct: 330 VDELFSAIPEDGRRKVYAETIAKAKAEEEAKIAAEKAREAADAAKKLEEEVKKLSEQEAK 389

Query: 301 AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIAT 360
           AASLAEEAQEKA+ AG  M+ L SKAK I SG +WDK SSQ  TAVQ ++      QIAT
Sbjct: 390 AASLAEEAQEKAEAAGTSMENLFSKAKDISSGLTWDKLSSQFATAVQTTSG----TQIAT 445

Query: 361 VRGQAKARTLPSTKAAVKQTTAKPRAVT-KPKEELPKAKAKQI--NESKPEVRKAFGGLF 417
           VRGQAKAR+LP  KA VK+ T  PR  + K KEE       +    ESK EV+K FGGLF
Sbjct: 446 VRGQAKARSLPGQKAVVKRPT--PRFPSLKQKEETKAKPKPKAKETESKAEVKKMFGGLF 503

Query: 418 QQETIYVDDD 427
           QQETIYVDDD
Sbjct: 504 QQETIYVDDD 513

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434849|ref|XP_002282730.1| PREDICTED: uncharacterized protein LOC100246732 [Vitis vinifera]

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 323/427 (75%), Positives = 361/427 (84%), Gaps = 3/427 (0%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKD GTVFVAGATGQAG+RIAQ LLREGFSVRAGV +LGAAQELARL A YKI+S EE K
Sbjct: 93  RKDPGTVFVAGATGQAGIRIAQALLREGFSVRAGVSDLGAAQELARLGAKYKIISNEESK 152

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAVES+F  AESIAKAIGNA KVVVTIGP E+GPT+EV+  DA QVIQAA LAGVGHV
Sbjct: 153 RLNAVESSFQDAESIAKAIGNASKVVVTIGPGENGPTAEVTPLDALQVIQAADLAGVGHV 212

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AIIYD +   +STYNV+DGIS+FFNNLFSR+QPLTV EFLQKV+ETDVSYT I+T+LTED
Sbjct: 213 AIIYDESPFVSSTYNVIDGISTFFNNLFSRSQPLTVTEFLQKVVETDVSYTLIRTNLTED 272

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           FSPESSYNVVVSAE SV +NDYKVA SQIASLVA+VFSNTAVAENKVVKVFTDP AP++ 
Sbjct: 273 FSPESSYNVVVSAEGSVSSNDYKVATSQIASLVANVFSNTAVAENKVVKVFTDPGAPSKP 332

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK 300
             ELFSAI +DGRR AYAEALAK KAE+EA  A EKAREAAEAA KLE+EVKKLSEQE +
Sbjct: 333 AVELFSAIPKDGRREAYAEALAKAKAEEEALKATEKAREAAEAAKKLEQEVKKLSEQETR 392

Query: 301 AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIAT 360
           AA+LA+EA+EKA+ AGA ++  LSKAK +GSG SW+KFSSQ+  +VQK T++ PKVQIAT
Sbjct: 393 AATLADEAKEKAEAAGASVEVFLSKAKDLGSGLSWEKFSSQLAISVQKPTEK-PKVQIAT 451

Query: 361 VRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQE 420
           VRGQAKAR+L   KA VK  T       KPKEE PK K KQ  ESK EVRK FGGLF+QE
Sbjct: 452 VRGQAKARSLQPKKAVVKLPTFPRPPAFKPKEE-PKPKGKQ-PESKAEVRKVFGGLFKQE 509

Query: 421 TIYVDDD 427
           TIY+DDD
Sbjct: 510 TIYIDDD 516

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42565672|ref|NP_566886.2| protein plastid transcriptionally active 16 [Arabidopsis thaliana] gi|5541681|emb|CAB51187.1| putative protein [Arabidopsis thaliana] gi|332644683|gb|AEE78204.1| protein plastid transcriptionally active 16 [Arabidopsis thaliana]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 289/433 (66%), Positives = 354/433 (81%), Gaps = 16/433 (3%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           +KD GT+FVAGATGQAG+RIAQTLL+ GFSVRAGVP+LGAAQ+LAR+AA+YKILS +E+K
Sbjct: 88  KKDPGTIFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAAQDLARVAATYKILSNDEVK 147

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAV+S F  AESIAKAIGNA KVVVT+G TE+GP ++VSTSDA  V+QAA+LAGV HV
Sbjct: 148 RLNAVQSPFQDAESIAKAIGNATKVVVTVGATENGPDAQVSTSDALLVVQAAELAGVSHV 207

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AI+YDG T + STYNVLDGI+SFF NLF+++QPLT+ + ++KV +TDV+YT IKTSLTED
Sbjct: 208 AIVYDG-TISGSTYNVLDGITSFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTED 266

Query: 181 FSPESSYNVVVSAEASVDAND------YKVAKSQIASLVADVFSNTAVAENKVVKVFTDP 234
           FSPE +YNVVVSAE S   +       YKV K +IASLVAD+F+NTAVAENKVV+V TDP
Sbjct: 267 FSPEKAYNVVVSAEGSNSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDP 326

Query: 235 SAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKL 294
           SAP+R VDELFS I EDGRR  YA+A+A+E+AE+EA++AA+KAREAAEAA + E++++KL
Sbjct: 327 SAPSRPVDELFSVIPEDGRRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKL 386

Query: 295 SEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIP 354
           SE+EA+AASLAE+AQ+KAD  G  +D L +KAK I SG SW+K  SQ  TA+Q ++ + P
Sbjct: 387 SEKEAEAASLAEDAQQKADAVGVTVDGLFNKAKDISSGLSWNKLGSQFATAIQNAS-ETP 445

Query: 355 KVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFG 414
           KVQ+ATVRGQAKAR LP  KA VKQ  + P A +KPKEE PK   K       EVRK FG
Sbjct: 446 KVQVATVRGQAKARNLPPKKAVVKQRPSSPFA-SKPKEERPKKPEK-------EVRKVFG 497

Query: 415 GLFQQETIYVDDD 427
           GLF+QETIY+DDD
Sbjct: 498 GLFKQETIYIDDD 510

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297815840|ref|XP_002875803.1| PTAC16 [Arabidopsis lyrata subsp. lyrata] gi|297321641|gb|EFH52062.1| PTAC16 [Arabidopsis lyrata subsp. lyrata]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 288/433 (66%), Positives = 351/433 (81%), Gaps = 16/433 (3%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           +KD GT+FVAGATGQAG+RIAQTLL+ GFSVRAGVP+LGAAQ+LAR+AA+YKILS +E+K
Sbjct: 88  KKDPGTIFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAAQDLARVAATYKILSNDEVK 147

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAV+S F  AESIAKAIGNA KVVVT+G TE+GP ++VSTSDA  V+QAA+LAGV HV
Sbjct: 148 RLNAVQSPFQDAESIAKAIGNATKVVVTVGATENGPDAQVSTSDALLVVQAAELAGVSHV 207

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           AI+YDG + + STYNVLDGI+SFF NLF+++QPLT+ + ++KV +TDV+YT IKTSL ED
Sbjct: 208 AIVYDG-SISGSTYNVLDGITSFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLVED 266

Query: 181 FSPESSYNVVVSAEASVDAND------YKVAKSQIASLVADVFSNTAVAENKVVKVFTDP 234
           FSPE +YNVVVSAE S   +       YKV K +IASLVAD+F+NTAVAENKVV+V TDP
Sbjct: 267 FSPEKAYNVVVSAEGSNSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDP 326

Query: 235 SAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKL 294
           SAP+R V+ELFS I EDGRR  YA A+A+ +AE+EA++AAEKAREAAEAA + E++++KL
Sbjct: 327 SAPSRPVNELFSVIPEDGRRKVYAAAIARARAEEEAKVAAEKAREAAEAAKEFEKQMQKL 386

Query: 295 SEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIP 354
           SE+EA+AASLAE+AQ+KAD  G  +D L +KAK IGSG SW+K  SQ  TAVQ ++ + P
Sbjct: 387 SEKEAEAASLAEDAQQKADAVGITVDGLFNKAKDIGSGLSWNKLGSQFATAVQNAS-ETP 445

Query: 355 KVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFG 414
           KVQ+ATVRGQAKAR LP  KA VKQ  + P A +KPKEE  K   K       EVRK FG
Sbjct: 446 KVQVATVRGQAKARNLPPKKAVVKQRPSSPFA-SKPKEERQKKPEK-------EVRKVFG 497

Query: 415 GLFQQETIYVDDD 427
           GLF+QETIYVDDD
Sbjct: 498 GLFKQETIYVDDD 510

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357472863|ref|XP_003606716.1| hypothetical protein MTR_4g064750 [Medicago truncatula] gi|355507771|gb|AES88913.1| hypothetical protein MTR_4g064750 [Medicago truncatula]

 Score =  496 bits (1277), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 289/463 (62%), Positives = 338/463 (73%), Gaps = 58/463 (12%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           +KD  TVFVAGATGQAG+RIAQTLLREGFSVRAGVPELG+AQELARLA+ YKI+S EE  
Sbjct: 96  KKDPSTVFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQELARLASQYKIISNEE-- 153

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
                           KAIGNA KVVVTIG TE+GP +EVSTSDA QVIQAAQLAGVGHV
Sbjct: 154 ---------------TKAIGNASKVVVTIGLTENGPATEVSTSDALQVIQAAQLAGVGHV 198

Query: 121 AIIYD-GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTE 179
           A+IYD  N  + STYNVLDGISSFFNN+FS++QPL++ EFLQKV+ETDV YT IKT LT+
Sbjct: 199 AVIYDENNGVSTSTYNVLDGISSFFNNIFSKSQPLSIQEFLQKVVETDVKYTLIKTCLTD 258

Query: 180 DFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPAR 239
           DF+PESSYNVVV  E +  +NDYKV KS+IASLVADVFSNT VAENKVV+V++DP+AP R
Sbjct: 259 DFAPESSYNVVVLGEENTGSNDYKVTKSRIASLVADVFSNTQVAENKVVQVYSDPNAPLR 318

Query: 240 RVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEA 299
            VDELFS I EDGRR AYAE L K KAE+EAR+ AEKAREAA    KLEEE  KLS+QEA
Sbjct: 319 PVDELFSTIPEDGRRKAYAEILEKAKAEEEARVEAEKAREAAATTKKLEEEALKLSKQEA 378

Query: 300 KAASLAEEAQEKADVAGAPMDTLLSK---------------------------------- 325
           +A++L +E QEKA+ AG  ++ +L+K                                  
Sbjct: 379 QASNLVKEDQEKAEAAGTSVEDILNKAKAFRAGFSRQKLSSQVATTNQNPDEDEKPKLQQ 438

Query: 326 AKGIGSGFSWDKFSSQITTAVQK-STDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAKP 384
           AKG G+GFSW KFSSQ+ TA+QK   D+ PKVQ+ATVRGQAKAR+L   KA  KQTT   
Sbjct: 439 AKGFGAGFSWKKFSSQVATAIQKPDEDESPKVQVATVRGQAKARSLIPNKAVTKQTTTPR 498

Query: 385 RAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQETIYVDDD 427
            +V+K     PK + ++I E   EVRK FGGLF+QETIY+DDD
Sbjct: 499 NSVSK-----PKEEKRKIEEKPKEVRKVFGGLFKQETIYIDDD 536

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450918|ref|XP_004143209.1| PREDICTED: uncharacterized protein LOC101204541 [Cucumis sativus]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/488 (56%), Positives = 328/488 (67%), Gaps = 75/488 (15%)

Query: 1   RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
           RKDS TVFVAGATGQAG+R+AQTLLREGFSVRAGVPELGAAQELARLAA YK++S EE K
Sbjct: 99  RKDSNTVFVAGATGQAGIRLAQTLLREGFSVRAGVPELGAAQELARLAAKYKVISNEESK 158

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           RLNAVES+F  AE+IAKAIGNA KVVVTIG  E+GPTSEV+TSDA QVIQAAQLAGV HV
Sbjct: 159 RLNAVESSFQDAEAIAKAIGNASKVVVTIGVGENGPTSEVTTSDALQVIQAAQLAGVSHV 218

Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
           A++YDGN +++STYNVLDG+SSFFNNLFSR+QPL+V E LQK++ETD+ YTFIKT+L ED
Sbjct: 219 AVVYDGNASSSSTYNVLDGLSSFFNNLFSRSQPLSVVELLQKIVETDIGYTFIKTNLVED 278

Query: 181 FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR 240
           F+PE +YNVVV AE S  +NDYKVA+SQIASLVA VFSNTAVAENKVV+V++ PSAP+  
Sbjct: 279 FAPERAYNVVVQAEGSASSNDYKVAQSQIASLVAGVFSNTAVAENKVVEVYSSPSAPSSS 338

Query: 241 VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEE----EVKKLSE 296
           VD+LFS I  DGRR AYAEA   +   +E  I   +       ATK +E    + K+LSE
Sbjct: 339 VDQLFSVIPTDGRRQAYAEA-KAKAKAEEEAIRIAENAREEAEATKKQEVEAAKSKRLSE 397

Query: 297 QEA-------------------------KAASLAEEAQEK----------------ADVA 315
           + A                         KA   + E  +K                 D A
Sbjct: 398 KAATQPSSSSSSSSEESDQIAFFNSFLNKAKDFSSEQSQKLKKLSEKEPQETEEESPDTA 457

Query: 316 GAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKA 375
           G  ++   +KAKG GS   W+K S Q+    QK +++    QIATVRGQAKAR LP  KA
Sbjct: 458 GNLVNNFFNKAKGFGSAQPWEKLSFQL----QKPSEE-SNAQIATVRGQAKARALPPKKA 512

Query: 376 AVKQTTAKPRAVTKPKEELPKAKAKQINESKPE----------------VRKAFGGLFQQ 419
           +++QT    +  +KP   L     KQ   SKP+                VRK FGGLF+Q
Sbjct: 513 SIRQTQ---KTNSKPSFGL-----KQKENSKPKAAATAAAAAKEETKAEVRKVFGGLFKQ 564

Query: 420 ETIYVDDD 427
           ETIYVDD+
Sbjct: 565 ETIYVDDE 572

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	427
TAIR|locus:2102842	510	PTAC16 "plastid transcriptiona	0.976	0.817	0.593	1e-123
TAIR|locus:2087901	641	Tic62 "translocon at the inner	0.566	0.377	0.252	8.7e-12
TAIR|locus:2040854	280	AT2G34460 [Arabidopsis thalian	0.512	0.782	0.281	1.6e-08

TAIR|locus:2102842 PTAC16 "plastid transcriptionally active 16" [Arabidopsis thaliana (taxid:3702)]

 Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
 Identities = 257/433 (59%), Positives = 311/433 (71%)

Query:     1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
             +KD GT+FVAGATGQAG+RIAQTLL+ GFSVRAGVP+LGAAQ+LAR+AA+YKILS +E+K
Sbjct:    88 KKDPGTIFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAAQDLARVAATYKILSNDEVK 147

Query:    61 RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
             RLNAV+S F  AESIAKAIGNA KVVVT+G TE+GP ++VSTSDA  V+QAA+LAGV HV
Sbjct:   148 RLNAVQSPFQDAESIAKAIGNATKVVVTVGATENGPDAQVSTSDALLVVQAAELAGVSHV 207

Query:   121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
             AI+YDG T + STYNVLDGI+SFF NLF+++QPLT+ + ++KV +TDV+YT IKTSLTED
Sbjct:   208 AIVYDG-TISGSTYNVLDGITSFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTED 266

Query:   181 FSPESSYNVVVSAEASVDAND------YKVAKSQIASLVADVFSNTAVAENKVVKVFTDP 234
             FSPE +YNVVVSAE S   +       YKV K +IASLVAD+F+NTAVAENKVV+V TDP
Sbjct:   267 FSPEKAYNVVVSAEGSNSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDP 326

Query:   235 SAPARRVDELFSAIAEDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 294
             SAP+R VDELFS I EDGR                                         
Sbjct:   327 SAPSRPVDELFSVIPEDGRRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKL 386

Query:   295 SEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIP 354
             SE+EA+AASLAE+AQ+KAD  G  +D L +KAK I SG SW+K  SQ  TA+Q +++  P
Sbjct:   387 SEKEAEAASLAEDAQQKADAVGVTVDGLFNKAKDISSGLSWNKLGSQFATAIQNASET-P 445

Query:   355 KVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTXXXXXXXXXXXXQINESKPEVRKAFG 414
             KVQ+ATVRGQAKAR LP  KA VKQ  + P A              +  + + EVRK FG
Sbjct:   446 KVQVATVRGQAKARNLPPKKAVVKQRPSSPFA--------SKPKEERPKKPEKEVRKVFG 497

Query:   415 GLFQQETIYVDDD 427
             GLF+QETIY+DDD
Sbjct:   498 GLFKQETIYIDDD 510

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009295 "nucleoid" evidence=IDA

GO:0009508 "plastid chromosome" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0009637 "response to blue light" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010114 "response to red light" evidence=RCA

GO:0010218 "response to far red light" evidence=RCA

GO:0015979 "photosynthesis" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0034660 "ncRNA metabolic process" evidence=RCA

TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
 Identities = 64/253 (25%), Positives = 118/253 (46%)

Query:     2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEE--- 58
             K+   VFVAGATG+ G R  + LL+ GF VRAGV     A  L +     K+ + +E   
Sbjct:    79 KEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQ 138

Query:    59 -LKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV 117
              +++L  VE + +  +SI  A+GNA  ++  IG +E    S+++       +    L   
Sbjct:   139 PVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEK-EISDITGPYRIDYLATKNLVDA 197

Query:   118 GHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSL 177
                A + +     +   N   G  +   NLF         +  + +IE+ ++Y  ++   
Sbjct:   198 ATSAKVNNFILVTSLGTNKF-GFPAAILNLFW-GVLCWKRKAEEALIESGLNYAIVRPGG 255

Query:   178 TEDFSPESSYNVVVSAEASVDANDY--KVAKSQIASLVADVFSNTAVAENKVVKVFTDPS 235
              E   P  +Y    +   ++D   +  +V+  Q+A L+A +  N  ++ +K+V+V  + +
Sbjct:   256 ME--RPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKIVEVVAETT 313

Query:   236 APARRVDELFSAI 248
             AP   +++L   I
Sbjct:   314 APLTPIEKLLEKI 326

GO:0000166 "nucleotide binding" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

GO:0019684 "photosynthesis, light reaction" evidence=RCA

TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 71/252 (28%), Positives = 120/252 (47%)

Query:     7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
             VFVAGATGQ G RI + LL  GF+V+AGV ++  A+       S+K     ++ R +  E
Sbjct:    49 VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAK------TSFKDDPSLQIVRADVTE 102

Query:    67 SNFDSAESIAKAIGNAGKVVV-TIG--PTEDGPTS-EVSTSDAFQVIQAAQLAGVGHVAI 122
                   + +A+ IG+  + V+   G  P  D  T  +V       ++ A +  GV    +
Sbjct:   103 G----PDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVL 158

Query:   123 IYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQ--KVIE-TDVSYTFIKTSLTE 179
             +       A+   +L+  +  F NLF     LT+   LQ  K I+ + ++YT ++    +
Sbjct:   159 VSSILVNGAAMGQILNP-AYLFLNLFG----LTLVAKLQAEKYIKKSGINYTIVRPGGLK 213

Query:   180 DFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN---KVVKVFTDPSA 236
             +  P    NVV+  E ++    Y+ + S+   LVA+V     + E    KVV++     A
Sbjct:   214 NDPPTG--NVVMEPEDTL----YEGSISR--DLVAEVAVEALLQEESSFKVVEIVARAEA 265

Query:   237 PARRVDELFSAI 248
             P R   +LF+++
Sbjct:   266 PKRSYKDLFASV 277


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.125   0.330    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      427       374   0.00087  117 3  10 23  0.47    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  258 KB (2138 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  43.34u 0.15s 43.49t   Elapsed:  00:00:02
  Total cpu time:  43.34u 0.16s 43.50t   Elapsed:  00:00:02
  Start:  Fri May 10 16:29:17 2013   End:  Fri May 10 16:29:19 2013

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	427
PLN03209	576	PLN03209, PLN03209, translocon at the inner envelo	7e-12
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	4e-09
PLN00141	251	PLN00141, PLN00141, Tic62-NAD(P)-related group II	9e-06
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	2e-05
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	3e-05
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	5e-05
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-04
PRK05035	695	PRK05035, PRK05035, electron transport complex pro	8e-04
PRK05035	695	PRK05035, PRK05035, electron transport complex pro	0.001
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	0.002
COG3064	387	COG3064, TolA, Membrane protein involved in colici	0.002
pfam05368	232	pfam05368, NmrA, NmrA-like family	0.003
PRK09510	387	PRK09510, tolA, cell envelope integrity inner memb	0.003
PTZ00121	2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.004
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	0.004

>gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional

 Score = 66.9 bits (163), Expect = 7e-12
 Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 37/265 (13%)

Query: 2   KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSK--EEL 59
           KD    FVAGATG+ G R  + LL+ GF VRAGV     A+ L +     K+  +  + +
Sbjct: 78  KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPV 137

Query: 60  KRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTED------GPTSEVSTSDAFQVIQAAQ 113
           ++L  VE + +  + I  A+GNA  V+  IG +E       GP   +       ++ AA 
Sbjct: 138 EKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFDVTGPY-RIDYLATKNLVDAAT 196

Query: 114 LAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLF------SRNQPLTVPEFLQKVIETD 167
           +A V H  ++     T+  T  V  G  +   NLF       R          + +I + 
Sbjct: 197 VAKVNHFILV-----TSLGTNKV--GFPAAILNLFWGVLCWKRKAE-------EALIASG 242

Query: 168 VSYTFIKTSLTEDFSPESSY----NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVA 223
           + YT ++    E   P  +Y    N+ +S E ++     +V+  Q+A L+A +  N  ++
Sbjct: 243 LPYTIVRPGGME--RPTDAYKETHNLTLSEEDTLFGG--QVSNLQVAELMACMAKNRRLS 298

Query: 224 ENKVVKVFTDPSAPARRVDELFSAI 248
             KVV+V  + +AP   ++EL + I
Sbjct: 299 YCKVVEVIAETTAPLTPMEELLAKI 323

Length = 576

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 47/226 (20%), Positives = 87/226 (38%), Gaps = 32/226 (14%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
            V V GATG+ G  + + LL  G+ VRA V +   A++L    A               V
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGA-------------EVV 47

Query: 66  ESNFDSAESIAKAIGNAGKVVVTIG--PTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
             +   AES+A A+     V+   G        T  V       +I AA+ AGV    ++
Sbjct: 48  VGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLV 107

Query: 124 YDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIK-TSLTEDFS 182
                ++         + +    L ++       +    +  + + YT ++   LT+D  
Sbjct: 108 -----SSIGADKPSHPLEALGPYLDAKR------KAEDYLRASGLDYTIVRPGGLTDD-- 154

Query: 183 PESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVV 228
           P  +  VV+  + +       ++++ +A ++A+     A A  K  
Sbjct: 155 PAGTGRVVLGGDGTRLDG--PISRADVAEVLAEALDTPA-AIGKTF 197

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional

 Score = 46.4 bits (110), Expect = 9e-06
 Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 33/257 (12%)

Query: 2   KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKR 61
             + TVFVAGATG+ G RI + LL +GF+V+AGV ++  A+       S +I+  +  + 
Sbjct: 15  VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTE- 73

Query: 62  LNAVESNFDSAESIAKAIGNAGKVVVT---IGPTEDGPTS-EVSTSDAFQVIQAAQLAGV 117
                     ++ + +AIG+    V+       + D     +V       +++A + AGV
Sbjct: 74  ---------GSDKLVEAIGDDSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGV 124

Query: 118 GHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK---VIETDVSYTFIK 174
               ++       A+   +L+    F  NLF     LT+   LQ    + ++ ++YT ++
Sbjct: 125 TRFILVSSILVNGAAMGQILNPAYIFL-NLFG----LTLVAKLQAEKYIRKSGINYTIVR 179

Query: 175 TSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN---KVVKVF 231
                +  P  + N+V+  E ++    Y+ + S+    VA+V     +      KVV++ 
Sbjct: 180 PGGLTNDPP--TGNIVMEPEDTL----YEGSISR--DQVAEVAVEALLCPESSYKVVEIV 231

Query: 232 TDPSAPARRVDELFSAI 248
               AP R   +LF++I
Sbjct: 232 ARADAPKRSYKDLFASI 248

Length = 251

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 47.1 bits (111), Expect = 2e-05
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 21/170 (12%)

Query: 250  EDGRRAAYAEALAKEKAEKEARIA-----AEKAREAAEAATKLEEEVKKLSEQEAKA--A 302
            E+ R A +A   A  KAE EAR A     AE+ ++A EA  K  EE KK  E + KA  A
Sbjct: 1258 EEARMAHFARRQAAIKAE-EARKADELKKAEEKKKADEA--KKAEEKKKADEAKKKAEEA 1314

Query: 303  SLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVR 362
              A+EA++KA+ A    D    KA+            ++      K+  +    +     
Sbjct: 1315 KKADEAKKKAEEAKKKADAAKKKAE-----------EAKKAAEAAKAEAEAAADEAEAAE 1363

Query: 363  GQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKA 412
             +A+A      +A  K   AK +A  K K +  K KA++  +   E++KA
Sbjct: 1364 EKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA 1413

Length = 2084

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           + + GATG  G  +A+ LL +G  V            L R     K LSKE+ + +  VE
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTL----------LVRNT---KRLSKEDQEPVAVVE 47

Query: 67  SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQ-VIQAAQLAGVGHVAII 123
            +    +S++ A+     V+   G   D         +  + V++AA+ AGV H   I
Sbjct: 48  GDLRDLDSLSDAVQGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFI 105

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 32/177 (18%), Positives = 54/177 (30%), Gaps = 29/177 (16%)

Query: 9   VAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN 68
           V GATG+ G R+ + LL  G  V A       A                    +  V+ +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAP----------------GVTPVQKD 46

Query: 69  FDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNT 128
                 +A+A+     VV   G   D             ++ AA  AGV  + ++     
Sbjct: 47  LFDLADLAEALAGVDAVVDAFGARPDDSDG------VKHLLDAAARAGVRRIVVV----- 95

Query: 129 TAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPES 185
           +AA  Y    G     +               + +  + + +T +       F  E 
Sbjct: 96  SAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIV--RPGALFDEEG 150

Length = 182

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 18/113 (15%)

Query: 9   VAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN 68
           V GATG+ G  + + LL +  SV A V     A+  A      +               +
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGVEVRQG-------------D 49

Query: 69  FDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA 121
           +D  E++ +A     ++++      +    +         I AA+ AGV H+ 
Sbjct: 50  YDDPETLERAFEGVDRLLLISPSDLEDRIQQHKN-----FIDAAKQAGVKHIV 97

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional

 Score = 41.5 bits (98), Expect = 8e-04
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 29/169 (17%)

Query: 247 AIAEDGRRAAYA----EA----LAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQE 298
           AI ++ ++A  A    EA    L +EKA +EAR        AA+    +   + ++  ++
Sbjct: 440 AIEQEKKKAEEAKARFEARQARLEREKAAREARHKKAAEARAAKDKDAVAAALARVKAKK 499

Query: 299 AKAAS-LAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQ 357
           A A   +  +A  + D +         KA+         +       A   +  +   V 
Sbjct: 500 AAATQPIVIKAGARPDNSAVIAAREARKAQA--------RARQAEKQAAAAADPKKAAVA 551

Query: 358 IATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPK-----EELPKAKAKQ 401
            A  R +AK       KAA +   A+      PK       + +AKAK+
Sbjct: 552 AAIARAKAK-------KAAQQAANAEAEEEVDPKKAAVAAAIARAKAKK 593

Length = 695

>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional

 Score = 41.1 bits (97), Expect = 0.001
 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 14/203 (6%)

Query: 205 AKSQIASLVADVFSNTAVAENKVVKVFTDPSAPAR-RVDELFSAIAEDGRRAAYAEALAK 263
           AK   A+    + +      + V+       A AR R  E  +A A D ++AA A A+A+
Sbjct: 497 AKKAAATQPIVIKAGARPDNSAVIAAREARKAQARARQAEKQAAAAADPKKAAVAAAIAR 556

Query: 264 EKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAKAASLAEEAQEKADVAGAPMDTLL 323
            KA+K A+  A  A    E   K       ++  +AK A+    + E  +          
Sbjct: 557 AKAKKAAQ-QAANAEAEEEVDPKKAAVAAAIARAKAKKAAQQAASAEPEEQVAEVDPKKA 615

Query: 324 SKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAK 383
           + A  I    +  K + Q   A  +      K  +A    +AKAR     KAA +Q  A+
Sbjct: 616 AVAAAIAR--AKAKKAEQQANAEPEEPVDPRKAAVAAAIARAKAR-----KAAQQQANAE 668

Query: 384 PRAVTKPKEE-----LPKAKAKQ 401
           P     PK+      + +AKAK+
Sbjct: 669 PEEAEDPKKAAVAAAIARAKAKK 691

Length = 695

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 45/179 (25%)

Query: 7   VFVAGATGQAGVRIAQTLL-REGFSVRAGV--PELGAAQELARLAASYKILSKEELKRLN 63
           + V GATG+ G  + + LL   GF VRA    P   AA+ LA                  
Sbjct: 1   ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPGVE------------- 47

Query: 64  AVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
            V+ + D  ES+  A+     V +     E G   E++      V+ AA+ AGV H   +
Sbjct: 48  VVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIAQGKN--VVDAAKRAGVQH--FV 103

Query: 124 YDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK------VIETDVSYTFIKTS 176
           +       S+  V D               L VP F  K      +  + +  T ++ +
Sbjct: 104 F-------SS--VPDV----------EKLTLAVPHFDSKAEVEEYIRASGLPATILRPA 143

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane]

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 247 AIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAKAASLAE 306
           A A +  +A    A AK+KAE EA+ AAEKA+  AEA  K E++ +  +E++A A     
Sbjct: 177 AKAAEEAKAKAEAAAAKKKAEAEAKAAAEKAKAEAEAKAKAEKKAEAAAEEKAAAEKKKA 236

Query: 307 EAQEKADVAGA 317
            A+ KAD A A
Sbjct: 237 AAKAKADKAAA 247

Length = 387

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 20/116 (17%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGV--PELGAAQELARLAASYKILSKEELKRLNA 64
           + V GATG  G  + +  L+ G  VRA V  P+   A+ L                    
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRDPKSELAKSLKAAGV-------------EL 47

Query: 65  VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
           VE + D  ES+ +A+     V    G             D  ++  AA+ AGV H 
Sbjct: 48  VEGDLDDHESLVEALKGVDVVFSVTGFWLS-----KEIEDGKKLADAAKEAGVKHF 98

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional

 Score = 39.4 bits (92), Expect = 0.003
 Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 236 APARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAE-KAREAAEAATKLEEEVKKL 294
           A A+R        A + ++ A AEA  K  AE + +  AE  A+ AAEA  K E E KK 
Sbjct: 151 AEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKK 210

Query: 295 SEQEAKAASLAEEAQEKADVAGA 317
           +  EAK  + AE     A  A  
Sbjct: 211 AAAEAKKKAAAEAKAAAAKAAAE 233

Length = 387

>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional

 Score = 39.4 bits (91), Expect = 0.004
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)

Query: 238  ARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEE------EV 291
            AR+ DEL  A  E+ ++A  A+   ++K   EA+  AE+A++A EA  K EE        
Sbjct: 1277 ARKADELKKA--EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAA 1334

Query: 292  KKLSEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTD 351
            KK +E+  KA   AE A+ +A+ A    +    KA+         K  +    A +K  +
Sbjct: 1335 KKKAEEAKKA---AEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKAD---AAKKKAE 1388

Query: 352  QIPKVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRK 411
            +  K   A  + +   +     K   K   AK +A    K+   K KA +  +   E +K
Sbjct: 1389 EKKKADEAKKKAEEDKKKADELK---KAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK 1445

Query: 412  A 412
            A
Sbjct: 1446 A 1446

Length = 2084

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 19/121 (15%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           V V GATG  G R+   LL+EG  VRA          L R           E  R+  V 
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRA----------LVRSPEKLADRPWSE--RVTVVR 48

Query: 67  SNFDSAESIAKAIGNAGKV---VVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
            + +  ES+  A+         V ++G   D   ++   +  F   +AA+ AGV    II
Sbjct: 49  GDLEDPESLRAALEGIDTAYYLVHSMGSGGDFEEADRRAARNFA--RAARAAGVKR--II 104

Query: 124 Y 124
           Y
Sbjct: 105 Y 105

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	427
CHL00194	317	ycf39 Ycf39; Provisional	99.96
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.94
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.94
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.93
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.93
PLN02427	386	UDP-apiose/xylose synthase	99.92
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.92
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.92
PLN02214	342	cinnamoyl-CoA reductase	99.91
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.9
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.9
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.9
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.9
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.9
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.9
PLN02650	351	dihydroflavonol-4-reductase	99.89
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.89
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.89
PLN02572	442	UDP-sulfoquinovose synthase	99.89
PLN03209	576	translocon at the inner envelope of chloroplast su	99.89
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.89
PLN02206	442	UDP-glucuronate decarboxylase	99.89
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.89
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.89
PLN00198	338	anthocyanidin reductase; Provisional	99.89
PLN02686	367	cinnamoyl-CoA reductase	99.88
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.88
PLN02583	297	cinnamoyl-CoA reductase	99.88
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.88
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.88
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.88
PLN02260	668	probable rhamnose biosynthetic enzyme	99.87
PLN00016	378	RNA-binding protein; Provisional	99.87
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.87
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.87
PLN02240	352	UDP-glucose 4-epimerase	99.87
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.86
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.86
PLN02653	340	GDP-mannose 4,6-dehydratase	99.86
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.86
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.86
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.86
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.86
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.85
PRK07201	657	short chain dehydrogenase; Provisional	99.85
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.85
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.85
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.83
PLN02996	491	fatty acyl-CoA reductase	99.83
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.83
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.83
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.82
PRK05865	854	hypothetical protein; Provisional	99.82
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.81
COG2910	211	Putative NADH-flavin reductase [General function p	99.79
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.78
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.78
PRK06482	276	short chain dehydrogenase; Provisional	99.77
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.76
PLN02778	298	3,5-epimerase/4-reductase	99.76
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.76
PRK12320	699	hypothetical protein; Provisional	99.76
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.75
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.74
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.74
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.74
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.74
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.73
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.73
PRK08263	275	short chain dehydrogenase; Provisional	99.73
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.72
PRK07806	248	short chain dehydrogenase; Provisional	99.72
PRK05875	276	short chain dehydrogenase; Provisional	99.72
PRK06180	277	short chain dehydrogenase; Provisional	99.71
PLN02503	605	fatty acyl-CoA reductase 2	99.71
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.71
PRK06182	273	short chain dehydrogenase; Validated	99.71
PRK06914	280	short chain dehydrogenase; Provisional	99.71
PRK07074	257	short chain dehydrogenase; Provisional	99.7
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.7
PRK12828	239	short chain dehydrogenase; Provisional	99.7
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.7
PRK07326	237	short chain dehydrogenase; Provisional	99.69
PRK08219	227	short chain dehydrogenase; Provisional	99.69
PRK12746	254	short chain dehydrogenase; Provisional	99.69
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.68
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
PRK07774	250	short chain dehydrogenase; Provisional	99.68
PRK07775	274	short chain dehydrogenase; Provisional	99.68
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.68
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.67
PRK12829	264	short chain dehydrogenase; Provisional	99.67
PRK07825	273	short chain dehydrogenase; Provisional	99.67
PRK10538	248	malonic semialdehyde reductase; Provisional	99.67
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK12827	249	short chain dehydrogenase; Provisional	99.67
PRK09135	249	pteridine reductase; Provisional	99.67
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.67
PRK09186	256	flagellin modification protein A; Provisional	99.67
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.66
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.66
PRK06138	252	short chain dehydrogenase; Provisional	99.66
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.66
PRK07454	241	short chain dehydrogenase; Provisional	99.66
PRK07067	257	sorbitol dehydrogenase; Provisional	99.66
PRK12939	250	short chain dehydrogenase; Provisional	99.66
PRK07060	245	short chain dehydrogenase; Provisional	99.65
PRK09291	257	short chain dehydrogenase; Provisional	99.65
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.65
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.64
PRK05876	275	short chain dehydrogenase; Provisional	99.63
PRK05993	277	short chain dehydrogenase; Provisional	99.63
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.63
PRK08267	260	short chain dehydrogenase; Provisional	99.62
PLN02260	668	probable rhamnose biosynthetic enzyme	99.62
PRK07577	234	short chain dehydrogenase; Provisional	99.62
PRK06181	263	short chain dehydrogenase; Provisional	99.62
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.62
PRK05650	270	short chain dehydrogenase; Provisional	99.62
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.61
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.61
PRK05866	293	short chain dehydrogenase; Provisional	99.61
PRK07109	334	short chain dehydrogenase; Provisional	99.61
PLN02253	280	xanthoxin dehydrogenase	99.61
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.61
PRK07024	257	short chain dehydrogenase; Provisional	99.61
PRK07890	258	short chain dehydrogenase; Provisional	99.6
PRK07102	243	short chain dehydrogenase; Provisional	99.6
PRK06841	255	short chain dehydrogenase; Provisional	99.6
PRK06179	270	short chain dehydrogenase; Provisional	99.6
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.6
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.6
PRK05867	253	short chain dehydrogenase; Provisional	99.59
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.59
PRK08017	256	oxidoreductase; Provisional	99.59
PRK07814	263	short chain dehydrogenase; Provisional	99.59
PRK07063	260	short chain dehydrogenase; Provisional	99.59
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.59
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.59
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.58
PRK06194	287	hypothetical protein; Provisional	99.58
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.58
PRK12743	256	oxidoreductase; Provisional	99.58
PRK06128	300	oxidoreductase; Provisional	99.58
PRK06500	249	short chain dehydrogenase; Provisional	99.58
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.58
PRK06139	330	short chain dehydrogenase; Provisional	99.58
PRK12937	245	short chain dehydrogenase; Provisional	99.58
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.58
PRK08628	258	short chain dehydrogenase; Provisional	99.57
PRK05693	274	short chain dehydrogenase; Provisional	99.57
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.57
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.57
PRK12742	237	oxidoreductase; Provisional	99.57
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.57
PRK05717	255	oxidoreductase; Validated	99.57
PRK08251	248	short chain dehydrogenase; Provisional	99.57
PRK08265	261	short chain dehydrogenase; Provisional	99.57
PRK08264	238	short chain dehydrogenase; Validated	99.57
PRK08643	256	acetoin reductase; Validated	99.57
PRK06701	290	short chain dehydrogenase; Provisional	99.57
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.57
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.57
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.57
PRK06101	240	short chain dehydrogenase; Provisional	99.56
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.56
PRK06123	248	short chain dehydrogenase; Provisional	99.56
PRK09134	258	short chain dehydrogenase; Provisional	99.56
PRK07478	254	short chain dehydrogenase; Provisional	99.56
PRK07035	252	short chain dehydrogenase; Provisional	99.56
PRK06398	258	aldose dehydrogenase; Validated	99.55
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.55
PRK07904	253	short chain dehydrogenase; Provisional	99.55
PRK06114	254	short chain dehydrogenase; Provisional	99.55
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.55
PRK06172	253	short chain dehydrogenase; Provisional	99.55
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.55
PRK12744	257	short chain dehydrogenase; Provisional	99.54
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.54
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.54
PRK08589	272	short chain dehydrogenase; Validated	99.54
PRK06057	255	short chain dehydrogenase; Provisional	99.54
PRK06949	258	short chain dehydrogenase; Provisional	99.54
PRK06196	315	oxidoreductase; Provisional	99.54
PRK09072	263	short chain dehydrogenase; Provisional	99.54
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.53
PRK07856	252	short chain dehydrogenase; Provisional	99.53
PRK08339	263	short chain dehydrogenase; Provisional	99.53
PRK07576	264	short chain dehydrogenase; Provisional	99.53
PRK07041	230	short chain dehydrogenase; Provisional	99.52
PRK12747	252	short chain dehydrogenase; Provisional	99.52
PRK09242	257	tropinone reductase; Provisional	99.52
PRK08226	263	short chain dehydrogenase; Provisional	99.52
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.51
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.51
PRK07069	251	short chain dehydrogenase; Validated	99.51
PRK06523	260	short chain dehydrogenase; Provisional	99.51
PRK08324	681	short chain dehydrogenase; Validated	99.51
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.5
PRK06198	260	short chain dehydrogenase; Provisional	99.5
PRK07677	252	short chain dehydrogenase; Provisional	99.49
PRK07985	294	oxidoreductase; Provisional	99.49
PRK07062	265	short chain dehydrogenase; Provisional	99.49
PRK08278	273	short chain dehydrogenase; Provisional	99.49
PRK07832	272	short chain dehydrogenase; Provisional	99.48
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.48
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.48
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.48
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.48
PRK05872	296	short chain dehydrogenase; Provisional	99.47
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.47
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.46
PRK06197	306	short chain dehydrogenase; Provisional	99.46
PRK06483	236	dihydromonapterin reductase; Provisional	99.46
PRK05855	582	short chain dehydrogenase; Validated	99.46
PRK07201	657	short chain dehydrogenase; Provisional	99.46
PRK08177	225	short chain dehydrogenase; Provisional	99.46
PRK06924	251	short chain dehydrogenase; Provisional	99.45
PRK06953	222	short chain dehydrogenase; Provisional	99.45
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.44
PRK06125	259	short chain dehydrogenase; Provisional	99.44
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.44
PRK07831	262	short chain dehydrogenase; Provisional	99.44
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.44
PRK07023	243	short chain dehydrogenase; Provisional	99.44
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.43
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.43
PRK07578	199	short chain dehydrogenase; Provisional	99.43
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.43
PRK08703	239	short chain dehydrogenase; Provisional	99.43
PRK06484	520	short chain dehydrogenase; Validated	99.43
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.42
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.42
PRK07791	286	short chain dehydrogenase; Provisional	99.42
PRK12367	245	short chain dehydrogenase; Provisional	99.41
PRK05884	223	short chain dehydrogenase; Provisional	99.41
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.41
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.41
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.4
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.4
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.39
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.39
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.39
PRK05854	313	short chain dehydrogenase; Provisional	99.38
PRK06940	275	short chain dehydrogenase; Provisional	99.37
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.36
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.33
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.32
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.32
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.32
PLN02780	320	ketoreductase/ oxidoreductase	99.32
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.31
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.31
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.31
PRK06484	520	short chain dehydrogenase; Validated	99.3
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.3
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.3
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.29
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.29
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.27
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.27
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.26
PRK05599	246	hypothetical protein; Provisional	99.25
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.22
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.15
PRK08862	227	short chain dehydrogenase; Provisional	99.14
PRK08303	305	short chain dehydrogenase; Provisional	99.11
PLN00015	308	protochlorophyllide reductase	99.06
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.06
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.03
KOG1208	314	consensus Dehydrogenases with different specificit	99.01
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.97
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.97
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.94
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.94
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.92
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.91
PRK08309	177	short chain dehydrogenase; Provisional	98.91
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	98.89
COG1028	251	FabG Dehydrogenases with different specificities (	98.89
KOG2774	366	consensus NAD dependent epimerase [General functio	98.88
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	98.86
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.78
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.76
KOG0725	270	consensus Reductases with broad range of substrate	98.76
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	98.75
PRK06720	169	hypothetical protein; Provisional	98.73
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.64
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.6
PTZ00325	321	malate dehydrogenase; Provisional	98.58
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.49
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.42
PLN00106	323	malate dehydrogenase	98.37
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.33
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.3
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.29
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.28
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.25
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.18
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.14
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.11
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	98.08
PRK05086	312	malate dehydrogenase; Provisional	98.07
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	98.07
PRK09620	229	hypothetical protein; Provisional	98.0
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	97.98
PRK14982	340	acyl-ACP reductase; Provisional	97.88
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.83
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.8
COG3268	382	Uncharacterized conserved protein [Function unknow	97.79
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.76
PRK09496	453	trkA potassium transporter peripheral membrane com	97.75
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.72
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	97.65
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.64
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.62
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	97.59
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.59
PRK04148	134	hypothetical protein; Provisional	97.52
PRK09496	453	trkA potassium transporter peripheral membrane com	97.5
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.49
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.47
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	97.46
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.42
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	97.42
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	97.38
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.37
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.36
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.35
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.29
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.29
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.28
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.27
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.22
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.15
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	97.15
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.15
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.15
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.13
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.11
PRK10669	558	putative cation:proton antiport protein; Provision	97.08
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.05
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.03
PLN02383	344	aspartate semialdehyde dehydrogenase	97.02
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.01
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.0
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.98
PRK06223	307	malate dehydrogenase; Reviewed	96.97
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.95
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.93
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.93
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.93
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.9
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.89
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.89
PRK08655	437	prephenate dehydrogenase; Provisional	96.88
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.86
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.82
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.82
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.81
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.81
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.8
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.8
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.77
PRK08057	248	cobalt-precorrin-6x reductase; Reviewed	96.77
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.75
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.75
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.73
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	96.71
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.71
PTZ00117	319	malate dehydrogenase; Provisional	96.7
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.68
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.67
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.66
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.63
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.62
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.61
PLN02602	350	lactate dehydrogenase	96.61
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.61
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.59
PRK05442	326	malate dehydrogenase; Provisional	96.59
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.59
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.57
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.53
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.53
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.5
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.49
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.49
PRK07417	279	arogenate dehydrogenase; Reviewed	96.48
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.48
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.45
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.44
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.44
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.44
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.43
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.43
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.43
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.42
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.4
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.39
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.38
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.37
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.37
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.35
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.34
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.33
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.32
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.3
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	96.3
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.3
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	96.29
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.29
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.28
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.26
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.25
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.24
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.24
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.24
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.22
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.21
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.2
PLN02688	266	pyrroline-5-carboxylate reductase	96.2
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.19
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	96.19
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	96.18
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.15
PLN00203	519	glutamyl-tRNA reductase	96.14
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.14
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.13
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.12
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.12
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.1
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.07
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.06
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.06
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	96.04
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.03
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.03
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	95.99
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	95.99
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.99
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	95.99
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	95.98
TIGR02717	447	AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP	95.98
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	95.96
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.95
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	95.94
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.94
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	95.91
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	95.91
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.88
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.87
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	95.85
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.85
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.85
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	95.82
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.82
PRK08328	231	hypothetical protein; Provisional	95.81
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.79
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.78
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.78
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	95.77
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.74
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.74
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	95.73
PRK10537	393	voltage-gated potassium channel; Provisional	95.72
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.7
PLN02256	304	arogenate dehydrogenase	95.69
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	95.69
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.68
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.68
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.68
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	95.66
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.64
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.64
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.62
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	95.61
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.6
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	95.56
KOG0409	327	consensus Predicted dehydrogenase [General functio	95.53
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	95.52
PRK13304	265	L-aspartate dehydrogenase; Reviewed	95.48
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.46
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.46
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.46
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	95.42
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.42
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.4
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	95.4
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	95.39
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.37
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.34
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	95.32
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.32
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.32
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.32
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.31

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.96  E-value=2.9e-27  Score=234.94  Aligned_cols=214  Identities=15%  Similarity=0.210  Sum_probs=155.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+|||||||+|++|+++|+++||+|++++|+.++...+...             +++++.+|++|++++.++++++|+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~-------------~v~~v~~Dl~d~~~l~~al~g~d~   67 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW-------------GAELVYGDLSLPETLPPSFKGVTA   67 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc-------------CCEEEECCCCCHHHHHHHHCCCCE
Confidence            5899999999999999999999999999999997654433322             345999999999999999999999


Q ss_pred             EEEccCCCCCC--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           85 VVVTIGPTEDG--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        85 Vi~~ag~~~~~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      |||+++....+  ...++|..++.+++++|+++|++|||++||.+..   .+    +..     .+...+ ...|+   .
T Consensus        68 Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~---~~----~~~-----~~~~~K-~~~e~---~  131 (317)
T CHL00194         68 IIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAE---QY----PYI-----PLMKLK-SDIEQ---K  131 (317)
T ss_pred             EEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecccccc---cc----CCC-----hHHHHH-HHHHH---H
Confidence            99988754332  2567788899999999999999999999875421   11    001     112221 22444   4


Q ss_pred             HhcCCCeEEEEeCC-CCCCCCCCCcc------ceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCC
Q 044905          163 VIETDVSYTFIKTS-LTEDFSPESSY------NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPS  235 (427)
Q Consensus       163 l~~~gl~~tilRPG-~~~~~~~~~~~------~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~  235 (427)
                      +.+++++||++||+ ++.++......      .+...+   ...+.++||++|+|++++.++.++ ...|++||+++++ 
T Consensus       132 l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~l~~~-~~~~~~~ni~g~~-  206 (317)
T CHL00194        132 LKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITN---ESTPISYIDTQDAAKFCLKSLSLP-ETKNKTFPLVGPK-  206 (317)
T ss_pred             HHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecC---CCCccCccCHHHHHHHHHHHhcCc-cccCcEEEecCCC-
Confidence            45689999999996 55443211111      111111   123347899999999999999765 3478999999998 


Q ss_pred             CChhhHHHHHHHHHhccch
Q 044905          236 APARRVDELFSAIAEDGRR  254 (427)
Q Consensus       236 ~~~~s~~ell~~i~~~~~~  254 (427)
                        ..++.|+++.+.+..++
T Consensus       207 --~~s~~el~~~~~~~~g~  223 (317)
T CHL00194        207 --SWNSSEIISLCEQLSGQ  223 (317)
T ss_pred             --ccCHHHHHHHHHHHhCC
Confidence              56777777777766554

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.94  E-value=5e-26  Score=217.40  Aligned_cols=241  Identities=14%  Similarity=0.116  Sum_probs=176.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      |+||||||+||||+|.+.+|++.||+|++++.-... ...+....             ..++.+|+.|.+.|.+.|+  .
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-------------~~f~~gDi~D~~~L~~vf~~~~   67 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-------------FKFYEGDLLDRALLTAVFEENK   67 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-------------CceEEeccccHHHHHHHHHhcC
Confidence            689999999999999999999999999999865442 22222111             2489999999999999997  5


Q ss_pred             cCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhhhcccc
Q 044905           82 AGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLFSRNQP  153 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~~k~~~  153 (427)
                      +|+|||+||...-++       +++-|+.++++||++|+++||++|||-||.++|+....-+ .+..+....|.|+++| 
T Consensus        68 idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sK-  146 (329)
T COG1087          68 IDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSK-  146 (329)
T ss_pred             CCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHH-
Confidence            899999999765433       7889999999999999999999999999999998876533 3444444567888887 


Q ss_pred             ccHHHHHHHHh-cCCCeEEEEe--------C-CCCCCCCCC--------------CccceEEecccc-cCCC---CCccc
Q 044905          154 LTVPEFLQKVI-ETDVSYTFIK--------T-SLTEDFSPE--------------SSYNVVVSAEAS-VDAN---DYKVA  205 (427)
Q Consensus       154 l~~E~~l~~l~-~~gl~~tilR--------P-G~~~~~~~~--------------~~~~i~~~~~~~-~~~~---~~~i~  205 (427)
                      +..|++++.+. ..+|++++||        | |.++....+              ....+.+.|.+- ..++   -++||
T Consensus       147 lm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIH  226 (329)
T COG1087         147 LMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIH  226 (329)
T ss_pred             HHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeee
Confidence            88999998887 5789999999        2 223322221              111233333221 1111   17999


Q ss_pred             HHHHHHHHHHHhcCcccc-cCcEEEEecCCCCChhhHHHHHHHHHhccchhhhHHHHH
Q 044905          206 KSQIASLVADVFSNTAVA-ENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALA  262 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~-~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~~~~~  262 (427)
                      +.|+|++.+.+++..... ...+||++++.   -.++.|+++...++.++..-.+..+
T Consensus       227 V~DLA~aH~~Al~~L~~~g~~~~~NLG~G~---G~SV~evi~a~~~vtg~~ip~~~~~  281 (329)
T COG1087         227 VDDLADAHVLALKYLKEGGSNNIFNLGSGN---GFSVLEVIEAAKKVTGRDIPVEIAP  281 (329)
T ss_pred             hhHHHHHHHHHHHHHHhCCceeEEEccCCC---ceeHHHHHHHHHHHhCCcCceeeCC
Confidence            999999999887654321 23699999998   5667777777777666654444433

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.94  E-value=3e-25  Score=216.63  Aligned_cols=267  Identities=15%  Similarity=0.162  Sum_probs=180.8

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh------
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI------   79 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al------   79 (427)
                      +|+||||||++|++++++|+++|++|++++|++++..   ..             +++.+.+|+.|+++|..++      
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~-------------~~~~~~~d~~d~~~l~~a~~~~~~~   64 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GP-------------NEKHVKFDWLDEDTWDNPFSSDDGM   64 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CC-------------CCccccccCCCHHHHHHHHhcccCc
Confidence            5899999999999999999999999999999987532   11             2247889999999999999      


Q ss_pred             cC-cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHH
Q 044905           80 GN-AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPE  158 (427)
Q Consensus        80 ~g-~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~  158 (427)
                      .+ +|.|||+++...    .  ......+++++|+++|++|||++||++.+.+.        .     ...     ..++
T Consensus        65 ~g~~d~v~~~~~~~~----~--~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~--------~-----~~~-----~~~~  120 (285)
T TIGR03649        65 EPEISAVYLVAPPIP----D--LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG--------P-----AMG-----QVHA  120 (285)
T ss_pred             CCceeEEEEeCCCCC----C--hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC--------c-----hHH-----HHHH
Confidence            67 999999887532    1  12366889999999999999999876532110        0     001     1233


Q ss_pred             HHHHHhc-CCCeEEEEeCC-CCCCCCCCCc-c-----ceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEE
Q 044905          159 FLQKVIE-TDVSYTFIKTS-LTEDFSPESS-Y-----NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKV  230 (427)
Q Consensus       159 ~l~~l~~-~gl~~tilRPG-~~~~~~~~~~-~-----~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI  230 (427)
                      +   +.+ +|++||+|||+ +++++..... .     .....+.  .....++|+++|||++++.++.++ ...++.|++
T Consensus       121 ~---l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~v~~~Dva~~~~~~l~~~-~~~~~~~~l  194 (285)
T TIGR03649       121 H---LDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSAT--GDGKIPFVSADDIARVAYRALTDK-VAPNTDYVV  194 (285)
T ss_pred             H---HHhccCCCEEEEeccHHhhhhcccccccccccCCeEEecC--CCCccCcccHHHHHHHHHHHhcCC-CcCCCeEEe
Confidence            3   334 49999999998 6666532111 1     1112111  223457999999999999999865 346789999


Q ss_pred             ecCCCCChhhHHHHHHHHHhccchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhcHHHHHHHhhHHHHH
Q 044905          231 FTDPSAPARRVDELFSAIAEDGRRA-AYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAKAASLAEEAQ  309 (427)
Q Consensus       231 ~~~~~~~~~s~~ell~~i~~~~~~~-~~~~~~~~~~~~eea~~~~~~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  309 (427)
                      ++++   ..++.|++..+++..+++ .|.....     ++........+.+.|.+..+..-..-.  .......+-..++
T Consensus       195 ~g~~---~~s~~eia~~l~~~~g~~v~~~~~~~-----~~~~~~l~~~g~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~  264 (285)
T TIGR03649       195 LGPE---LLTYDDVAEILSRVLGRKITHVKLTE-----EELAQRLQSFGMPEDLARMLASLDTAV--KNGAEVRLNDVVK  264 (285)
T ss_pred             eCCc---cCCHHHHHHHHHHHhCCceEEEeCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHH--hCCccccccchHH
Confidence            9987   677888888888765554 4433333     333333444556666666554422211  1221212334455


Q ss_pred             HhhhhcCCCHHHHHHhhcc
Q 044905          310 EKADVAGAPMDTLLSKAKG  328 (427)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~  328 (427)
                      .--|-+.+||+++++.-+.
T Consensus       265 ~~~G~~p~~~~~~~~~~~~  283 (285)
T TIGR03649       265 AVTGSKPRGFRDFAESNKA  283 (285)
T ss_pred             HHhCcCCccHHHHHHHhhh
Confidence            6678899999999987654

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.93  E-value=7.3e-25  Score=220.51  Aligned_cols=241  Identities=13%  Similarity=0.077  Sum_probs=164.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+++|||||||||||++|+++|+++|++|++++|...... .+......   .......++.++.+|+.|.+.+..+++
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTS---VSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhc---cccccCCceEEEEccCCCHHHHHHHhh
Confidence            55789999999999999999999999999999998654221 11110000   000012456789999999999999999


Q ss_pred             CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhhhccc
Q 044905           81 NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLFSRNQ  152 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~~k~~  152 (427)
                      ++|+|||+|+....     ++  ..++|+.++.+++++|++.|+++|||+||+++|+...... .+..+....+.|+.++
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK  169 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTK  169 (348)
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHH
Confidence            99999999985431     11  5678999999999999999999999999999876433221 1211222234566555


Q ss_pred             cccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----------c------cceEEecccccCCCCCcccHHHHHHHHH
Q 044905          153 PLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----------S------YNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       153 ~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----------~------~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                       +..|.++..+. ..+++++++||+ .++....+.          .      ..+.+.+.+..  ..+++|++|+|++++
T Consensus       170 -~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~--~rd~i~v~D~a~a~~  246 (348)
T PRK15181        170 -YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGST--SRDFCYIENVIQANL  246 (348)
T ss_pred             -HHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCc--eEeeEEHHHHHHHHH
Confidence             66787776655 568999999996 333211100          0      01222222221  126999999999998


Q ss_pred             HHhcCcc-cccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          215 DVFSNTA-VAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       215 ~al~~~~-~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      .++.... ...+++|||+++.   ..++.|++..+.+.
T Consensus       247 ~~~~~~~~~~~~~~yni~~g~---~~s~~e~~~~i~~~  281 (348)
T PRK15181        247 LSATTNDLASKNKVYNVAVGD---RTSLNELYYLIRDG  281 (348)
T ss_pred             HHHhcccccCCCCEEEecCCC---cEeHHHHHHHHHHH
Confidence            7775321 1357899999988   55666777766543

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.93  E-value=2.3e-24  Score=210.69  Aligned_cols=233  Identities=16%  Similarity=0.159  Sum_probs=157.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH---HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE---LARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~---l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .+++|+|||||||||++|++.||.+||.|++.+|+++..+.   |.....        ..+|+.++.+|+.|++++.+++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~--------a~~~l~l~~aDL~d~~sf~~ai   76 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG--------AKERLKLFKADLLDEGSFDKAI   76 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc--------CcccceEEeccccccchHHHHH
Confidence            45799999999999999999999999999999999986322   322211        1356889999999999999999


Q ss_pred             cCcCEEEEccCCCCCC------CCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCC--C--CCccc----
Q 044905           80 GNAGKVVVTIGPTEDG------PTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLD--G--ISSFF----  144 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~------~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~--~--~~~~~----  144 (427)
                      .|||+|||+|.+....      ...+..+.|++|++++|++.. |+||||.||++.......++.+  .  ...|.    
T Consensus        77 ~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~  156 (327)
T KOG1502|consen   77 DGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDF  156 (327)
T ss_pred             hCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHH
Confidence            9999999999987652      256788889999999999998 9999999988753322111111  0  11111    


Q ss_pred             ----hhhhhccccccHHHHHHHH-hcCCCeEEEEeCC-CCCCCCCCCccc---e---EEecc-cc-cCCCCCcccHHHHH
Q 044905          145 ----NNLFSRNQPLTVPEFLQKV-IETDVSYTFIKTS-LTEDFSPESSYN---V---VVSAE-AS-VDANDYKVAKSQIA  210 (427)
Q Consensus       145 ----~~~~~k~~~l~~E~~l~~l-~~~gl~~tilRPG-~~~~~~~~~~~~---i---~~~~~-~~-~~~~~~~i~v~DVA  210 (427)
                          ..+|..++.+ +|...-.+ .+.|++.+.+-|+ .+++...+....   +   .+.|. .. ......+||++|||
T Consensus       157 ~~~~~~~Y~~sK~l-AEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA  235 (327)
T KOG1502|consen  157 CRCKKLWYALSKTL-AEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVA  235 (327)
T ss_pred             HHhhHHHHHHHHHH-HHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHH
Confidence                1234333322 45444333 3678999999997 444443321111   0   01121 11 11112479999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      .+.+.+++.+.  .++.|.+.+..    ..+.|++..+.+
T Consensus       236 ~AHv~a~E~~~--a~GRyic~~~~----~~~~ei~~~l~~  269 (327)
T KOG1502|consen  236 LAHVLALEKPS--AKGRYICVGEV----VSIKEIADILRE  269 (327)
T ss_pred             HHHHHHHcCcc--cCceEEEecCc----ccHHHHHHHHHH
Confidence            99999999764  34666666663    336666666644

>PLN02427 UDP-apiose/xylose synthase

Probab=99.92  E-value=9.3e-24  Score=215.22  Aligned_cols=235  Identities=13%  Similarity=0.051  Sum_probs=157.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+|+|||||||||||++|++.|+++ |++|++++|+.++...+...+..      ....+++++.+|++|.+.+.+++.+
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~------~~~~~~~~~~~Dl~d~~~l~~~~~~   86 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV------PWSGRIQFHRINIKHDSRLEGLIKM   86 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc------cCCCCeEEEEcCCCChHHHHHHhhc
Confidence            4568999999999999999999998 59999999987654443221110      0023578999999999999999999


Q ss_pred             cCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC---CCCCC----------
Q 044905           82 AGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV---LDGIS----------  141 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~---~~~~~----------  141 (427)
                      +|+|||+|+....     ++  ....|+.++.+++++|++.+ ++|||+||+++|+.....+   ..+..          
T Consensus        87 ~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e  165 (386)
T PLN02427         87 ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKE  165 (386)
T ss_pred             CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccc
Confidence            9999999985322     11  34578889999999999887 8999999999876432111   00000          


Q ss_pred             ---c-------cchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC-------C--C--------------c
Q 044905          142 ---S-------FFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP-------E--S--------------S  186 (427)
Q Consensus       142 ---~-------~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~-------~--~--------------~  186 (427)
                         +       ...+.|+.++ +..|.++..+. ..+++++++||+ .++....       +  .              .
T Consensus       166 ~~~~~~~~~~~~~~~~Y~~sK-~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  244 (386)
T PLN02427        166 DESPCIFGSIEKQRWSYACAK-QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR  244 (386)
T ss_pred             cccccccCCCCccccchHHHH-HHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcC
Confidence               0       0112455554 56787776654 568999999996 3332210       0  0              0


Q ss_pred             cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecC-CCCChhhHHHHHHHHHh
Q 044905          187 YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTD-PSAPARRVDELFSAIAE  250 (427)
Q Consensus       187 ~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~-~~~~~~s~~ell~~i~~  250 (427)
                      ..+.+.+.+.  ...++||++|+|++++.+++++....+++||++++ ..   .++.|++..+.+
T Consensus       245 ~~~~~~g~g~--~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~---~s~~el~~~i~~  304 (386)
T PLN02427        245 EPLKLVDGGQ--SQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNE---VTVRQLAEMMTE  304 (386)
T ss_pred             CCeEEECCCC--ceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCC---ccHHHHHHHHHH
Confidence            0111111111  12269999999999999987643235789999986 43   455555555544

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.92  E-value=3.9e-24  Score=209.19  Aligned_cols=230  Identities=13%  Similarity=0.066  Sum_probs=156.8

Q ss_pred             EEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHH--HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            8 FVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQ--ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         8 lItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~--~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ||||||||+|++|+++|+++|  ++|+++++.+....  .+...            ....++.+|++|.+++.++++++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~------------~~~~~~~~Di~d~~~l~~a~~g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS------------GVKEYIQGDITDPESLEEALEGVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc------------cceeEEEeccccHHHHHHHhcCCc
Confidence            699999999999999999999  89999998775321  22221            122389999999999999999999


Q ss_pred             EEEEccCCCCCCC------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC--C-----CCCCCCccchhhhhc
Q 044905           84 KVVVTIGPTEDGP------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY--N-----VLDGISSFFNNLFSR  150 (427)
Q Consensus        84 ~Vi~~ag~~~~~~------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~--~-----~~~~~~~~~~~~~~k  150 (427)
                      +|||+|++.....      ..++|+.|+.|||++|++++|++|||+||.+++.....  +     +..+.+....+.|+.
T Consensus        69 ~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~  148 (280)
T PF01073_consen   69 VVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAE  148 (280)
T ss_pred             eEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHH
Confidence            9999998754321      67899999999999999999999999999987554111  1     111222223356666


Q ss_pred             cccccHHHHHHHHhc------CCCeEEEEeCC-CCCCCCC---CCccceEEec-----ccccCCCCCcccHHHHHHHHHH
Q 044905          151 NQPLTVPEFLQKVIE------TDVSYTFIKTS-LTEDFSP---ESSYNVVVSA-----EASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       151 ~~~l~~E~~l~~l~~------~gl~~tilRPG-~~~~~~~---~~~~~i~~~~-----~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      +| ..+|++......      ..+.+++|||. .++....   +........+     .+......++++++|+|.+++.
T Consensus       149 SK-~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvl  227 (280)
T PF01073_consen  149 SK-ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVL  227 (280)
T ss_pred             HH-HHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHH
Confidence            65 446765544333      23899999995 3332211   1111000011     1111122369999999999876


Q ss_pred             Hhc---Cc---ccccCcEEEEecCCCCChhh-HHHHHHHHHhccc
Q 044905          216 VFS---NT---AVAENKVVKVFTDPSAPARR-VDELFSAIAEDGR  253 (427)
Q Consensus       216 al~---~~---~~~~g~~~nI~~~~~~~~~s-~~ell~~i~~~~~  253 (427)
                      +.+   ++   +...|+.|.|++++   +.. +.+++..+.+..|
T Consensus       228 A~~~L~~~~~~~~~~G~~y~itd~~---p~~~~~~f~~~~~~~~G  269 (280)
T PF01073_consen  228 AAQALLEPGKPERVAGQAYFITDGE---PVPSFWDFMRPLWEALG  269 (280)
T ss_pred             HHHHhccccccccCCCcEEEEECCC---ccCcHHHHHHHHHHHCC
Confidence            543   22   45689999999998   444 7777777665433

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.92  E-value=1.6e-23  Score=210.28  Aligned_cols=231  Identities=12%  Similarity=0.120  Sum_probs=158.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCC-CHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFD-SAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~-D~~sl~~al~g   81 (427)
                      ||+|||||||||+|++|++.|++. ||+|++++|+......+..            ..+++++.+|+. |.+.+.+++++
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~------------~~~~~~~~~Dl~~~~~~~~~~~~~   68 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN------------HPRMHFFEGDITINKEWIEYHVKK   68 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc------------CCCeEEEeCCCCCCHHHHHHHHcC
Confidence            578999999999999999999987 6999999987643322211            124578999997 77888889999


Q ss_pred             cCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCC-----c--cchh
Q 044905           82 AGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGIS-----S--FFNN  146 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~-----~--~~~~  146 (427)
                      +|+|||+++....     ++  ..++|+.++.+++++|++.+ ++|||+||+++|+.....+. +..+     +  ...+
T Consensus        69 ~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~  147 (347)
T PRK11908         69 CDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRW  147 (347)
T ss_pred             CCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccc
Confidence            9999999875321     22  45678889999999999988 79999999988764322111 1111     1  1123


Q ss_pred             hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC------C--------------ccceEEecccccCCCCCcc
Q 044905          147 LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE------S--------------SYNVVVSAEASVDANDYKV  204 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~------~--------------~~~i~~~~~~~~~~~~~~i  204 (427)
                      .|+.++ +..|+++..+. ..+++++++||+ +++....+      .              ...+.+.+.+..  ..++|
T Consensus       148 ~Y~~sK-~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~--~r~~i  224 (347)
T PRK11908        148 IYACSK-QLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ--KRAFT  224 (347)
T ss_pred             hHHHHH-HHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCce--eeccc
Confidence            566555 56777776655 579999999986 33322110      0              001112121221  22699


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecC-CCCChhhHHHHHHHHHhccc
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTD-PSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~-~~~~~~s~~ell~~i~~~~~  253 (427)
                      |++|++++++.++.++.. ..+++|||+++ .   ..++.|++..|.+..+
T Consensus       225 ~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~---~~s~~e~~~~i~~~~~  272 (347)
T PRK11908        225 DIDDGIDALMKIIENKDGVASGKIYNIGNPKN---NHSVRELANKMLELAA  272 (347)
T ss_pred             cHHHHHHHHHHHHhCccccCCCCeEEeCCCCC---CcCHHHHHHHHHHHhc
Confidence            999999999998876432 35789999985 3   3566777777755433

>PLN02214 cinnamoyl-CoA reductase

Probab=99.91  E-value=7.4e-23  Score=205.59  Aligned_cols=235  Identities=21%  Similarity=0.227  Sum_probs=160.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH--HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE--LARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~--l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      .+++|+|||||||||++|++.|+++||+|++++|+.+....  +.... .       ...+++++.+|++|.+++.++++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~-------~~~~~~~~~~Dl~d~~~~~~~~~   80 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELE-G-------GKERLILCKADLQDYEALKAAID   80 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhh-C-------CCCcEEEEecCcCChHHHHHHHh
Confidence            45789999999999999999999999999999998754221  11100 0       01346789999999999999999


Q ss_pred             CcCEEEEccCCCCCCC--CccccHHHHHHHHHHHHHcCCCeEEEEecc-cccccccCC---CCCCC-------Cccchhh
Q 044905           81 NAGKVVVTIGPTEDGP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDG-NTTAASTYN---VLDGI-------SSFFNNL  147 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs-~v~~~~~~~---~~~~~-------~~~~~~~  147 (427)
                      ++|+|||++++...++  .++.|+.++.+++++|+++++++|||+||+ ++|+.....   ..++.       +....+.
T Consensus        81 ~~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~  160 (342)
T PLN02214         81 GCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNW  160 (342)
T ss_pred             cCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccH
Confidence            9999999999764433  467889999999999999999999999996 465432211   11111       0011234


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----ccceE--Eecccc--cCCCCCcccHHHHHHHHHHHh
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----SYNVV--VSAEAS--VDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----~~~i~--~~~~~~--~~~~~~~i~v~DVA~~v~~al  217 (427)
                      |+.+| +.+|.++..+. +.|++++++||+ .++....+.    ...+.  ..+...  .....+|||++|+|++++.++
T Consensus       161 Y~~sK-~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al  239 (342)
T PLN02214        161 YCYGK-MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVY  239 (342)
T ss_pred             HHHHH-HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHH
Confidence            55554 56788776654 569999999996 443322110    00000  011100  111237999999999999999


Q ss_pred             cCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          218 SNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       218 ~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      +++ . .++.||+++.    ..++.+++..+.+..
T Consensus       240 ~~~-~-~~g~yn~~~~----~~~~~el~~~i~~~~  268 (342)
T PLN02214        240 EAP-S-ASGRYLLAES----ARHRGEVVEILAKLF  268 (342)
T ss_pred             hCc-c-cCCcEEEecC----CCCHHHHHHHHHHHC
Confidence            764 2 3568999875    246677777776543

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.90  E-value=2.1e-23  Score=211.87  Aligned_cols=227  Identities=11%  Similarity=0.056  Sum_probs=155.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..|+|+|||||||||++|++.|+++||+|++++|.....  +...           .....++.+|++|.+.+..++.++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~   86 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--MSED-----------MFCHEFHLVDLRVMENCLKVTKGV   86 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--cccc-----------cccceEEECCCCCHHHHHHHHhCC
Confidence            357899999999999999999999999999999865321  1000           001247889999999999999999


Q ss_pred             CEEEEccCCCCC------CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-----CCCCC--CCccchhh
Q 044905           83 GKVVVTIGPTED------GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-----NVLDG--ISSFFNNL  147 (427)
Q Consensus        83 d~Vi~~ag~~~~------~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-----~~~~~--~~~~~~~~  147 (427)
                      |+|||+++....      .+  ....|+.++.+++++|++.++++|||+||+++|+....     +..+.  .+....+.
T Consensus        87 D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~  166 (370)
T PLN02695         87 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA  166 (370)
T ss_pred             CEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCH
Confidence            999999975421      11  34567889999999999999999999999988764321     11111  11122345


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC---C-------Cc-------cceEEecccccCCCCCcccHHH
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP---E-------SS-------YNVVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~---~-------~~-------~~i~~~~~~~~~~~~~~i~v~D  208 (427)
                      |+..+ ...|.++..+. ..|++++++||+ +++....   .       ..       ..+.+.+.+.  ...+++|++|
T Consensus       167 Yg~sK-~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~--~~r~~i~v~D  243 (370)
T PLN02695        167 YGLEK-LATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGK--QTRSFTFIDE  243 (370)
T ss_pred             HHHHH-HHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCC--eEEeEEeHHH
Confidence            55554 56787776654 569999999996 4433210   0       00       1111111111  1236899999


Q ss_pred             HHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          209 IASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       209 VA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +++++..++.+.   .+++||++++.   ..++.+++..+.+.
T Consensus       244 ~a~ai~~~~~~~---~~~~~nv~~~~---~~s~~el~~~i~~~  280 (370)
T PLN02695        244 CVEGVLRLTKSD---FREPVNIGSDE---MVSMNEMAEIALSF  280 (370)
T ss_pred             HHHHHHHHHhcc---CCCceEecCCC---ceeHHHHHHHHHHH
Confidence            999999887643   36889999987   55666666666553

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=1.2e-22  Score=201.13  Aligned_cols=237  Identities=15%  Similarity=0.163  Sum_probs=157.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|||||||||||++|++.|+++|++|++++|+.............     ....+++.++.+|+.|++.+..+++++|
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   78 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLAL-----DGAKERLHLFKANLLEEGSFDSVVDGCE   78 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhc-----cCCCCceEEEeccccCcchHHHHHcCCC
Confidence            47899999999999999999999999999999987643222111000     0012466799999999999999999999


Q ss_pred             EEEEccCCCCC---C---CCccccHHHHHHHHHHHHHc-CCCeEEEEecccc--cccccC-C--CCCC---CCcc----c
Q 044905           84 KVVVTIGPTED---G---PTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNT--TAASTY-N--VLDG---ISSF----F  144 (427)
Q Consensus        84 ~Vi~~ag~~~~---~---~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v--~~~~~~-~--~~~~---~~~~----~  144 (427)
                      +|||++++...   .   ..+++|+.++.+++++|.+. ++++|||+||++.  |++... +  +.++   ..+.    .
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~  158 (322)
T PLN02662         79 GVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES  158 (322)
T ss_pred             EEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence            99999986432   1   24567899999999999987 8999999999752  432211 0  1111   1111    0


Q ss_pred             hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCcc---ce---EEecc-cccCCCCCcccHHHHHHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSY---NV---VVSAE-ASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~---~i---~~~~~-~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .+.|+..+ +..|.++..+. +.+++++++||+ +++....+...   ..   ...+. .......++||++|+|++++.
T Consensus       159 ~~~Y~~sK-~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  237 (322)
T PLN02662        159 KLWYVLSK-TLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQ  237 (322)
T ss_pred             cchHHHHH-HHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHH
Confidence            12455444 45777666544 579999999997 44433211100   00   00111 111123479999999999999


Q ss_pred             HhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          216 VFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       216 al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      ++.++. . ++.|++++ .   ..++.|++..+.+..
T Consensus       238 ~~~~~~-~-~~~~~~~g-~---~~s~~e~~~~i~~~~  268 (322)
T PLN02662        238 AFEIPS-A-SGRYCLVE-R---VVHYSEVVKILHELY  268 (322)
T ss_pred             HhcCcC-c-CCcEEEeC-C---CCCHHHHHHHHHHHC
Confidence            998642 2 35788875 3   467778888776643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.90  E-value=2.7e-22  Score=199.16  Aligned_cols=237  Identities=14%  Similarity=0.176  Sum_probs=156.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|||||||||||++|+++|+++||+|++++|+.+....+......     .....+++++.+|++|.+++.++++++|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~~d   79 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLAL-----DGAKERLKLFKADLLEESSFEQAIEGCD   79 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhc-----cCCCCceEEEecCCCCcchHHHHHhCCC
Confidence            36899999999999999999999999999999988754333221110     0002356789999999999999999999


Q ss_pred             EEEEccCCCCC---CC---CccccHHHHHHHHHHHHHc-CCCeEEEEecccccc-cc-cC---CCC-CCC--Cc----cc
Q 044905           84 KVVVTIGPTED---GP---TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTA-AS-TY---NVL-DGI--SS----FF  144 (427)
Q Consensus        84 ~Vi~~ag~~~~---~~---~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~-~~-~~---~~~-~~~--~~----~~  144 (427)
                      +|||+|++...   ++   ..++|+.++.+++++|++. ++++|||+||++.+. +. ..   ... +..  .+    ..
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~  159 (322)
T PLN02986         80 AVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRET  159 (322)
T ss_pred             EEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhcc
Confidence            99999987532   22   3567899999999999986 799999999986432 11 10   001 110  00    01


Q ss_pred             hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc---cce---EEecccc-cCCCCCcccHHHHHHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS---YNV---VVSAEAS-VDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~---~~i---~~~~~~~-~~~~~~~i~v~DVA~~v~~  215 (427)
                      .+.|+.++ ..+|.++..+. +.+++++++||+ .+++...+..   ..+   ...+... .....++||++|+|++++.
T Consensus       160 ~~~Y~~sK-~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~  238 (322)
T PLN02986        160 KNWYPLSK-ILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIK  238 (322)
T ss_pred             ccchHHHH-HHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHH
Confidence            23454444 45777666554 579999999997 3433221110   000   0111110 1111269999999999999


Q ss_pred             HhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          216 VFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       216 al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      ++.++.  .++.||++++    ..++.+++..+.+..
T Consensus       239 al~~~~--~~~~yni~~~----~~s~~e~~~~i~~~~  269 (322)
T PLN02986        239 ALETPS--ANGRYIIDGP----IMSVNDIIDILRELF  269 (322)
T ss_pred             HhcCcc--cCCcEEEecC----CCCHHHHHHHHHHHC
Confidence            998653  2458999544    466777777775543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.90  E-value=6.2e-23  Score=186.99  Aligned_cols=182  Identities=21%  Similarity=0.337  Sum_probs=132.4

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVV   86 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~Vi   86 (427)
                      |+|+||||++|++|+++|+++|++|++++|++++.+.  .             .+++++.+|+.|++++.+++.++|+||
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~-------------~~~~~~~~d~~d~~~~~~al~~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--S-------------PGVEIIQGDLFDPDSVKAALKGADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--C-------------TTEEEEESCTTCHHHHHHHHTTSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--c-------------cccccceeeehhhhhhhhhhhhcchhh
Confidence            7999999999999999999999999999999987654  2             345699999999999999999999999


Q ss_pred             EccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHhcC
Q 044905           87 VTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIET  166 (427)
Q Consensus        87 ~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~~~  166 (427)
                      +++|+...      +...+.+++++|+.+|++|+|++|+.+++..............+. .|...+ ...|   +.+.++
T Consensus        66 ~~~~~~~~------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~e---~~~~~~  134 (183)
T PF13460_consen   66 HAAGPPPK------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFP-EYARDK-REAE---EALRES  134 (183)
T ss_dssp             ECCHSTTT------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGH-HHHHHH-HHHH---HHHHHS
T ss_pred             hhhhhhcc------cccccccccccccccccccceeeeccccCCCCCcccccccccchh-hhHHHH-HHHH---HHHHhc
Confidence            99987643      266889999999999999999999998765433211111111111 122211 1233   444568


Q ss_pred             CCeEEEEeCC-CCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          167 DVSYTFIKTS-LTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       167 gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      +++||++||+ ++++. . ..+.+...   ......++|+++|+|++++.++++
T Consensus       135 ~~~~~ivrp~~~~~~~-~-~~~~~~~~---~~~~~~~~i~~~DvA~~~~~~l~~  183 (183)
T PF13460_consen  135 GLNWTIVRPGWIYGNP-S-RSYRLIKE---GGPQGVNFISREDVAKAIVEALEN  183 (183)
T ss_dssp             TSEEEEEEESEEEBTT-S-SSEEEESS---TSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECcEeEeCC-C-cceeEEec---cCCCCcCcCCHHHHHHHHHHHhCC
Confidence            9999999998 55543 2 12222221   111223799999999999998863

...

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.90  E-value=6.3e-23  Score=194.64  Aligned_cols=214  Identities=23%  Similarity=0.335  Sum_probs=147.7

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+||||.+|++|++.|++.+++|++++|++++  .+.+...+++             ++.+|+.|.++|.++|+|+|+
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~-------------vv~~d~~~~~~l~~al~g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAE-------------VVEADYDDPESLVAALKGVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTE-------------EEES-TT-HHHHHHHHTTCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccce-------------EeecccCCHHHHHHHHcCCce
Confidence            7999999999999999999999999999999853  3555555554             899999999999999999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI  164 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~  164 (427)
                      ||++.+...     ........++++||+++||+|||+.| .+.    .........+ ...++. .    ...+.+.++
T Consensus        68 v~~~~~~~~-----~~~~~~~~~li~Aa~~agVk~~v~ss-~~~----~~~~~~~~~p-~~~~~~-~----k~~ie~~l~  131 (233)
T PF05368_consen   68 VFSVTPPSH-----PSELEQQKNLIDAAKAAGVKHFVPSS-FGA----DYDESSGSEP-EIPHFD-Q----KAEIEEYLR  131 (233)
T ss_dssp             EEEESSCSC-----CCHHHHHHHHHHHHHHHT-SEEEESE-ESS----GTTTTTTSTT-HHHHHH-H----HHHHHHHHH
T ss_pred             EEeecCcch-----hhhhhhhhhHHHhhhccccceEEEEE-ecc----cccccccccc-cchhhh-h----hhhhhhhhh
Confidence            999998653     33344778999999999999998433 221    1111111111 111221 1    113334555


Q ss_pred             cCCCeEEEEeCC-CCCCCCCCCcc---------ceEEecccccCCCCCc-ccHHHHHHHHHHHhcCcccc-cCcEEEEec
Q 044905          165 ETDVSYTFIKTS-LTEDFSPESSY---------NVVVSAEASVDANDYK-VAKSQIASLVADVFSNTAVA-ENKVVKVFT  232 (427)
Q Consensus       165 ~~gl~~tilRPG-~~~~~~~~~~~---------~i~~~~~~~~~~~~~~-i~v~DVA~~v~~al~~~~~~-~g~~~nI~~  232 (427)
                      +.+++||+|||| ||+++......         .+.+.++...  ...+ ++.+|||++++.++.+|+.+ .|+.+.+++
T Consensus       132 ~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  132 ESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQ--KAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG  209 (233)
T ss_dssp             HCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTS--EEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG
T ss_pred             hccccceeccccchhhhhhhhhcccccccccceEEEEccCCCc--cccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC
Confidence            689999999998 66554331111         1233333221  1235 59999999999999988776 688888877


Q ss_pred             CCCCChhhHHHHHHHHHhccchh
Q 044905          233 DPSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       233 ~~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      +    ..++.|+++.+++..|++
T Consensus       210 ~----~~t~~eia~~~s~~~G~~  228 (233)
T PF05368_consen  210 E----TLTYNEIAAILSKVLGKK  228 (233)
T ss_dssp             G----EEEHHHHHHHHHHHHTSE
T ss_pred             C----CCCHHHHHHHHHHHHCCc
Confidence            5    678899999998875543

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.90  E-value=7e-23  Score=212.01  Aligned_cols=229  Identities=10%  Similarity=0.052  Sum_probs=152.6

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |...|+|+|||||||||++|++.|+++|++|++++|.... ...+....         ...+++++.+|+.+.     .+
T Consensus       117 ~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~---------~~~~~~~~~~Di~~~-----~~  182 (436)
T PLN02166        117 GRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF---------GNPRFELIRHDVVEP-----IL  182 (436)
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc---------cCCceEEEECccccc-----cc
Confidence            3456799999999999999999999999999999986432 11111100         013556888898764     35


Q ss_pred             cCcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCC-----Cccchh
Q 044905           80 GNAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGI-----SSFFNN  146 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~-----~~~~~~  146 (427)
                      .++|+|||+|+....     ++  .++.|+.++.+++++|+++|+ +|||+||+++|+.....+. +..     +....+
T Consensus       183 ~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s  261 (436)
T PLN02166        183 LEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERS  261 (436)
T ss_pred             cCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCC
Confidence            689999999985432     11  456899999999999999986 8999999998865432211 110     111224


Q ss_pred             hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC---CC-c----------cceEEecccccCCCCCcccHHHHH
Q 044905          147 LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP---ES-S----------YNVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~---~~-~----------~~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      .|+..+ +.+|.++..+. ..+++++++||+ +++....   .. .          ..+.+.+.+..  ..+++|++|++
T Consensus       262 ~Yg~SK-~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~--~rdfi~V~Dva  338 (436)
T PLN02166        262 CYDEGK-RTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQ--TRSFQYVSDLV  338 (436)
T ss_pred             chHHHH-HHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCe--EEeeEEHHHHH
Confidence            566555 56888877665 568999999985 4433211   00 0          01112222111  12699999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++++.++...   .+++|||+++.   ..++.+++..+.+..+
T Consensus       339 ~ai~~~~~~~---~~giyNIgs~~---~~Si~ela~~I~~~~g  375 (436)
T PLN02166        339 DGLVALMEGE---HVGPFNLGNPG---EFTMLELAEVVKETID  375 (436)
T ss_pred             HHHHHHHhcC---CCceEEeCCCC---cEeHHHHHHHHHHHhC
Confidence            9999988643   35699999988   4556666666655433

>PLN02650 dihydroflavonol-4-reductase

Probab=99.89  E-value=5.5e-22  Score=199.50  Aligned_cols=237  Identities=15%  Similarity=0.200  Sum_probs=157.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +.++|||||||||||++|++.|+++|++|++++|+......+......     .....++.++.+|++|.+.+.++++++
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~v~~Dl~d~~~~~~~~~~~   78 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL-----PGATTRLTLWKADLAVEGSFDDAIRGC   78 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc-----cCCCCceEEEEecCCChhhHHHHHhCC
Confidence            567999999999999999999999999999999987654443221100     000124678999999999999999999


Q ss_pred             CEEEEccCCCCC---C---CCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccC--CC-CCCC---------Ccc
Q 044905           83 GKVVVTIGPTED---G---PTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTY--NV-LDGI---------SSF  143 (427)
Q Consensus        83 d~Vi~~ag~~~~---~---~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~--~~-~~~~---------~~~  143 (427)
                      |+|||+++....   +   ..+++|+.++.+++++|.+.+ +++|||+||.++++....  +. .+..         ...
T Consensus        79 d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~  158 (351)
T PLN02650         79 TGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKM  158 (351)
T ss_pred             CEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhcccc
Confidence            999999986432   1   245788999999999999987 899999999865443211  10 1110         001


Q ss_pred             chhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccc-eE-----Eecccc---cCCCCCcccHHHHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYN-VV-----VSAEAS---VDANDYKVAKSQIASL  212 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~-i~-----~~~~~~---~~~~~~~i~v~DVA~~  212 (427)
                      ....|+.++ +..|.++..+. +.|++++++||+ .++......... +.     ..+...   .....+|+|++|+|++
T Consensus       159 ~~~~Y~~sK-~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a  237 (351)
T PLN02650        159 TGWMYFVSK-TLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNA  237 (351)
T ss_pred             ccchHHHHH-HHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHH
Confidence            112465555 56788777665 569999999997 333321110000 00     001100   0111379999999999


Q ss_pred             HHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          213 VADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++.++.++ . .+..| ++++.   ..++.+++..+.+.
T Consensus       238 ~~~~l~~~-~-~~~~~-i~~~~---~~s~~el~~~i~~~  270 (351)
T PLN02650        238 HIFLFEHP-A-AEGRY-ICSSH---DATIHDLAKMLREK  270 (351)
T ss_pred             HHHHhcCc-C-cCceE-EecCC---CcCHHHHHHHHHHh
Confidence            99999754 2 23467 55555   35666666666543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.89  E-value=4.6e-22  Score=200.04  Aligned_cols=235  Identities=11%  Similarity=0.070  Sum_probs=156.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      |++|||||||||||++|++.|+++|++++++.++......+......      ....++.++.+|++|.+++.+++++  
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~   74 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPV------AQSERFAFEKVDICDRAELARVFTEHQ   74 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhc------ccCCceEEEECCCcChHHHHHHHhhcC
Confidence            57999999999999999999999998866554433211111110000      0012456889999999999999984  


Q ss_pred             cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHH---------cCCCeEEEEecccccccccC--C-CCCCCCc
Q 044905           82 AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQL---------AGVGHVAIIYDGNTTAASTY--N-VLDGISS  142 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~---------~gVk~~V~vSSs~v~~~~~~--~-~~~~~~~  142 (427)
                      +|+|||++|.....       ...++|+.++.+++++|..         .++++||++||+++|+....  . ..+..+.
T Consensus        75 ~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~  154 (355)
T PRK10217         75 PDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPY  154 (355)
T ss_pred             CCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCC
Confidence            89999999865321       1567899999999999986         35789999999888753211  1 1111122


Q ss_pred             cchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-C-----------ccceEEecccccCCCCCcccHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-S-----------SYNVVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~-----------~~~i~~~~~~~~~~~~~~i~v~D  208 (427)
                      ...+.|+.++ +.+|.++..+. +.+++++++||+ +++....+ .           ...+.+.+.+.  ...+++|++|
T Consensus       155 ~p~s~Y~~sK-~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~--~~~~~i~v~D  231 (355)
T PRK10217        155 APSSPYSASK-ASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQ--QIRDWLYVED  231 (355)
T ss_pred             CCCChhHHHH-HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCC--eeeCcCcHHH
Confidence            2234566555 56787777654 679999999996 33332111 0           00111212221  1236999999


Q ss_pred             HHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          209 IASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       209 VA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      +++++..++...  ..+++||+++++   ..++.+++..+.+..
T Consensus       232 ~a~a~~~~~~~~--~~~~~yni~~~~---~~s~~~~~~~i~~~~  270 (355)
T PRK10217        232 HARALYCVATTG--KVGETYNIGGHN---ERKNLDVVETICELL  270 (355)
T ss_pred             HHHHHHHHHhcC--CCCCeEEeCCCC---cccHHHHHHHHHHHh
Confidence            999999988753  357899999998   556666666665543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.89  E-value=5.1e-22  Score=203.01  Aligned_cols=227  Identities=19%  Similarity=0.227  Sum_probs=153.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .+++|+||||||+||++|++.|+++|++|++++|+.+......... .  +  .....+++++.+|++|++++.++++  
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~-~--~--~~~~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKE-D--T--KKELPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhh-H--H--hhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence            4568999999999999999999999999999999875432100000 0  0  0012356799999999999999998  


Q ss_pred             --CcCEEEEccCCCCC--CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccH
Q 044905           81 --NAGKVVVTIGPTED--GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTV  156 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~--~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~  156 (427)
                        ++|+||||++....  ....++|+.++.+++++|++.|+++||++||.+++.        +..     .|.+.+ ...
T Consensus       134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------p~~-----~~~~sK-~~~  199 (390)
T PLN02657        134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------PLL-----EFQRAK-LKF  199 (390)
T ss_pred             CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------cch-----HHHHHH-HHH
Confidence              59999999886432  224577888999999999999999999999887531        111     111221 224


Q ss_pred             HHHHHHHhcCCCeEEEEeCC-CCCCCCCC-----CccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEE
Q 044905          157 PEFLQKVIETDVSYTFIKTS-LTEDFSPE-----SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKV  230 (427)
Q Consensus       157 E~~l~~l~~~gl~~tilRPG-~~~~~~~~-----~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI  230 (427)
                      |+.+.. ...+++|+||||+ ++.++...     ....+.+.+.+.. ...++||++|+|++++.++.++ ...+++|+|
T Consensus       200 E~~l~~-~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~-~~~~~I~v~DlA~~i~~~~~~~-~~~~~~~~I  276 (390)
T PLN02657        200 EAELQA-LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKL-CACKPISEADLASFIADCVLDE-SKINKVLPI  276 (390)
T ss_pred             HHHHHh-ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcc-cccCceeHHHHHHHHHHHHhCc-cccCCEEEc
Confidence            544432 2488999999996 55432110     0011222222211 1124799999999999998754 346899999


Q ss_pred             ecC-CCCChhhHHHHHHHHHhccch
Q 044905          231 FTD-PSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       231 ~~~-~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +++ .   ..++.|+++.+.+..++
T Consensus       277 ggp~~---~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        277 GGPGK---ALTPLEQGEMLFRILGK  298 (390)
T ss_pred             CCCCc---ccCHHHHHHHHHHHhCC
Confidence            985 4   35666676666665443

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.89  E-value=7.5e-22  Score=204.85  Aligned_cols=242  Identities=13%  Similarity=0.100  Sum_probs=155.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-------HHHHH---HHhhhhhhhhhhhccceEEEecCCC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-------QELAR---LAASYKILSKEELKRLNAVESNFDS   71 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-------~~l~~---~~~~~~~~~~~~~~rl~vv~gDl~D   71 (427)
                      -++|+|||||||||||++|++.|+++|++|++++|.....       ..+..   .......+......+++++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            3567999999999999999999999999999987432100       00000   0000000000011356799999999


Q ss_pred             HHHHHHHhc--CcCEEEEccCCCCCC-----C-----CccccHHHHHHHHHHHHHcCCC-eEEEEecccccccccCCCCC
Q 044905           72 AESIAKAIG--NAGKVVVTIGPTEDG-----P-----TSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        72 ~~sl~~al~--g~d~Vi~~ag~~~~~-----~-----~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~v~~~~~~~~~~  138 (427)
                      .+.+.++++  ++|+|||+++.....     +     ..++|+.++.+++++|+..|++ +||++||+++|+....+..+
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~~E  204 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDIEE  204 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCCcc
Confidence            999999998  489999999653321     1     2467999999999999999986 99999999988643211111


Q ss_pred             C--------------CCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC-----------------
Q 044905          139 G--------------ISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES-----------------  185 (427)
Q Consensus       139 ~--------------~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~-----------------  185 (427)
                      .              .+....+.|+.+| ++.|.++..+. ..|++++++||+ .++......                 
T Consensus       205 ~~i~~~~~~~e~~~~~~~~P~s~Yg~SK-~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~  283 (442)
T PLN02572        205 GYITITHNGRTDTLPYPKQASSFYHLSK-VHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFG  283 (442)
T ss_pred             cccccccccccccccCCCCCCCcchhHH-HHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchh
Confidence            0              1112234677666 56788887765 569999999986 333321100                 


Q ss_pred             ------------ccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccC--cEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          186 ------------SYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN--KVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       186 ------------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g--~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                                  ...+.+.+.+...  .+|+|++|++++++.++.+.. ..+  .+||+++ .   ..++.|++..+.+.
T Consensus       284 ~~i~~~~~~~~~g~~i~v~g~G~~~--Rdfi~V~Dva~a~~~al~~~~-~~g~~~i~Nigs-~---~~si~el~~~i~~~  356 (442)
T PLN02572        284 TALNRFCVQAAVGHPLTVYGKGGQT--RGFLDIRDTVRCIEIAIANPA-KPGEFRVFNQFT-E---QFSVNELAKLVTKA  356 (442)
T ss_pred             hHHHHHHHHHhcCCCceecCCCCEE--ECeEEHHHHHHHHHHHHhChh-hcCceeEEEeCC-C---ceeHHHHHHHHHHH
Confidence                        0011121222211  269999999999999887532 223  5799976 4   35566666666554

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.89  E-value=1.1e-21  Score=205.42  Aligned_cols=239  Identities=27%  Similarity=0.395  Sum_probs=164.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhh--hhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKIL--SKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~--~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |+.++|+||||||+||++|+++|+++|++|++++|+..++..+........+.  ......++.++.+|+.|.+++.+++
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            46678999999999999999999999999999999987765543321110000  0000135679999999999999999


Q ss_pred             cCcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccc
Q 044905           80 GNAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l  154 (427)
                      .++|+|||++|.....     ..+.+|+.++.+++++|..+|++|||++||.+.+... ... .... .... +...   
T Consensus       158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g-~p~-~~~~-sk~~-~~~~---  230 (576)
T PLN03209        158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVG-FPA-AILN-LFWG-VLCW---  230 (576)
T ss_pred             cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccC-ccc-cchh-hHHH-HHHH---
Confidence            9999999999875321     1356788899999999999999999999988642110 000 0000 0011 1111   


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCCCCCCCCCC--CccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEec
Q 044905          155 TVPEFLQKVIETDVSYTFIKTSLTEDFSPE--SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFT  232 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG~~~~~~~~--~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~  232 (427)
                       ...+.+.+..+|++|++||||++......  ....+..........  ..+...|||++++.++.++....+++|.+.+
T Consensus       231 -KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~g--r~isreDVA~vVvfLasd~~as~~kvvevi~  307 (576)
T PLN03209        231 -KRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFG--GQVSNLQVAELMACMAKNRRLSYCKVVEVIA  307 (576)
T ss_pred             -HHHHHHHHHHcCCCEEEEECCeecCCccccccccceeeccccccCC--CccCHHHHHHHHHHHHcCchhccceEEEEEe
Confidence             12333445578999999999965421110  112232222222222  3689999999999999876556799999999


Q ss_pred             CCCCChhhHHHHHHHHHh
Q 044905          233 DPSAPARRVDELFSAIAE  250 (427)
Q Consensus       233 ~~~~~~~s~~ell~~i~~  250 (427)
                      +...+..++.+++..|..
T Consensus       308 ~~~~p~~~~~~~~~~ip~  325 (576)
T PLN03209        308 ETTAPLTPMEELLAKIPS  325 (576)
T ss_pred             CCCCCCCCHHHHHHhccc
Confidence            988888999999988753

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.89  E-value=2.2e-21  Score=186.33  Aligned_cols=225  Identities=25%  Similarity=0.423  Sum_probs=156.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHh-c
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAI-G   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al-~   80 (427)
                      ++|+|+||||||++|++|++.|+++||+|++++|++++...+...           ..++.++.+|++| .+.+.+.+ .
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-----------~~~~~~~~~Dl~d~~~~l~~~~~~   84 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-----------DPSLQIVRADVTEGSDKLVEAIGD   84 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-----------CCceEEEEeeCCCCHHHHHHHhhc
Confidence            568999999999999999999999999999999998654332111           1245689999998 57788888 6


Q ss_pred             CcCEEEEccCCCCC-CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhc---cccc
Q 044905           81 NAGKVVVTIGPTED-GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSR---NQPL  154 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k---~~~l  154 (427)
                      ++|+|||++|.... ++  ..++|..++.++++++.+.++++|||+||.++|+.....+..+. ....+.+..   .+ +
T Consensus        85 ~~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~-~~~~~~~~~~~~~k-~  162 (251)
T PLN00141         85 DSDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPA-YIFLNLFGLTLVAK-L  162 (251)
T ss_pred             CCCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcc-hhHHHHHHHHHHHH-H
Confidence            89999999886432 21  34678889999999999999999999999987643221111110 001111111   11 2


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCCCC-CCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          155 TVPEFLQKVIETDVSYTFIKTSLT-EDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG~~-~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      ..|+   .+.++|++|++||||++ ++..   ...+.........  .++|+++|||++++.++.++ .+.+.++.+.+.
T Consensus       163 ~~e~---~l~~~gi~~~iirpg~~~~~~~---~~~~~~~~~~~~~--~~~i~~~dvA~~~~~~~~~~-~~~~~~~~~~~~  233 (251)
T PLN00141        163 QAEK---YIRKSGINYTIVRPGGLTNDPP---TGNIVMEPEDTLY--EGSISRDQVAEVAVEALLCP-ESSYKVVEIVAR  233 (251)
T ss_pred             HHHH---HHHhcCCcEEEEECCCccCCCC---CceEEECCCCccc--cCcccHHHHHHHHHHHhcCh-hhcCcEEEEecC
Confidence            2343   34468999999999854 3321   1222222111112  24899999999999998865 356788999987


Q ss_pred             CCCChhhHHHHHHHHH
Q 044905          234 PSAPARRVDELFSAIA  249 (427)
Q Consensus       234 ~~~~~~s~~ell~~i~  249 (427)
                      .+....++.++...+.
T Consensus       234 ~~~~~~~~~~~~~~~~  249 (251)
T PLN00141        234 ADAPKRSYKDLFASIK  249 (251)
T ss_pred             CCCCchhHHHHHHHhh
Confidence            7777788898888763

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.89  E-value=2.4e-22  Score=208.34  Aligned_cols=226  Identities=9%  Similarity=0.065  Sum_probs=150.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ...|+|||||||||||++|++.|+++|++|++++|..... ..+...         ....+++++.+|+.+.     ++.
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~---------~~~~~~~~i~~D~~~~-----~l~  182 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH---------FSNPNFELIRHDVVEP-----ILL  182 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh---------ccCCceEEEECCccCh-----hhc
Confidence            4567999999999999999999999999999998764321 111110         1123567888998775     356


Q ss_pred             CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CC----CCc-cchhh
Q 044905           81 NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DG----ISS-FFNNL  147 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~----~~~-~~~~~  147 (427)
                      ++|+|||+++....     ++  ..++|+.++.+++++|+++|+ +|||+||+.+|+....... +.    ..+ ...+.
T Consensus       183 ~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~  261 (442)
T PLN02206        183 EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSC  261 (442)
T ss_pred             CCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccch
Confidence            89999999985432     11  456899999999999999997 8999999998764322111 11    111 11245


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC---CC-c----------cceEEecccccCCCCCcccHHHHHH
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP---ES-S----------YNVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~---~~-~----------~~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      |+..+ +.+|.++..+. ..+++++++||+ +++....   .. .          ..+.+.+.+..  ..+++|++|+|+
T Consensus       262 Y~~SK-~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~--~rdfi~V~Dva~  338 (442)
T PLN02206        262 YDEGK-RTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQ--TRSFQFVSDLVE  338 (442)
T ss_pred             HHHHH-HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCE--EEeEEeHHHHHH
Confidence            66555 56787776654 568999999985 4432210   00 0          01122122111  125899999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +++.+++..   .++.|||+++.   ..++.|++..+.+.
T Consensus       339 ai~~a~e~~---~~g~yNIgs~~---~~sl~Elae~i~~~  372 (442)
T PLN02206        339 GLMRLMEGE---HVGPFNLGNPG---EFTMLELAKVVQET  372 (442)
T ss_pred             HHHHHHhcC---CCceEEEcCCC---ceeHHHHHHHHHHH
Confidence            999888643   35699999988   44555665555443

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.89  E-value=7.3e-22  Score=214.60  Aligned_cols=233  Identities=10%  Similarity=0.104  Sum_probs=158.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH-HHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAES-IAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s-l~~al~   80 (427)
                      .+|+|||||||||||++|++.|+++ ||+|++++|.......+..            ..+++++.+|++|... +.++++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~------------~~~~~~~~gDl~d~~~~l~~~l~  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG------------HPRFHFVEGDISIHSEWIEYHIK  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC------------CCceEEEeccccCcHHHHHHHhc
Confidence            4679999999999999999999986 7999999998653222211            2356789999998655 577889


Q ss_pred             CcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCC-----cc--ch
Q 044905           81 NAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGIS-----SF--FN  145 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~-----~~--~~  145 (427)
                      ++|+|||+|+.....       ...++|+.++.+++++|++++ ++|||+||+++|+....... +..+     +.  ..
T Consensus       382 ~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~  460 (660)
T PRK08125        382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQR  460 (660)
T ss_pred             CCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCc
Confidence            999999999854321       145688899999999999998 89999999988764322111 1111     11  11


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC--------------C------ccceEEecccccCCCCCc
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE--------------S------SYNVVVSAEASVDANDYK  203 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~--------------~------~~~i~~~~~~~~~~~~~~  203 (427)
                      +.|+.+| +..|.++..+. ..|++++++||+ +++.....              .      ...+.+.+.+..  ..++
T Consensus       461 s~Yg~sK-~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~--~rd~  537 (660)
T PRK08125        461 WIYSVSK-QLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQ--KRCF  537 (660)
T ss_pred             cchHHHH-HHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCce--eece
Confidence            3466555 66888887765 569999999986 34332110              0      001112222221  2369


Q ss_pred             ccHHHHHHHHHHHhcCcc-cccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          204 VAKSQIASLVADVFSNTA-VAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ||++|+|++++.+++++. ...+++|||+++..  ..++.|++..+.+..+
T Consensus       538 i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~--~~s~~el~~~i~~~~g  586 (660)
T PRK08125        538 TDIRDGIEALFRIIENKDNRCDGQIINIGNPDN--EASIRELAEMLLASFE  586 (660)
T ss_pred             eeHHHHHHHHHHHHhccccccCCeEEEcCCCCC--ceeHHHHHHHHHHHhc
Confidence            999999999999987542 23578999998731  2466666666655433

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.89  E-value=1.1e-21  Score=196.72  Aligned_cols=237  Identities=10%  Similarity=0.069  Sum_probs=157.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ++|||||||||||++|++.|+++|++|++++|+++.  ...+......   .......++.++.+|++|.+.+.+++++ 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYED---PHNVNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhc---cccccccceeEEEeccCCHHHHHHHHHhC
Confidence            589999999999999999999999999999998642  1122111000   0000013467999999999999999985 


Q ss_pred             -cCEEEEccCCCCCC-----C--CccccHHHHHHHHHHHHHcCCC---eEEEEecccccccccCCCC-CCCCccchhhhh
Q 044905           82 -AGKVVVTIGPTEDG-----P--TSEVSTSDAFQVIQAAQLAGVG---HVAIIYDGNTTAASTYNVL-DGISSFFNNLFS  149 (427)
Q Consensus        82 -~d~Vi~~ag~~~~~-----~--~~~vn~~~~~~ll~Aa~~~gVk---~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~  149 (427)
                       +|+|||+|+.....     +  ..++|+.++.+++++|+.+|++   +|||+||+++|+....... +..+....+.|+
T Consensus        78 ~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  157 (343)
T TIGR01472        78 KPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYA  157 (343)
T ss_pred             CCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhH
Confidence             59999999864321     1  3356778999999999998864   8999999998865432211 111212234566


Q ss_pred             ccccccHHHHHHHHh-cCCCeEEEEeCC-CCCC-----CCCCCc---------c--ceEEecccccCCCCCcccHHHHHH
Q 044905          150 RNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTED-----FSPESS---------Y--NVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       150 k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~-----~~~~~~---------~--~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      .++ +..|.++..+. +.++++++.|+. .++.     +.....         .  .....+.+..  ..+|+|++|+|+
T Consensus       158 ~sK-~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~--~rd~i~V~D~a~  234 (343)
T TIGR01472       158 AAK-LYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDA--KRDWGHAKDYVE  234 (343)
T ss_pred             HHH-HHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCcc--ccCceeHHHHHH
Confidence            665 66788887765 468888888852 2221     111000         0  0111121222  237999999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +++.++.++   .+++|||+++.   ..++.|++..+.+..+
T Consensus       235 a~~~~~~~~---~~~~yni~~g~---~~s~~e~~~~i~~~~g  270 (343)
T TIGR01472       235 AMWLMLQQD---KPDDYVIATGE---THSVREFVEVSFEYIG  270 (343)
T ss_pred             HHHHHHhcC---CCccEEecCCC---ceeHHHHHHHHHHHcC
Confidence            999888753   24689999998   4566666666655444

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.89  E-value=1.7e-21  Score=194.82  Aligned_cols=237  Identities=14%  Similarity=0.157  Sum_probs=155.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +++++|||||||||||++|++.|+++|++|++++|+......+.... .   +  ...++++++.+|++|.+.+.+++.+
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~---~--~~~~~~~~~~~Dl~d~~~~~~~~~~   80 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLR-A---L--QELGDLKIFGADLTDEESFEAPIAG   80 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH-h---c--CCCCceEEEEcCCCChHHHHHHHhc
Confidence            45789999999999999999999999999999999875432221100 0   0  0013467899999999999999999


Q ss_pred             cCEEEEccCCCCC---CC---CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccC-----CCCCCC---------
Q 044905           82 AGKVVVTIGPTED---GP---TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTY-----NVLDGI---------  140 (427)
Q Consensus        82 ~d~Vi~~ag~~~~---~~---~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~-----~~~~~~---------  140 (427)
                      +|+|||+|+....   .+   .+++|+.++.+++++|.+. ++++|||+||+++|+....     ...+..         
T Consensus        81 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~  160 (338)
T PLN00198         81 CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS  160 (338)
T ss_pred             CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh
Confidence            9999999986432   12   2467899999999999886 5899999999887653210     000100         


Q ss_pred             CccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC---Ccc----------ceEEec-cccc--CCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE---SSY----------NVVVSA-EASV--DANDY  202 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~---~~~----------~i~~~~-~~~~--~~~~~  202 (427)
                      .....+.|+.+| +..|.++..+. ..+++++++||+ .+++....   ...          .+...+ .+..  ....+
T Consensus       161 ~~~p~~~Y~~sK-~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  239 (338)
T PLN00198        161 EKPPTWGYPASK-TLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSIS  239 (338)
T ss_pred             cCCccchhHHHH-HHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcc
Confidence            011123455554 56788777665 469999999996 44432111   000          011111 0111  11137


Q ss_pred             cccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          203 KVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++|++|++++++.++... . .++.| ++++.   ..++.++++.+.+.
T Consensus       240 ~i~V~D~a~a~~~~~~~~-~-~~~~~-~~~~~---~~s~~el~~~i~~~  282 (338)
T PLN00198        240 ITHVEDVCRAHIFLAEKE-S-ASGRY-ICCAA---NTSVPELAKFLIKR  282 (338)
T ss_pred             eeEHHHHHHHHHHHhhCc-C-cCCcE-EEecC---CCCHHHHHHHHHHH
Confidence            999999999999988754 2 23456 45554   34566666666543

>PLN02686 cinnamoyl-CoA reductase

Probab=99.88  E-value=1.2e-21  Score=198.65  Aligned_cols=245  Identities=15%  Similarity=0.114  Sum_probs=159.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.+++|||||||||||++|++.|+++||+|++++|+.+....+..... +.- ......++.++.+|++|.+++.+++.+
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~-~~~-~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEM-FGE-MGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-hcc-ccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            457799999999999999999999999999999998765443322100 000 000012456899999999999999999


Q ss_pred             cCEEEEccCCCCC-------CCCccccHHHHHHHHHHHHHc-CCCeEEEEeccc--ccccc--cC--CCCCC-------C
Q 044905           82 AGKVVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGN--TTAAS--TY--NVLDG-------I  140 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~--v~~~~--~~--~~~~~-------~  140 (427)
                      +|+|||+++....       ....++|+.++.+++++|++. ++++|||+||.+  +|+..  ..  ...+.       .
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~  208 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF  208 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence            9999999875422       224567899999999999986 799999999863  44321  10  00111       0


Q ss_pred             CccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC----CccceEEecccc--cCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE----SSYNVVVSAEAS--VDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~----~~~~i~~~~~~~--~~~~~~~i~v~DVA~~  212 (427)
                      +......|+.+| +..|.++..+. ..|+++++|||+ +++.....    ...... .+...  .....+++|++|+|++
T Consensus       209 ~~~p~~~Y~~sK-~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~-~g~~~~~g~g~~~~v~V~Dva~A  286 (367)
T PLN02686        209 CRDNKLWYALGK-LKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYL-KGAQEMLADGLLATADVERLAEA  286 (367)
T ss_pred             cccccchHHHHH-HHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHh-cCCCccCCCCCcCeEEHHHHHHH
Confidence            011123455555 56787776654 569999999997 33332110    000000 11111  1111259999999999


Q ss_pred             HHHHhcCc-ccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          213 VADVFSNT-AVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       213 v~~al~~~-~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++.+++.+ ....+++| |+++.   ..++.+++..+.+..+.
T Consensus       287 ~~~al~~~~~~~~~~~y-i~~g~---~~s~~e~~~~i~~~~g~  325 (367)
T PLN02686        287 HVCVYEAMGNKTAFGRY-ICFDH---VVSREDEAEELARQIGL  325 (367)
T ss_pred             HHHHHhccCCCCCCCcE-EEeCC---CccHHHHHHHHHHHcCC
Confidence            99988742 12245677 77776   56777777777766553

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.88  E-value=1.1e-21  Score=194.17  Aligned_cols=230  Identities=17%  Similarity=0.146  Sum_probs=159.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+||||||++|++|++.|+++|++|++++|++.....+..             ..++++.+|++|.+++.++++++|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------~~~~~~~~D~~~~~~l~~~~~~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-------------LDVEIVEGDLRDPASLRKAVAGCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-------------CCceEEEeeCCCHHHHHHHHhCCCE
Confidence            589999999999999999999999999999998765332211             1345899999999999999999999


Q ss_pred             EEEccCCCCC---C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC--CCCCCCCcc---chhhhhccccc
Q 044905           85 VVVTIGPTED---G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY--NVLDGISSF---FNNLFSRNQPL  154 (427)
Q Consensus        85 Vi~~ag~~~~---~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~--~~~~~~~~~---~~~~~~k~~~l  154 (427)
                      |||+++....   .  ...++|+.++.+++++|...+++++|++||+++|+....  +..+..+..   ....|+..+ +
T Consensus        68 vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK-~  146 (328)
T TIGR03466        68 LFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSK-F  146 (328)
T ss_pred             EEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHH-H
Confidence            9999975421   1  145678889999999999999999999999887653211  111111111   112455444 5


Q ss_pred             cHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC--ccceEE---ec--ccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          155 TVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES--SYNVVV---SA--EASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       155 ~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~--~~~i~~---~~--~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      ..|.++..+. ..+++++++||+ +++......  ...+..   .+  +.....+.+++|++|+|++++.++.+.  ..+
T Consensus       147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~--~~~  224 (328)
T TIGR03466       147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG--RIG  224 (328)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC--CCC
Confidence            5777776665 468999999997 333221100  000000   00  001122346999999999999988753  357


Q ss_pred             cEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          226 KVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       226 ~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ..|++++ +   ..++.|++..+.+..++
T Consensus       225 ~~~~~~~-~---~~s~~e~~~~i~~~~g~  249 (328)
T TIGR03466       225 ERYILGG-E---NLTLKQILDKLAEITGR  249 (328)
T ss_pred             ceEEecC-C---CcCHHHHHHHHHHHhCC
Confidence            7888754 4   57788888888776554

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02583 cinnamoyl-CoA reductase

Probab=99.88  E-value=3.3e-21  Score=189.83  Aligned_cols=233  Identities=16%  Similarity=0.146  Sum_probs=149.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH--HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ--ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~--~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .++|+|||||||||++|++.|+++||+|++++|+.+...  .+.....       ....++.++.+|++|.+++.+++.+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~-------~~~~~~~~~~~Dl~d~~~~~~~l~~   78 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLS-------CEEERLKVFDVDPLDYHSILDALKG   78 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcc-------cCCCceEEEEecCCCHHHHHHHHcC
Confidence            468999999999999999999999999999999754321  1111000       0013567899999999999999999


Q ss_pred             cCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHc-CCCeEEEEecccccc-c-ccCC---CCCCC-C---ccc--
Q 044905           82 AGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTA-A-STYN---VLDGI-S---SFF--  144 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~-~-~~~~---~~~~~-~---~~~--  144 (427)
                      +|.|+|++++....     ..+++|+.++.+++++|.+. ++++||++||.+.+. + ....   ..++. +   .+.  
T Consensus        79 ~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~  158 (297)
T PLN02583         79 CSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRK  158 (297)
T ss_pred             CCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhh
Confidence            99999987654321     24678999999999999887 689999999876432 2 1100   11111 0   000  


Q ss_pred             -hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccceEEec-ccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          145 -NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYNVVVSA-EASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       145 -~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~i~~~~-~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                       ...|+.++ +.+|++...+. ..|+++++|||+ .++...... ..+.... ........++||++|+|++++.+++++
T Consensus       159 ~~~~Y~~sK-~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~  236 (297)
T PLN02583        159 FKLWHALAK-TLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQH-NPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDV  236 (297)
T ss_pred             cccHHHHHH-HHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCc-hhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCc
Confidence             01344444 45777665544 569999999997 444322211 1111110 000111236999999999999999865


Q ss_pred             ccccCcEEEEecCCCCChhhHHHHHHH
Q 044905          221 AVAENKVVKVFTDPSAPARRVDELFSA  247 (427)
Q Consensus       221 ~~~~g~~~nI~~~~~~~~~s~~ell~~  247 (427)
                       ... +.|.++++.......+.+++..
T Consensus       237 -~~~-~r~~~~~~~~~~~~~~~~~~~~  261 (297)
T PLN02583        237 -SSY-GRYLCFNHIVNTEEDAVKLAQM  261 (297)
T ss_pred             -ccC-CcEEEecCCCccHHHHHHHHHH
Confidence             333 4688877752223344445544

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.88  E-value=2.6e-21  Score=192.22  Aligned_cols=237  Identities=14%  Similarity=0.148  Sum_probs=156.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++||||||+||||++|++.|+++|++|++++|+.............     .....++.++.+|++|.+++.++++++|
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~d~~~~~~~~~~~d   79 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLAL-----DGAKERLKLFKADLLDEGSFELAIDGCE   79 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhc-----cCCCCceEEEeCCCCCchHHHHHHcCCC
Confidence            47899999999999999999999999999999987643322111000     0001356789999999999999999999


Q ss_pred             EEEEccCCCCCC-------CCccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccC-----CC-CCC--CCcc----
Q 044905           84 KVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTY-----NV-LDG--ISSF----  143 (427)
Q Consensus        84 ~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~-----~~-~~~--~~~~----  143 (427)
                      +|||++|.....       ..+++|+.++.+++++|... ++++||++||.+.+.+...     .+ .+.  ..+.    
T Consensus        80 ~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~  159 (325)
T PLN02989         80 TVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEE  159 (325)
T ss_pred             EEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcc
Confidence            999999864321       13467899999999999885 5789999999876544321     01 111  1110    


Q ss_pred             chhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCcc---ceE---Eeccccc-CCCCCcccHHHHHHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSY---NVV---VSAEASV-DANDYKVAKSQIASLVA  214 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~---~i~---~~~~~~~-~~~~~~i~v~DVA~~v~  214 (427)
                      ..+.|+.++ +..|.++..+. +.|++++++||+ .++....+...   .+.   ..+.... .....|+|++|+|++++
T Consensus       160 ~~~~Y~~sK-~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~  238 (325)
T PLN02989        160 RKQWYVLSK-TLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDVALAHV  238 (325)
T ss_pred             cccchHHHH-HHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHH
Confidence            013455544 56787776655 569999999997 33332211000   000   0111110 11126899999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      .++.++.  .++.||++++    ..++.++++.+.+..
T Consensus       239 ~~l~~~~--~~~~~ni~~~----~~s~~ei~~~i~~~~  270 (325)
T PLN02989        239 KALETPS--ANGRYIIDGP----VVTIKDIENVLREFF  270 (325)
T ss_pred             HHhcCcc--cCceEEEecC----CCCHHHHHHHHHHHC
Confidence            9987643  2568999544    356677777665543

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.88  E-value=6.8e-22  Score=186.26  Aligned_cols=209  Identities=13%  Similarity=0.156  Sum_probs=151.8

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc--CE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA--GK   84 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~--d~   84 (427)
                      |||||||||+|++|++.|+++|+.|+.+.|+..........            .++.++.+|+.|.+.+.+++.+.  |+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------------~~~~~~~~dl~~~~~~~~~~~~~~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------------LNVEFVIGDLTDKEQLEKLLEKANIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------------TTEEEEESETTSHHHHHHHHHHHTESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------------ceEEEEEeeccccccccccccccCceE
Confidence            79999999999999999999999999999988754322111            14468999999999999999876  99


Q ss_pred             EEEccCCCCC-------CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhhhccccccH
Q 044905           85 VVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLFSRNQPLTV  156 (427)
Q Consensus        85 Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~~k~~~l~~  156 (427)
                      |||+++....       ....+.|+.++.+++++|+..+++++||+||+.+|+...... .+..+....+.|+..+ ...
T Consensus        69 vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K-~~~  147 (236)
T PF01370_consen   69 VIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASK-RAA  147 (236)
T ss_dssp             EEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHH-HHH
T ss_pred             EEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence            9999997531       125677889999999999999999999999998877663322 2222222223455444 457


Q ss_pred             HHHHHHHh-cCCCeEEEEeCC-CCCCC---CC-CC-----------ccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          157 PEFLQKVI-ETDVSYTFIKTS-LTEDF---SP-ES-----------SYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       157 E~~l~~l~-~~gl~~tilRPG-~~~~~---~~-~~-----------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      |+++..+. ..+++++++||+ +++..   .. ..           ..++.+.+.+..  ..+++|++|+|++++.++++
T Consensus       148 e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  148 EELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQ--VRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSC--EEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCC--ccceEEHHHHHHHHHHHHhC
Confidence            77777665 469999999986 33332   01 00           011333232222  23689999999999999987


Q ss_pred             cccccCcEEEEe
Q 044905          220 TAVAENKVVKVF  231 (427)
Q Consensus       220 ~~~~~g~~~nI~  231 (427)
                      +. ..+++|||+
T Consensus       226 ~~-~~~~~yNig  236 (236)
T PF01370_consen  226 PK-AAGGIYNIG  236 (236)
T ss_dssp             SC-TTTEEEEES
T ss_pred             CC-CCCCEEEeC
Confidence            64 579999985

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.88  E-value=5.6e-21  Score=192.44  Aligned_cols=235  Identities=17%  Similarity=0.179  Sum_probs=155.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..|+|||||||||||++|++.|+++|++|++++|+......+.....        ...++.++.+|++|.+.+.+++.++
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK--------EGDRLRLFRADLQEEGSFDEAVKGC   80 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc--------cCCeEEEEECCCCCHHHHHHHHcCC
Confidence            46799999999999999999999999999999998765443322110        0235678999999999999999999


Q ss_pred             CEEEEccCCCCCC-------C--C-----ccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccC-----CCCCCC--
Q 044905           83 GKVVVTIGPTEDG-------P--T-----SEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTY-----NVLDGI--  140 (427)
Q Consensus        83 d~Vi~~ag~~~~~-------~--~-----~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~-----~~~~~~--  140 (427)
                      |+|||+++.....       +  .     ++.++.++.+++++|++.+ +++||++||+++|+....     .+.++.  
T Consensus        81 d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~  160 (353)
T PLN02896         81 DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQ  160 (353)
T ss_pred             CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccC
Confidence            9999999864321       1  1     1223478999999998875 899999999888764321     111110  


Q ss_pred             Cc--------cchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccc----eE--Eecccc--------
Q 044905          141 SS--------FFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYN----VV--VSAEAS--------  196 (427)
Q Consensus       141 ~~--------~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~----i~--~~~~~~--------  196 (427)
                      .+        .....|+.++ +..|.++..+. ..+++++++||+ .++.........    +.  ..+...        
T Consensus       161 ~p~~~~~~~~~~~~~Y~~sK-~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  239 (353)
T PLN02896        161 TPIDHVWNTKASGWVYVLSK-LLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAV  239 (353)
T ss_pred             CcHHHhhccCCCCccHHHHH-HHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccc
Confidence            00        0112466555 66888877765 579999999985 443322110000    00  011100        


Q ss_pred             --cCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          197 --VDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       197 --~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                        .....+|||++|+|++++.++..+.  .+..|++ ++.   ..++.+++..+.+..
T Consensus       240 ~~~~~~~dfi~v~Dva~a~~~~l~~~~--~~~~~~~-~~~---~~s~~el~~~i~~~~  291 (353)
T PLN02896        240 NSRMGSIALVHIEDICDAHIFLMEQTK--AEGRYIC-CVD---SYDMSELINHLSKEY  291 (353)
T ss_pred             ccccCceeEEeHHHHHHHHHHHHhCCC--cCccEEe-cCC---CCCHHHHHHHHHHhC
Confidence              0011268999999999999887532  2346754 444   466777777776543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.87  E-value=3.9e-21  Score=209.34  Aligned_cols=233  Identities=10%  Similarity=0.089  Sum_probs=159.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      .+|+|||||||||||++|++.|+++  |++|++++|...  ....+...         ....++.++.+|++|.+.+..+
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~---------~~~~~v~~~~~Dl~d~~~~~~~   75 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS---------KSSPNFKFVKGDIASADLVNYL   75 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc---------ccCCCeEEEECCCCChHHHHHH
Confidence            4689999999999999999999998  689999987531  22222110         0123567899999999988876


Q ss_pred             h--cCcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCC----CCCCccc
Q 044905           79 I--GNAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVL----DGISSFF  144 (427)
Q Consensus        79 l--~g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~----~~~~~~~  144 (427)
                      +  .++|+|||+|+.....       ...++|+.++.+++++|+..| +++|||+||..+|+.......    +..+...
T Consensus        76 ~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p  155 (668)
T PLN02260         76 LITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLP  155 (668)
T ss_pred             HhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCC
Confidence            6  5899999999975431       145688899999999999988 899999999998765433211    1111112


Q ss_pred             hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-----------cceEEecccccCCCCCcccHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-----------YNVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-----------~~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      .+.|+.++ +..|.++..+. +.+++++++||+ +++..... ..           ..+.+.+.+.  ...++||++|+|
T Consensus       156 ~~~Y~~sK-~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~--~~r~~ihV~Dva  232 (668)
T PLN02260        156 TNPYSATK-AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGS--NVRSYLYCEDVA  232 (668)
T ss_pred             CCCcHHHH-HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCC--ceEeeEEHHHHH
Confidence            24555554 56788777655 568999999996 44322111 00           0112222111  122689999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      +++..++...  ..+++||++++.   ..++.+++..+.+..
T Consensus       233 ~a~~~~l~~~--~~~~vyni~~~~---~~s~~el~~~i~~~~  269 (668)
T PLN02260        233 EAFEVVLHKG--EVGHVYNIGTKK---ERRVIDVAKDICKLF  269 (668)
T ss_pred             HHHHHHHhcC--CCCCEEEECCCC---eeEHHHHHHHHHHHh
Confidence            9999888643  357899999987   455666666665543

>PLN00016 RNA-binding protein; Provisional

Probab=99.87  E-value=3.4e-21  Score=196.08  Aligned_cols=227  Identities=15%  Similarity=0.120  Sum_probs=147.0

Q ss_pred             CCCEEEEE----cCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVA----GATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlIt----GATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++++||||    |||||||++|++.|+++||+|++++|+......+....  +..+......+++++.+|+.|.+.+. .
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~--~~~~~~l~~~~v~~v~~D~~d~~~~~-~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEP--FSRFSELSSAGVKTVWGDPADVKSKV-A  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCc--hhhhhHhhhcCceEEEecHHHHHhhh-c
Confidence            46789999    99999999999999999999999999876432221100  00000000124678999998744332 2


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHH
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPE  158 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~  158 (427)
                      ..++|+|||+++.         +..++.+++++|++.|+++|||+||.++|+.....+......... ..++   +..|.
T Consensus       128 ~~~~d~Vi~~~~~---------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p-~~sK---~~~E~  194 (378)
T PLN00016        128 GAGFDVVYDNNGK---------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKP-KAGH---LEVEA  194 (378)
T ss_pred             cCCccEEEeCCCC---------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCC-cchH---HHHHH
Confidence            3579999998753         234788999999999999999999999876533221111111110 1122   33565


Q ss_pred             HHHHHhcCCCeEEEEeCC-CCCCCCCCCc-----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCc
Q 044905          159 FLQKVIETDVSYTFIKTS-LTEDFSPESS-----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENK  226 (427)
Q Consensus       159 ~l~~l~~~gl~~tilRPG-~~~~~~~~~~-----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~  226 (427)
                      ++   .+.+++|+++||+ +++.......           ..+.+.+.+.  ...+++|++|+|++++.++.++. ..++
T Consensus       195 ~l---~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~--~~~~~i~v~Dva~ai~~~l~~~~-~~~~  268 (378)
T PLN00016        195 YL---QKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGI--QLTQLGHVKDLASMFALVVGNPK-AAGQ  268 (378)
T ss_pred             HH---HHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCC--eeeceecHHHHHHHHHHHhcCcc-ccCC
Confidence            44   4579999999997 4443211100           0112212111  12368999999999999998653 4579


Q ss_pred             EEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          227 VVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       227 ~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +||++++.   ..++.+++..+.+..+.
T Consensus       269 ~yni~~~~---~~s~~el~~~i~~~~g~  293 (378)
T PLN00016        269 IFNIVSDR---AVTFDGMAKACAKAAGF  293 (378)
T ss_pred             EEEecCCC---ccCHHHHHHHHHHHhCC
Confidence            99999987   56677777777665443

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.87  E-value=5e-21  Score=190.97  Aligned_cols=239  Identities=12%  Similarity=0.114  Sum_probs=154.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      |+|+|||||||||++|++.|+++|++|++++|..............      ....++.++.+|++|.+++.+++.  ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIER------LGGKHPTFVEGDIRNEALLTEILHDHAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHH------hcCCCceEEEccCCCHHHHHHHHhcCCC
Confidence            5899999999999999999999999999998653321111110000      001234578999999999999886  68


Q ss_pred             CEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCc-cchhhhhcccc
Q 044905           83 GKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISS-FFNNLFSRNQP  153 (427)
Q Consensus        83 d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~-~~~~~~~k~~~  153 (427)
                      |+|||+++.....       ....+|+.++.+++++|+.+|+++||++||+++|+.....+. +..+. .....|+..+ 
T Consensus        75 d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK-  153 (338)
T PRK10675         75 DTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK-  153 (338)
T ss_pred             CEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHH-
Confidence            9999999864321       145678889999999999999999999999887654322111 11111 1123455444 


Q ss_pred             ccHHHHHHHHhc--CCCeEEEEeCC-C--------CCCCC---CCCc------------cceEEecc-c---ccCCCCCc
Q 044905          154 LTVPEFLQKVIE--TDVSYTFIKTS-L--------TEDFS---PESS------------YNVVVSAE-A---SVDANDYK  203 (427)
Q Consensus       154 l~~E~~l~~l~~--~gl~~tilRPG-~--------~~~~~---~~~~------------~~i~~~~~-~---~~~~~~~~  203 (427)
                      ...|.++..+.+  .+++++++|++ .        ++...   ....            ..+.+.+. .   ......++
T Consensus       154 ~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  233 (338)
T PRK10675        154 LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDY  233 (338)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEee
Confidence            557888877652  47999999953 1        11100   0000            00111110 0   01111369


Q ss_pred             ccHHHHHHHHHHHhcCc-ccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          204 VAKSQIASLVADVFSNT-AVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~-~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +|++|+|++++.++... ....+++||+++++   ..++.|++..+.+..+
T Consensus       234 v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  281 (338)
T PRK10675        234 IHVMDLADGHVAAMEKLANKPGVHIYNLGAGV---GSSVLDVVNAFSKACG  281 (338)
T ss_pred             EEHHHHHHHHHHHHHhhhccCCCceEEecCCC---ceeHHHHHHHHHHHhC
Confidence            99999999999888642 12245899999988   5566677666665444

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=4.2e-21  Score=188.53  Aligned_cols=226  Identities=15%  Similarity=0.148  Sum_probs=155.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc-C
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA-G   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~-d   83 (427)
                      |+|||||||||||++|++.|+++||+|++++|.......+. .             ++.++.+|++|.+.+...+.++ |
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~-------------~~~~~~~d~~~~~~~~~~~~~~~d   66 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-S-------------GVEFVVLDLTDRDLVDELAKGVPD   66 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-c-------------ccceeeecccchHHHHHHHhcCCC
Confidence            35999999999999999999999999999999877543332 1             2348999999999888899988 9


Q ss_pred             EEEEccCCCCCCC--------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC-CC-CC-CCccchhhhhccc
Q 044905           84 KVVVTIGPTEDGP--------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN-VL-DG-ISSFFNNLFSRNQ  152 (427)
Q Consensus        84 ~Vi~~ag~~~~~~--------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~-~~-~~-~~~~~~~~~~k~~  152 (427)
                      +|||+++......        ...+|+.++.+++++|++.++++|||.||.++++..... +. +. .+....+.|+.++
T Consensus        67 ~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK  146 (314)
T COG0451          67 AVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSK  146 (314)
T ss_pred             EEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHH
Confidence            9999998765311        468999999999999999999999997766655443111 11 11 1222222566665


Q ss_pred             cccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccc-e-------EEeccc--cc----CCCCCcccHHHHHHHHHHH
Q 044905          153 PLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYN-V-------VVSAEA--SV----DANDYKVAKSQIASLVADV  216 (427)
Q Consensus       153 ~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~-i-------~~~~~~--~~----~~~~~~i~v~DVA~~v~~a  216 (427)
                       +.+|.++.... ..|++++++||+ +++......... +       ...+..  ..    ....+++|++|++++++.+
T Consensus       147 -~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         147 -LAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             -HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence             66888777665 468999999985 444322211000 0       000110  00    1112589999999999999


Q ss_pred             hcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          217 FSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ++++.  .+ .||++++.  ...++.+++..+.+
T Consensus       226 ~~~~~--~~-~~ni~~~~--~~~~~~e~~~~~~~  254 (314)
T COG0451         226 LENPD--GG-VFNIGSGT--AEITVRELAEAVAE  254 (314)
T ss_pred             HhCCC--Cc-EEEeCCCC--CcEEHHHHHHHHHH
Confidence            98653  23 99999985  12445555555554

>PLN02240 UDP-glucose 4-epimerase

Probab=99.87  E-value=9.4e-21  Score=190.02  Aligned_cols=241  Identities=12%  Similarity=0.110  Sum_probs=157.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH----HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA----QELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~----~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |.+++|+|||||||+|++|++.|+++|++|++++|.....    ..+.....       ....++.++.+|++|.+.+..
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~l~~   75 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG-------DLGDNLVFHKVDLRDKEALEK   75 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc-------ccCccceEEecCcCCHHHHHH
Confidence            3457999999999999999999999999999998754321    11111100       001356789999999999999


Q ss_pred             Hhc--CcCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhh
Q 044905           78 AIG--NAGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNL  147 (427)
Q Consensus        78 al~--g~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~  147 (427)
                      ++.  ++|+|||+++......       .++.|+.++.+++++|++.++++||++||+++|+.....+. +..+....+.
T Consensus        76 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~  155 (352)
T PLN02240         76 VFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNP  155 (352)
T ss_pred             HHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCH
Confidence            886  6899999998643211       45778889999999999999999999999887754322111 1111112245


Q ss_pred             hhccccccHHHHHHHHh--cCCCeEEEEeCC-CCCCC-----------CCCC----c--------cceEEecc----ccc
Q 044905          148 FSRNQPLTVPEFLQKVI--ETDVSYTFIKTS-LTEDF-----------SPES----S--------YNVVVSAE----ASV  197 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~--~~gl~~tilRPG-~~~~~-----------~~~~----~--------~~i~~~~~----~~~  197 (427)
                      |+.++ ...|.++..+.  ..+++++++|++ .++..           .+..    .        ..+...+.    ...
T Consensus       156 Y~~sK-~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  234 (352)
T PLN02240        156 YGRTK-LFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDG  234 (352)
T ss_pred             HHHHH-HHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCC
Confidence            55554 56888887664  357899999974 21110           0000    0        01111110    001


Q ss_pred             CCCCCcccHHHHHHHHHHHhcCc---ccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          198 DANDYKVAKSQIASLVADVFSNT---AVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       198 ~~~~~~i~v~DVA~~v~~al~~~---~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ....++||++|+|++++.++...   ....+++||+++++   ..++.|++..+.+..+
T Consensus       235 ~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~---~~s~~el~~~i~~~~g  290 (352)
T PLN02240        235 TGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGK---GTSVLEMVAAFEKASG  290 (352)
T ss_pred             CEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCC---cEeHHHHHHHHHHHhC
Confidence            11126899999999988877532   12346899999998   4566666666655433

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=1.6e-20  Score=188.76  Aligned_cols=234  Identities=15%  Similarity=0.078  Sum_probs=155.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|||||||||||++|++.|+++|++|++++|+......... ...         ..++.++.+|++|.+++.++++.
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~Dl~~~~~~~~~~~~   73 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---------AKKIEDHFGDIRDAAKLRKAIAE   73 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---------cCCceEEEccCCCHHHHHHHHhh
Confidence            45799999999999999999999999999999998764322211 110         12456789999999999999985


Q ss_pred             --cCEEEEccCCCCCC-----C--CccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCC--CCCCCCccchhhhh
Q 044905           82 --AGKVVVTIGPTEDG-----P--TSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYN--VLDGISSFFNNLFS  149 (427)
Q Consensus        82 --~d~Vi~~ag~~~~~-----~--~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~--~~~~~~~~~~~~~~  149 (427)
                        +|+|||+++.....     +  .+++|+.++.+++++|+..+ +++||++||+.+|+.....  ..+..+....+.|+
T Consensus        74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~  153 (349)
T TIGR02622        74 FKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYS  153 (349)
T ss_pred             cCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcch
Confidence              59999999853221     1  45788899999999999887 8899999998887543211  11111111123454


Q ss_pred             ccccccHHHHHHHHhc--------CCCeEEEEeCC-CCCCCC--CCC-----------ccceEEecccccCCCCCcccHH
Q 044905          150 RNQPLTVPEFLQKVIE--------TDVSYTFIKTS-LTEDFS--PES-----------SYNVVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       150 k~~~l~~E~~l~~l~~--------~gl~~tilRPG-~~~~~~--~~~-----------~~~i~~~~~~~~~~~~~~i~v~  207 (427)
                      .++ .+.|.++..+..        .+++++++||+ +++...  ...           ...+.+. .+.  ...+|+|++
T Consensus       154 ~sK-~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~g~--~~rd~i~v~  229 (349)
T TIGR02622       154 SSK-ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NPD--ATRPWQHVL  229 (349)
T ss_pred             hHH-HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC-CCC--cccceeeHH
Confidence            443 456777765542        38999999997 443211  000           0011221 111  123699999


Q ss_pred             HHHHHHHHHhcCc---ccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          208 QIASLVADVFSNT---AVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       208 DVA~~v~~al~~~---~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      |++++++.++...   ....+++|||+++... ..++.+++..+.+
T Consensus       230 D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~-~~s~~~~~~~i~~  274 (349)
T TIGR02622       230 EPLSGYLLLAEKLFTGQAEFAGAWNFGPRASD-NARVVELVVDALE  274 (349)
T ss_pred             HHHHHHHHHHHHHhhcCccccceeeeCCCccc-CcCHHHHHHHHHH
Confidence            9999998776532   1123679999975211 4666777776654

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.86  E-value=4.6e-21  Score=185.10  Aligned_cols=276  Identities=14%  Similarity=0.118  Sum_probs=185.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .++||||||.||||+|.+-+|+++||.|++++.-..    .+........        +.+++.++.+|+.|.++|.+.|
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~--------~~~~v~f~~~Dl~D~~~L~kvF   73 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG--------EGKSVFFVEGDLNDAEALEKLF   73 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC--------CCCceEEEEeccCCHHHHHHHH
Confidence            468999999999999999999999999999984332    2222222111        1467889999999999999999


Q ss_pred             c--CcCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCc-cchhhh
Q 044905           80 G--NAGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISS-FFNNLF  148 (427)
Q Consensus        80 ~--g~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~-~~~~~~  148 (427)
                      .  ..|.|+|.++-...++       +...|+.++++++++|++++++++||.||+++|+....-+... .+. ++.+.|
T Consensus        74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~py  153 (343)
T KOG1371|consen   74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPY  153 (343)
T ss_pred             hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcc
Confidence            7  5799999988554322       7788999999999999999999999999999987765433221 122 245677


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEe--------C-CCCC--------CCCCCCccc--------eEEec-ccccCC--
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIK--------T-SLTE--------DFSPESSYN--------VVVSA-EASVDA--  199 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilR--------P-G~~~--------~~~~~~~~~--------i~~~~-~~~~~~--  199 (427)
                      ++.+ ...|+++..+. ..++.++.||        | |..+        +..+ ....        +...+ +.+...  
T Consensus       154 g~tK-~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p-~v~~vaigr~~~l~v~g~d~~t~dgt  231 (343)
T KOG1371|consen  154 GKTK-KAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLP-YVFQVAIGRRPNLQVVGRDYTTIDGT  231 (343)
T ss_pred             hhhh-HHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccc-cccchhhcccccceeecCcccccCCC
Confidence            7766 67898888877 4568999999        2 2111        1110 0000        11111 111111  


Q ss_pred             -CCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHHhccchhhhHHHHHHHH-HHHH--HHHHH
Q 044905          200 -NDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEK-AEKE--ARIAA  274 (427)
Q Consensus       200 -~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~~~~~~~~-~~ee--a~~~~  274 (427)
                       -..+||+.|.|+..+.++..... ...++||++++..   .++.+|+..+.+..+...-...+.... ..++  +....
T Consensus       232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g---~~V~~lv~a~~k~~g~~~k~~~v~~R~gdv~~~ya~~~~  308 (343)
T KOG1371|consen  232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKG---SSVLELVTAFEKALGVKIKKKVVPRRNGDVAFVYANPSK  308 (343)
T ss_pred             eeecceeeEehHHHHHHHhhccccchheeeEeecCCCC---ccHHHHHHHHHHHhcCCCCccccCCCCCCceeeeeChHH
Confidence             11689999999999999976533 3456999999984   447777777777666554444444311 1122  33333


Q ss_pred             HHHHHHHHHHHhhHHHHh
Q 044905          275 EKAREAAEAATKLEEEVK  292 (427)
Q Consensus       275 ~~a~~~~~~~~~l~~~~~  292 (427)
                      .+.++.||++..|++..+
T Consensus       309 a~~elgwk~~~~iee~c~  326 (343)
T KOG1371|consen  309 AQRELGWKAKYGLQEMLK  326 (343)
T ss_pred             HHHHhCCccccCHHHHHH
Confidence            344566777777766443

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.86  E-value=1.7e-20  Score=184.21  Aligned_cols=231  Identities=12%  Similarity=0.053  Sum_probs=154.7

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +|+||||||++|++|+++|+++|  ++|+++.|...  ....+....         ...++.++.+|++|++++.+++++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~~~~~~~~~~~~   71 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE---------DNPRYRFVKGDIGDRELVSRLFTE   71 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc---------cCCCcEEEEcCCcCHHHHHHHHhh
Confidence            58999999999999999999987  78998887432  111121110         013556899999999999999987


Q ss_pred             --cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCC-eEEEEecccccccccCC--CCCCCCccchhhhh
Q 044905           82 --AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGNTTAASTYN--VLDGISSFFNNLFS  149 (427)
Q Consensus        82 --~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~v~~~~~~~--~~~~~~~~~~~~~~  149 (427)
                        +|+|||+++....+       ...++|+.++.+++++|.+.+++ ++|++||..+|+.....  ..+..+....+.|+
T Consensus        72 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~  151 (317)
T TIGR01181        72 HQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYS  151 (317)
T ss_pred             cCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchH
Confidence              89999999865421       14578888999999999987654 89999998876543221  11111111223455


Q ss_pred             ccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC-CC-cc----------ceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          150 RNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP-ES-SY----------NVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       150 k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~-~~-~~----------~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      ..+ ...|.++..+. +.+++++++||+ .++.... .. ..          .+...+.+  ....+++|++|+|+++..
T Consensus       152 ~sK-~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~D~a~~~~~  228 (317)
T TIGR01181       152 ASK-AASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDG--QQVRDWLYVEDHCRAIYL  228 (317)
T ss_pred             HHH-HHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCC--ceEEeeEEHHHHHHHHHH
Confidence            554 45777766554 678999999997 3332211 00 00          01111111  112369999999999999


Q ss_pred             HhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          216 VFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       216 al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++.+.  ..+++||++++.   ..++.++++.+.+..+
T Consensus       229 ~~~~~--~~~~~~~~~~~~---~~s~~~~~~~i~~~~~  261 (317)
T TIGR01181       229 VLEKG--RVGETYNIGGGN---ERTNLEVVETILELLG  261 (317)
T ss_pred             HHcCC--CCCceEEeCCCC---ceeHHHHHHHHHHHhC
Confidence            88743  357899999987   4566666666655444

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=1.3e-20  Score=188.52  Aligned_cols=238  Identities=11%  Similarity=0.098  Sum_probs=156.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.++|||||||||||++|++.|+++|++|++++|+.+..  ..+.......    .....+++++.+|++|.+.+.+++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~   80 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP----HPNKARMKLHYGDLSDASSLRRWLD   80 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc----ccccCceEEEEecCCCHHHHHHHHH
Confidence            357899999999999999999999999999999876421  1121110000    0001346789999999999999998


Q ss_pred             C--cCEEEEccCCCCCC-----C--CccccHHHHHHHHHHHHHcCCC-----eEEEEecccccccccCCCCCCCCccchh
Q 044905           81 N--AGKVVVTIGPTEDG-----P--TSEVSTSDAFQVIQAAQLAGVG-----HVAIIYDGNTTAASTYNVLDGISSFFNN  146 (427)
Q Consensus        81 g--~d~Vi~~ag~~~~~-----~--~~~vn~~~~~~ll~Aa~~~gVk-----~~V~vSSs~v~~~~~~~~~~~~~~~~~~  146 (427)
                      .  +|+|||+|+.....     +  ..++|+.++.+++++|...+++     +||++||+++|+....+..+..+....+
T Consensus        81 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~  160 (340)
T PLN02653         81 DIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRS  160 (340)
T ss_pred             HcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCC
Confidence            5  69999999864321     1  3467888999999999999876     8999999988765432111211212234


Q ss_pred             hhhccccccHHHHHHHHh-cCCCeEEEEeC-CCCC-----CCCCCCc---------c-ce-EEecccccCCCCCcccHHH
Q 044905          147 LFSRNQPLTVPEFLQKVI-ETDVSYTFIKT-SLTE-----DFSPESS---------Y-NV-VVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~-~~gl~~tilRP-G~~~-----~~~~~~~---------~-~i-~~~~~~~~~~~~~~i~v~D  208 (427)
                      .|+.++ .+.|.++..+. +.++.++..|+ +.+.     ++.....         . .+ ...+.+...  .+++|++|
T Consensus       161 ~Y~~sK-~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~--rd~i~v~D  237 (340)
T PLN02653        161 PYAVAK-VAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDAS--RDWGFAGD  237 (340)
T ss_pred             hhHHHH-HHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcce--ecceeHHH
Confidence            555555 56788777665 56888777775 2221     1111000         0 01 111222222  36999999


Q ss_pred             HHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          209 IASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       209 VA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +|++++.++...   .+..|||++++   ..++.+++..+.+..+
T Consensus       238 ~a~a~~~~~~~~---~~~~yni~~g~---~~s~~e~~~~i~~~~g  276 (340)
T PLN02653        238 YVEAMWLMLQQE---KPDDYVVATEE---SHTVEEFLEEAFGYVG  276 (340)
T ss_pred             HHHHHHHHHhcC---CCCcEEecCCC---ceeHHHHHHHHHHHcC
Confidence            999999998753   25789999998   4556666666655433

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.86  E-value=7.3e-21  Score=187.62  Aligned_cols=223  Identities=12%  Similarity=0.120  Sum_probs=142.8

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHH-HHHHhc-
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AES-IAKAIG-   80 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~s-l~~al~-   80 (427)
                      .|||||||||||++|+++|++.|++++++.|+........    .             ++.+|+.|   .+. +..++. 
T Consensus         1 ~ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~----~-------------~~~~~~~d~~~~~~~~~~~~~~   63 (308)
T PRK11150          1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV----N-------------LVDLDIADYMDKEDFLAQIMAG   63 (308)
T ss_pred             CEEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH----h-------------hhhhhhhhhhhHHHHHHHHhcc
Confidence            3899999999999999999999998888877654321110    0             22334444   333 333432 


Q ss_pred             ----CcCEEEEccCCCCC---CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC-Cccchhhhhc
Q 044905           81 ----NAGKVVVTIGPTED---GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI-SSFFNNLFSR  150 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~---~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~-~~~~~~~~~k  150 (427)
                          ++|+|||+|+....   ++  ..+.|+.++.+++++|++.++ +|||+||+++|+.......++. +..+.+.|+.
T Consensus        64 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~  142 (308)
T PRK11150         64 DDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGY  142 (308)
T ss_pred             cccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHH
Confidence                68999999974322   11  456788999999999999998 6999999998765432222221 1112245666


Q ss_pred             cccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC--Cccce-------EEecc------cccCCCCCcccHHHHHHHH
Q 044905          151 NQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE--SSYNV-------VVSAE------ASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       151 ~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~--~~~~i-------~~~~~------~~~~~~~~~i~v~DVA~~v  213 (427)
                      ++ +.+|+++..+. +.+++++++||+ .++.....  ....+       ...+.      +......+++|++|+|+++
T Consensus       143 sK-~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~  221 (308)
T PRK11150        143 SK-FLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVN  221 (308)
T ss_pred             HH-HHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHH
Confidence            55 55787777665 568999999986 33322110  00000       00010      1111113689999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +.+++..   .+++||++++.   ..++.|++..+.+..+
T Consensus       222 ~~~~~~~---~~~~yni~~~~---~~s~~el~~~i~~~~~  255 (308)
T PRK11150        222 LWFWENG---VSGIFNCGTGR---AESFQAVADAVLAYHK  255 (308)
T ss_pred             HHHHhcC---CCCeEEcCCCC---ceeHHHHHHHHHHHhC
Confidence            8888643   35799999997   5666777777755433

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.86  E-value=2.8e-20  Score=186.81  Aligned_cols=229  Identities=8%  Similarity=0.049  Sum_probs=151.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |+|||||||||||++|+++|+++|+. |+++.|...  ....+.....         ..++.++.+|++|.+++.++++ 
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~   71 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSD---------SERYVFEHADICDRAELDRIFAQ   71 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhccc---------CCceEEEEecCCCHHHHHHHHHh
Confidence            58999999999999999999999976 555554321  1122211100         1245678999999999999997 


Q ss_pred             -CcCEEEEccCCCCC-------CCCccccHHHHHHHHHHHHHc---------CCCeEEEEecccccccccC---------
Q 044905           81 -NAGKVVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLA---------GVGHVAIIYDGNTTAASTY---------  134 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~---------gVk~~V~vSSs~v~~~~~~---------  134 (427)
                       ++|+|||+++....       ....++|+.++.+++++|+..         ++++||++||.++|+....         
T Consensus        72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~  151 (352)
T PRK10084         72 HQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEE  151 (352)
T ss_pred             cCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccccc
Confidence             48999999986432       226789999999999999874         5679999999888764211         


Q ss_pred             -CC-CCCCCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC--c----------cceEEecccccC
Q 044905          135 -NV-LDGISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES--S----------YNVVVSAEASVD  198 (427)
Q Consensus       135 -~~-~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~--~----------~~i~~~~~~~~~  198 (427)
                       +. .+..+....+.|+.++ ...|.++..+. ..|++++++||+ +++......  .          ..+.+.+.+.  
T Consensus       152 ~~~~~E~~~~~p~~~Y~~sK-~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~--  228 (352)
T PRK10084        152 LPLFTETTAYAPSSPYSASK-ASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD--  228 (352)
T ss_pred             CCCccccCCCCCCChhHHHH-HHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCC--
Confidence             00 1111112234566555 56787777654 568999999985 333221100  0          0112222222  


Q ss_pred             CCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          199 ANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       199 ~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ...++||++|+|+++..++.+.  ..+++||+++++.   .++.+++..+.+
T Consensus       229 ~~~~~v~v~D~a~a~~~~l~~~--~~~~~yni~~~~~---~s~~~~~~~i~~  275 (352)
T PRK10084        229 QIRDWLYVEDHARALYKVVTEG--KAGETYNIGGHNE---KKNLDVVLTICD  275 (352)
T ss_pred             eEEeeEEHHHHHHHHHHHHhcC--CCCceEEeCCCCc---CcHHHHHHHHHH
Confidence            1236999999999999888743  3578999999984   445555555443

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.86  E-value=4.4e-20  Score=184.60  Aligned_cols=241  Identities=15%  Similarity=0.191  Sum_probs=158.9

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchH---HHHHHHHhhhhhhhhhhh-ccceEEEecCCC------HH
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAA---QELARLAASYKILSKEEL-KRLNAVESNFDS------AE   73 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~---~~l~~~~~~~~~~~~~~~-~rl~vv~gDl~D------~~   73 (427)
                      +|+|||||||+|++|++.|+++|  ++|++++|+.+..   +.+......+.+...... .++.++.+|+++      .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  7899999987632   222222111111111111 578899999875      35


Q ss_pred             HHHHHhcCcCEEEEccCCCCCC-C---CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC---CCCC---Ccc
Q 044905           74 SIAKAIGNAGKVVVTIGPTEDG-P---TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV---LDGI---SSF  143 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~~~~-~---~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~---~~~~---~~~  143 (427)
                      .+..+..++|+|||+++..... +   ....|+.++.+++++|...++++|+|+||.+++.......   .++.   ...
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~  160 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG  160 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence            6777788999999999865421 1   3468889999999999999999999999998765432111   1111   011


Q ss_pred             chhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC------ccceE----Eec--ccccCCCCCcccHHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPES------SYNVV----VSA--EASVDANDYKVAKSQIA  210 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~------~~~i~----~~~--~~~~~~~~~~i~v~DVA  210 (427)
                      ..+.|+.++ +..|.++......|++++++||| ++++...+.      ...+.    ..+  +.......++++++|+|
T Consensus       161 ~~~~Y~~sK-~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva  239 (367)
T TIGR01746       161 LAGGYAQSK-WVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVA  239 (367)
T ss_pred             cCCChHHHH-HHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHH
Confidence            123455554 55777777666669999999998 443211110      00000    001  11111123689999999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ++++.++.++.. ..+++||++++.   ..++.+++..+.+
T Consensus       240 ~ai~~~~~~~~~~~~~~~~~v~~~~---~~s~~e~~~~i~~  277 (367)
T TIGR01746       240 RAIVALSSQPAASAGGPVFHVVNPE---PVSLDEFLEWLER  277 (367)
T ss_pred             HHHHHHHhCCCcccCCceEEecCCC---CCCHHHHHHHHHH
Confidence            999998875432 127899999987   5667777777765

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.86  E-value=3.7e-20  Score=180.42  Aligned_cols=212  Identities=17%  Similarity=0.151  Sum_probs=146.9

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc--C
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA--G   83 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~--d   83 (427)
                      +|+|||||||+|++|+++|+++||+|++++|+                            .+|+.|.+.+.++++++  |
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------~~d~~~~~~~~~~~~~~~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------QLDLTDPEALERLLRAIRPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------ccCCCCHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999885                            24889999999999876  9


Q ss_pred             EEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhcccccc
Q 044905           84 KVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        84 ~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~l~  155 (427)
                      +|||+++....+.       .+++|+.++.+++++|++.++ +||++||+++|++....+. +..+....+.|+..+ ..
T Consensus        53 ~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K-~~  130 (287)
T TIGR01214        53 AVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSK-LA  130 (287)
T ss_pred             EEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHH-HH
Confidence            9999998654321       356788899999999999886 8999999988765322111 222222234555554 44


Q ss_pred             HHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC-ccce---EEec-ccc--cCCCCCcccHHHHHHHHHHHhcCcccccCcE
Q 044905          156 VPEFLQKVIETDVSYTFIKTS-LTEDFSPES-SYNV---VVSA-EAS--VDANDYKVAKSQIASLVADVFSNTAVAENKV  227 (427)
Q Consensus       156 ~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~-~~~i---~~~~-~~~--~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~  227 (427)
                      +|.++..   .+++++++||+ +++...... ...+   ...+ ...  .....++++++|+|+++..++..+ ...+++
T Consensus       131 ~E~~~~~---~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-~~~~~~  206 (287)
T TIGR01214       131 GEQAIRA---AGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRL-ARARGV  206 (287)
T ss_pred             HHHHHHH---hCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhc-cCCCCe
Confidence            5655544   57899999997 444321100 0000   0000 000  011236899999999999998753 246889


Q ss_pred             EEEecCCCCChhhHHHHHHHHHhccch
Q 044905          228 VKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       228 ~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ||++++.   ..++.|+++.+.+..+.
T Consensus       207 ~ni~~~~---~~s~~e~~~~i~~~~~~  230 (287)
T TIGR01214       207 YHLANSG---QCSWYEFAQAIFEEAGA  230 (287)
T ss_pred             EEEECCC---CcCHHHHHHHHHHHhCc
Confidence            9999988   56667777777655443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.85  E-value=3.7e-20  Score=182.60  Aligned_cols=207  Identities=13%  Similarity=0.116  Sum_probs=138.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      |+||||||+||||++|++.|+++| +|++++|...                        .+.+|++|.+.+.++++  ++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------------~~~~Dl~d~~~~~~~~~~~~~   55 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------------DYCGDFSNPEGVAETVRKIRP   55 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------------cccCCCCCHHHHHHHHHhcCC
Confidence            589999999999999999999999 7998887631                        35689999999999998  58


Q ss_pred             CEEEEccCCCCCC-----C--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC-CCCCCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTEDG-----P--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN-VLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~~-----~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~-~~~~~~~~~~~~~~k~~~l  154 (427)
                      |+|||+++....+     +  ...+|+.++.+++++|+..|+ ++||+||..+|++.... ..+..+..+.+.|+.++ +
T Consensus        56 D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK-~  133 (299)
T PRK09987         56 DVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETK-L  133 (299)
T ss_pred             CEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHH-H
Confidence            9999999876432     1  346889999999999999997 79999999998765322 22222222335676665 5


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCc----------cceEEecc--cccCCCCCcccHHHHHHHHHHHhcCcc
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSPESS----------YNVVVSAE--ASVDANDYKVAKSQIASLVADVFSNTA  221 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~----------~~i~~~~~--~~~~~~~~~i~v~DVA~~v~~al~~~~  221 (427)
                      ..|.++..   ...+++++||+ +++.......          ..+.+.+.  +.+..  .+...+|++.++..++..+.
T Consensus       134 ~~E~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~--~~~~~d~~~~~~~~~~~~~~  208 (299)
T PRK09987        134 AGEKALQE---HCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTG--AELLADCTAHAIRVALNKPE  208 (299)
T ss_pred             HHHHHHHH---hCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCC--HHHHHHHHHHHHHHhhccCC
Confidence            67766644   34578999996 3332211100          01112111  11111  12345566777766665332


Q ss_pred             cccCcEEEEecCCCCChhhHHHHHHHH
Q 044905          222 VAENKVVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       222 ~~~g~~~nI~~~~~~~~~s~~ell~~i  248 (427)
                        .+++||++++..   .++.|++..+
T Consensus       209 --~~giyni~~~~~---~s~~e~~~~i  230 (299)
T PRK09987        209 --VAGLYHLVASGT---TTWHDYAALV  230 (299)
T ss_pred             --CCCeEEeeCCCC---ccHHHHHHHH
Confidence              346999999984   4555555554

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.85  E-value=4.6e-20  Score=200.17  Aligned_cols=235  Identities=14%  Similarity=0.175  Sum_probs=155.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHH--HCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH------HHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLL--REGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA------ESIA   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL--~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~------~sl~   76 (427)
                      |+|||||||||||++|++.|+  ..|++|++++|+... ..+......      ....+++++.+|++|+      +.+.
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~------~~~~~v~~~~~Dl~~~~~~~~~~~~~   73 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAY------WGADRVVPLVGDLTEPGLGLSEADIA   73 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHh------cCCCcEEEEecccCCccCCcCHHHHH
Confidence            589999999999999999999  579999999997542 222111111      0114567899999983      4565


Q ss_pred             HHhcCcCEEEEccCCCCCCC----CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC---Cccchhhhh
Q 044905           77 KAIGNAGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI---SSFFNNLFS  149 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~---~~~~~~~~~  149 (427)
                      .+ .++|+|||+++......    ...+|+.++.+++++|.+.++++|||+||.++++.......+..   +....+.|+
T Consensus        74 ~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~  152 (657)
T PRK07201         74 EL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYH  152 (657)
T ss_pred             Hh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchH
Confidence            55 89999999998654221    45788999999999999999999999999988654322111110   111123455


Q ss_pred             ccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCc-------------cceE-----EecccccCCCCCcccHHHHH
Q 044905          150 RNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPESS-------------YNVV-----VSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       150 k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~-------------~~i~-----~~~~~~~~~~~~~i~v~DVA  210 (427)
                      .++ +..|.++..  ..+++++++||+ .++....+..             ..+.     ...........+++|++|++
T Consensus       153 ~sK-~~~E~~~~~--~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva  229 (657)
T PRK07201        153 RTK-FEAEKLVRE--ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVA  229 (657)
T ss_pred             HHH-HHHHHHHHH--cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHH
Confidence            554 456666543  478999999997 3332111000             0000     00000111123689999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +++..++..+ ...+++||+++++   ..++.|++..+.+..+.
T Consensus       230 ~ai~~~~~~~-~~~g~~~ni~~~~---~~s~~el~~~i~~~~g~  269 (657)
T PRK07201        230 DALDHLMHKD-GRDGQTFHLTDPK---PQRVGDIYNAFARAAGA  269 (657)
T ss_pred             HHHHHHhcCc-CCCCCEEEeCCCC---CCcHHHHHHHHHHHhCC
Confidence            9999888643 3468899999987   56677777777665443

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.85  E-value=1.3e-19  Score=178.66  Aligned_cols=236  Identities=14%  Similarity=0.132  Sum_probs=154.8

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      +|+||||||++|++|++.|+++|++|+++.|.... ...+... ..        ..++.++.+|+.|.+++.+++.  ++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG-ER--------ITRVTFVEGDLRDRELLDRLFEEHKI   71 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh-cc--------ccceEEEECCCCCHHHHHHHHHhCCC
Confidence            58999999999999999999999999988664332 1111110 00        1134578999999999999986  69


Q ss_pred             CEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC-CCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD-GISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~-~~~~~~~~~~~k~~~l  154 (427)
                      |+|||++|.....       ..+..|+.++.+++++|.+.+++++|++||+++|+........ ..+......|+..+ .
T Consensus        72 d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK-~  150 (328)
T TIGR01179        72 DAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSK-L  150 (328)
T ss_pred             cEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHH-H
Confidence            9999999865321       1456788899999999999999999999988876543221111 11111223344333 3


Q ss_pred             cHHHHHHHHh-c-CCCeEEEEeCC-CCCCCCCC--------C--------------ccceEEeccc----ccCCCCCccc
Q 044905          155 TVPEFLQKVI-E-TDVSYTFIKTS-LTEDFSPE--------S--------------SYNVVVSAEA----SVDANDYKVA  205 (427)
Q Consensus       155 ~~E~~l~~l~-~-~gl~~tilRPG-~~~~~~~~--------~--------------~~~i~~~~~~----~~~~~~~~i~  205 (427)
                      ..|.++..+. + .+++++++||+ +++.....        .              ...+...+..    ......++||
T Consensus       151 ~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  230 (328)
T TIGR01179       151 MSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIH  230 (328)
T ss_pred             HHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeee
Confidence            4677776654 3 68999999986 33321100        0              0011111100    0111136899


Q ss_pred             HHHHHHHHHHHhcCcc-cccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          206 KSQIASLVADVFSNTA-VAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       206 v~DVA~~v~~al~~~~-~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++|+|+++..++.... ...+++||+++++   ..++.|++..+.+..+.
T Consensus       231 ~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~---~~s~~ei~~~~~~~~g~  277 (328)
T TIGR01179       231 VMDLADAHLAALEYLLNGGESHVYNLGYGQ---GFSVLEVIEAFKKVSGV  277 (328)
T ss_pred             HHHHHHHHHHHHhhhhcCCCcceEEcCCCC---cccHHHHHHHHHHHhCC
Confidence            9999999998886431 2357899999987   56677777777665443

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.85  E-value=1.3e-19  Score=180.63  Aligned_cols=216  Identities=14%  Similarity=0.171  Sum_probs=149.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++|||||||||||++|++.|+++|  ++|++++|+......+.....         ..++.++.+|++|.+.+.++++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---------~~~~~~v~~Dl~d~~~l~~~~~   73 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---------APCLRFFIGDVRDKERLTRALR   73 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---------CCcEEEEEccCCCHHHHHHHHh
Confidence            56799999999999999999999986  799999988654333321110         1346789999999999999999


Q ss_pred             CcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccc
Q 044905           81 NAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQP  153 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~  153 (427)
                      ++|+|||++|.....       ..+++|+.++.+++++|...|+++||++||....        .+.     +.|+.++ 
T Consensus        74 ~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~--------~p~-----~~Y~~sK-  139 (324)
T TIGR03589        74 GVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAA--------NPI-----NLYGATK-  139 (324)
T ss_pred             cCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCC--------CCC-----CHHHHHH-
Confidence            999999999864321       1457889999999999999999999999876421        111     2344443 


Q ss_pred             ccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCC---C-c-----c--ceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          154 LTVPEFLQKV----IETDVSYTFIKTSLTEDFSPE---S-S-----Y--NVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       154 l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~---~-~-----~--~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                      ...|.++..+    ...|++++++|||.+......   . .     .  .+.+. .+.  ....|+|++|++++++.++.
T Consensus       140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~--~~r~~i~v~D~a~a~~~al~  216 (324)
T TIGR03589       140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPR--MTRFWITLEQGVNFVLKSLE  216 (324)
T ss_pred             HHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCC--ceEeeEEHHHHHHHHHHHHh
Confidence            4567666543    256899999999843221110   0 0     0  01111 111  11258999999999999987


Q ss_pred             CcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          219 NTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       219 ~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ..  ..+.+| +++++   ..++.+++..+..
T Consensus       217 ~~--~~~~~~-~~~~~---~~sv~el~~~i~~  242 (324)
T TIGR03589       217 RM--LGGEIF-VPKIP---SMKITDLAEAMAP  242 (324)
T ss_pred             hC--CCCCEE-ccCCC---cEEHHHHHHHHHh
Confidence            53  245666 45544   4677888877754

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.83  E-value=1.8e-19  Score=177.43  Aligned_cols=225  Identities=11%  Similarity=0.087  Sum_probs=148.2

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----cC
Q 044905            7 VFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----GN   81 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----~g   81 (427)
                      |||||||||+|+++++.|+++|+ +|+++.|..... .+.....             ..+.+|+.|.+.+..+.    .+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~-------------~~~~~d~~~~~~~~~~~~~~~~~   66 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLAD-------------LVIADYIDKEDFLDRLEKGAFGK   66 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhh-------------eeeeccCcchhHHHHHHhhccCC
Confidence            69999999999999999999997 788887665321 1211111             25678888888777765    47


Q ss_pred             cCEEEEccCCCCCC---C--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCc-cchhhhhcccccc
Q 044905           82 AGKVVVTIGPTEDG---P--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISS-FFNNLFSRNQPLT  155 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~---~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~-~~~~~~~k~~~l~  155 (427)
                      +|+|||+++.....   +  ..++|+.++.+++++|.+.++ +||++||+++|+....+..+..+. ...+.|+.++ ..
T Consensus        67 ~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK-~~  144 (314)
T TIGR02197        67 IEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSK-FL  144 (314)
T ss_pred             CCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHH-HH
Confidence            99999999864321   1  456888999999999999987 799999998876543222121111 1234565554 45


Q ss_pred             HHHHHHHH-h--cCCCeEEEEeCC-CCCCCCC--CCcc--------------ceEEeccc----ccCCCCCcccHHHHHH
Q 044905          156 VPEFLQKV-I--ETDVSYTFIKTS-LTEDFSP--ESSY--------------NVVVSAEA----SVDANDYKVAKSQIAS  211 (427)
Q Consensus       156 ~E~~l~~l-~--~~gl~~tilRPG-~~~~~~~--~~~~--------------~i~~~~~~----~~~~~~~~i~v~DVA~  211 (427)
                      .|.++... .  ..+++++++||+ .++....  ....              .+.+.+..    ......+++|++|+++
T Consensus       145 ~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~  224 (314)
T TIGR02197       145 FDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVD  224 (314)
T ss_pred             HHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHH
Confidence            67666542 2  246799999985 3332211  0000              11111100    1111236999999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++..++..   ..+++||+++++   ..++.|++..+.+..+
T Consensus       225 ~i~~~~~~---~~~~~yni~~~~---~~s~~e~~~~i~~~~g  260 (314)
T TIGR02197       225 VNLWLLEN---GVSGIFNLGTGR---ARSFNDLADAVFKALG  260 (314)
T ss_pred             HHHHHHhc---ccCceEEcCCCC---CccHHHHHHHHHHHhC
Confidence            99998875   246799999998   5667777777766544

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02996 fatty acyl-CoA reductase

Probab=99.83  E-value=3.6e-19  Score=187.03  Aligned_cols=245  Identities=12%  Similarity=0.096  Sum_probs=155.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcch---HHHHHHHHhhhhhhh-----------hhhhccceEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGA---AQELARLAASYKILS-----------KEELKRLNAV   65 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~---~~~l~~~~~~~~~~~-----------~~~~~rl~vv   65 (427)
                      ..++|||||||||+|++|++.||+.+   .+|++++|....   .+.+........+++           .....+++++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            35789999999999999999999865   478999997752   122211111111111           0112688999


Q ss_pred             EecCC-------CHHHHHHHhcCcCEEEEccCCCCCCC----CccccHHHHHHHHHHHHHc-CCCeEEEEeccccccccc
Q 044905           66 ESNFD-------SAESIAKAIGNAGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        66 ~gDl~-------D~~sl~~al~g~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~  133 (427)
                      .||++       |.+.+..+++++|+|||+|+......    ...+|+.++.+++++|+.. ++++||++||+.+|+...
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~  169 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKS  169 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCC
Confidence            99998       55667788899999999998765321    5578999999999999986 799999999999876532


Q ss_pred             CCC-----CCCC-------------------------------------------C----ccchhhhhccccccHHHHHH
Q 044905          134 YNV-----LDGI-------------------------------------------S----SFFNNLFSRNQPLTVPEFLQ  161 (427)
Q Consensus       134 ~~~-----~~~~-------------------------------------------~----~~~~~~~~k~~~l~~E~~l~  161 (427)
                      ...     ..+.                                           .    ....+.|+.+| ..+|.++.
T Consensus       170 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK-~~aE~lv~  248 (491)
T PLN02996        170 GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTK-AMGEMLLG  248 (491)
T ss_pred             ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhH-HHHHHHHH
Confidence            100     0000                                           0    00123455555 55777776


Q ss_pred             HHhcCCCeEEEEeCC-CCCCC---CCCCccce------E---Eec-----ccccCCCCCcccHHHHHHHHHHHhcCc--c
Q 044905          162 KVIETDVSYTFIKTS-LTEDF---SPESSYNV------V---VSA-----EASVDANDYKVAKSQIASLVADVFSNT--A  221 (427)
Q Consensus       162 ~l~~~gl~~tilRPG-~~~~~---~~~~~~~i------~---~~~-----~~~~~~~~~~i~v~DVA~~v~~al~~~--~  221 (427)
                      .. ..+++++++||+ .++..   .++|..++      .   ..+     .+......++||++|++++++.++...  .
T Consensus       249 ~~-~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~  327 (491)
T PLN02996        249 NF-KENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG  327 (491)
T ss_pred             Hh-cCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc
Confidence            54 358999999996 33221   12221110      0   001     111112237999999999999887642  1


Q ss_pred             cccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          222 VAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       222 ~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ...+.+||++++... ..++.++++.+.+
T Consensus       328 ~~~~~vYNi~s~~~~-~~s~~ei~~~~~~  355 (491)
T PLN02996        328 QGSEIIYHVGSSLKN-PVKFSNLHDFAYR  355 (491)
T ss_pred             CCCCcEEEecCCCCC-cccHHHHHHHHHH
Confidence            124679999988222 3556666665533

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.83  E-value=1.3e-19  Score=177.73  Aligned_cols=209  Identities=15%  Similarity=0.078  Sum_probs=141.2

Q ss_pred             EEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--CcCEE
Q 044905            8 FVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NAGKV   85 (427)
Q Consensus         8 lItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~d~V   85 (427)
                      ||||||||||++|++.|++.|++|+++.+.                           ..+|++|.+++.+++.  ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------------~~~Dl~~~~~l~~~~~~~~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------------KELDLTRQADVEAFFAKEKPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------------ccCCCCCHHHHHHHHhccCCCEE
Confidence            699999999999999999999988866432                           2469999999999887  47999


Q ss_pred             EEccCCCCC------CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC-----Cc-cchhhhhcc
Q 044905           86 VVTIGPTED------GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI-----SS-FFNNLFSRN  151 (427)
Q Consensus        86 i~~ag~~~~------~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~-----~~-~~~~~~~k~  151 (427)
                      ||+|+....      .+  ..+.|+.++.+++++|++++++++||+||+.+|+.....+.++.     +. .....|+.+
T Consensus        54 ih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s  133 (306)
T PLN02725         54 ILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIA  133 (306)
T ss_pred             EEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHH
Confidence            999986321      11  45678889999999999999999999999998765332211110     11 111235544


Q ss_pred             ccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC--CC----c--------------cceEE-ecccccCCCCCcccHHH
Q 044905          152 QPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP--ES----S--------------YNVVV-SAEASVDANDYKVAKSQ  208 (427)
Q Consensus       152 ~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~--~~----~--------------~~i~~-~~~~~~~~~~~~i~v~D  208 (427)
                      + ...|.+++.+. ..+++++++||+ +++....  +.    .              ..+.. .+.+.  ...++||++|
T Consensus       134 K-~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~--~~~~~i~v~D  210 (306)
T PLN02725        134 K-IAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGS--PLREFLHVDD  210 (306)
T ss_pred             H-HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCC--eeeccccHHH
Confidence            4 45676665554 568999999986 3332110  00    0              00111 11111  1226999999


Q ss_pred             HHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          209 IASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       209 VA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++++++.++.+.  ..++.||++++.   ..++.+++..+.+.
T Consensus       211 v~~~~~~~~~~~--~~~~~~ni~~~~---~~s~~e~~~~i~~~  248 (306)
T PLN02725        211 LADAVVFLMRRY--SGAEHVNVGSGD---EVTIKELAELVKEV  248 (306)
T ss_pred             HHHHHHHHHhcc--ccCcceEeCCCC---cccHHHHHHHHHHH
Confidence            999999988753  235678999887   45566666666543

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.83  E-value=1.4e-19  Score=171.31  Aligned_cols=270  Identities=9%  Similarity=0.087  Sum_probs=178.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ..+|+||||.||||+|||+.|+.+||+|++++---...........        ...+++++..|+..     ..+.++|
T Consensus        27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~--------~~~~fel~~hdv~~-----pl~~evD   93 (350)
T KOG1429|consen   27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI--------GHPNFELIRHDVVE-----PLLKEVD   93 (350)
T ss_pred             CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc--------cCcceeEEEeechh-----HHHHHhh
Confidence            4689999999999999999999999999999865443222211111        13466677777754     4788999


Q ss_pred             EEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccc-------hhhhh
Q 044905           84 KVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFF-------NNLFS  149 (427)
Q Consensus        84 ~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~-------~~~~~  149 (427)
                      .|+|+|++.+.     ++  ....|+.++++++-.|++.| +||++.||+.||+.....+. ....|.       ...|.
T Consensus        94 ~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq-~e~ywg~vnpigpr~cyd  171 (350)
T KOG1429|consen   94 QIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQ-VETYWGNVNPIGPRSCYD  171 (350)
T ss_pred             hhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCC-ccccccccCcCCchhhhh
Confidence            99999987654     22  56788899999999999999 68999999999887432211 011111       11222


Q ss_pred             ccccccHHHHHHHHh-cCCCeEEEEeCC-CCC---CCCCC-----------CccceEEecccccCCCCCcccHHHHHHHH
Q 044905          150 RNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTE---DFSPE-----------SSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       150 k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~---~~~~~-----------~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      -.+ ..+|.++-.+. +.|+.+.|.|+. .++   .+..+           ....+.+.+.+...+  .|.++.|+.+++
T Consensus       172 egK-r~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtR--SF~yvsD~Vegl  248 (350)
T KOG1429|consen  172 EGK-RVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTR--SFQYVSDLVEGL  248 (350)
T ss_pred             HHH-HHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceE--EEEeHHHHHHHH
Confidence            111 45787776665 789999999972 221   11111           112344445554444  599999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhh
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKK  293 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~~~~~~~~~~eea~~~~~~a~~~~~~~~~l~~~~~~  293 (427)
                      ++++.++.   ..-|||+++...+...++|++..+-.....+.+...-+..-......+...++.+.|++...|++++..
T Consensus       249 l~Lm~s~~---~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~~Ddp~kR~pDit~ake~LgW~Pkv~L~egL~~  325 (350)
T KOG1429|consen  249 LRLMESDY---RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENGPDDPRKRKPDITKAKEQLGWEPKVSLREGLPL  325 (350)
T ss_pred             HHHhcCCC---cCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCCCCCccccCccHHHHHHHhCCCCCCcHHHhhHH
Confidence            99998652   344999999977888888888887533333333222111111122344455666788899999997654


Q ss_pred             h
Q 044905          294 L  294 (427)
Q Consensus       294 ~  294 (427)
                      +
T Consensus       326 t  326 (350)
T KOG1429|consen  326 T  326 (350)
T ss_pred             H
Confidence            4

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.82  E-value=9.2e-20  Score=177.37  Aligned_cols=225  Identities=13%  Similarity=0.081  Sum_probs=138.2

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVV   86 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~Vi   86 (427)
                      |||||||||||+++++.|+++|++|++++|++.....+..                 ....++.+ ..+...+.++|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------------~~~~~~~~-~~~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----------------EGYKPWAP-LAESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----------------eeeecccc-cchhhhcCCCCEEE
Confidence            6999999999999999999999999999999865332210                 01112222 34566788999999


Q ss_pred             EccCCCCC-C--------CCccccHHHHHHHHHHHHHcCCCeEEEEecc--cccccccCCCCCCCC-ccchhhhhccccc
Q 044905           87 VTIGPTED-G--------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG--NTTAASTYNVLDGIS-SFFNNLFSRNQPL  154 (427)
Q Consensus        87 ~~ag~~~~-~--------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs--~v~~~~~~~~~~~~~-~~~~~~~~k~~~l  154 (427)
                      |+++.... +        ...+.|+.++.+++++|+.+++++.+|++++  ++|+.....+..+.. ....+++.+.. .
T Consensus        63 h~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~-~  141 (292)
T TIGR01777        63 NLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELC-R  141 (292)
T ss_pred             ECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHH-H
Confidence            99986432 1        1345688899999999999998544444433  344432222221111 11112222221 1


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCC--CCcc---ceEEec-ccccCCCCCcccHHHHHHHHHHHhcCcccccCcE
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSP--ESSY---NVVVSA-EASVDANDYKVAKSQIASLVADVFSNTAVAENKV  227 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~--~~~~---~i~~~~-~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~  227 (427)
                      ..|..+..+.+.+++++++||+ +++....  ....   ...... .+......++||++|+|+++..++.++.  .+++
T Consensus       142 ~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~--~~g~  219 (292)
T TIGR01777       142 DWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENAS--ISGP  219 (292)
T ss_pred             HHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcc--cCCc
Confidence            2454444444578999999997 3333110  0000   000001 0111122379999999999999997642  3578


Q ss_pred             EEEecCCCCChhhHHHHHHHHHhccchh
Q 044905          228 VKVFTDPSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       228 ~nI~~~~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      ||+++++   ..++.|++..+.+..+.+
T Consensus       220 ~~~~~~~---~~s~~di~~~i~~~~g~~  244 (292)
T TIGR01777       220 VNATAPE---PVRNKEFAKALARALHRP  244 (292)
T ss_pred             eEecCCC---ccCHHHHHHHHHHHhCCC
Confidence            9999987   567777777776655543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK05865 hypothetical protein; Provisional

Probab=99.82  E-value=1.6e-19  Score=197.87  Aligned_cols=196  Identities=14%  Similarity=0.185  Sum_probs=145.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+|||||||||++|++.|+++|++|++++|+....  + .             .++.++.+|+.|.+++.++++++|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~-~-------------~~v~~v~gDL~D~~~l~~al~~vD~   64 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W-P-------------SSADFIAADIRDATAVESAMTGADV   64 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c-c-------------cCceEEEeeCCCHHHHHHHHhCCCE
Confidence            5899999999999999999999999999999975321  1 0             1235899999999999999999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI  164 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~  164 (427)
                      |||+++...  +..++|+.++.+++++|+++|+++|||+||.+                      |   ..+|.++.   
T Consensus        65 VVHlAa~~~--~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~----------------------K---~aaE~ll~---  114 (854)
T PRK05865         65 VAHCAWVRG--RNDHINIDGTANVLKAMAETGTGRIVFTSSGH----------------------Q---PRVEQMLA---  114 (854)
T ss_pred             EEECCCccc--chHHHHHHHHHHHHHHHHHcCCCeEEEECCcH----------------------H---HHHHHHHH---
Confidence            999998643  25688999999999999999999999998652                      1   23565553   


Q ss_pred             cCCCeEEEEeCC-CCCCCCCCCccc---eEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhh
Q 044905          165 ETDVSYTFIKTS-LTEDFSPESSYN---VVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR  240 (427)
Q Consensus       165 ~~gl~~tilRPG-~~~~~~~~~~~~---i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s  240 (427)
                      +.+++++++||+ +++.....+...   ....+.+......++||++|+|+++..++..+ ...+++|||+++.   ..+
T Consensus       115 ~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~-~~~ggvyNIgsg~---~~S  190 (854)
T PRK05865        115 DCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT-VIDSGPVNLAAPG---ELT  190 (854)
T ss_pred             HcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC-CcCCCeEEEECCC---ccc
Confidence            479999999997 444321111111   11111122222336999999999999888643 2357899999998   456


Q ss_pred             HHHHHHHHHh
Q 044905          241 VDELFSAIAE  250 (427)
Q Consensus       241 ~~ell~~i~~  250 (427)
                      +.+++..+.+
T Consensus       191 i~EIae~l~~  200 (854)
T PRK05865        191 FRRIAAALGR  200 (854)
T ss_pred             HHHHHHHHhh
Confidence            6667666644

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.81  E-value=2.9e-18  Score=163.62  Aligned_cols=230  Identities=11%  Similarity=0.067  Sum_probs=158.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+||||||.||||+++++.++++.  ++|+.++.=--  ....|..         -.+.+++.++++|+.|.+.+.++|.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~---------~~~~~~~~fv~~DI~D~~~v~~~~~   71 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD---------VEDSPRYRFVQGDICDRELVDRLFK   71 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh---------hhcCCCceEEeccccCHHHHHHHHH
Confidence            689999999999999999999986  56777763221  1222211         1224678899999999999999998


Q ss_pred             --CcCEEEEccCCCCC-------CCCccccHHHHHHHHHHHHHcCCC-eEEEEecccccccccCC--CCCCCCcc-chhh
Q 044905           81 --NAGKVVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGNTTAASTYN--VLDGISSF-FNNL  147 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~v~~~~~~~--~~~~~~~~-~~~~  147 (427)
                        ..|+|+|.|+-+-.       .++.+.|+.|+.+||+|+++...+ +|++||+--||++-...  ...+.+++ +.+.
T Consensus        72 ~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSP  151 (340)
T COG1088          72 EYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSP  151 (340)
T ss_pred             hcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCC
Confidence              58999999985432       337899999999999999998864 89999999998775543  22232332 3355


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC-CCc-----------cceEEecccccCCCCCcccHHHHHHHH
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP-ESS-----------YNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~-~~~-----------~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      |+.++ .+.+.+.++.. ..|++++|.|+. -++++.. +.+           .++.+.|.+...+  +|++++|-++++
T Consensus       152 YSASK-AasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iR--DWl~VeDh~~ai  228 (340)
T COG1088         152 YSASK-AASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIR--DWLYVEDHCRAI  228 (340)
T ss_pred             cchhh-hhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCccee--eeEEeHhHHHHH
Confidence            66555 33444445544 579999999983 2222211 111           1233334333333  699999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHH
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i  248 (427)
                      -.++... . .|++|||+++...+..++.+++-.+
T Consensus       229 ~~Vl~kg-~-~GE~YNIgg~~E~~Nlevv~~i~~~  261 (340)
T COG1088         229 DLVLTKG-K-IGETYNIGGGNERTNLEVVKTICEL  261 (340)
T ss_pred             HHHHhcC-c-CCceEEeCCCccchHHHHHHHHHHH
Confidence            9999854 3 5999999999855554444444333

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.79  E-value=3.6e-18  Score=152.61  Aligned_cols=205  Identities=19%  Similarity=0.248  Sum_probs=145.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |||.|+||||.+|++|+++++.+||+|++++|++++....               ..+.+++.|+.|+.++...+.|.|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------------~~~~i~q~Difd~~~~a~~l~g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------------QGVTILQKDIFDLTSLASDLAGHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------------ccceeecccccChhhhHhhhcCCce
Confidence            6999999999999999999999999999999999876443               2235899999999999999999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc-ccccccCCCCCCCCccchhhhhccccccHHHHHHHH
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN-TTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV  163 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~-v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l  163 (427)
                      ||.+.+....+. ..........|++..+.+|+.|++.+.-.+ .+.+.. ...-..+.++..++.-.  +...+.|+.+
T Consensus        66 VIsA~~~~~~~~-~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~ey~~~A--~~~ae~L~~L  141 (211)
T COG2910          66 VISAFGAGASDN-DELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPAEYKPEA--LAQAEFLDSL  141 (211)
T ss_pred             EEEeccCCCCCh-hHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCchhHHHHH--HHHHHHHHHH
Confidence            999998774333 233333567789999999999999885222 222222 22222233333333222  2355677777


Q ss_pred             h-cCCCeEEEEeCC-CCCCCCCCCccceEEecccc--cCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEe
Q 044905          164 I-ETDVSYTFIKTS-LTEDFSPESSYNVVVSAEAS--VDANDYKVAKSQIASLVADVFSNTAVAENKVVKVF  231 (427)
Q Consensus       164 ~-~~gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~--~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~  231 (427)
                      + +..++||++-|. ++.+  .+..++..+.+..-  ...+.++|+..|.|-+++..++++ .+.++.|.+.
T Consensus       142 r~~~~l~WTfvSPaa~f~P--GerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~-~h~rqRftv~  210 (211)
T COG2910         142 RAEKSLDWTFVSPAAFFEP--GERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKP-QHIRQRFTVA  210 (211)
T ss_pred             hhccCcceEEeCcHHhcCC--ccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhcc-cccceeeeec
Confidence            7 556999999997 4444  22344555544221  233457999999999999999976 4567777664

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.78  E-value=8.1e-19  Score=168.59  Aligned_cols=167  Identities=14%  Similarity=0.200  Sum_probs=103.7

Q ss_pred             EEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchH---HHHHHHHhhhhhhhhh---hhccceEEEecCCCH------HH
Q 044905            9 VAGATGQAGVRIAQTLLREGF--SVRAGVPELGAA---QELARLAASYKILSKE---ELKRLNAVESNFDSA------ES   74 (427)
Q Consensus         9 ItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~---~~l~~~~~~~~~~~~~---~~~rl~vv~gDl~D~------~s   74 (427)
                      |||||||+|++|+.+|++++.  +|++++|+.+..   +.+.....++.+....   ..+|+.++.||++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  999999988643   3333333333333332   368999999999973      55


Q ss_pred             HHHHhcCcCEEEEccCCCCCC----CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC----------CC
Q 044905           75 IAKAIGNAGKVVVTIGPTEDG----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD----------GI  140 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~----------~~  140 (427)
                      +..+.+.+|+|||+++.....    .....|+.|+.++++.|.....++|+|+||+.+.+.......+          ..
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~  160 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP  160 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence            666678899999999976543    2568899999999999998777799999995443222211100          01


Q ss_pred             CccchhhhhccccccHHHHHHHHhcC-CCeEEEEeCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVIET-DVSYTFIKTS  176 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~~~-gl~~tilRPG  176 (427)
                      .....+.|..+| +.+|.++....+. |++++|+|||
T Consensus       161 ~~~~~~gY~~SK-~~aE~~l~~a~~~~g~p~~I~Rp~  196 (249)
T PF07993_consen  161 PQGFPNGYEQSK-WVAERLLREAAQRHGLPVTIYRPG  196 (249)
T ss_dssp             -TTSEE-HHHHH-HHHHHHHHHHHHHH---EEEEEE-
T ss_pred             hccCCccHHHHH-HHHHHHHHHHHhcCCceEEEEecC
Confidence            112235666665 7789998887754 9999999998

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.78  E-value=6.5e-19  Score=177.37  Aligned_cols=319  Identities=24%  Similarity=0.306  Sum_probs=188.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCH-HHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSA-ESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al   79 (427)
                      +++++|+|+||||.+|+.+++.|+++||.|++++|+.++...+.. ...         ...+..+..+.... +.+....
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~---------d~~~~~v~~~~~~~~d~~~~~~  147 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFV---------DLGLQNVEADVVTAIDILKKLV  147 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhccccc---------ccccceeeeccccccchhhhhh
Confidence            467789999999999999999999999999999999987766644 111         12334566655443 3333333


Q ss_pred             cC----cCEEEEccCCCCCC----CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchh-hhhc
Q 044905           80 GN----AGKVVVTIGPTEDG----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNN-LFSR  150 (427)
Q Consensus        80 ~g----~d~Vi~~ag~~~~~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~-~~~k  150 (427)
                      ..    ..+++.++|..+..    ....+++.+++|+++||+.+|++|++++||.+.   .+..  .+.+....+ ...+
T Consensus       148 ~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~---~~~~--~~~~~~~~~~~~~~  222 (411)
T KOG1203|consen  148 EAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGG---TKFN--QPPNILLLNGLVLK  222 (411)
T ss_pred             hhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecC---cccC--CCchhhhhhhhhhH
Confidence            32    34666666654432    235799999999999999999999999987762   2221  111111101 1111


Q ss_pred             cccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEeccc---ccCCCCCcccHHHHHHHHHHHhcCcccccCcE
Q 044905          151 NQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEA---SVDANDYKVAKSQIASLVADVFSNTAVAENKV  227 (427)
Q Consensus       151 ~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~---~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~  227 (427)
                      ++ +.+|.   .+.++|++|+|||||.+.+...+. ..+......   ....+...|+..|||+.++.++.++.....++
T Consensus       223 ~k-~~~e~---~~~~Sgl~ytiIR~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~  297 (411)
T KOG1203|consen  223 AK-LKAEK---FLQDSGLPYTIIRPGGLEQDTGGQ-REVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKV  297 (411)
T ss_pred             HH-HhHHH---HHHhcCCCcEEEeccccccCCCCc-ceecccCccccccccccceeeehhhHHHHHHHHHhhhhhcccee
Confidence            11 23443   344799999999998544433322 222222211   11222247999999999999988765555588


Q ss_pred             EEEecCCCCChhhHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhHHHHhhhcHHHHHHHhhHH
Q 044905          228 VKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAA-EAATKLEEEVKKLSEQEAKAASLAE  306 (427)
Q Consensus       228 ~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~~~~~~~~~~eea~~~~~~a~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~  306 (427)
                      ++++.....+...+..++..+........|.-.........-.......+..+. --...++.+..+.-   ....++..
T Consensus       298 ~~~v~~~~gpg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~---~~~~~~~~  374 (411)
T KOG1203|consen  298 VELVLKPEGPGRPYKVLLELFPLDESSQTYPVFAARPTEAGFCRVVPFSAFRPANKEDPPLDPGLSERP---ARFSSLIQ  374 (411)
T ss_pred             EEeecCCCCCCccHHHHHhhcccccccccccceeccccccceeEecccccccccccccCccccccccCc---chhhhhcc
Confidence            888888888888888888887654333333322221111111000000000000 00011111111111   22225555


Q ss_pred             HHHHhhhhcCCCHHHHHHhhcccCCCCchhhhhhhH
Q 044905          307 EAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQI  342 (427)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (427)
                      ..++..-++.-+..-+-...|+|-+.-.|++..+|.
T Consensus       375 d~~~~~~~~~~t~~~~~~~~~~i~a~~~~~~~~~~~  410 (411)
T KOG1203|consen  375 DPVDGLAGEQQTLDYFSNKLKDIKALKAPQETDFIL  410 (411)
T ss_pred             CCCcccccccccccccccchhhhhhhcCchhhcccc
Confidence            566666666677777777778888888888876654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.77  E-value=2.7e-17  Score=159.62  Aligned_cols=220  Identities=17%  Similarity=0.213  Sum_probs=144.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +++||||||||+||++|++.|+++|++|+++.|+++....+....          ..++.++.+|++|.+++.+++.   
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~   71 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----------GDRLWVLQLDVTDSAAVRAVVDRAF   71 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------cCceEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999976655443221          1345689999999998887664   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|+|||++|....++           .+++|+.++.++++++    ++.+.++||++||.+....     ..+. 
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~-  145 (276)
T PRK06482         72 AALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----YPGF-  145 (276)
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----CCCC-
Confidence                4799999999754322           3457888999999987    5667889999988652111     1111 


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCC-CCCCCCCcc--ceEEecc-----c----ccCCCCCccc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLT-EDFSPESSY--NVVVSAE-----A----SVDANDYKVA  205 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~-~~~~~~~~~--~i~~~~~-----~----~~~~~~~~i~  205 (427)
                          ..|+.++ .+.+.+.+.+.    ..|++++++|||.+ .++......  .+.....     .    .......+.+
T Consensus       146 ----~~Y~~sK-~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  220 (276)
T PRK06482        146 ----SLYHATK-WGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGD  220 (276)
T ss_pred             ----chhHHHH-HHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCC
Confidence                2333332 33555555544    46999999999854 222111000  0000000     0    0000012368


Q ss_pred             HHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          206 KSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      .+|++++++.++..+  ..+..|+++++.   ..++.+++..+.
T Consensus       221 ~~~~~~a~~~~~~~~--~~~~~~~~g~~~---~~~~~~~~~~~~  259 (276)
T PRK06482        221 PQKMVQAMIASADQT--PAPRRLTLGSDA---YASIRAALSERL  259 (276)
T ss_pred             HHHHHHHHHHHHcCC--CCCeEEecChHH---HHHHHHHHHHHH
Confidence            999999999988643  235678998886   556666666553

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.76  E-value=5.8e-18  Score=160.55  Aligned_cols=230  Identities=11%  Similarity=0.064  Sum_probs=145.8

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-CcCEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-NAGKV   85 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-g~d~V   85 (427)
                      |+||||||+||++|+..|.+.||+|++++|++.+........+                .    ..+.+.+... +||+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v----------------~----~~~~~~~~~~~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNV----------------T----LWEGLADALTLGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCccc----------------c----ccchhhhcccCCCCEE
Confidence            6899999999999999999999999999999987554322111                1    1233444444 79999


Q ss_pred             EEccCCCCCCC---------CccccHHHHHHHHHHHHHcCCCeEEEEecccc--cccccCCCCCCCCccchhhhhccccc
Q 044905           86 VVTIGPTEDGP---------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNT--TAASTYNVLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        86 i~~ag~~~~~~---------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v--~~~~~~~~~~~~~~~~~~~~~k~~~l  154 (427)
                      ||.||..-.+.         ..+.....+..+.++.....-+.=+|||.|++  |+.......++..++.....+..- .
T Consensus        61 INLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc-~  139 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLC-Q  139 (297)
T ss_pred             EECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHH-H
Confidence            99999654322         23344557888888887655443355666655  444333222222222221111110 1


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCc------cceEEeccc-ccCCCCCcccHHHHHHHHHHHhcCcccccCcE
Q 044905          155 TVPEFLQKVIETDVSYTFIKTSLTEDFSPESS------YNVVVSAEA-SVDANDYKVAKSQIASLVADVFSNTAVAENKV  227 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~------~~i~~~~~~-~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~  227 (427)
                      .+|+........|.+++++|.|.+-....+..      +.+-+.|.. +...-++|||++|+.+++..++++..  -.+.
T Consensus       140 ~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~--lsGp  217 (297)
T COG1090         140 DWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ--LSGP  217 (297)
T ss_pred             HHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC--CCCc
Confidence            35554444446789999999873211111111      112222221 11122369999999999999998753  4688


Q ss_pred             EEEecCCCCChhhHHHHHHHHHhccchhhhHHHHH
Q 044905          228 VKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALA  262 (427)
Q Consensus       228 ~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~~~~~  262 (427)
                      ||++.+.   +.+..++...+++..+|+.+....+
T Consensus       218 ~N~taP~---PV~~~~F~~al~r~l~RP~~~~vP~  249 (297)
T COG1090         218 FNLTAPN---PVRNKEFAHALGRALHRPAILPVPS  249 (297)
T ss_pred             ccccCCC---cCcHHHHHHHHHHHhCCCccccCcH
Confidence            9999998   6777888899988888887776555

>PLN02778 3,5-epimerase/4-reductase

Probab=99.76  E-value=1.5e-17  Score=164.15  Aligned_cols=206  Identities=11%  Similarity=0.126  Sum_probs=128.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      .|+|||||||||||++|++.|+++|++|+...++                               +.|.+.+...+.  +
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~-------------------------------~~~~~~v~~~l~~~~   57 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGR-------------------------------LENRASLEADIDAVK   57 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCc-------------------------------cCCHHHHHHHHHhcC
Confidence            4689999999999999999999999999754332                               233344444444  6


Q ss_pred             cCEEEEccCCCCC--------CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-C------CCCCCCc-c
Q 044905           82 AGKVVVTIGPTED--------GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-N------VLDGISS-F  143 (427)
Q Consensus        82 ~d~Vi~~ag~~~~--------~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-~------~~~~~~~-~  143 (427)
                      +|+|||+|+....        .+  ...+|+.++.+++++|++.|+++ +++||+++|+.... +      ..+..++ .
T Consensus        58 ~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~-v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~  136 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVL-TNYATGCIFEYDDAHPLGSGIGFKEEDTPNF  136 (298)
T ss_pred             CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCE-EEEecceEeCCCCCCCcccCCCCCcCCCCCC
Confidence            8999999987532        11  45689999999999999999964 55666666543210 0      1111111 1


Q ss_pred             chhhhhccccccHHHHHHHHhcCCCeEEEEeCCC-CCCC-CC--CCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          144 FNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSL-TEDF-SP--ESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~-~~~~-~~--~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      ..+.|+.+| +..|.++..+.    ++.++|++. .... ..  .....+ ..+......+.++++++|++++++.++..
T Consensus       137 ~~s~Yg~sK-~~~E~~~~~y~----~~~~lr~~~~~~~~~~~~~~fi~~~-~~~~~~~~~~~s~~yv~D~v~al~~~l~~  210 (298)
T PLN02778        137 TGSFYSKTK-AMVEELLKNYE----NVCTLRVRMPISSDLSNPRNFITKI-TRYEKVVNIPNSMTILDELLPISIEMAKR  210 (298)
T ss_pred             CCCchHHHH-HHHHHHHHHhh----ccEEeeecccCCcccccHHHHHHHH-HcCCCeeEcCCCCEEHHHHHHHHHHHHhC
Confidence            225666665 56777775542    456777642 2111 00  000111 11111111122599999999999998864


Q ss_pred             cccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          220 TAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       220 ~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      .   .+++||++++.   ..++.|++..+.+..+
T Consensus       211 ~---~~g~yNigs~~---~iS~~el~~~i~~~~~  238 (298)
T PLN02778        211 N---LTGIYNFTNPG---VVSHNEILEMYRDYID  238 (298)
T ss_pred             C---CCCeEEeCCCC---cccHHHHHHHHHHHhC
Confidence            2   24699999988   4556666666655444

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.76  E-value=4.5e-17  Score=162.38  Aligned_cols=221  Identities=14%  Similarity=0.123  Sum_probs=145.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchH---HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAA---QELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~---~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      +.+.+++||||+||+|+||++.|++++  .+|++++..+...   .+....          ...++..+.+|+.|...+.
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~----------~~~~v~~~~~D~~~~~~i~   71 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF----------RSGRVTVILGDLLDANSIS   71 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc----------cCCceeEEecchhhhhhhh
Confidence            567799999999999999999999998  8999999887521   111100          1456778999999999999


Q ss_pred             HHhcCcCEEEEccC-CCCC------CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC--C--CCCCCCccch
Q 044905           77 KAIGNAGKVVVTIG-PTED------GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY--N--VLDGISSFFN  145 (427)
Q Consensus        77 ~al~g~d~Vi~~ag-~~~~------~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~--~--~~~~~~~~~~  145 (427)
                      ++++++ .|+|+++ +...      +..+++|+.|+.+++++|.+.||+++||+||..|..+...  +  +..+.+.-..
T Consensus        72 ~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~  150 (361)
T KOG1430|consen   72 NAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHI  150 (361)
T ss_pred             hhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccc
Confidence            999999 5555554 4332      2377899999999999999999999999999988554433  1  1222221112


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc---------cc-eEEecccccCCCCCcccHHHHHHHH
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS---------YN-VVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~---------~~-i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..|+.++ ..+|.+..... ..++..+.|||. .++.......         +. +...+.....  .++++.+.|+-+.
T Consensus       151 d~Y~~sK-a~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~--~~~~~~~Nva~ah  227 (361)
T KOG1430|consen  151 DPYGESK-ALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENL--NDFTYGENVAWAH  227 (361)
T ss_pred             cccchHH-HHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccc--cceEEechhHHHH
Confidence            4666665 44666655543 345899999984 4333211100         01 1111222111  2466666555544


Q ss_pred             HH---Hhc-CcccccCcEEEEecCCCC
Q 044905          214 AD---VFS-NTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       214 ~~---al~-~~~~~~g~~~nI~~~~~~  236 (427)
                      +.   +|. ..+...|+.|.|.++...
T Consensus       228 ilA~~aL~~~~~~~~Gq~yfI~d~~p~  254 (361)
T KOG1430|consen  228 ILAARALLDKSPSVNGQFYFITDDTPV  254 (361)
T ss_pred             HHHHHHHHhcCCccCceEEEEeCCCcc
Confidence            32   233 444678999999998743

>PRK12320 hypothetical protein; Provisional

Probab=99.76  E-value=1.2e-17  Score=179.76  Aligned_cols=198  Identities=14%  Similarity=0.154  Sum_probs=137.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|||||||||||++|++.|+++||+|++++|.+..   ..             ..+++++.+|+.|.. +.+++.++|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~---~~-------------~~~ve~v~~Dl~d~~-l~~al~~~D~   63 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD---AL-------------DPRVDYVCASLRNPV-LQELAGEADA   63 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh---cc-------------cCCceEEEccCCCHH-HHHHhcCCCE
Confidence            589999999999999999999999999999987532   10             123468999999985 7888899999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI  164 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~  164 (427)
                      |||+++.....+ ..+|+.++.|++++|+++|+ ++||+||..  +. . .           .|.     ..|.++.   
T Consensus        64 VIHLAa~~~~~~-~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~--G~-~-~-----------~~~-----~aE~ll~---  118 (699)
T PRK12320         64 VIHLAPVDTSAP-GGVGITGLAHVANAAARAGA-RLLFVSQAA--GR-P-E-----------LYR-----QAETLVS---  118 (699)
T ss_pred             EEEcCccCccch-hhHHHHHHHHHHHHHHHcCC-eEEEEECCC--CC-C-c-----------ccc-----HHHHHHH---
Confidence            999998754332 45788899999999999998 688888653  11 0 0           011     1454443   


Q ss_pred             cCCCeEEEEeCC-CCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhH
Q 044905          165 ETDVSYTFIKTS-LTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRV  241 (427)
Q Consensus       165 ~~gl~~tilRPG-~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~  241 (427)
                      ..+++++++|++ .++.........++..  .......++.+||++|++++++.+++..   .+++|||+++.   ..++
T Consensus       119 ~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~---~~GiyNIG~~~---~~Si  192 (699)
T PRK12320        119 TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTD---RNGVVDLATPD---TTNV  192 (699)
T ss_pred             hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCC---CCCEEEEeCCC---eeEH
Confidence            367999999996 3433211000010000  0001122334679999999999988743   24599999998   5666


Q ss_pred             HHHHHHHHh
Q 044905          242 DELFSAIAE  250 (427)
Q Consensus       242 ~ell~~i~~  250 (427)
                      .+++..+..
T Consensus       193 ~el~~~i~~  201 (699)
T PRK12320        193 VTAWRLLRS  201 (699)
T ss_pred             HHHHHHHHH
Confidence            666666644

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=6.9e-17  Score=152.78  Aligned_cols=213  Identities=18%  Similarity=0.192  Sum_probs=137.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |++++|+||||||++|++|++.|+++|++|+++.|+.... ..+......       ...++.++.+|+.|.+++.++++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~   76 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA-------LGRRAQAVQADVTDKAALEAAVA   76 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-------cCCceEEEECCcCCHHHHHHHHH
Confidence            4567999999999999999999999999998888876532 222111110       12356789999999999888774


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|+|||++|.....+           ...+|+.+..++++++    +..+++++|++||.+.+.+..     
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~-----  151 (249)
T PRK12825         77 AAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP-----  151 (249)
T ss_pred             HHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC-----
Confidence                   5799999999654322           3456777788887776    566789999999877432211     


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC-CCCCCCccceEEec-ccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE-DFSPESSYNVVVSA-EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~-~~~~~~~~~i~~~~-~~~~~~~~~~i~v~DVA~~  212 (427)
                      +..     .|...+ ...+.+.+.+    ...+++++++|||.+. +............. ......  .+++.+|++++
T Consensus       152 ~~~-----~y~~sK-~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  223 (249)
T PRK12825        152 GRS-----NYAAAK-AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLG--RSGTPEDIARA  223 (249)
T ss_pred             Cch-----HHHHHH-HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCC--CCcCHHHHHHH
Confidence            111     122211 1233333332    3468999999998443 32211100000000 011111  38899999999


Q ss_pred             HHHHhcCcc-cccCcEEEEecCC
Q 044905          213 VADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      +..++.+.. ...|++|++.++.
T Consensus       224 ~~~~~~~~~~~~~g~~~~i~~g~  246 (249)
T PRK12825        224 VAFLCSDASDYITGQVIEVTGGV  246 (249)
T ss_pred             HHHHhCccccCcCCCEEEeCCCE
Confidence            999986542 3468999999875

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.75  E-value=5.6e-18  Score=166.25  Aligned_cols=211  Identities=14%  Similarity=0.126  Sum_probs=132.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--A   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--~   82 (427)
                      |+||||||||++|++|++.|..+|++|+++.|+                            ..|++|.+.+.+.+..  .
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------------~~dl~d~~~~~~~~~~~~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS----------------------------DLDLTDPEAVAKLLEAFKP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------------CS-TTSHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------------hcCCCCHHHHHHHHHHhCC
Confidence            799999999999999999999999999999776                            1378899999998874  7


Q ss_pred             CEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~~k~~~l  154 (427)
                      |+||||++....     +  ..+.+|+.++.+|+++|...|+ ++||+||..|+.|....+ .+...+.+.+.|++.+ +
T Consensus        53 d~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K-~  130 (286)
T PF04321_consen   53 DVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSK-L  130 (286)
T ss_dssp             SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHH-H
T ss_pred             CeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHH-H
Confidence            999999987643     1  2567888999999999999997 899999999987764432 2333333447888876 6


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCCC-CCCCCCCCccce---EEecc-cc--cCCCCCcccHHHHHHHHHHHhcCcc--cccC
Q 044905          155 TVPEFLQKVIETDVSYTFIKTSL-TEDFSPESSYNV---VVSAE-AS--VDANDYKVAKSQIASLVADVFSNTA--VAEN  225 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG~-~~~~~~~~~~~i---~~~~~-~~--~~~~~~~i~v~DVA~~v~~al~~~~--~~~g  225 (427)
                      ..|+.+..   ..-+++|+|++. ++.....+...+   ...+. ..  .+.-.+++++.|+|+++..++.+..  ....
T Consensus       131 ~~E~~v~~---~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~  207 (286)
T PF04321_consen  131 EGEQAVRA---ACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPW  207 (286)
T ss_dssp             HHHHHHHH---H-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-
T ss_pred             HHHHHHHH---hcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccc
Confidence            67765544   233899999873 333111111000   00000 00  1111257999999999999987531  1346


Q ss_pred             cEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          226 KVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       226 ~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++||+++++   ..++.|+...+.+.
T Consensus       208 Giyh~~~~~---~~S~~e~~~~i~~~  230 (286)
T PF04321_consen  208 GIYHLSGPE---RVSRYEFAEAIAKI  230 (286)
T ss_dssp             EEEE---BS----EEHHHHHHHHHHH
T ss_pred             eeEEEecCc---ccCHHHHHHHHHHH
Confidence            999999998   45556666655443

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.74  E-value=1.5e-16  Score=152.00  Aligned_cols=214  Identities=15%  Similarity=0.084  Sum_probs=135.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |..++|+||||||++|++|+++|+++|++|++++|++++...+......       ...++.++.+|++|.+++.+++. 
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   74 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK-------AGGKAIGVAMDVTDEEAINAGIDY   74 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            5668999999999999999999999999999999998765544322111       12356689999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHH----HHHHHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDA----FQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~----~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|......           .+.+|+.++    ..++.++++.+.++||++||...+.+.     .+
T Consensus        75 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~  149 (258)
T PRK12429         75 AVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS-----AG  149 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----CC
Confidence                  5899999998654322           234566664    444555566788999999887633221     11


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCC-CCccc------eEEec-----ccccCCCCCc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSP-ESSYN------VVVSA-----EASVDANDYK  203 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~-~~~~~------i~~~~-----~~~~~~~~~~  203 (427)
                      ...|....      .+.+.+.+.    +...+++++++|||.+..... .....      +....     .........+
T Consensus       150 ~~~y~~~k------~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (258)
T PRK12429        150 KAAYVSAK------HGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRF  223 (258)
T ss_pred             cchhHHHH------HHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCcccc
Confidence            22222111      112333332    335689999999985543211 10000      00000     0001111258


Q ss_pred             ccHHHHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      ++++|+|+++..++.... ...++.|++.++
T Consensus       224 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        224 TTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             CCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            999999999998886532 235788888776

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.74  E-value=1.5e-16  Score=151.28  Aligned_cols=215  Identities=15%  Similarity=0.132  Sum_probs=137.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||++|.+|++.|+++|++|++++|++++...+......       ...++.++.+|+.|.+++.++++ 
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA-------AGGKARARQVDVRDRAALKAAVAA   76 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999997654433221111       12346789999999999888875 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .+|+|||++|.....+           ....|+.+..++++++    ...+.++||++||.+.+..    ....
T Consensus        77 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----~~~~  152 (251)
T PRK12826         77 GVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----GYPG  152 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----CCCC
Confidence                  5899999998765322           3456677777888776    3456789999987763200    0011


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCC-CCCCCCccceEEecccccCCC-CCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTE-DFSPESSYNVVVSAEASVDAN-DYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~-~~~~~~~~~i~~~~~~~~~~~-~~~i~v~DVA~~v  213 (427)
                      ..     .|...+ .+.+.+++.+.    ..+++++++|||.+. +......... .........+ ..+++++|+|+++
T Consensus       153 ~~-----~y~~sK-~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~  225 (251)
T PRK12826        153 LA-----HYAASK-AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQ-WAEAIAAAIPLGRLGEPEDIAAAV  225 (251)
T ss_pred             cc-----HHHHHH-HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchH-HHHHHHhcCCCCCCcCHHHHHHHH
Confidence            11     222221 12344444432    468999999998443 2211110000 0000000111 1478999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..++..... ..|++|++.++.
T Consensus       226 ~~l~~~~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        226 LFLASDEARYITGQTLPVDGGA  247 (251)
T ss_pred             HHHhCccccCcCCcEEEECCCc
Confidence            988865432 368999998764

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.74  E-value=1.3e-16  Score=186.66  Aligned_cols=243  Identities=15%  Similarity=0.217  Sum_probs=161.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcchHH---HHHHHHhhhhhhhhhhhccceEEEecCCC-----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG----FSVRAGVPELGAAQ---ELARLAASYKILSKEELKRLNAVESNFDS-----   71 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~~~~---~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-----   71 (427)
                      .++|+|||||||+|++|++.|+++|    ++|++++|+.....   .+......+.++......+++++.+|+.+     
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999987    89999999865432   23222223333323334578899999974     


Q ss_pred             -HHHHHHHhcCcCEEEEccCCCCCC-C---CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC------------
Q 044905           72 -AESIAKAIGNAGKVVVTIGPTEDG-P---TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY------------  134 (427)
Q Consensus        72 -~~sl~~al~g~d~Vi~~ag~~~~~-~---~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~------------  134 (427)
                       .+.+..+..++|+|||+++..... +   ....|+.++.+++++|...++++|+|+||.++++....            
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence             466777778999999999876432 1   23468999999999999999999999999987643110            


Q ss_pred             -CCCC--CC---CccchhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC------ccceE-----Eecccc
Q 044905          135 -NVLD--GI---SSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPES------SYNVV-----VSAEAS  196 (427)
Q Consensus       135 -~~~~--~~---~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~------~~~i~-----~~~~~~  196 (427)
                       ...+  ..   .....+.|+.++ +.+|.++....+.|++++++||| .++....+.      ...+.     ......
T Consensus      1131 ~~~~e~~~~~~~~~~~~~~Y~~sK-~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~ 1209 (1389)
T TIGR03443      1131 AGIPESDDLMGSSKGLGTGYGQSK-WVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPN 1209 (1389)
T ss_pred             CCCCcccccccccccCCCChHHHH-HHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCC
Confidence             0000  00   111123466555 66888887766679999999998 333321110      00000     000011


Q ss_pred             cCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          197 VDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       197 ~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      .....++++++|++++++.++.++.. ..+.+||++++.   ..++.+++..+.+
T Consensus      1210 ~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~l~~ 1261 (1389)
T TIGR03443      1210 INNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP---RIRFNDFLGTLKT 1261 (1389)
T ss_pred             CCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC---CCcHHHHHHHHHH
Confidence            12234799999999999988765422 234689998886   4566677766644

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.74  E-value=1.3e-16  Score=152.16  Aligned_cols=213  Identities=17%  Similarity=0.151  Sum_probs=134.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----   79 (427)
                      +++||||||||++|++|++.|+++|++|++++|+......+......       ...++.++.+|+.|.+++..++    
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD-------AGGSVIYLVADVTKEDEIADMIAAAA   73 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35899999999999999999999999999999997655444332111       0235678999999999665544    


Q ss_pred             ---cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           80 ---GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 ---~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         .+.|+|||+++.....+           .+..|+.++..+++++    ++.+++++||+||.+.+.+..     ...
T Consensus        74 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----~~~  148 (255)
T TIGR01963        74 AEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----FKS  148 (255)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----CCc
Confidence               46799999998654321           2346777777777666    567788999998875322211     111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC-CCCCCCcc------ceEEe-----cccccCCCCCccc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE-DFSPESSY------NVVVS-----AEASVDANDYKVA  205 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~-~~~~~~~~------~i~~~-----~~~~~~~~~~~i~  205 (427)
                      .     |...+ .+.+.+.+.+    ...+++++++|||.+. +.......      .+...     ..........+++
T Consensus       149 ~-----y~~sk-~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
T TIGR01963       149 A-----YVAAK-HGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVT  222 (255)
T ss_pred             h-----hHHHH-HHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcC
Confidence            1     21111 1233333332    2458999999998543 21100000      00000     0000111125899


Q ss_pred             HHHHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      ++|+|++++.++.++. ...++.|++.++.
T Consensus       223 ~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~  252 (255)
T TIGR01963       223 VDEVAETALFLASDAAAGITGQAIVLDGGW  252 (255)
T ss_pred             HHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence            9999999999987542 3467889998763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.73  E-value=1.8e-16  Score=149.91  Aligned_cols=215  Identities=19%  Similarity=0.149  Sum_probs=136.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |++++|+||||||++|.+|++.|+++|++|+++.|++.+...+......       ...++.++.+|+.|++++.+++++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   75 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-------AGGEARVLVFDVSDEAAVRALIEA   75 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHH
Confidence            4557899999999999999999999999999999998764433221110       023456888999999988877754


Q ss_pred             -------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           82 -------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        82 -------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             +|+|||++|.....+           .+..|+.+..++++++.    ..++++||++||.+...+.     .+
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~-----~~  150 (246)
T PRK05653         76 AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN-----PG  150 (246)
T ss_pred             HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC-----CC
Confidence                   599999998754322           34567778888877774    5678899999876532111     11


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      ...|     ...+ .+.+.+.+.    +...+++++++|||.+........................+++.+|+|+.+..
T Consensus       151 ~~~y-----~~sk-~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  224 (246)
T PRK05653        151 QTNY-----SAAK-AGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAF  224 (246)
T ss_pred             CcHh-----HhHH-HHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            1222     2111 122333333    33568999999999543321110000000000001111247889999999999


Q ss_pred             HhcCcc-cccCcEEEEecCC
Q 044905          216 VFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~-~~~g~~~nI~~~~  234 (427)
                      ++.... ...+..|++.++.
T Consensus       225 ~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        225 LASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             HcCchhcCccCCEEEeCCCe
Confidence            886422 3468899998874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.73  E-value=3.3e-16  Score=150.11  Aligned_cols=214  Identities=13%  Similarity=0.081  Sum_probs=135.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||++|+++++.|+++|++|+++.|++.....+......       ...++.++.+|++|.+++.+++. 
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   77 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK-------AGGKAIGVAMDVTNEDAVNAGIDK   77 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh-------cCceEEEEECCCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999998655444322111       01245678999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHH----HHHHHHHH-HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSD----AFQVIQAA-QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~----~~~ll~Aa-~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|....++           .+++|+.+    +.++++++ +..+.++||++||.....+.     .
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-----~  152 (262)
T PRK13394         78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-----P  152 (262)
T ss_pred             HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-----C
Confidence                  3899999999754321           34467777    55667777 66778999999876522111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCC-CCCccceEEe-c----------ccccCCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFS-PESSYNVVVS-A----------EASVDANDY  202 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~-~~~~~~i~~~-~----------~~~~~~~~~  202 (427)
                      ....|.     ..+ .+.+.+.+.+    ...+++++++|||++.... .......... +          .........
T Consensus       153 ~~~~y~-----~sk-~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (262)
T PRK13394        153 LKSAYV-----TAK-HGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGV  226 (262)
T ss_pred             CCcccH-----HHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCC
Confidence            111122     111 1233333333    3468999999998554321 1000000000 0          000111125


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++++|+++++..++..+.. ..|..|++.++
T Consensus       227 ~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        227 FTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             CCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            89999999999999875422 34788888776

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.73  E-value=1.2e-16  Score=155.06  Aligned_cols=223  Identities=14%  Similarity=0.049  Sum_probs=141.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |.+++|+||||||++|+++++.|+++|++|++++|+++....+....          ..++.++.+|++|.+++..++. 
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   70 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----------GDRLLPLALDVTDRAAVFAAVET   70 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------cCCeeEEEccCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999987655443221          1234578999999988877654 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.++.++++++    ++.+.+++|++||.+.+.+..     .
T Consensus        71 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----~  145 (275)
T PRK08263         71 AVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----M  145 (275)
T ss_pred             HHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----C
Confidence                  5799999999764422           3568888877777765    566788999998876432211     1


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-Ccc---ceEEecc-----cccCCCCCc-cc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-SSY---NVVVSAE-----ASVDANDYK-VA  205 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~~~---~i~~~~~-----~~~~~~~~~-i~  205 (427)
                      ..     .|+..+ ...+.+.+.+.    ..|++++++|||.+...... ...   .......     ........+ ++
T Consensus       146 ~~-----~Y~~sK-aa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (275)
T PRK08263        146 SG-----IYHASK-WALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGD  219 (275)
T ss_pred             cc-----HHHHHH-HHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCC
Confidence            11     222222 22344444433    47899999999855432110 000   0000000     000011134 78


Q ss_pred             HHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          206 KSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      .+|+|++++.++..+ ...+..++..++.   ..++.++...+.
T Consensus       220 p~dva~~~~~l~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~  259 (275)
T PRK08263        220 PEAAAEALLKLVDAE-NPPLRLFLGSGVL---DLAKADYERRLA  259 (275)
T ss_pred             HHHHHHHHHHHHcCC-CCCeEEEeCchHH---HHHHHHHHHHHH
Confidence            999999999999854 3344544443433   456666666653

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=3.3e-16  Score=151.29  Aligned_cols=208  Identities=15%  Similarity=0.149  Sum_probs=150.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--A   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--~   82 (427)
                      |+|||||++|++|+.|++.|. .+++|++++|..                            .|++|++.+.+.+..  .
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------~Ditd~~~v~~~i~~~~P   51 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------LDITDPDAVLEVIRETRP   51 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------ccccChHHHHHHHHhhCC
Confidence            459999999999999999998 779999998873                            489999999999985  5


Q ss_pred             CEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC-CCCCCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN-VLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~-~~~~~~~~~~~~~~k~~~l  154 (427)
                      |+|||+|+.+.-+.       .+.+|..++.++.++|.+.|. .+||+||-.|+.|.... +.+.-.+-+.+.|++++ +
T Consensus        52 DvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sK-l  129 (281)
T COG1091          52 DVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSK-L  129 (281)
T ss_pred             CEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHH-H
Confidence            99999999776432       566999999999999999998 68999999887776633 43333344457888887 6


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCCC-CCCCCCCCc---cceEEec-----ccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          155 TVPEFLQKVIETDVSYTFIKTSL-TEDFSPESS---YNVVVSA-----EASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG~-~~~~~~~~~---~~i~~~~-----~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      ..|...   ...+-+++|+|.++ +.....++.   ..+...+     ......  ++++..|+|+++..++...  ..+
T Consensus       130 ~GE~~v---~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~g--sPt~~~dlA~~i~~ll~~~--~~~  202 (281)
T COG1091         130 AGEEAV---RAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYG--SPTYTEDLADAILELLEKE--KEG  202 (281)
T ss_pred             HHHHHH---HHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeee--CCccHHHHHHHHHHHHhcc--ccC
Confidence            677544   34677899999862 222111111   1111111     111111  4799999999999988743  345


Q ss_pred             cEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          226 KVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       226 ~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++|++++..   ..+|-|+...|.+..+
T Consensus       203 ~~yH~~~~g---~~Swydfa~~I~~~~~  227 (281)
T COG1091         203 GVYHLVNSG---ECSWYEFAKAIFEEAG  227 (281)
T ss_pred             cEEEEeCCC---cccHHHHHHHHHHHhC
Confidence            699999987   4567777777765433

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.72  E-value=4e-16  Score=148.59  Aligned_cols=219  Identities=15%  Similarity=0.156  Sum_probs=140.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |..++|+||||||+||+++++.|+++|++|++++|+... ...+......       ...++.++.+|++|++++.++++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~   76 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-------AGGRASAVGADLTDEESVAALMD   76 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHH
Confidence            455789999999999999999999999999999997642 2222111000       01245688999999999887765


Q ss_pred             -------CcCEEEEccCCCCC-----CCCccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCCCCccchh
Q 044905           81 -------NAGKVVVTIGPTED-----GPTSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDGISSFFNN  146 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~-----~~~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~  146 (427)
                             ++|+|||++|....     ...+++|+.++.++++++...-  ..++|++||........   ..+.+.+  .
T Consensus        77 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~---~~~~~~~--~  151 (248)
T PRK07806         77 TAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT---VKTMPEY--E  151 (248)
T ss_pred             HHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc---ccCCccc--c
Confidence                   58999999986422     1256789999999999998642  35899998854211111   0111111  1


Q ss_pred             hhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecc--cccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          147 LFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAE--ASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~--~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      .|+.+| .+.|.+++.+.    ..++++++++||.+..........-...+.  ........+++++|+|++++.+++..
T Consensus       152 ~Y~~sK-~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  230 (248)
T PRK07806        152 PVARSK-RAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAP  230 (248)
T ss_pred             HHHHHH-HHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcc
Confidence            233333 44677666654    468999999998554321100000000000  00000114889999999999999743


Q ss_pred             ccccCcEEEEecCC
Q 044905          221 AVAENKVVKVFTDP  234 (427)
Q Consensus       221 ~~~~g~~~nI~~~~  234 (427)
                       ...|.+|++.+++
T Consensus       231 -~~~g~~~~i~~~~  243 (248)
T PRK07806        231 -VPSGHIEYVGGAD  243 (248)
T ss_pred             -ccCccEEEecCcc
Confidence             4578999999885

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.72  E-value=6.8e-16  Score=149.63  Aligned_cols=231  Identities=14%  Similarity=0.134  Sum_probs=148.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |+.++|+||||+|+||++|++.|+++|++|+++.|+......+.......     ....++.++.+|+.|.+++.++++ 
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEAL-----KGAGAVRYEPADVTDEDQVARAVDA   79 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-----cCCCceEEEEcCCCCHHHHHHHHHH
Confidence            45689999999999999999999999999999999876544432211100     001355688999999998887775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|.... ++           .+++|+.+..++++++..    .+..+|+++||...+...     .
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~  154 (276)
T PRK05875         80 ATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH-----R  154 (276)
T ss_pred             HHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----C
Confidence                  68999999985421 11           345677788888876654    344589999887642111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc--eEEe--cccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN--VVVS--AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~--i~~~--~~~~~~~~~~~i~v~DVA  210 (427)
                      +..     .|+..+ .+.+.+.+.+.    ..+++++++|||++..........  ....  ....+..  .+++++|+|
T Consensus       155 ~~~-----~Y~~sK-~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva  226 (276)
T PRK05875        155 WFG-----AYGVTK-SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLP--RVGEVEDVA  226 (276)
T ss_pred             CCc-----chHHHH-HHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCC--CCcCHHHHH
Confidence            112     222222 23555555443    467999999999654321111000  0000  0011111  367899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCCCC-ChhhHHHHHHHHHh
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDPSA-PARRVDELFSAIAE  250 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~~~-~~~s~~ell~~i~~  250 (427)
                      +++..+++++.. ..+.++++.++... ...++.+++..+..
T Consensus       227 ~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~  268 (276)
T PRK05875        227 NLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFG  268 (276)
T ss_pred             HHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhh
Confidence            999999986533 35889999888643 22477888877754

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.71  E-value=1e-15  Score=148.86  Aligned_cols=197  Identities=15%  Similarity=0.171  Sum_probs=129.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ++++|+||||+|+||++|++.|+++|++|++++|++++...+....          ..++..+.+|++|.+++..+++  
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH----------PDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhc----------CCCeeEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987655543321          2345688999999999887775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|....++           .+++|+.++.++++++    +..+.++||++||.+...+.     .+.
T Consensus        73 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----~~~  147 (277)
T PRK06180         73 EATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----PGI  147 (277)
T ss_pred             HHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----CCc
Confidence                 5799999999754322           3568888999998885    34567799999987632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCC-CCCCCccc--eEEec------c----cccCCCCCc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTED-FSPESSYN--VVVSA------E----ASVDANDYK  203 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~-~~~~~~~~--i~~~~------~----~~~~~~~~~  203 (427)
                      .     .|+..+ ...+.+.+.+.    ..|++++++|||.+.. +.......  .....      .    .....+..+
T Consensus       148 ~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (277)
T PRK06180        148 G-----YYCGSK-FALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQP  221 (277)
T ss_pred             c-----hhHHHH-HHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCC
Confidence            2     222222 22444444433    4689999999985432 21100000  00000      0    001122246


Q ss_pred             ccHHHHHHHHHHHhcCc
Q 044905          204 VAKSQIASLVADVFSNT  220 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~  220 (427)
                      .+.+|+|++++.++..+
T Consensus       222 ~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        222 GDPAKAAQAILAAVESD  238 (277)
T ss_pred             CCHHHHHHHHHHHHcCC
Confidence            78999999999998754

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.71  E-value=3.9e-16  Score=166.32  Aligned_cols=245  Identities=10%  Similarity=0.103  Sum_probs=153.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchH---HHHHHHHhhhhhhhh------h-----hhccceEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAA---QELARLAASYKILSK------E-----ELKRLNAV   65 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~---~~l~~~~~~~~~~~~------~-----~~~rl~vv   65 (427)
                      ..++|||||||||+|.+|++.||+.+.   +|++++|.....   +.+........+++.      .     ...++.++
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            357999999999999999999998763   789999976532   222111111111110      0     13578899


Q ss_pred             EecCCCH------HHHHHHhcCcCEEEEccCCCCCCC----CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccC
Q 044905           66 ESNFDSA------ESIAKAIGNAGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        66 ~gDl~D~------~sl~~al~g~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~  134 (427)
                      .||++++      +.+..+.+++|+|||+|+....+.    ..++|+.++.+++++|+.. ++++||++||..+|+....
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G  277 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG  277 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence            9999986      455666678999999999765332    4678999999999999887 4789999999988765421


Q ss_pred             CCCC-CCC----------------------------------------------------------ccchhhhhcccccc
Q 044905          135 NVLD-GIS----------------------------------------------------------SFFNNLFSRNQPLT  155 (427)
Q Consensus       135 ~~~~-~~~----------------------------------------------------------~~~~~~~~k~~~l~  155 (427)
                      ...+ .++                                                          ..+.|.|.-.+ ..
T Consensus       278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK-~l  356 (605)
T PLN02503        278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTK-AM  356 (605)
T ss_pred             eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHH-HH
Confidence            1000 000                                                          00113333332 23


Q ss_pred             HHHHHHHHhcCCCeEEEEeCCCC----CCCCCCCccce-------EEecc-------cccCCCCCcccHHHHHHHHHHHh
Q 044905          156 VPEFLQKVIETDVSYTFIKTSLT----EDFSPESSYNV-------VVSAE-------ASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       156 ~E~~l~~l~~~gl~~tilRPG~~----~~~~~~~~~~i-------~~~~~-------~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      +|.++... ..+++++|+||+.+    .+..++|..+.       ...+.       .......+.|+++.|+++++.+.
T Consensus       357 AE~lV~~~-~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~  435 (605)
T PLN02503        357 GEMVINSM-RGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAM  435 (605)
T ss_pred             HHHHHHHh-cCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHH
Confidence            66666542 35799999998632    11222222221       11111       11222336899999999988773


Q ss_pred             cC-cc--cccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          218 SN-TA--VAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       218 ~~-~~--~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      .. ..  ...+.+||++++... +.+|.+++..+.+
T Consensus       436 a~~~~~~~~~~~vYn~ts~~~n-P~t~~~~~~~~~~  470 (605)
T PLN02503        436 AKHGGAAKPEINVYQIASSVVN-PLVFQDLARLLYE  470 (605)
T ss_pred             HhhhcccCCCCCEEEeCCCCCC-CeEHHHHHHHHHH
Confidence            21 11  124789999988333 4667777776643

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.71  E-value=3.1e-16  Score=151.09  Aligned_cols=218  Identities=19%  Similarity=0.201  Sum_probs=150.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+||||||++|++++++|+++|++|++++|++.++..+. .++             +++.+|+.|+.++..++.|++.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v-------------~~~~~d~~~~~~l~~a~~G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGV-------------EVVLGDLRDPKSLVAGAKGVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCc-------------EEEEeccCCHhHHHHHhccccE
Confidence            58999999999999999999999999999999998877665 333             5999999999999999999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      ++++.+... +.. .........++.+++.+  ++++++++|+...  ...     ...     .+.+.    ....+..
T Consensus        67 ~~~i~~~~~-~~~-~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~--~~~-----~~~-----~~~~~----~~~~e~~  128 (275)
T COG0702          67 VLLISGLLD-GSD-AFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGA--DAA-----SPS-----ALARA----KAAVEAA  128 (275)
T ss_pred             EEEEecccc-ccc-chhHHHHHHHHHHHHHhcCCceEEEEeccCCC--CCC-----Ccc-----HHHHH----HHHHHHH
Confidence            999888654 221 11111334455555554  4888887775542  110     001     11111    2233355


Q ss_pred             HhcCCCeEEEEeC-CCCCCCCCCCccceEEecc--cccC-CCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCCh
Q 044905          163 VIETDVSYTFIKT-SLTEDFSPESSYNVVVSAE--ASVD-ANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPA  238 (427)
Q Consensus       163 l~~~gl~~tilRP-G~~~~~~~~~~~~i~~~~~--~~~~-~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~  238 (427)
                      +..+|++|+++|| +++.++...........+.  .... ...+++..+|++.++...+..+. ..+++|.++++.   .
T Consensus       129 l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~-~~~~~~~l~g~~---~  204 (275)
T COG0702         129 LRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA-TAGRTYELAGPE---A  204 (275)
T ss_pred             HHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc-ccCcEEEccCCc---e
Confidence            5579999999996 4655543221000000000  0111 13468999999999999998664 678999999997   7


Q ss_pred             hhHHHHHHHHHhccchhhhH
Q 044905          239 RRVDELFSAIAEDGRRAAYA  258 (427)
Q Consensus       239 ~s~~ell~~i~~~~~~~~~~  258 (427)
                      .++.++.+.+....+++...
T Consensus       205 ~~~~~~~~~l~~~~gr~~~~  224 (275)
T COG0702         205 LTLAELASGLDYTIGRPVGL  224 (275)
T ss_pred             ecHHHHHHHHHHHhCCccee
Confidence            88899999998876666555

>PRK06182 short chain dehydrogenase; Validated

Probab=99.71  E-value=9e-16  Score=148.75  Aligned_cols=206  Identities=15%  Similarity=0.156  Sum_probs=130.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |.+++|+||||||+||++++++|+++|++|++++|+.+++..+...             ++.++.+|++|.+++.++++ 
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~   67 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL-------------GVHPLSLDVTDEASIKAAVDT   67 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC-------------CCeEEEeeCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999998765554322             24589999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHH----HHHHHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDA----FQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~----~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.+.    ..++..+++.+.+++|++||.+....  .    +
T Consensus        68 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~--~----~  141 (273)
T PRK06182         68 IIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIY--T----P  141 (273)
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCC--C----C
Confidence                  7899999999764432           345666664    44555667778889999987652111  0    1


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-ceEEeccc---------------ccCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-NVVVSAEA---------------SVDA  199 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-~i~~~~~~---------------~~~~  199 (427)
                      ..    ..|...+ .+.+.+.+.+    ...|+++++++||++......... .+......               ....
T Consensus       142 ~~----~~Y~~sK-aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (273)
T PRK06182        142 LG----AWYHATK-FALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYG  216 (273)
T ss_pred             Cc----cHhHHHH-HHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhc
Confidence            11    1222222 2244443333    356899999999955432110000 00000000               0000


Q ss_pred             CCCcccHHHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          200 NDYKVAKSQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      ...+.+.+|||++++.++...  .....|.++.+
T Consensus       217 ~~~~~~~~~vA~~i~~~~~~~--~~~~~~~~g~~  248 (273)
T PRK06182        217 SGRLSDPSVIADAISKAVTAR--RPKTRYAVGFG  248 (273)
T ss_pred             cccCCCHHHHHHHHHHHHhCC--CCCceeecCcc
Confidence            113569999999999998742  12345555444

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.71  E-value=6.7e-16  Score=149.96  Aligned_cols=215  Identities=15%  Similarity=0.154  Sum_probs=135.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH---H
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK---A   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~---a   78 (427)
                      |.+++|+||||||++|++|++.|+++|++|++++|+++....+.......     ....++.++.+|++|++++..   +
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~d~~~~~~~~~~   75 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL-----NLQQNIKVQQLDVTDQNSIHNFQLV   75 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-----CCCCceeEEecCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999987655543321110     001356789999999988765   1


Q ss_pred             ---hcCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           79 ---IGNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        79 ---l~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                         +.++|+|||++|....+.           .+.+|+.++.++++++    ++.+.++||++||.+...+..     +.
T Consensus        76 ~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----~~  150 (280)
T PRK06914         76 LKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP-----GL  150 (280)
T ss_pred             HHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC-----CC
Confidence               235799999998654322           2457777877777774    566788999998765322211     11


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc---eEEecccc------------cCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN---VVVSAEAS------------VDAND  201 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~---i~~~~~~~------------~~~~~  201 (427)
                      .     .|+..+ ...+.+.+.+.    ..|++++++|||.++.........   ........            .....
T Consensus       151 ~-----~Y~~sK-~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (280)
T PRK06914        151 S-----PYVSSK-YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSD  224 (280)
T ss_pred             c-----hhHHhH-HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhh
Confidence            1     222222 23445555443    568999999998554321110000   00000000            00111


Q ss_pred             CcccHHHHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      .+++.+|+|++++.+++++.  ....|+++++.
T Consensus       225 ~~~~~~dva~~~~~~~~~~~--~~~~~~~~~~~  255 (280)
T PRK06914        225 TFGNPIDVANLIVEIAESKR--PKLRYPIGKGV  255 (280)
T ss_pred             ccCCHHHHHHHHHHHHcCCC--CCcccccCCch
Confidence            36899999999999998653  23567887664

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.70  E-value=6.2e-16  Score=148.21  Aligned_cols=222  Identities=17%  Similarity=0.145  Sum_probs=143.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||||+||++|++.|+++|++|++++|++.....+.....         ..++.++.+|+.|.+++..++.   
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~   72 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---------DARFVPVACDLTDAASLAAALANAA   72 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------CCceEEEEecCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999876554432211         1245689999999999887775   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|+|||++|.....+           ...+|+.+..++++++    .+.+.++||++||.....  .+    +.+
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~----~~~  146 (257)
T PRK07074         73 AERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA--AL----GHP  146 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC--CC----CCc
Confidence                4799999998654321           2346777777777777    345677899998764211  11    111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc--eEEeccc-ccCCCCCcccHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN--VVVSAEA-SVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~--i~~~~~~-~~~~~~~~i~v~DVA~~v~  214 (427)
                      .|     ...+ .+.+.+.+.+.    ..|+++..++||++..........  ....... .......+++++|+++++.
T Consensus       147 ~y-----~~sK-~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~  220 (257)
T PRK07074        147 AY-----SAAK-AGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVL  220 (257)
T ss_pred             cc-----HHHH-HHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            22     2221 22344444433    458999999999554321100000  0000000 0011125899999999999


Q ss_pred             HHhcCc-ccccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          215 DVFSNT-AVAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       215 ~al~~~-~~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      .++++. ....|..+++.++.   ...+.++++.++
T Consensus       221 ~l~~~~~~~~~g~~~~~~~g~---~~~~~~~~~~~~  253 (257)
T PRK07074        221 FLASPAARAITGVCLPVDGGL---TAGNREMARTLT  253 (257)
T ss_pred             HHcCchhcCcCCcEEEeCCCc---CcCChhhhhhhc
Confidence            998643 23357888888887   555677777764

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.70  E-value=1.2e-15  Score=145.45  Aligned_cols=214  Identities=14%  Similarity=0.127  Sum_probs=137.0

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEE-EecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRA-GVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~a-l~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +|..++|+||||||+||+++++.|+++|++|++ ..|+..+.+.+......       ...++.++.+|++|++++.+++
T Consensus         1 ~~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   73 (250)
T PRK08063          1 VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA-------LGRKALAVKANVGDVEKIKEMF   73 (250)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHH
Confidence            467789999999999999999999999999876 46776554433221110       0234568899999999888877


Q ss_pred             c-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCC
Q 044905           80 G-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                      +       ++|+|||++|.....+           .+.+|+.++.++++++..    .+.++||++||.+....     .
T Consensus        74 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~  148 (250)
T PRK08063         74 AQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-----L  148 (250)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC-----C
Confidence            6       4799999998654332           245777788888877764    45679999988652111     1


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc---ceEEe-cccccCCCCCcccHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY---NVVVS-AEASVDANDYKVAKSQI  209 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~---~i~~~-~~~~~~~~~~~i~v~DV  209 (427)
                      .+...     |+..+ .+.+.+.+.+.    ..|++++.++||++.........   .+... .......  .+++.+|+
T Consensus       149 ~~~~~-----y~~sK-~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv  220 (250)
T PRK08063        149 ENYTT-----VGVSK-AALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAG--RMVEPEDV  220 (250)
T ss_pred             CCccH-----HHHHH-HHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCC--CCcCHHHH
Confidence            11122     22222 23455554433    46899999999965432110000   00000 0001111  37899999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.++.++.. ..|..+++.++.
T Consensus       221 a~~~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        221 ANAVLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             HHHHHHHcCchhcCccCCEEEECCCe
Confidence            9999999875432 357888887764

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.70  E-value=1.8e-15  Score=142.50  Aligned_cols=204  Identities=16%  Similarity=0.156  Sum_probs=134.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++|+||||||+||+++++.|+++|++|++++|++.+..+......         ..+..++.+|+.|.+++..+++  
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~   76 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVP---------ADALRIGGIDLVDPQAARRAVDEV   76 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHh---------hcCceEEEeecCCHHHHHHHHHHH
Confidence            45799999999999999999999999999999998865433222111         1234578899999988877765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|......           .+.+|..++.++++++.    ..++++||++||.+.+...     .+.
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~  151 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----PGM  151 (239)
T ss_pred             HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----CCc
Confidence                 5899999998643211           24467777888877764    4578899999987643221     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      ..|     ...+ ...+.+++.+    ...++++.++|||.+......  ...    .....  ..+++.+|+|+++..+
T Consensus       152 ~~y-----~~sk-~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~--~~~----~~~~~--~~~~~~~dva~~~~~~  217 (239)
T PRK12828        152 GAY-----AAAK-AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNR--ADM----PDADF--SRWVTPEQIAAVIAFL  217 (239)
T ss_pred             chh-----HHHH-HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchh--hcC----Cchhh--hcCCCHHHHHHHHHHH
Confidence            222     1111 1233333332    346899999999955432110  000    01111  1378999999999999


Q ss_pred             hcCcc-cccCcEEEEecCC
Q 044905          217 FSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       217 l~~~~-~~~g~~~nI~~~~  234 (427)
                      +.+.. ...|..+.+.++.
T Consensus       218 l~~~~~~~~g~~~~~~g~~  236 (239)
T PRK12828        218 LSDEAQAITGASIPVDGGV  236 (239)
T ss_pred             hCcccccccceEEEecCCE
Confidence            87542 2357888887764

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.70  E-value=3.1e-16  Score=155.06  Aligned_cols=173  Identities=12%  Similarity=0.152  Sum_probs=131.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcch---HHHHHHHHhhhhhhhhhhhccceEEEecCC------CHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGA---AQELARLAASYKILSKEELKRLNAVESNFD------SAES   74 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~---~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~------D~~s   74 (427)
                      ++||+||||||+|++|+.+||.+- .+|++++|-.+.   ...|......|.+++....+|++++.||+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            589999999999999999999875 699999998873   344544444566666666789999999998      3567


Q ss_pred             HHHHhcCcCEEEEccCCCCC----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-C---------
Q 044905           75 IAKAIGNAGKVVVTIGPTED----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-I---------  140 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~---------  140 (427)
                      +....+.+|.|||+++-...    ......|+.|+..+++.|.....|.+.||||.+++....+..... +         
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~  160 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV  160 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence            77777889999999986542    235678999999999999988899999999999854433211110 0         


Q ss_pred             CccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLT  178 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~  178 (427)
                      .....+.|+++| +.+|.+++...+.|++++|+|||++
T Consensus       161 ~~~~~~GY~~SK-wvaE~Lvr~A~~rGLpv~I~Rpg~I  197 (382)
T COG3320         161 GQGLAGGYGRSK-WVAEKLVREAGDRGLPVTIFRPGYI  197 (382)
T ss_pred             cCccCCCcchhH-HHHHHHHHHHhhcCCCeEEEecCee
Confidence            111125667766 7788888887788999999999843

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.69  E-value=3e-15  Score=141.50  Aligned_cols=202  Identities=17%  Similarity=0.261  Sum_probs=133.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||++|++++++|+++|++|++++|++.+...+......        ..++.++.+|+.|.+++..++.  
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~--------~~~~~~~~~D~~~~~~~~~~~~~~   76 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN--------KGNVLGLAADVRDEADVQRAVDAI   76 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc--------cCcEEEEEccCCCHHHHHHHHHHH
Confidence            347899999999999999999999999999999998765544332111        1345689999999998887765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|+|||++|....++           .+++|+.+..++++++..   .+.+++|++||......     ..+..
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----~~~~~  151 (237)
T PRK07326         77 VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF-----FAGGA  151 (237)
T ss_pred             HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC-----CCCCc
Confidence                 6899999998654321           355677778888877754   35678998887652111     11111


Q ss_pred             ccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCC-CCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLT-EDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~-~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      .|     ...+ .+.+.+.+.    +...|++++++|||.+ .++.. .   .  ...    .....++.+|+++.++.+
T Consensus       152 ~y-----~~sk-~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~-~---~--~~~----~~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        152 AY-----NASK-FGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNG-H---T--PSE----KDAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             hH-----HHHH-HHHHHHHHHHHHHhcccCcEEEEEeeccccCcccc-c---c--cch----hhhccCCHHHHHHHHHHH
Confidence            12     2111 112333333    3457999999999954 33221 0   0  000    011247899999999999


Q ss_pred             hcCcccccCcEEEEecC
Q 044905          217 FSNTAVAENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~  233 (427)
                      +..+.......+.+..+
T Consensus       216 l~~~~~~~~~~~~~~~~  232 (237)
T PRK07326        216 LKMPPRTLPSKIEVRPS  232 (237)
T ss_pred             HhCCccccccceEEecC
Confidence            98776666777777544

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.69  E-value=2e-15  Score=141.39  Aligned_cols=202  Identities=20%  Similarity=0.247  Sum_probs=129.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |++++|+||||||++|+++++.|+++ ++|++++|+.+....+....           ..+.++.+|++|.+++.+++. 
T Consensus         1 ~~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~   68 (227)
T PRK08219          1 MERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----------PGATPFPVDLTDPEAIAAAVEQ   68 (227)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----------ccceEEecCCCCHHHHHHHHHh
Confidence            55789999999999999999999999 99999999976554443211           134589999999999998887 


Q ss_pred             --CcCEEEEccCCCCCCC-----------CccccHHH----HHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCcc
Q 044905           81 --NAGKVVVTIGPTEDGP-----------TSEVSTSD----AFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~~-----------~~~vn~~~----~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                        ++|+|||++|.....+           ....|+.+    +.++++++++. .+++|++||+..+.+.     .+...|
T Consensus        69 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~-----~~~~~y  142 (227)
T PRK08219         69 LGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRAN-----PGWGSY  142 (227)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcC-----CCCchH
Confidence              5899999998754321           23455555    34445555544 4689999877632211     111222


Q ss_pred             chhhhhccccccHHHHHHHHh--cCC-CeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI--ETD-VSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~--~~g-l~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                           ...+ ...+.+.+.+.  ..+ +++..++||.+.....   ..+.. .......+..+++++|+|++++.+++++
T Consensus       143 -----~~~K-~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~---~~~~~-~~~~~~~~~~~~~~~dva~~~~~~l~~~  212 (227)
T PRK08219        143 -----AASK-FALRALADALREEEPGNVRVTSVHPGRTDTDMQ---RGLVA-QEGGEYDPERYLRPETVAKAVRFAVDAP  212 (227)
T ss_pred             -----HHHH-HHHHHHHHHHHHHhcCCceEEEEecCCccchHh---hhhhh-hhccccCCCCCCCHHHHHHHHHHHHcCC
Confidence                 2211 22455555443  234 9999999986543211   11111 1111112225799999999999999764


Q ss_pred             ccccCcEEEEecC
Q 044905          221 AVAENKVVKVFTD  233 (427)
Q Consensus       221 ~~~~g~~~nI~~~  233 (427)
                      .  .+.++++.-.
T Consensus       213 ~--~~~~~~~~~~  223 (227)
T PRK08219        213 P--DAHITEVVVR  223 (227)
T ss_pred             C--CCccceEEEe
Confidence            2  4667776544

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.69  E-value=1.8e-15  Score=144.59  Aligned_cols=211  Identities=19%  Similarity=0.159  Sum_probs=133.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||||+||+++++.|+++|++|+++ .|+......+......       ...++.++.+|++|.+++.++++ 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~i~~~~~~   77 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES-------NGGKAFLIEADLNSIDGVKKLVEQ   77 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCcEEEEEcCcCCHHHHHHHHHH
Confidence            34799999999999999999999999999875 5765443333221110       01245689999999999888776 


Q ss_pred             ------------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           81 ------------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 ------------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                                  ++|++||++|....+.           ..++|+.++.++++++...  ..+++|++||...+.+.   
T Consensus        78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~---  154 (254)
T PRK12746         78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF---  154 (254)
T ss_pred             HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC---
Confidence                        5899999998754322           3457888999999888763  34589999877643211   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc--cc-e-EEecccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS--YN-V-VVSAEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~--~~-i-~~~~~~~~~~~~~~i~v~  207 (427)
                        .+..     .|+..+ .+.+.+.+.+    ...++++++++||++........  .. + ..........  .+++.+
T Consensus       155 --~~~~-----~Y~~sK-~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  224 (254)
T PRK12746        155 --TGSI-----AYGLSK-GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFG--RIGQVE  224 (254)
T ss_pred             --CCCc-----chHhhH-HHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcC--CCCCHH
Confidence              1111     222222 2234443333    24689999999996543211000  00 0 0000111111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |||+++..++.+... ..|..|++.++
T Consensus       225 dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        225 DIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             HHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            999999888875422 35788998765

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.68  E-value=2.7e-15  Score=142.75  Aligned_cols=211  Identities=15%  Similarity=0.146  Sum_probs=137.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .+++|+||||||+||+++++.|+++|++|++++|+......+......       ...++.++.+|++|.+++.+++.  
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~   74 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA-------KGGNAQAFACDITDRDSVDTAVAAA   74 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999988665544322111       02356789999999998888765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.+..++++++.    +.+.+++|++||.+.+.+..     ..
T Consensus        75 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-----~~  149 (250)
T TIGR03206        75 EQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-----GE  149 (250)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----CC
Confidence                 5899999998643211           35678888888877765    56778999999876433211     11


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEec--------ccccCCCCCcccHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSA--------EASVDANDYKVAKSQ  208 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~--------~~~~~~~~~~i~v~D  208 (427)
                      ..     |+..+ .+.+.+.+.+.    ..++++++++||.+.+.............        ...+..  .+...+|
T Consensus       150 ~~-----Y~~sK-~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d  221 (250)
T TIGR03206       150 AV-----YAACK-GGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLG--RLGQPDD  221 (250)
T ss_pred             ch-----HHHHH-HHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCcc--CCcCHHH
Confidence            22     22211 12334444332    45899999999955432110000000000        000111  2568899


Q ss_pred             HHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          209 IASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      +|+++..++.... ...|..+.+.++
T Consensus       222 va~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       222 LPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             HHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            9999999886532 235788888765

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.68  E-value=3.8e-15  Score=140.92  Aligned_cols=215  Identities=19%  Similarity=0.169  Sum_probs=133.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||||++|++|++.|+++|++|+++.|+... ...+......       ...++.++.+|+.|.+++.++++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~   75 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-------LGGKALAVQGDVSDAESVERAVD   75 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHH
Confidence            445799999999999999999999999999888887653 2222211100       12355688999999998887765


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|+|||++|.....+           .+.+|+.+..++++++..    .+.++||++||.+...+..     
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~-----  150 (248)
T PRK05557         76 EAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP-----  150 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC-----
Confidence                   5799999998754322           244677788888877764    3567899998764221111     


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ....|     ...+ .+.+.+.+.    +...++++++++||.++.......................+.+.+|+|+++.
T Consensus       151 ~~~~y-----~~sk-~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  224 (248)
T PRK05557        151 GQANY-----AASK-AGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVA  224 (248)
T ss_pred             CCchh-----HHHH-HHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            11112     2111 123333333    2356899999999965432111000000000000001113679999999998


Q ss_pred             HHhcCcc-cccCcEEEEecCC
Q 044905          215 DVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~-~~~g~~~nI~~~~  234 (427)
                      .++.... ...++.|+|.++.
T Consensus       225 ~l~~~~~~~~~g~~~~i~~~~  245 (248)
T PRK05557        225 FLASDEAAYITGQTLHVNGGM  245 (248)
T ss_pred             HHcCcccCCccccEEEecCCc
Confidence            8876422 2367889998763

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3e-15  Score=142.55  Aligned_cols=212  Identities=14%  Similarity=0.101  Sum_probs=137.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||||++|++++++|+++|++|+++.|+......+......       ...++.++.+|++|.+++..++. 
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   76 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-------DGGTAIAVQVDVSDPDSAKAMADA   76 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999987654444322110       01244578999999998877664 


Q ss_pred             ------CcCEEEEccCCCCC---CC-----------CccccHHHHHHHHHHHHHc----CCCeEEEEecccccccccCCC
Q 044905           81 ------NAGKVVVTIGPTED---GP-----------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~---~~-----------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v~~~~~~~~  136 (427)
                            .+|+|||++|....   .+           .+++|+.++.++++++...    +.++||++||.+.+..     
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  151 (250)
T PRK07774         77 TVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-----  151 (250)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-----
Confidence                  57999999996431   11           3568888999988887653    4579999998764321     


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-CccceEEecccccCCCCCcccHHHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-SSYNVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~~~~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                         .+     .|+.++ .+.+.+.+.+.    ..++++++++||.+...... ..................+.+.+|+|+
T Consensus       152 ---~~-----~Y~~sK-~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  222 (250)
T PRK07774        152 ---SN-----FYGLAK-VGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVG  222 (250)
T ss_pred             ---cc-----ccHHHH-HHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               12     222222 23455544443    45899999999965432211 000000000000000112568999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+..++..... ..|++|++.++.
T Consensus       223 ~~~~~~~~~~~~~~g~~~~v~~g~  246 (250)
T PRK07774        223 MCLFLLSDEASWITGQIFNVDGGQ  246 (250)
T ss_pred             HHHHHhChhhhCcCCCEEEECCCe
Confidence            99988875322 367899998875

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.7e-15  Score=144.82  Aligned_cols=211  Identities=17%  Similarity=0.157  Sum_probs=134.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +++++++||||+|+||+++++.|+++|++|+++.|+......+......       ...++.++.+|++|.+++.++++ 
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   80 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA-------DGGEAVAFPLDVTDPDSVKSFVAQ   80 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHHH
Confidence            3557899999999999999999999999999999987654433221110       01245678999999999887775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|......           .+.+|+.++.++++++.    ..+..+||++||...+...     ..
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~-----~~  155 (274)
T PRK07775         81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR-----PH  155 (274)
T ss_pred             HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-----CC
Confidence                  5799999998654321           23678888888887764    3456789999887643211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEEe--c---ccccCCCCCcccHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVVS--A---EASVDANDYKVAKSQI  209 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~~--~---~~~~~~~~~~i~v~DV  209 (427)
                      ..     .|+..+ .+.+.+.+.+.    ..|++++++|||.+........ ......  .   .........+++++|+
T Consensus       156 ~~-----~Y~~sK-~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (274)
T PRK07775        156 MG-----AYGAAK-AGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDL  229 (274)
T ss_pred             cc-----hHHHHH-HHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHH
Confidence            11     222222 23555555543    3589999999985432211000 000000  0   0001111248999999


Q ss_pred             HHHHHHHhcCcccccCcEEEEec
Q 044905          210 ASLVADVFSNTAVAENKVVKVFT  232 (427)
Q Consensus       210 A~~v~~al~~~~~~~g~~~nI~~  232 (427)
                      |++++.+++++.  .+.++|+.-
T Consensus       230 a~a~~~~~~~~~--~~~~~~~~~  250 (274)
T PRK07775        230 ARAITFVAETPR--GAHVVNMEV  250 (274)
T ss_pred             HHHHHHHhcCCC--CCCeeEEee
Confidence            999999987642  355677653

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.68  E-value=2.7e-15  Score=142.72  Aligned_cols=213  Identities=17%  Similarity=0.119  Sum_probs=133.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||||++|.+|++.|+++|++|++++|++.+...+......        ..++.++.+|+.|++++..+++ 
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~   74 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--------GGRAIAVAADVSDEADVEAAVAA   74 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------CCeEEEEECCCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999998765444321100        1235689999999999988775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|.... .+           .+.+|+.++.++++.+.    +.+.++||++||.+.+...     .
T Consensus        75 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~  149 (251)
T PRK07231         75 ALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPR-----P  149 (251)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCC-----C
Confidence                  46999999986432 11           34566666666665554    4677899999887643211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEE-ec---ccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVV-SA---EASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~-~~---~~~~~~~~~~i~v~DVA  210 (427)
                      +...|     ...+ ...+.+.+.    +...+++++.++||++............. ..   .........+++++|+|
T Consensus       150 ~~~~y-----~~sk-~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  223 (251)
T PRK07231        150 GLGWY-----NASK-GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIA  223 (251)
T ss_pred             CchHH-----HHHH-HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHH
Confidence            11222     2111 123333333    23458999999999664322111000000 00   00001112478999999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+++.++..... ..|..+.+.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        224 NAALFLASDEASWITGVTLVVDGG  247 (251)
T ss_pred             HHHHHHhCccccCCCCCeEEECCC
Confidence            999998865432 24666677654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.67  E-value=5.8e-15  Score=138.55  Aligned_cols=197  Identities=17%  Similarity=0.159  Sum_probs=135.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +.+.++|||||+.||.++++.|.++|++|++..|+.+++++|......         ..+..+..|++|.+++..++   
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---------~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---------GAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---------CceEEEeeccCCHHHHHHHHHHH
Confidence            346799999999999999999999999999999999888877654331         13347889999998865554   


Q ss_pred             ----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           80 ----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          ..+|++||+||....++           +.++|+.|.+++.++..    +.+..|||.+||.+  +...+   .+-
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiA--G~~~y---~~~  150 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIA--GRYPY---PGG  150 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEecccc--ccccC---CCC
Confidence                46899999999877644           77888888888877664    45566999998776  11111   111


Q ss_pred             CccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCC-CCCCCccceEEecc----cccCCCCCcccHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTED-FSPESSYNVVVSAE----ASVDANDYKVAKSQIAS  211 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~-~~~~~~~~i~~~~~----~~~~~~~~~i~v~DVA~  211 (427)
                      +.|..     .| .+...+-..    +..+++++|.+-||.... .++    .+...+.    .....+...++.+|||+
T Consensus       151 ~vY~A-----TK-~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s----~v~~~g~~~~~~~~y~~~~~l~p~dIA~  220 (246)
T COG4221         151 AVYGA-----TK-AAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFS----TVRFEGDDERADKVYKGGTALTPEDIAE  220 (246)
T ss_pred             ccchh-----hH-HHHHHHHHHHHHHhcCCCeeEEEecCceecceecc----cccCCchhhhHHHHhccCCCCCHHHHHH
Confidence            22222     22 123333333    335789999999996532 211    1222211    11122346899999999


Q ss_pred             HHHHHhcCcccc
Q 044905          212 LVADVFSNTAVA  223 (427)
Q Consensus       212 ~v~~al~~~~~~  223 (427)
                      .++++++.|...
T Consensus       221 ~V~~~~~~P~~v  232 (246)
T COG4221         221 AVLFAATQPQHV  232 (246)
T ss_pred             HHHHHHhCCCcc
Confidence            999999987543

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.67  E-value=2.9e-15  Score=143.70  Aligned_cols=213  Identities=14%  Similarity=0.128  Sum_probs=133.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||+|++|+++++.|+++|++|+++.|+.+..+.+......         .++.++.+|+.|++++..+++ 
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---------AKVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---------CceEEEEccCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999987655544332211         144689999999998887764 


Q ss_pred             ------CcCEEEEccCCC-CCCC-----------CccccHHHHHHHHHHHH----HcCC-CeEEEEecccccccccCCCC
Q 044905           81 ------NAGKVVVTIGPT-EDGP-----------TSEVSTSDAFQVIQAAQ----LAGV-GHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 ------g~d~Vi~~ag~~-~~~~-----------~~~vn~~~~~~ll~Aa~----~~gV-k~~V~vSSs~v~~~~~~~~~  137 (427)
                            ++|+|||++|.. ..+.           .++.|+.++.++++++.    ..+. ++|+++||.+...+     .
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~-----~  154 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG-----Y  154 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC-----C
Confidence                  689999999976 2111           35677778888887763    3445 56776665442111     0


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCC-CCCCCcc------ceEEec----ccccCCCCC
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTED-FSPESSY------NVVVSA----EASVDANDY  202 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~-~~~~~~~------~i~~~~----~~~~~~~~~  202 (427)
                      .+...     |+..+ ...+.++..+.    ..+++++++|||.+.. .......      ......    .........
T Consensus       155 ~~~~~-----y~~~K-~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (264)
T PRK12829        155 PGRTP-----YAASK-WAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGR  228 (264)
T ss_pred             CCCch-----hHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCC
Confidence            11111     22111 12444444443    4689999999985432 1110000      000000    000011114


Q ss_pred             cccHHHHHHHHHHHhcCc-ccccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNT-AVAENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~-~~~~g~~~nI~~~~  234 (427)
                      +++++|+|+++..++... ....+..|++.++.
T Consensus       229 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        229 MVEPEDIAATALFLASPAARYITGQAISVDGNV  261 (264)
T ss_pred             CCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence            899999999998887532 23467889998874

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.3e-15  Score=143.86  Aligned_cols=192  Identities=15%  Similarity=0.108  Sum_probs=125.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|++++...+....           .++.++.+|++|++++.++++ 
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~   71 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----------GLVVGGPLDVTDPASFAAFLDA   71 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----------ccceEEEccCCCHHHHHHHHHH
Confidence            55679999999999999999999999999999999987655442211           134588999999998766553 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|....++           .+++|+.+..++++++    .+.+..+||++||.+...+.     .+
T Consensus        72 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  146 (273)
T PRK07825         72 VEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----PG  146 (273)
T ss_pred             HHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----CC
Confidence                  5799999999754332           3456776666665554    55678899999987632111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      ...|......-..  ..+.+...+...|+++++++||++.....   ...    ..  .....+++.+|+|+.++.++.+
T Consensus       147 ~~~Y~asKaa~~~--~~~~l~~el~~~gi~v~~v~Pg~v~t~~~---~~~----~~--~~~~~~~~~~~va~~~~~~l~~  215 (273)
T PRK07825        147 MATYCASKHAVVG--FTDAARLELRGTGVHVSVVLPSFVNTELI---AGT----GG--AKGFKNVEPEDVAAAIVGTVAK  215 (273)
T ss_pred             CcchHHHHHHHHH--HHHHHHHHhhccCcEEEEEeCCcCcchhh---ccc----cc--ccCCCCCCHHHHHHHHHHHHhC
Confidence            1222211111000  01222233446799999999997654221   111    00  1122478999999999999875


Q ss_pred             c
Q 044905          220 T  220 (427)
Q Consensus       220 ~  220 (427)
                      +
T Consensus       216 ~  216 (273)
T PRK07825        216 P  216 (273)
T ss_pred             C
Confidence            4

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.67  E-value=4.4e-15  Score=141.92  Aligned_cols=195  Identities=17%  Similarity=0.124  Sum_probs=124.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+|+||||||++|.++++.|+++|++|++++|++.++..+....          ..++.++.+|++|.+++.++++    
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~i~~~~~~~~~   70 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----------GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------ccceEEEEecCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999987655543321          1234688999999998877664    


Q ss_pred             ---CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         ++|.|||++|.... .+           .+++|+.++..+++    ++.+.+.+++|++||.+....     ..+..
T Consensus        71 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~  145 (248)
T PRK10538         71 EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----YAGGN  145 (248)
T ss_pred             HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-----CCCCc
Confidence               68999999986421 11           34566667555544    445667889999998753211     11112


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC-CCCCCC-ccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE-DFSPES-SYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~-~~~~~~-~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .     |+..+ ...+.+.+.+    ...++.+++++||++. ...... .... .........+..+++.+|+|++++.
T Consensus       146 ~-----Y~~sK-~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dvA~~~~~  218 (248)
T PRK10538        146 V-----YGATK-AFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKAEKTYQNTVALTPEDVSEAVWW  218 (248)
T ss_pred             h-----hHHHH-HHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCc-HHHHHhhccccCCCCHHHHHHHHHH
Confidence            2     22222 1234443333    3568999999999653 211100 0000 0000001112246799999999999


Q ss_pred             HhcCcc
Q 044905          216 VFSNTA  221 (427)
Q Consensus       216 al~~~~  221 (427)
                      ++..+.
T Consensus       219 l~~~~~  224 (248)
T PRK10538        219 VATLPA  224 (248)
T ss_pred             HhcCCC
Confidence            987653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=4.7e-15  Score=140.59  Aligned_cols=192  Identities=14%  Similarity=0.150  Sum_probs=127.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||||++|.+++++|+++|++|++++|++.....+......       ...++.++.+|++|++++.++++   
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   79 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-------YGVKVVIATADVSDYEEVTAAIEQLK   79 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-------hCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999997655443221111       12356789999999999888776   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|+|||++|....+.           .+++|+.++.++++++.    ..+.+++|++||...+.+..     +..
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----~~~  154 (239)
T PRK07666         80 NELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA-----VTS  154 (239)
T ss_pred             HHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC-----CCc
Confidence                6899999998754321           34677778777877765    45678899998876322211     111


Q ss_pred             ccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHh
Q 044905          142 SFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      .|     ...+ .+.+.+.+    .+...|++++++|||.+......   .......    .+...++.+|+|+.+..++
T Consensus       155 ~Y-----~~sK-~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~---~~~~~~~----~~~~~~~~~~~a~~~~~~l  221 (239)
T PRK07666        155 AY-----SASK-FGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAV---DLGLTDG----NPDKVMQPEDLAEFIVAQL  221 (239)
T ss_pred             ch-----HHHH-HHHHHHHHHHHHHhhccCcEEEEEecCcccCcchh---hcccccc----CCCCCCCHHHHHHHHHHHH
Confidence            12     2111 12233333    23457899999999955432211   1111111    1124689999999999999


Q ss_pred             cCc
Q 044905          218 SNT  220 (427)
Q Consensus       218 ~~~  220 (427)
                      .+.
T Consensus       222 ~~~  224 (239)
T PRK07666        222 KLN  224 (239)
T ss_pred             hCC
Confidence            754

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.67  E-value=4.3e-15  Score=140.98  Aligned_cols=210  Identities=17%  Similarity=0.148  Sum_probs=134.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++++|+||||||+||++|++.|+++|++|+++.|...    ....+......       ...++.++.+|+.|.+++.++
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~   77 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-------AGGKALGLAFDVRDFAATRAA   77 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHH
Confidence            4579999999999999999999999999999876433    22222111110       123567899999999998887


Q ss_pred             hc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH-----HcCCCeEEEEecccccccccCC
Q 044905           79 IG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ-----LAGVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~-----~~gVk~~V~vSSs~v~~~~~~~  135 (427)
                      ++       ++|+|||++|.....+           .+.+|+.+..++++++.     ..+.+++|++||.+.+.+..  
T Consensus        78 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--  155 (249)
T PRK12827         78 LDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR--  155 (249)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC--
Confidence            63       5899999999765221           34678889999999887     46678999998876432211  


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecc-cccCCCCCcccHHHHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAE-ASVDANDYKVAKSQIA  210 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~-~~~~~~~~~i~v~DVA  210 (427)
                         +...|     ...+ .+.+.+.+.+.    ..+++++++|||.+......   ....... ........+.+.+|+|
T Consensus       156 ---~~~~y-----~~sK-~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~va  223 (249)
T PRK12827        156 ---GQVNY-----AASK-AGLIGLTKTLANELAPRGITVNAVAPGAINTPMAD---NAAPTEHLLNPVPVQRLGEPDEVA  223 (249)
T ss_pred             ---CCchh-----HHHH-HHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccc---ccchHHHHHhhCCCcCCcCHHHHH
Confidence               11222     2221 12344444333    45899999999966542211   1110000 0000111245899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++..++.+... ..++.+++.++
T Consensus       224 ~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        224 ALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             HHHHHHcCcccCCccCcEEEeCCC
Confidence            999988865322 34677887665

>PRK09135 pteridine reductase; Provisional

Probab=99.67  E-value=7.7e-15  Score=139.26  Aligned_cols=212  Identities=15%  Similarity=0.136  Sum_probs=130.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .++|+||||+|++|++++++|+++|++|++++|+.. ..+.+......      .....+.++.+|++|.+++..+++  
T Consensus         6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~   79 (249)
T PRK09135          6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNA------LRPGSAAALQADLLDPDALPELVAAC   79 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh------hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999998753 23332211100      001245689999999999888776  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|+|||++|.....+           ..++|+.++.++++++...   .-.+++.+++..  ..   ....+..
T Consensus        80 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~  154 (249)
T PRK09135         80 VAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIH--AE---RPLKGYP  154 (249)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChh--hc---CCCCCch
Confidence                 4799999999643211           4558888999999998642   123454444321  11   1111112


Q ss_pred             ccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCC-CCccceEEec--ccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSP-ESSYNVVVSA--EASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~-~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                           .|+..+ ...+.+.+.+.   ..+++++++|||++..... ..........  ......  .+.+++|+|+++..
T Consensus       155 -----~Y~~sK-~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~a~~~~~  226 (249)
T PRK09135        155 -----VYCAAK-AALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLK--RIGTPEDIAEAVRF  226 (249)
T ss_pred             -----hHHHHH-HHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcC--CCcCHHHHHHHHHH
Confidence                 333333 34666666654   2369999999985432111 1000000000  000111  24578999999976


Q ss_pred             HhcCcccccCcEEEEecCC
Q 044905          216 VFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~~~~g~~~nI~~~~  234 (427)
                      ++.......|.+|++.++.
T Consensus       227 ~~~~~~~~~g~~~~i~~g~  245 (249)
T PRK09135        227 LLADASFITGQILAVDGGR  245 (249)
T ss_pred             HcCccccccCcEEEECCCe
Confidence            6653333468999999986

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.67  E-value=4.2e-15  Score=140.87  Aligned_cols=218  Identities=17%  Similarity=0.074  Sum_probs=135.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+++|+||||||++|.+|++.|+++|++|+++ .|+......+......       ...++.++.+|++|++++..++.
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-------EGGDAIAVKADVSSEEDVENLVE   75 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHH
Confidence            346799999999999999999999999999998 8887654443322111       01245689999999999887775


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|+|||++|.....+           .+.+|+.+..++++++..    .+.+++|++||.+...+..     
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----  150 (247)
T PRK05565         76 QIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS-----  150 (247)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC-----
Confidence                   7899999999764322           345677787777776654    4567899998876432211     


Q ss_pred             CCCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                      ....|......-.  ...+.+...+...|++++.++||.+........................+.+.+|++++++.++.
T Consensus       151 ~~~~y~~sK~a~~--~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  228 (247)
T PRK05565        151 CEVLYSASKGAVN--AFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLAS  228 (247)
T ss_pred             CccHHHHHHHHHH--HHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            1111211110000  01222333334579999999999654422211110000000000111136789999999999886


Q ss_pred             Ccc-cccCcEEEEecC
Q 044905          219 NTA-VAENKVVKVFTD  233 (427)
Q Consensus       219 ~~~-~~~g~~~nI~~~  233 (427)
                      ... ...|+.+++.++
T Consensus       229 ~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        229 DDASYITGQIITVDGG  244 (247)
T ss_pred             CccCCccCcEEEecCC
Confidence            543 346788887765

>PRK09186 flagellin modification protein A; Provisional

Probab=99.67  E-value=3.8e-15  Score=142.42  Aligned_cols=221  Identities=15%  Similarity=0.172  Sum_probs=131.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ..++|+||||||+||+++++.|+++|++|+++.|++.+...+......     ......+.++.+|++|++++.++++. 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGK-----EFKSKKLSLVELDITDQESLEEFLSKS   77 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh-----hcCCCceeEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765544322110     00112345779999999998887763 


Q ss_pred             ------cCEEEEccCCCCC---CC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCC
Q 044905           82 ------AGKVVVTIGPTED---GP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        82 ------~d~Vi~~ag~~~~---~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                            +|+|||+++....   ..           ..++|+.+...+    +.++++.+.++||++||............
T Consensus        78 ~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  157 (256)
T PRK09186         78 AEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIY  157 (256)
T ss_pred             HHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhc
Confidence                  7999999975321   11           234455455444    44455567789999998653221111000


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ++.+......|+.++ ...+.+.+.+.    ..++++++++||.+.+....   .+ ............+++.+|+|+++
T Consensus       158 ~~~~~~~~~~Y~~sK-~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~---~~-~~~~~~~~~~~~~~~~~dva~~~  232 (256)
T PRK09186        158 EGTSMTSPVEYAAIK-AGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE---AF-LNAYKKCCNGKGMLDPDDICGTL  232 (256)
T ss_pred             cccccCCcchhHHHH-HHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH---HH-HHHHHhcCCccCCCCHHHhhhhH
Confidence            111110111233322 23444443333    46899999999955432111   00 00000001112478999999999


Q ss_pred             HHHhcCcccc-cCcEEEEecC
Q 044905          214 ADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~~-~g~~~nI~~~  233 (427)
                      ..++++.... .|..+.+.++
T Consensus       233 ~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        233 VFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             hheeccccccccCceEEecCC
Confidence            9999754333 4666666655

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.66  E-value=4.4e-15  Score=142.24  Aligned_cols=212  Identities=14%  Similarity=0.112  Sum_probs=136.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||++++++|+++|++|+++.|+..+...+......       ...++.++.+|++|.+++..+++  
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   81 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-------QGLSAHALAFDVTDHDAVRAAIDAF   81 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-------cCceEEEEEccCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999997655443321111       01245688999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ..|+|||++|.....+           .+.+|+.++.++++++..    .+.++||++||......     ..+.
T Consensus        82 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-----~~~~  156 (255)
T PRK07523         82 EAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-----RPGI  156 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC-----CCCC
Confidence                 4799999999754332           345777888888887764    36778999987652111     1112


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc--ceEEe--cccccCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY--NVVVS--AEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~--~i~~~--~~~~~~~~~~~i~v~DVA~~  212 (427)
                      ..|     +..+ .+.+.+.+.+.    ..|+++..+|||.+.........  .....  ....+..  .+.+.+|||.+
T Consensus       157 ~~y-----~~sK-~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  228 (255)
T PRK07523        157 APY-----TATK-GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAG--RWGKVEELVGA  228 (255)
T ss_pred             ccH-----HHHH-HHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCC--CCcCHHHHHHH
Confidence            222     2221 22444444333    56899999999855432111000  00000  0011111  36789999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +..++..... ..|..+++.++.
T Consensus       229 ~~~l~~~~~~~~~G~~i~~~gg~  251 (255)
T PRK07523        229 CVFLASDASSFVNGHVLYVDGGI  251 (255)
T ss_pred             HHHHcCchhcCccCcEEEECCCe
Confidence            9999875322 357888887774

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.66  E-value=4.6e-16  Score=147.57  Aligned_cols=276  Identities=9%  Similarity=0.060  Sum_probs=181.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.++|||+.||||++.+..+...-  ++.+.++.=.-  .+..+...         ....+..++.+|+.|...+...+.
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~---------~n~p~ykfv~~di~~~~~~~~~~~   77 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV---------RNSPNYKFVEGDIADADLVLYLFE   77 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh---------ccCCCceEeeccccchHHHHhhhc
Confidence            689999999999999999999873  66665552110  12222111         124577899999999998888775


Q ss_pred             --CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccCCCCC-CCC-ccchhhh
Q 044905           81 --NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTYNVLD-GIS-SFFNNLF  148 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~~~~~-~~~-~~~~~~~  148 (427)
                        ..|.|+|.|+-...     ++  +...|+.++..++++++.. ++++||++||..||++++..+.. ..+ +-+.+.|
T Consensus        78 ~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpy  157 (331)
T KOG0747|consen   78 TEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPY  157 (331)
T ss_pred             cCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCch
Confidence              58999998875432     11  5678888999999999998 59999999999999998876654 222 2233566


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-C-----------ccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-S-----------SYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~-----------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ++++ +++|.+.+.+. +.|++++++|-+ .+++...+ .           .....+.|.+...+  +|+|++|+++++-
T Consensus       158 AasK-aAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~r--s~l~veD~~ea~~  234 (331)
T KOG0747|consen  158 AASK-AAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTR--SYLYVEDVSEAFK  234 (331)
T ss_pred             HHHH-HHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccce--eeEeHHHHHHHHH
Confidence            6665 67888887776 679999999964 44432221 0           01112222222222  6999999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc-cc---hhhhHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHhhH
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED-GR---RAAYAEALA-KEKAEKEARIAAEKA-REAAEAATKLE  288 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~-~~---~~~~~~~~~-~~~~~eea~~~~~~a-~~~~~~~~~l~  288 (427)
                      .++..  ...|++|||++.......++.+.+..+.+. ..   ...|...++ +.......+..-+|. .+.|.+....+
T Consensus       235 ~v~~K--g~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik~LGw~~~~p~~  312 (331)
T KOG0747|consen  235 AVLEK--GELGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIKKLGWRPTTPWE  312 (331)
T ss_pred             HHHhc--CCccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHHhcCCcccCcHH
Confidence            88875  346999999999866666665555554332 11   112222222 222222233334443 46666777787


Q ss_pred             HHHhhh
Q 044905          289 EEVKKL  294 (427)
Q Consensus       289 ~~~~~~  294 (427)
                      ++++++
T Consensus       313 eGLrkt  318 (331)
T KOG0747|consen  313 EGLRKT  318 (331)
T ss_pred             HHHHHH
Confidence            877754

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.66  E-value=8.1e-15  Score=139.65  Aligned_cols=212  Identities=15%  Similarity=0.101  Sum_probs=133.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|++|++|++.|+++|++|+++.|+.+..........        ...++.++.+|++|++++.++++  
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~i   75 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--------AGGRAFARQGDVGSAEAVEALVDFV   75 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--------cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            45799999999999999999999999999999999765443322110        01245689999999999988775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|......           .+.+|+.++.+++++    ++..+.++|+++||.+...+..     +.
T Consensus        76 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----~~  150 (252)
T PRK06138         76 AARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR-----GR  150 (252)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC-----Cc
Confidence                 6899999999754322           245677777665554    4556788999999875322111     11


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-cceEEecc----cccCCCC-CcccHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-YNVVVSAE----ASVDAND-YKVAKSQIA  210 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-~~i~~~~~----~~~~~~~-~~i~v~DVA  210 (427)
                      ..|     ...+ .+.+.+.+.+    ...+++++.+|||.+........ ........    .....+. .+++.+|+|
T Consensus       151 ~~Y-----~~sK-~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  224 (252)
T PRK06138        151 AAY-----VASK-GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVA  224 (252)
T ss_pred             cHH-----HHHH-HHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHH
Confidence            222     2221 2234444443    34589999999985533211100 00000000    0000111 378999999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++..++.++.. ..|..+.+.++
T Consensus       225 ~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        225 QAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             HHHHHHcCchhcCccCCEEEECCC
Confidence            999999876533 24667777654

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.66  E-value=5.8e-15  Score=141.78  Aligned_cols=216  Identities=12%  Similarity=0.091  Sum_probs=136.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+..+.+.+......       ...++.++.+|++|++++.++++ 
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-------~~~~~~~~~~Dl~d~~~i~~~~~~   82 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-------LGIDALWIAADVADEADIERLAEE   82 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEEccCCCHHHHHHHHHH
Confidence            4568999999999999999999999999999999987654433221110       02345689999999999866554 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc-----CCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA-----GVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~-----gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            +.|+|||++|.....+           .+++|+.++.++++++...     +.++||++||.+.+.+... ...
T Consensus        83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~-~~~  161 (259)
T PRK08213         83 TLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP-EVM  161 (259)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc-ccc
Confidence                  5799999998643221           3458888999999987654     6779999988754322111 001


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ceEEec-ccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NVVVSA-EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i~~~~-~~~~~~~~~~i~v~DVA~~  212 (427)
                      +..     .|...+ ...+.+.+.+.    ..|+++.+++||.+......... .+.... ...+..  .+...+|||.+
T Consensus       162 ~~~-----~Y~~sK-a~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~  233 (259)
T PRK08213        162 DTI-----AYNTSK-GAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLG--RLGDDEDLKGA  233 (259)
T ss_pred             Ccc-----hHHHHH-HHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCC--CCcCHHHHHHH
Confidence            111     222221 22444444432    46899999999966542211100 000000 001111  24578999999


Q ss_pred             HHHHhcCcccc-cCcEEEEecC
Q 044905          213 VADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      +..++.....+ .|..+.+.++
T Consensus       234 ~~~l~~~~~~~~~G~~~~~~~~  255 (259)
T PRK08213        234 ALLLASDASKHITGQILAVDGG  255 (259)
T ss_pred             HHHHhCccccCccCCEEEECCC
Confidence            98888654333 5777777665

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.66  E-value=1e-14  Score=138.39  Aligned_cols=195  Identities=14%  Similarity=0.142  Sum_probs=127.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ++++++||||||++|+.|++.|+++|++|++++|++.....+......       ...++.++.+|++|.+++..+++  
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   77 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-------TGVKAAAYSIDLSNPEAIAPGIAEL   77 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------CCCcEEEEEccCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999998765444322111       12356689999999998877765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+.+|+.+..++++++    .+.+.+++|++||...+.+.     .+.
T Consensus        78 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~  152 (241)
T PRK07454         78 LEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF-----PQW  152 (241)
T ss_pred             HHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC-----CCc
Confidence                 4899999998653221           3456677777766655    44566789999887643221     111


Q ss_pred             CccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      ..     |...+ ...+.+.+.    +...|++++++|||.+......  .....    ........++.+|+|++++.+
T Consensus       153 ~~-----Y~~sK-~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~--~~~~~----~~~~~~~~~~~~~va~~~~~l  220 (241)
T PRK07454        153 GA-----YCVSK-AALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWD--TETVQ----ADFDRSAMLSPEQVAQTILHL  220 (241)
T ss_pred             cH-----HHHHH-HHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccc--ccccc----cccccccCCCHHHHHHHHHHH
Confidence            22     22211 123333333    2356899999999965432211  00000    000111368999999999999


Q ss_pred             hcCcc
Q 044905          217 FSNTA  221 (427)
Q Consensus       217 l~~~~  221 (427)
                      +.++.
T Consensus       221 ~~~~~  225 (241)
T PRK07454        221 AQLPP  225 (241)
T ss_pred             HcCCc
Confidence            98663

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.66  E-value=4.9e-15  Score=142.10  Aligned_cols=209  Identities=15%  Similarity=0.081  Sum_probs=137.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||++|++.|+++|++|+++.|+......+....          ..++.++.+|++|.+++..++.  
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~   74 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI----------GPAAIAVSLDVTRQDSIDRIVAAA   74 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh----------CCceEEEEccCCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999987655443211          1235688999999998887775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcC-----CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAG-----VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~g-----Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .+|++||++|....++           .+++|+.++.++++++....     -.+||++||.....+.     .+
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~  149 (257)
T PRK07067         75 VERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE-----AL  149 (257)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC-----CC
Confidence                 5799999998653221           46688889999999886532     2479999876421111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-------ceEE------ecccccCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-------NVVV------SAEASVDANDY  202 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-------~i~~------~~~~~~~~~~~  202 (427)
                      ..     .|+.++ .+.+.+.+.+    ...|+++++|+||++.........       ....      .+...+..  .
T Consensus       150 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  221 (257)
T PRK07067        150 VS-----HYCATK-AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLG--R  221 (257)
T ss_pred             Cc-----hhhhhH-HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCC--C
Confidence            12     222222 2234444433    357899999999965432110000       0000      00111111  4


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+|||++++.++..... ..|.+|++.++.
T Consensus       222 ~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  254 (257)
T PRK07067        222 MGVPDDLTGMALFLASADADYIVAQTYNVDGGN  254 (257)
T ss_pred             ccCHHHHHHHHHHHhCcccccccCcEEeecCCE
Confidence            78999999999998875433 368999998874

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.66  E-value=7.6e-15  Score=139.54  Aligned_cols=213  Identities=15%  Similarity=0.146  Sum_probs=137.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||++|++.|+++|++|+++.|++.+...+......       ...++.++.+|++|.+++.++++ 
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   77 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA-------AGGRAHAIAADLADPASVQRFFDA   77 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999987655444321110       01345689999999999888774 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           ..+.|+.++.++++++..    .+..+||++||.+.+.+.     ..
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  152 (250)
T PRK12939         78 AAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA-----PK  152 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-----CC
Confidence                  6899999999754321           345778888888887754    345589999886532111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc--eE-EecccccCCCCCcccHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN--VV-VSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~--i~-~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      ...     |...+ ...+.+.+.+    ...+++++.++||.+..........  .. .........  .+++.+|+|++
T Consensus       153 ~~~-----y~~sK-~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  224 (250)
T PRK12939        153 LGA-----YVASK-GAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALE--RLQVPDDVAGA  224 (250)
T ss_pred             cch-----HHHHH-HHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCC--CCCCHHHHHHH
Confidence            111     22211 2244444433    2468999999999654322110000  00 000011111  46899999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +..++..+.. ..|+.+.+.++.
T Consensus       225 ~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        225 VLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             HHHHhCccccCccCcEEEECCCc
Confidence            9998875432 368888887763

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.65  E-value=8.5e-15  Score=138.91  Aligned_cols=209  Identities=14%  Similarity=0.094  Sum_probs=135.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.++...+....            +..++.+|++|.+++.+++. 
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~v~~~~~~   74 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------------GCEPLRLDVGDDAAIRAALAA   74 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------CCeEEEecCCCHHHHHHHHHH
Confidence            34478999999999999999999999999999999987655443221            22478899999998888776 


Q ss_pred             --CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        ++|+|||++|....+.           .+.+|+.+..++++++...    + .++||++||.+.+.+..     +...
T Consensus        75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----~~~~  149 (245)
T PRK07060         75 AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-----DHLA  149 (245)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----CCcH
Confidence              4899999998754321           3457778888888877653    2 46899998876322211     1111


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC--CccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE--SSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~--~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           |...+ ...+.+.+.+.    ..+++++.+|||.+......  +.................+++.+|+|++++.+
T Consensus       150 -----y~~sK-~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l  223 (245)
T PRK07060        150 -----YCASK-AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFL  223 (245)
T ss_pred             -----hHHHH-HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence                 22222 22444444433    45899999999955432110  00000000000001112479999999999999


Q ss_pred             hcCcc-cccCcEEEEecC
Q 044905          217 FSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~-~~~g~~~nI~~~  233 (427)
                      +..+. ...|..+++.++
T Consensus       224 ~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        224 LSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             cCcccCCccCcEEeECCC
Confidence            87543 235788887665

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.65  E-value=1e-14  Score=139.48  Aligned_cols=198  Identities=15%  Similarity=0.142  Sum_probs=123.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-Cc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-NA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-g~   82 (427)
                      +++|+||||||+||+++++.|+++|++|++++|++.....+......       ...++.++.+|++|++++.+++. ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR-------RGLALRVEKLDLTDAIDRAQAAEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcceEEEeeCCCHHHHHHHhcCCC
Confidence            46899999999999999999999999999999987655444332211       01246689999999999999887 89


Q ss_pred             CEEEEccCCCCCCC-----------CccccHHHHHHHH----HHHHHcCCCeEEEEecccccccccCCCCCCCCccchhh
Q 044905           83 GKVVVTIGPTEDGP-----------TSEVSTSDAFQVI----QAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNL  147 (427)
Q Consensus        83 d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll----~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~  147 (427)
                      |+|||++|....++           .+++|+.+..++.    ..+.+.+.++||++||.+...+.     ....     .
T Consensus        75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~-----~~~~-----~  144 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG-----PFTG-----A  144 (257)
T ss_pred             CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC-----CCcc-----h
Confidence            99999999764332           2345555555444    45556777899999876521111     1111     2


Q ss_pred             hhccccccHHHHHHH----HhcCCCeEEEEeCCCCC-CCCCCCccce--EE-ecc-----cccCCCCCcccHHHHHHHHH
Q 044905          148 FSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTE-DFSPESSYNV--VV-SAE-----ASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~-~~~~~~~~~i--~~-~~~-----~~~~~~~~~i~v~DVA~~v~  214 (427)
                      |+.++ .+.+.+.+.    +...|+++++||||++. ++........  .. ...     .....+.+.++.+|++..++
T Consensus       145 Y~~sK-~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T PRK09291        145 YCASK-HALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMV  223 (257)
T ss_pred             hHHHH-HHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHH
Confidence            22222 224444333    33579999999999543 3211000000  00 000     00111224578888888888


Q ss_pred             HHhcC
Q 044905          215 DVFSN  219 (427)
Q Consensus       215 ~al~~  219 (427)
                      .++..
T Consensus       224 ~~l~~  228 (257)
T PRK09291        224 EVIPA  228 (257)
T ss_pred             HHhcC
Confidence            77754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.65  E-value=1.3e-14  Score=138.18  Aligned_cols=212  Identities=18%  Similarity=0.156  Sum_probs=134.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||||+||++++++|+++|++|+++.++ +...+.+......       ...++.++.+|++|.+++.++++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~   76 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-------EGHDVYAVQADVSKVEDANRLVE   76 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHH
Confidence            445799999999999999999999999999876553 3333333221111       01245689999999999888776


Q ss_pred             C-------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 N-------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 g-------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                      .       +|+|||++|......           .+++|+.++.++++++..    .+..+||++||.....+.     .
T Consensus        77 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~  151 (247)
T PRK12935         77 EAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----F  151 (247)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----C
Confidence            4       799999999754321           356788888888888864    345689999876522111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-eEEec-ccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-VVVSA-EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i~~~~-~~~~~~~~~~i~v~DVA~~  212 (427)
                      +...|     ...+ .+.+.+.+.+    ...++++++++||.+.......... ..... .....  ..+++++|++++
T Consensus       152 ~~~~Y-----~~sK-~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~edva~~  223 (247)
T PRK12935        152 GQTNY-----SAAK-AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPK--KRFGQADEIAKG  223 (247)
T ss_pred             CCcch-----HHHH-HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCC--CCCcCHHHHHHH
Confidence            11222     2222 1233343333    2468999999999664321110000 00000 01111  147899999999


Q ss_pred             HHHHhcCcccccCcEEEEecC
Q 044905          213 VADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~  233 (427)
                      ++.++.......++.|++.++
T Consensus       224 ~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        224 VVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             HHHHcCcccCccCCEEEeCCC
Confidence            999886432246889999887

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.64  E-value=1.7e-14  Score=136.63  Aligned_cols=210  Identities=17%  Similarity=0.175  Sum_probs=133.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..++++||||||+||+++++.|+++|+.|++..|+..+.+.+....          ..++.++.+|++|.+++..++  
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----------GERVKIFPANLSDRDEVKALGQK   73 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------CCceEEEEccCCCHHHHHHHHHH
Confidence            34579999999999999999999999999998888876655443211          123468899999999888765  


Q ss_pred             -----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           80 -----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        80 -----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .++|+|||++|.....+           .+++|+.+..++++++..    .+.++||++||.+...+..     .
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----~  148 (245)
T PRK12936         74 AEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP-----G  148 (245)
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC-----C
Confidence                 35899999999754221           456777788888777643    4667899998865322211     1


Q ss_pred             CCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ...|.     ..+ .+.+.+.+    .+...+++++.++||+++.............  ....+..  .+.+.+|+++++
T Consensus       149 ~~~Y~-----~sk-~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ia~~~  220 (245)
T PRK12936        149 QANYC-----ASK-AGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMK--RMGTGAEVASAV  220 (245)
T ss_pred             CcchH-----HHH-HHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCC--CCcCHHHHHHHH
Confidence            11222     111 11222222    2335689999999996654221110000000  0001111  256799999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..++..... ..|+.+++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12936        221 AYLASSEAAYVTGQTIHVNGGM  242 (245)
T ss_pred             HHHcCccccCcCCCEEEECCCc
Confidence            888865432 257888887763

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.63  E-value=4.1e-14  Score=137.88  Aligned_cols=204  Identities=14%  Similarity=0.163  Sum_probs=127.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|+++.|+...+..+......       ...++.++.+|++|.+++.+++. 
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~   76 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA-------EGFDVHGVMCDVRHREEVTHLADE   76 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEeCCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999997655443221110       01245678999999999887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcC-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|+|||++|....++           .+++|+.+..++++++.    +.+ ..+||++||...+...     .
T Consensus        77 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----~  151 (275)
T PRK05876         77 AFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----A  151 (275)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----C
Confidence                  4799999999643322           34678888888888774    344 4689999877632111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceE---Ee------cccccCCCCCcccHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVV---VS------AEASVDANDYKVAKSQI  209 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~---~~------~~~~~~~~~~~i~v~DV  209 (427)
                      +...|....+.-.  ...+.+...+...|+++++++||++..........+.   ..      ..........+++++|+
T Consensus       152 ~~~~Y~asK~a~~--~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (275)
T PRK05876        152 GLGAYGVAKYGVV--GLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDI  229 (275)
T ss_pred             CCchHHHHHHHHH--HHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHH
Confidence            1122222111100  0123333334457899999999966543211100000   00      00000011247899999


Q ss_pred             HHHHHHHhcC
Q 044905          210 ASLVADVFSN  219 (427)
Q Consensus       210 A~~v~~al~~  219 (427)
                      |+.++.++..
T Consensus       230 a~~~~~ai~~  239 (275)
T PRK05876        230 AQLTADAILA  239 (275)
T ss_pred             HHHHHHHHHc
Confidence            9999998863

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.63  E-value=6.4e-15  Score=143.40  Aligned_cols=153  Identities=14%  Similarity=0.187  Sum_probs=109.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +++|+||||||+||+++++.|+++|++|++++|+++.+..+...             ++.++.+|++|.+++.++++   
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~-------------~~~~~~~Dl~d~~~~~~~~~~~~   70 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE-------------GLEAFQLDYAEPESIAALVAQVL   70 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-------------CceEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998766655432             23588999999988877654   


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHH----HHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSD----AFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~----~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           .+|+|||++|....++           .+++|+.+    +.+++..+++.+.++||++||...+.     .....
T Consensus        71 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~-----~~~~~  145 (277)
T PRK05993         71 ELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLV-----PMKYR  145 (277)
T ss_pred             HHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcC-----CCCcc
Confidence                 4699999998654332           34567666    55667777788888999998765211     11111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTED  180 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~  180 (427)
                      .     .|+.++ .+.+.+.+.+    ...|+++++|+||++..
T Consensus       146 ~-----~Y~asK-~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T  183 (277)
T PRK05993        146 G-----AYNASK-FAIEGLSLTLRMELQGSGIHVSLIEPGPIET  183 (277)
T ss_pred             c-----hHHHHH-HHHHHHHHHHHHHhhhhCCEEEEEecCCccC
Confidence            2     232222 2345555443    35789999999996653

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.63  E-value=3.3e-14  Score=135.89  Aligned_cols=211  Identities=11%  Similarity=0.047  Sum_probs=132.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++|+||||||+||++|++.|+++|++|++++|+... ...+......       ...++.++.+|++|.+++.++++  
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   74 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-------LGVEVIFFPADVADLSAHEAMLDAA   74 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999987542 2222111000       02356789999999988777664  


Q ss_pred             -----CcCEEEEccCCCCCC--C-----------CccccHHHHHHHHHHHHHc-----C-----CCeEEEEecccccccc
Q 044905           81 -----NAGKVVVTIGPTEDG--P-----------TSEVSTSDAFQVIQAAQLA-----G-----VGHVAIIYDGNTTAAS  132 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~--~-----------~~~vn~~~~~~ll~Aa~~~-----g-----Vk~~V~vSSs~v~~~~  132 (427)
                           .+|+|||++|.....  +           .+++|+.++.++++++...     +     +.+||++||.....+.
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  154 (256)
T PRK12745         75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS  154 (256)
T ss_pred             HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC
Confidence                 579999999864211  1           3568888898988887542     1     5679999887632221


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-CccceE--EecccccCCCCCccc
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-SSYNVV--VSAEASVDANDYKVA  205 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~~~~i~--~~~~~~~~~~~~~i~  205 (427)
                      .     +...     |+..+ .+.+.+.+.+.    ..|+++++++||.+...... ......  ......+..  .+.+
T Consensus       155 ~-----~~~~-----Y~~sK-~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~  221 (256)
T PRK12745        155 P-----NRGE-----YCISK-AGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMP--RWGE  221 (256)
T ss_pred             C-----CCcc-----cHHHH-HHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcC--CCcC
Confidence            1     1122     22221 22444444443    46899999999955432111 000000  000001111  3678


Q ss_pred             HHHHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      ..|+++++..++.... ...|..|++.++.
T Consensus       222 ~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~  251 (256)
T PRK12745        222 PEDVARAVAALASGDLPYSTGQAIHVDGGL  251 (256)
T ss_pred             HHHHHHHHHHHhCCcccccCCCEEEECCCe
Confidence            9999999998886432 2357899998874

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.62  E-value=1.8e-14  Score=138.50  Aligned_cols=194  Identities=13%  Similarity=0.143  Sum_probs=125.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      |++|+||||||+||+++++.|+++|++|++++|+......+.....         ..++.++.+|++|.+++.+++.   
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~~~~   71 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---------AGNAWTGALDVTDRAAWDAALADFA   71 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---------CCceEEEEecCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999876555533211         1345689999999998887765   


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           .+|+|||++|....+.           .+++|+.++.++++++.    ..+..++|++||.....+..     ..
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----~~  146 (260)
T PRK08267         72 AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP-----GL  146 (260)
T ss_pred             HHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC-----Cc
Confidence                 4599999999754322           45678888888887764    34567899998765322111     11


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      .     .|+.++ ...+.+.+.+    ...+++++.++||++................... .+ ..++.+|+|+.++.+
T Consensus       147 ~-----~Y~~sK-aa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~-~~-~~~~~~~va~~~~~~  218 (260)
T PRK08267        147 A-----VYSATK-FAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKR-LG-VRLTPEDVAEAVWAA  218 (260)
T ss_pred             h-----hhHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhh-cc-CCCCHHHHHHHHHHH
Confidence            1     122221 1233333333    3568999999999654321110000000000000 11 246779999999998


Q ss_pred             hcC
Q 044905          217 FSN  219 (427)
Q Consensus       217 l~~  219 (427)
                      +..
T Consensus       219 ~~~  221 (260)
T PRK08267        219 VQH  221 (260)
T ss_pred             HhC
Confidence            863

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.62  E-value=4.4e-15  Score=161.96  Aligned_cols=202  Identities=11%  Similarity=0.155  Sum_probs=128.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..|+|||||||||||++|++.|+++|++|..                               ..+|++|.+.+...+. 
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------------~~~~l~d~~~v~~~i~~  426 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------------GKGRLEDRSSLLADIRN  426 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------------eccccccHHHHHHHHHh
Confidence            46679999999999999999999999998731                               1235667777777776 


Q ss_pred             -CcCEEEEccCCCCC--------CC--CccccHHHHHHHHHHHHHcCCCeEEEEeccccccccc-------CCCCCC-CC
Q 044905           81 -NAGKVVVTIGPTED--------GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAAST-------YNVLDG-IS  141 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~--------~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~-------~~~~~~-~~  141 (427)
                       +.|+|||+|+....        .+  .+.+|+.++.+|+++|++.|++ ++++||.++|.+..       .+..+. .+
T Consensus       427 ~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        427 VKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             hCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCC
Confidence             68999999987531        11  4578999999999999999995 56677777654321       111111 11


Q ss_pred             ccchhhhhccccccHHHHHHHHhcCCCeEEEEeCC--C------CCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS--L------TEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG--~------~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ....+.|+.+| +..|.++..+.    ++.++|+.  +      ..+|..    .+.... .....+.+..+++|++.++
T Consensus       506 ~~~~~~Yg~sK-~~~E~~~~~~~----~~~~~r~~~~~~~~~~~~~nfv~----~~~~~~-~~~~vp~~~~~~~~~~~~~  575 (668)
T PLN02260        506 NFTGSFYSKTK-AMVEELLREYD----NVCTLRVRMPISSDLSNPRNFIT----KISRYN-KVVNIPNSMTVLDELLPIS  575 (668)
T ss_pred             CCCCChhhHHH-HHHHHHHHhhh----hheEEEEEEecccCCCCccHHHH----HHhccc-eeeccCCCceehhhHHHHH
Confidence            12235677665 66787775542    23334432  1      111111    111111 1111123467788888887


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +.++...   .+++||++++.   ..++.|++..+.+.
T Consensus       576 ~~l~~~~---~~giyni~~~~---~~s~~e~a~~i~~~  607 (668)
T PLN02260        576 IEMAKRN---LRGIWNFTNPG---VVSHNEILEMYKDY  607 (668)
T ss_pred             HHHHHhC---CCceEEecCCC---cCcHHHHHHHHHHh
Confidence            8777531   36899999998   56677777777554

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2.6e-14  Score=134.77  Aligned_cols=202  Identities=18%  Similarity=0.174  Sum_probs=128.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |+.++|+||||||++|+++++.|+++|++|+++.|+...  ..   ..             .++.+|++|.+++.++++ 
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~--~~---~~-------------~~~~~D~~~~~~~~~~~~~   62 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID--DF---PG-------------ELFACDLADIEQTAATLAQ   62 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc--cc---Cc-------------eEEEeeCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999998753  11   11             378999999998887776 


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.+..+++++    +++.+.+++|++||.+.++..      ..
T Consensus        63 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------~~  136 (234)
T PRK07577         63 INEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------DR  136 (234)
T ss_pred             HHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC------Cc
Confidence                 6899999999754322           244555565555544    455678899999987643221      11


Q ss_pred             CccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccc--cCCCC-CcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEAS--VDAND-YKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~--~~~~~-~~i~v~DVA~~v  213 (427)
                      ..     |...+ ...+.+.+.    +...|++++.++||++..................  ...+. .....+|+|.++
T Consensus       137 ~~-----Y~~sK-~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  210 (234)
T PRK07577        137 TS-----YSAAK-SALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAI  210 (234)
T ss_pred             hH-----HHHHH-HHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHH
Confidence            11     22221 123333333    3356899999999965432111110100000000  00011 235789999999


Q ss_pred             HHHhcCcc-cccCcEEEEecC
Q 044905          214 ADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~-~~~g~~~nI~~~  233 (427)
                      +.++..+. ...|..+.+.++
T Consensus       211 ~~l~~~~~~~~~g~~~~~~g~  231 (234)
T PRK07577        211 AFLLSDDAGFITGQVLGVDGG  231 (234)
T ss_pred             HHHhCcccCCccceEEEecCC
Confidence            99887542 235777777655

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.62  E-value=4.3e-14  Score=135.90  Aligned_cols=196  Identities=15%  Similarity=0.128  Sum_probs=127.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +++|+||||+|++|+++++.|+++|++|++++|+....+.+......       ...++.++.+|++|.+++..++.   
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-------HGGEALVVPTDVSDAEACERLIEAAV   73 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999997654443221110       02355688999999998887765   


Q ss_pred             ----CcCEEEEccCCCCCCC------------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          +.|+|||++|......            .+++|+.++.++++++..   .+.+++|++||...+.+.     .+..
T Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~  148 (263)
T PRK06181         74 ARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----PTRS  148 (263)
T ss_pred             HHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----CCcc
Confidence                6799999998654321            256778888899888753   245789988877643211     1111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc---ceEEecccccCCCCCcccHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY---NVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~---~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                           .|+..+ ...+.+.+.+    ...++++++++||.+.........   ......  .......+++++|+|++++
T Consensus       149 -----~Y~~sK-~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~i~  220 (263)
T PRK06181        149 -----GYAASK-HALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGK--SPMQESKIMSAEECAEAIL  220 (263)
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccccccc--ccccccCCCCHHHHHHHHH
Confidence                 222222 2234444333    356899999999955432211000   000000  0111115899999999999


Q ss_pred             HHhcC
Q 044905          215 DVFSN  219 (427)
Q Consensus       215 ~al~~  219 (427)
                      .++..
T Consensus       221 ~~~~~  225 (263)
T PRK06181        221 PAIAR  225 (263)
T ss_pred             HHhhC
Confidence            99873

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.62  E-value=5.3e-14  Score=135.05  Aligned_cols=210  Identities=14%  Similarity=0.061  Sum_probs=129.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++++||||+|+||+++++.|+++|++|+++.|+.. ...+......       ...++.++.+|++|.+++.++++ 
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   77 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA-------AGGEALALTADLETYAGAQAAMAA   77 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh-------cCCeEEEEEEeCCCHHHHHHHHHH
Confidence            55679999999999999999999999999999999853 2222111100       01234578999999888777664 


Q ss_pred             ------CcCEEEEccCCCC-CCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|... ..+           .+++|+.+...+    +..+++.+..+||++||.+.++.       
T Consensus        78 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-------  150 (260)
T PRK12823         78 AVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI-------  150 (260)
T ss_pred             HHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------
Confidence                  5799999998532 111           234565555544    44555667789999998764211       


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc------cc---eEEec------ccccCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS------YN---VVVSA------EASVDA  199 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~------~~---i~~~~------~~~~~~  199 (427)
                      ....     |+.+| .+.+.+.+.+.    ..|+++..|+||.+........      ..   .....      ...+..
T Consensus       151 ~~~~-----Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T PRK12823        151 NRVP-----YSAAK-GGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMK  224 (260)
T ss_pred             CCCc-----cHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcc
Confidence            1111     22222 23445554443    4589999999996543210000      00   00000      000111


Q ss_pred             CCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          200 NDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                        -+.+.+|||++++.++.+... ..|..+++.++.
T Consensus       225 --~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        225 --RYGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             --cCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence              245899999999998875322 357888887764

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.62  E-value=2.1e-14  Score=138.98  Aligned_cols=197  Identities=13%  Similarity=0.105  Sum_probs=124.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+|+||||||+||+++++.|+++|++|++++|+....+.+......       ...++.++.+|++|.+++..++.    
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~i~~   73 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE-------AGGDGFYQRCDVRDYSQLTALAQACEE   73 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999988765544322111       02345689999999988887764    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                         ++|+|||++|....+.           .+++|+.+..+++++    +++.+..+||++||......     ......
T Consensus        74 ~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~  148 (270)
T PRK05650         74 KWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ-----GPAMSS  148 (270)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----CCCchH
Confidence               6899999999765322           234666666665554    56677889999987753211     111122


Q ss_pred             cchhhhhccccccHH----HHHHHHhcCCCeEEEEeCCCCCCCCCCCcc-ceEE-ecccccCCCCCcccHHHHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVP----EFLQKVIETDVSYTFIKTSLTEDFSPESSY-NVVV-SAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E----~~l~~l~~~gl~~tilRPG~~~~~~~~~~~-~i~~-~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           |+..+ .+.+    .+...+...|+++++++||++......... .... ...........+++.+|+|+.++.+
T Consensus       149 -----Y~~sK-aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~  222 (270)
T PRK05650        149 -----YNVAK-AGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQ  222 (270)
T ss_pred             -----HHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHH
Confidence                 22221 1222    233333456899999999965442211100 0000 0000000011468999999999999


Q ss_pred             hcC
Q 044905          217 FSN  219 (427)
Q Consensus       217 l~~  219 (427)
                      +.+
T Consensus       223 l~~  225 (270)
T PRK05650        223 VAK  225 (270)
T ss_pred             HhC
Confidence            874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.61  E-value=6.6e-14  Score=133.34  Aligned_cols=211  Identities=15%  Similarity=0.121  Sum_probs=132.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .+++|+||||+|+||++|+++|+++|++|++..|+.. ...........       ...++.++.+|++|.+++..++. 
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   77 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-------NGGEGIGVLADVSTREGCETLAKA   77 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-------cCCeeEEEEeccCCHHHHHHHHHH
Confidence            4579999999999999999999999999988776542 22221111000       01234578899999988877664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            ++|+|||++|.....+           .+.+|+.+..++++++...  ..++||++||...+..     ..+..
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~~  152 (252)
T PRK06077         78 TIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP-----AYGLS  152 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC-----CCCch
Confidence                  5799999999644322           3466777788888877653  2357998887663211     11112


Q ss_pred             ccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceE---E---ecccccCCCCCcccHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVV---V---SAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~---~---~~~~~~~~~~~~i~v~DVA~~  212 (427)
                           .|+.++ ...+.+.+.+.   ..++.+.+++||++..........+.   .   .......  ..+++++|+|++
T Consensus       153 -----~Y~~sK-~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~  224 (252)
T PRK06077        153 -----IYGAMK-AAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLM--GKILDPEEVAEF  224 (252)
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcC--CCCCCHHHHHHH
Confidence                 222222 23455555443   23799999999965432111101100   0   0001111  147999999999


Q ss_pred             HHHHhcCcccccCcEEEEecCC
Q 044905          213 VADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      ++.++..+ ...++.|++.++.
T Consensus       225 ~~~~~~~~-~~~g~~~~i~~g~  245 (252)
T PRK06077        225 VAAILKIE-SITGQVFVLDSGE  245 (252)
T ss_pred             HHHHhCcc-ccCCCeEEecCCe
Confidence            99998744 3468899998875

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.61  E-value=6e-15  Score=139.98  Aligned_cols=213  Identities=16%  Similarity=0.131  Sum_probs=146.1

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKV   85 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~V   85 (427)
                      .-|+|||||+|+.+|.+|.+.|-+|++--|... ....|...|         |..++-+...|+.|+++++++++...+|
T Consensus        64 aTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG---------dLGQvl~~~fd~~DedSIr~vvk~sNVV  134 (391)
T KOG2865|consen   64 ATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG---------DLGQVLFMKFDLRDEDSIRAVVKHSNVV  134 (391)
T ss_pred             EEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc---------cccceeeeccCCCCHHHHHHHHHhCcEE
Confidence            578999999999999999999999998887654 222222111         2345568889999999999999999999


Q ss_pred             EEccCCCCC---CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           86 VVTIGPTED---GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        86 i~~ag~~~~---~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      |+++|-...   -.+.++|..++.+|.+.|+++||.+||++|+.+....       ..+.+   +.+|.   ..|.   .
T Consensus       135 INLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv~-------s~Sr~---LrsK~---~gE~---a  198 (391)
T KOG2865|consen  135 INLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANVK-------SPSRM---LRSKA---AGEE---A  198 (391)
T ss_pred             EEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccccc-------ChHHH---HHhhh---hhHH---H
Confidence            999996543   2256888889999999999999999999997762111       11111   12221   2342   2


Q ss_pred             HhcCCCeEEEEeCC-CC---CCCCCC----C--ccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEec
Q 044905          163 VIETDVSYTFIKTS-LT---EDFSPE----S--SYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFT  232 (427)
Q Consensus       163 l~~~gl~~tilRPG-~~---~~~~~~----~--~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~  232 (427)
                      +++.=-+.||+||. .+   +.|+..    |  ...+.+.+.+.... .++|++.|||.+++.++.+| .+.|++|...+
T Consensus       199 VrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~-K~PVyV~DVaa~IvnAvkDp-~s~Gktye~vG  276 (391)
T KOG2865|consen  199 VRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTV-KQPVYVVDVAAAIVNAVKDP-DSMGKTYEFVG  276 (391)
T ss_pred             HHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCccee-eccEEEehHHHHHHHhccCc-cccCceeeecC
Confidence            22232359999995 22   222221    1  11222322221111 15899999999999999987 57899999999


Q ss_pred             CCCCChhhHHHHHHHHH
Q 044905          233 DPSAPARRVDELFSAIA  249 (427)
Q Consensus       233 ~~~~~~~s~~ell~~i~  249 (427)
                      +.   ...+.|+++.+-
T Consensus       277 P~---~yql~eLvd~my  290 (391)
T KOG2865|consen  277 PD---RYQLSELVDIMY  290 (391)
T ss_pred             Cc---hhhHHHHHHHHH
Confidence            98   566666665553

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.61  E-value=5.2e-14  Score=138.50  Aligned_cols=191  Identities=12%  Similarity=0.119  Sum_probs=126.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||.++++.|+++|++|++++|+.+.++.+......       ...++.++.+|++|.+++.++++  
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~-------~~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-------AGGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            347899999999999999999999999999999998765544332111       01234588999999998888776  


Q ss_pred             -----CcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|++||++|.....+             .+++|+.+..++++++    +..+..++|++||.+.+.+..    .
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----p  187 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEAS----P  187 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC----C
Confidence                 7899999998654321             3456777777776654    456778999998865322110    1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ...     .|+.++ .+.+.+.+.+    ...|++++.++||++.....   ....      ...+...++.+++|+.++
T Consensus       188 ~~~-----~Y~asK-aal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~---~~~~------~~~~~~~~~pe~vA~~~~  252 (293)
T PRK05866        188 LFS-----VYNASK-AALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI---APTK------AYDGLPALTADEAAEWMV  252 (293)
T ss_pred             Ccc-----hHHHHH-HHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc---cccc------cccCCCCCCHHHHHHHHH
Confidence            111     222222 2234444443    35689999999997654321   1100      011123578999999999


Q ss_pred             HHhcC
Q 044905          215 DVFSN  219 (427)
Q Consensus       215 ~al~~  219 (427)
                      .++..
T Consensus       253 ~~~~~  257 (293)
T PRK05866        253 TAART  257 (293)
T ss_pred             HHHhc
Confidence            98864

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.61  E-value=5.3e-14  Score=141.05  Aligned_cols=207  Identities=14%  Similarity=0.079  Sum_probs=129.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|+++.|+...++.+......       ...++.++.+|++|.+++.++++ 
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~-------~g~~~~~v~~Dv~d~~~v~~~~~~   78 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA-------AGGEALAVVADVADAEAVQAAADR   78 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-------cCCcEEEEEecCCCHHHHHHHHHH
Confidence            3456899999999999999999999999999999998765544322111       01245688999999999887754 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHH----HHHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQ----VIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~----ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .+|++||++|....++           .+++|+.+..+    ++..++..+..+||++||...+...     ..
T Consensus        79 ~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~-----~~  153 (334)
T PRK07109         79 AEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI-----PL  153 (334)
T ss_pred             HHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC-----Cc
Confidence                  6899999999654322           33455444444    5555566667899999987643221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|..++ .+.+.+.+.+.      ..++.+++|+||.++.....+.... .......  ....++.+|+|+++
T Consensus       154 ~~-----~Y~asK-~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~--~~~~~~pe~vA~~i  224 (334)
T PRK07109        154 QS-----AYCAAK-HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR-LPVEPQP--VPPIYQPEVVADAI  224 (334)
T ss_pred             ch-----HHHHHH-HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh-ccccccC--CCCCCCHHHHHHHH
Confidence            11     222222 12333333322      2579999999996654211111111 1111111  11367899999999


Q ss_pred             HHHhcCcccccCcEEEEecC
Q 044905          214 ADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~  233 (427)
                      +.++.++    ...+.+++.
T Consensus       225 ~~~~~~~----~~~~~vg~~  240 (334)
T PRK07109        225 LYAAEHP----RRELWVGGP  240 (334)
T ss_pred             HHHHhCC----CcEEEeCcH
Confidence            9998754    345555543

>PLN02253 xanthoxin dehydrogenase

Probab=99.61  E-value=6.1e-14  Score=136.31  Aligned_cols=213  Identities=10%  Similarity=0.070  Sum_probs=136.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||++++++|+++|++|+++.|+......+.....        ...++.++.+|++|.+++.+++. 
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~   87 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--------GEPNVCFFHCDVTVEDDVSRAVDF   87 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--------CCCceEEEEeecCCHHHHHHHHHH
Confidence            445789999999999999999999999999999998765443322110        01356789999999999888776 


Q ss_pred             ------CcCEEEEccCCCCC--C-----------CCccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCC
Q 044905           81 ------NAGKVVVTIGPTED--G-----------PTSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~--~-----------~~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                            ++|++||++|....  .           ..+++|+.++.++++++..    .+..+++++||.+...+..    
T Consensus        88 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----  163 (280)
T PLN02253         88 TVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL----  163 (280)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC----
Confidence                  68999999986432  1           1467888898888887764    2345788887765211110    


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-ccc-e----EEe------cccccCCCC
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-SYN-V----VVS------AEASVDAND  201 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~~~-i----~~~------~~~~~~~~~  201 (427)
                       ...     .|+..+ .+.+.+.+.+.    ..|+++..++||.+....... ... .    ...      ....... .
T Consensus       164 -~~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~  235 (280)
T PLN02253        164 -GPH-----AYTGSK-HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLK-G  235 (280)
T ss_pred             -CCc-----ccHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCc-C
Confidence             111     222222 23455555443    458999999999554321100 000 0    000      0000000 1


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..++.+|+|++++.+++.... ..|..+.+.++.
T Consensus       236 ~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        236 VELTVDDVANAVLFLASDEARYISGLNLMIDGGF  269 (280)
T ss_pred             CCCCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence            247899999999998875322 357888887774

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.61  E-value=3.2e-14  Score=134.15  Aligned_cols=209  Identities=17%  Similarity=0.148  Sum_probs=129.5

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC----
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN----   81 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g----   81 (427)
                      |+|||++|++|+++++.|+++|++|++++|+.. ....+......       ...++.++.+|++|.+++.+++.+    
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~   73 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-------YGVKALGVVCDVSDREDVKAVVEEIEEE   73 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999998763 22222211110       012356899999999988887653    


Q ss_pred             ---cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCCCcc
Q 044905           82 ---AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        82 ---~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                         +|+|||++|.....+           .+.+|+.+..++++++..    .+.++|+++||.+...+..     +... 
T Consensus        74 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~-----~~~~-  147 (239)
T TIGR01830        74 LGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA-----GQAN-  147 (239)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC-----CCch-
Confidence               699999999754321           345777788888888765    4567999998865322211     1111 


Q ss_pred             chhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          144 FNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                          |+..+ .+.+.+.+.+    ...|+.+++++||.+........................+.+.+|+|+++..++..
T Consensus       148 ----y~~~k-~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~  222 (239)
T TIGR01830       148 ----YAASK-AGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASD  222 (239)
T ss_pred             ----hHHHH-HHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCc
Confidence                22111 1233333333    34689999999996543211110000000000000011367899999999888854


Q ss_pred             cc-cccCcEEEEecC
Q 044905          220 TA-VAENKVVKVFTD  233 (427)
Q Consensus       220 ~~-~~~g~~~nI~~~  233 (427)
                      .. ...+++|++.++
T Consensus       223 ~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       223 EASYITGQVIHVDGG  237 (239)
T ss_pred             ccCCcCCCEEEeCCC
Confidence            32 246788998665

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.61  E-value=6.9e-14  Score=134.34  Aligned_cols=187  Identities=15%  Similarity=0.166  Sum_probs=125.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      +++|+||||||+||+++++.|+++|++|++++|+...+..+......        ..++.++.+|++|.+++.++++.  
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~i~~~~~~~~   73 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK--------AARVSVYAADVRDADALAAAAADFI   73 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc--------CCeeEEEEcCCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999999997665444321110        11567899999999999887653  


Q ss_pred             -----cCEEEEccCCCCCCC------------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           82 -----AGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        82 -----~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           +|++||++|......            .+++|+.++.++++    ++++.+..+||++||.....+.     ...
T Consensus        74 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~-----~~~  148 (257)
T PRK07024         74 AAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL-----PGA  148 (257)
T ss_pred             HhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----CCC
Confidence                 699999998643211            34577778777665    5566677899999887532111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      .     .|+.++ .+.+.+.+.+    ...|++++.++||.+.....   ...       .......++.+++|+.++.+
T Consensus       149 ~-----~Y~asK-~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~---~~~-------~~~~~~~~~~~~~a~~~~~~  212 (257)
T PRK07024        149 G-----AYSASK-AAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMT---AHN-------PYPMPFLMDADRFAARAARA  212 (257)
T ss_pred             c-----chHHHH-HHHHHHHHHHHHHhhccCcEEEEEecCCCcCchh---hcC-------CCCCCCccCHHHHHHHHHHH
Confidence            1     222222 2344444443    35789999999997654211   000       00101246899999999998


Q ss_pred             hcC
Q 044905          217 FSN  219 (427)
Q Consensus       217 l~~  219 (427)
                      +.+
T Consensus       213 l~~  215 (257)
T PRK07024        213 IAR  215 (257)
T ss_pred             HhC
Confidence            864

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.60  E-value=3.7e-14  Score=135.73  Aligned_cols=212  Identities=15%  Similarity=0.093  Sum_probs=133.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||++|++.|+++|++|+++.|++...+.+......       ...++..+.+|++|.+++..++. 
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   75 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-------LGRRALAVPTDITDEDQCANLVAL   75 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-------hCCceEEEecCCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999988655444322111       01345689999999998877663 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .+|+|||++|.... .+           .+++|+.+...+++++...   ..++||++||......     ..+
T Consensus        76 ~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-----~~~  150 (258)
T PRK07890         76 ALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-----QPK  150 (258)
T ss_pred             HHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC-----CCC
Confidence                  57999999986432 11           4567888888888888652   2358999987753211     111


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc-------eEEec------ccccCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN-------VVVSA------EASVDANDY  202 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~-------i~~~~------~~~~~~~~~  202 (427)
                      ...|.     ..+ ...+.+.+.+.    ..+++++.++||++..........       .....      ......  .
T Consensus       151 ~~~Y~-----~sK-~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  222 (258)
T PRK07890        151 YGAYK-----MAK-GALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLK--R  222 (258)
T ss_pred             cchhH-----HHH-HHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCcc--c
Confidence            12222     111 12444444443    468999999999654321100000       00000      001111  3


Q ss_pred             cccHHHHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          203 KVAKSQIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      +.+.+|+|+++..+++... ...|+.+.+.++
T Consensus       223 ~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        223 LPTDDEVASAVLFLASDLARAITGQTLDVNCG  254 (258)
T ss_pred             cCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence            6789999999998886432 235666666555

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.60  E-value=7.5e-14  Score=132.77  Aligned_cols=189  Identities=11%  Similarity=0.128  Sum_probs=126.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      |++|+||||||+||.++++.|+++|++|++++|+.+..+.+......      ....++.++.+|++|.+++.++++.  
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRA------RGAVAVSTHELDILDTASHAAFLDSLP   74 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHH------hcCCeEEEEecCCCChHHHHHHHHHHh
Confidence            57999999999999999999999999999999998765443221110      1124677999999999988877654  


Q ss_pred             --cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCCCccc
Q 044905           82 --AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        82 --~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                        +|+|||++|......           .+++|+.++.++++++..    .+.+++|++||..-..+.     .....  
T Consensus        75 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~--  147 (243)
T PRK07102         75 ALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR-----ASNYV--  147 (243)
T ss_pred             hcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC-----CCCcc--
Confidence              699999998643321           346778888888877653    567899999876521110     11111  


Q ss_pred             hhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          145 NNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                         |+..+ ...+.+.+.    +...|++++.++||++.....   ...     .  ..+...++.+|+|+.+++.+..
T Consensus       148 ---Y~~sK-~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~---~~~-----~--~~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        148 ---YGSAK-AALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMT---AGL-----K--LPGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             ---cHHHH-HHHHHHHHHHHHHhhccCcEEEEEecCcccChhh---hcc-----C--CCccccCCHHHHHHHHHHHHhC
Confidence               22221 123333333    346789999999996654311   110     0  0112367899999999998874

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.60  E-value=6.9e-14  Score=133.74  Aligned_cols=208  Identities=14%  Similarity=0.107  Sum_probs=133.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|+++.|+...........          ..++..+.+|++|.+++..++.  
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~   83 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLL----------GGNAKGLVCDVSDSQSVEAAVAAV   83 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhh----------CCceEEEEecCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999999875322111110          1234588999999998887765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.+..++++++..    .+.++||++||.+...+.     ...
T Consensus        84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~  158 (255)
T PRK06841         84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL-----ERH  158 (255)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC-----CCC
Confidence                 5799999999754322           456777888888888754    467799999887521111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce-E--EecccccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV-V--VSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i-~--~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..|.     ..+ .+.+.+.+.+    ...|+++..|+||++..........- .  ......+..  .+.+.+|+|+++
T Consensus       159 ~~Y~-----~sK-~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~  230 (255)
T PRK06841        159 VAYC-----ASK-AGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAG--RFAYPEEIAAAA  230 (255)
T ss_pred             chHH-----HHH-HHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            2222     111 1233333333    34689999999996654321100000 0  000011111  377999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+++.... ..|..+.+.++
T Consensus       231 ~~l~~~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        231 LFLASDAAAMITGENLVIDGG  251 (255)
T ss_pred             HHHcCccccCccCCEEEECCC
Confidence            999875433 35777777665

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.60  E-value=1.9e-14  Score=139.07  Aligned_cols=192  Identities=15%  Similarity=0.181  Sum_probs=124.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ++++|+||||||+||++|++.|+++|++|++++|++.....               ..++.++.+|++|.+++.++++. 
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------------~~~~~~~~~D~~d~~~~~~~~~~~   67 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------------IPGVELLELDVTDDASVQAAVDEV   67 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------------cCCCeeEEeecCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999998754321               12345899999999999888764 


Q ss_pred             ------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           82 ------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        82 ------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            +|+|||++|....+.           .+++|+.+..++++++    ++.+.++||++||...+...     ...
T Consensus        68 ~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~  142 (270)
T PRK06179         68 IARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA-----PYM  142 (270)
T ss_pred             HHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC-----CCc
Confidence                  699999999754322           3467777878777774    56788999999886522110     011


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc----ceEEecc-------cccCCCCCccc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY----NVVVSAE-------ASVDANDYKVA  205 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~----~i~~~~~-------~~~~~~~~~i~  205 (427)
                      .     .|+.++ ...+.+.+.+    ...|+++++++||++.........    .+.....       .....-....+
T Consensus       143 ~-----~Y~~sK-~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (270)
T PRK06179        143 A-----LYAASK-HAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADA  216 (270)
T ss_pred             c-----HHHHHH-HHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCC
Confidence            1     222222 2244444433    357999999999855432111000    0000000       00000012467


Q ss_pred             HHHHHHHHHHHhcCc
Q 044905          206 KSQIASLVADVFSNT  220 (427)
Q Consensus       206 v~DVA~~v~~al~~~  220 (427)
                      .+|+|+.++.++..+
T Consensus       217 ~~~va~~~~~~~~~~  231 (270)
T PRK06179        217 PEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            899999999888643

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.60  E-value=2.8e-15  Score=145.64  Aligned_cols=218  Identities=15%  Similarity=0.159  Sum_probs=134.5

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccc----eEEEecCCCHHHHHHHhc-
Q 044905            7 VFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRL----NAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl----~vv~gDl~D~~sl~~al~-   80 (427)
                      ||||||+|.||+.||++|++.+ ..+++++|+..++-.+......     ....+++    ..+.+|++|.+.+..+|+ 
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~-----~~~~~~v~~~~~~vigDvrd~~~l~~~~~~   75 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRS-----RFPDPKVRFEIVPVIGDVRDKERLNRIFEE   75 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHH-----HC--TTCEEEEE--CTSCCHHHHHHHHTT-
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhh-----cccccCcccccCceeecccCHHHHHHHHhh
Confidence            7999999999999999999998 6899999999876555433210     0011223    246899999999999999 


Q ss_pred             -CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccc
Q 044905           81 -NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQ  152 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~  152 (427)
                       +.|+|||+|+.--.     .|  ....|+.|+.|++++|.++||++||++||==.        ..|     .+.++.++
T Consensus        76 ~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------v~P-----tnvmGatK  142 (293)
T PF02719_consen   76 YKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------VNP-----TNVMGATK  142 (293)
T ss_dssp             -T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------SS-------SHHHHHH
T ss_pred             cCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------CCC-----CcHHHHHH
Confidence             89999999985321     22  66889999999999999999999999984321        111     23455444


Q ss_pred             cccHHHHHHHHhcC----CCeEEEEeCC-CCCCC---CCCC------ccceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          153 PLTVPEFLQKVIET----DVSYTFIKTS-LTEDF---SPES------SYNVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       153 ~l~~E~~l~~l~~~----gl~~tilRPG-~~~~~---~~~~------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                       ..+|.++......    +..++.+|-| .++..   .+-+      -.++.+..+.   ..-.++++++.++.++.+..
T Consensus       143 -rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~---mtRffmti~EAv~Lvl~a~~  218 (293)
T PF02719_consen  143 -RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPD---MTRFFMTIEEAVQLVLQAAA  218 (293)
T ss_dssp             -HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT----EEEEE-HHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCC---cEEEEecHHHHHHHHHHHHh
Confidence             4477777665532    4689999987 33321   1101      1122222211   11268899999999998875


Q ss_pred             CcccccCcEEEEecCCCCChhhHHHHHHHH
Q 044905          219 NTAVAENKVVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       219 ~~~~~~g~~~nI~~~~~~~~~s~~ell~~i  248 (427)
                      ..  ..|++|.+--++......+.+.+-.+
T Consensus       219 ~~--~~geifvl~mg~~v~I~dlA~~~i~~  246 (293)
T PF02719_consen  219 LA--KGGEIFVLDMGEPVKILDLAEAMIEL  246 (293)
T ss_dssp             H----TTEEEEE---TCEECCCHHHHHHHH
T ss_pred             hC--CCCcEEEecCCCCcCHHHHHHHHHhh
Confidence            32  25778877776755555555555444

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.60  E-value=6.9e-14  Score=134.42  Aligned_cols=198  Identities=14%  Similarity=0.165  Sum_probs=131.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |.+++++|||||+.||..+++.|.++|++|+.+.|+.+++.++....-+.      ..-.+.++.+|++|++++..... 
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~------~~v~v~vi~~DLs~~~~~~~l~~~   77 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK------TGVEVEVIPADLSDPEALERLEDE   77 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh------hCceEEEEECcCCChhHHHHHHHH
Confidence            56779999999999999999999999999999999999887775533221      01234589999999998888664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHH----HHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVI----QAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll----~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .+|++|+|||....++           ++++|..+...+-    .-+.+.|-.|||-|+|.+-+..      .+
T Consensus        78 l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p------~p  151 (265)
T COG0300          78 LKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIP------TP  151 (265)
T ss_pred             HHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCC------Cc
Confidence                  5899999999877654           4556665555443    3445567789999988762110      11


Q ss_pred             CCccchhhhhccc--ccc-HHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQ--PLT-VPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       140 ~~~~~~~~~~k~~--~l~-~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      ..    ..|+.++  -+. .+.+-..+..+|+.++.|.||.+....... ......   ....+..+++.+|+|+.....
T Consensus       152 ~~----avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-~~~~~~---~~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         152 YM----AVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-KGSDVY---LLSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             ch----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-cccccc---cccchhhccCHHHHHHHHHHH
Confidence            11    1222111  001 233334456789999999999654322211 001010   111123478999999999999


Q ss_pred             hcC
Q 044905          217 FSN  219 (427)
Q Consensus       217 l~~  219 (427)
                      +..
T Consensus       224 l~~  226 (265)
T COG0300         224 LEK  226 (265)
T ss_pred             Hhc
Confidence            874

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.59  E-value=7.1e-14  Score=133.84  Aligned_cols=214  Identities=14%  Similarity=0.106  Sum_probs=133.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||.++++.|+++|++|+++.|+....+.+......       ...++..+.+|++|.+++.++++  
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   80 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT-------SGGKVVPVCCDVSQHQQVTSMLDQV   80 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-------cCCeEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987765544332111       01345688999999998877664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .+|++||++|.....+           .+++|+.+...+++++..    .+ -.++|++||......   .....
T Consensus        81 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~---~~~~~  157 (253)
T PRK05867         81 TAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHII---NVPQQ  157 (253)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCC---CCCCC
Confidence                 6899999999754322           345777888888887743    22 246887776541100   00001


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEE-ecccccCCCCCcccHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVV-SAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ...     |+.++ .+.+.+.+.+    ...|+++..++||+++............ .....+..  .+...+|||++++
T Consensus       158 ~~~-----Y~asK-aal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--r~~~p~~va~~~~  229 (253)
T PRK05867        158 VSH-----YCASK-AAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLG--RLGRPEELAGLYL  229 (253)
T ss_pred             ccc-----hHHHH-HHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            112     22222 2244444433    3568999999999765432111000000 00011111  3678999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++.... ..|..+.+.++.
T Consensus       230 ~L~s~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        230 YLASEASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHcCcccCCcCCCeEEECCCc
Confidence            99875333 357777777663

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.59  E-value=5.1e-14  Score=145.42  Aligned_cols=226  Identities=11%  Similarity=0.116  Sum_probs=154.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+||||+|.||+.+|+++++.+ -+++.++|+..+...+.....+     .-...++..+.||+.|.+.+..++++
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~-----~~~~~~~~~~igdVrD~~~~~~~~~~  323 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELRE-----KFPELKLRFYIGDVRDRDRVERAMEG  323 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHh-----hCCCcceEEEecccccHHHHHHHHhc
Confidence            35799999999999999999999988 6899999998765443222111     00135667899999999999999998


Q ss_pred             --cCEEEEccCCCC-----CCC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccc
Q 044905           82 --AGKVVVTIGPTE-----DGP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQ  152 (427)
Q Consensus        82 --~d~Vi~~ag~~~-----~~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~  152 (427)
                        +|+|||+|+.-.     .+|  ....|+.|+.|+++||.++||++||++||==        ...|     .|.++.++
T Consensus       324 ~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------AV~P-----tNvmGaTK  390 (588)
T COG1086         324 HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------AVNP-----TNVMGATK  390 (588)
T ss_pred             CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------ccCC-----chHhhHHH
Confidence              999999998532     233  5688999999999999999999999998432        1112     23444444


Q ss_pred             cccHHHHHHHHhc--C--CCeEEEEeCC-CCCCCC---CCCccceEEecccccC---CCCCcccHHHHHHHHHHHhcCcc
Q 044905          153 PLTVPEFLQKVIE--T--DVSYTFIKTS-LTEDFS---PESSYNVVVSAEASVD---ANDYKVAKSQIASLVADVFSNTA  221 (427)
Q Consensus       153 ~l~~E~~l~~l~~--~--gl~~tilRPG-~~~~~~---~~~~~~i~~~~~~~~~---~~~~~i~v~DVA~~v~~al~~~~  221 (427)
                       ..+|.+...+.+  +  +-.++.+|-| .++..-   +-+...+.-+++.+..   .--.|+++.+.++.++.+.... 
T Consensus       391 -r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~-  468 (588)
T COG1086         391 -RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA-  468 (588)
T ss_pred             -HHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhc-
Confidence             447777766643  2  4789999987 444321   1011112223333311   1126889999999999887643 


Q ss_pred             cccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          222 VAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       222 ~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                       ..|.+|-+--++......+++-+-.++
T Consensus       469 -~gGeifvldMGepvkI~dLAk~mi~l~  495 (588)
T COG1086         469 -KGGEIFVLDMGEPVKIIDLAKAMIELA  495 (588)
T ss_pred             -CCCcEEEEcCCCCeEHHHHHHHHHHHh
Confidence             367888887777444444444444443

>PRK08017 oxidoreductase; Provisional

Probab=99.59  E-value=7.4e-14  Score=133.46  Aligned_cols=192  Identities=13%  Similarity=0.221  Sum_probs=122.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +++|+||||||+||.++++.|+++|++|+++.|+.++.+.+...+             +..+.+|++|.+++.+++.   
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~i~   68 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLG-------------FTGILLDLDDPESVERAADEVI   68 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCC-------------CeEEEeecCCHHHHHHHHHHHH
Confidence            358999999999999999999999999999999987655443322             3478999999888766553   


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           .+|.+||++|.....+           .++.|+.++.++    ++++++.+.+++|++||.....+.     ...
T Consensus        69 ~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~  143 (256)
T PRK08017         69 ALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-----PGR  143 (256)
T ss_pred             HhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC-----CCc
Confidence                 4689999998643222           345555555554    677777788899999876421110     111


Q ss_pred             CccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCC-CCCCCCccceEEecc--cccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTE-DFSPESSYNVVVSAE--ASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~-~~~~~~~~~i~~~~~--~~~~~~~~~i~v~DVA~~v  213 (427)
                      .     .|+..+ ...+.+.+.    +...++++++++||.+. ++... .........  ........+++.+|+++.+
T Consensus       144 ~-----~Y~~sK-~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        144 G-----AYAASK-YALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDN-VNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             c-----HHHHHH-HHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhc-ccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            2     222222 234544443    23578999999998543 22110 000000000  0000111368999999999


Q ss_pred             HHHhcCc
Q 044905          214 ADVFSNT  220 (427)
Q Consensus       214 ~~al~~~  220 (427)
                      ..++.+.
T Consensus       217 ~~~~~~~  223 (256)
T PRK08017        217 RHALESP  223 (256)
T ss_pred             HHHHhCC
Confidence            9998754

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.3e-13  Score=133.04  Aligned_cols=215  Identities=18%  Similarity=0.140  Sum_probs=135.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||+|+||.+++++|+++|++|++++|+++....+......       ...++.++.+|++|.+++.+++. 
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~   80 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-------AGRRAHVVAADLAHPEATAGLAGQ   80 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            3567999999999999999999999999999999997665444322110       02345688999999999887665 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH-----cCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL-----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~-----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|......           .+.+|+.++.++++++..     .+.+++|++||..-..+     ..
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----~~  155 (263)
T PRK07814         81 AVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-----GR  155 (263)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-----CC
Confidence                  6799999998643221           456788889999998864     45678999987642111     11


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCcc-ceEEecc-cccCCCCCcccHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSY-NVVVSAE-ASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~-~i~~~~~-~~~~~~~~~i~v~DVA~~v  213 (427)
                      +...     |+..+ .+.+.+.+.+.   ..+++++.++||.+......... .-..... ..........+.+|+|+++
T Consensus       156 ~~~~-----Y~~sK-~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  229 (263)
T PRK07814        156 GFAA-----YGTAK-AALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAA  229 (263)
T ss_pred             CCch-----hHHHH-HHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            1222     22222 22444444443   23588999999955321110000 0000000 0000111246889999999


Q ss_pred             HHHhcCcc-cccCcEEEEecCC
Q 044905          214 ADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      +.+++... ...+..+.+.++.
T Consensus       230 ~~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        230 VYLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             HHHcCccccCcCCCEEEECCCc
Confidence            99887532 2467777776654

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.59  E-value=1.6e-13  Score=131.86  Aligned_cols=214  Identities=17%  Similarity=0.132  Sum_probs=135.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|+++.|+....+.+......     .....++.++.+|++|.+++..+++ 
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIAR-----DVAGARVLAVPADVTDAASVAAAVAA   79 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----ccCCceEEEEEccCCCHHHHHHHHHH
Confidence            4467899999999999999999999999999999987765444322111     0012345689999999988887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .+|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||......     ..+
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~  154 (260)
T PRK07063         80 AEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-----IPG  154 (260)
T ss_pred             HHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC-----CCC
Confidence                  6899999999653321           35677788888877764    345678999988752211     111


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--------ccccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--------EASVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--------~~~~~~~~~~i~v~  207 (427)
                      ...     |+..+ .+.+.+.+.+    ...|+++..|+||++..........-....        ...+..  .+...+
T Consensus       155 ~~~-----Y~~sK-aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~~~  226 (260)
T PRK07063        155 CFP-----YPVAK-HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMK--RIGRPE  226 (260)
T ss_pred             chH-----HHHHH-HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCC--CCCCHH
Confidence            111     22221 2234444433    356899999999976542211000000000        001111  256899


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |+|.+++.++.+... ..|..+.+.++
T Consensus       227 ~va~~~~fl~s~~~~~itG~~i~vdgg  253 (260)
T PRK07063        227 EVAMTAVFLASDEAPFINATCITIDGG  253 (260)
T ss_pred             HHHHHHHHHcCccccccCCcEEEECCC
Confidence            999999999875433 35677777655

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.59  E-value=1.4e-13  Score=132.29  Aligned_cols=211  Identities=13%  Similarity=0.137  Sum_probs=133.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||.+++++|++.|++|+++.|+ ...+.+......       ...++.++.+|++|.+++..+++ 
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~i~~~~~~   84 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-------EGRKVTFVQVDLTKPESAEKVVKE   84 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHHH
Confidence            346789999999999999999999999999999998 433333222111       02356789999999998888776 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.+...+++++.    ..+..++|++||...+.+..     .
T Consensus        85 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----~  159 (258)
T PRK06935         85 ALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK-----F  159 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----C
Confidence                  5799999998754321           34567777666665553    45667899998876422211     1


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE-E-ec--ccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV-V-SA--EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~-~-~~--~~~~~~~~~~i~v~DVA~  211 (427)
                      .+.|     ...+ .+.+.+.+.+.    ..|++++.|+||.+............ . ..  ...+..  .+...+|+|.
T Consensus       160 ~~~Y-----~asK-~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~  231 (258)
T PRK06935        160 VPAY-----TASK-HGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAG--RWGEPDDLMG  231 (258)
T ss_pred             chhh-----HHHH-HHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCC--CCCCHHHHHH
Confidence            1222     2221 22444444433    56899999999966542211000000 0 00  001111  3678899999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++..++.+... ..|.++.+.++
T Consensus       232 ~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        232 AAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             HHHHHcChhhcCCCCCEEEECCC
Confidence            99998875433 36777777665

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.59  E-value=1.3e-13  Score=131.90  Aligned_cols=212  Identities=13%  Similarity=0.088  Sum_probs=134.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|+++.|+..+...+......       ...++.++.+|++|.+++..++. 
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   79 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ-------EGIKAHAAPFNVTHKQEVEAAIEH   79 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-------cCCeEEEEecCCCCHHHHHHHHHH
Confidence            3567899999999999999999999999999999997665444322111       01244578899999998887764 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            +.|+|||++|.....+           .+++|+.+...+++++..    .+..+||++||.....+     ..+
T Consensus        80 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----~~~  154 (254)
T PRK08085         80 IEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----RDT  154 (254)
T ss_pred             HHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----CCC
Confidence                  4799999998654322           456777777777776654    45678999987652111     111


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc--eEEec--ccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN--VVVSA--EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~--i~~~~--~~~~~~~~~~i~v~DVA~  211 (427)
                      ...|.     ..+ .+.+.+.+.+    ...|+++..|+||++..........  .....  ...+..  .+.+.+|||+
T Consensus       155 ~~~Y~-----~sK-~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~va~  226 (254)
T PRK08085        155 ITPYA-----ASK-GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAA--RWGDPQELIG  226 (254)
T ss_pred             CcchH-----HHH-HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCC--CCcCHHHHHH
Confidence            22222     211 2244444444    3568999999999665432110000  00000  011111  3678999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++..++..... ..|..+.+.++
T Consensus       227 ~~~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        227 AAVFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             HHHHHhCccccCCcCCEEEECCC
Confidence            99988875333 35666666555

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.58  E-value=1.3e-13  Score=131.99  Aligned_cols=212  Identities=15%  Similarity=0.111  Sum_probs=134.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||+|+||+++++.|+++|++|+++.|+.+....+......       ...++.++.+|++|.+++.++++ 
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   81 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-------AGGAAEALAFDIADEEAVAAAFAR   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHH
Confidence            4568999999999999999999999999999999997654443321111       12245689999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ..|+|||++|....++           .+.+|+.++.++++++.    ..+.++||++||.....+.     ..
T Consensus        82 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~  156 (256)
T PRK06124         82 IDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR-----AG  156 (256)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-----CC
Confidence                  4699999999754322           34567777777775554    4677899999877532111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-cceEE-e--cccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-YNVVV-S--AEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-~~i~~-~--~~~~~~~~~~~i~v~DVA~  211 (427)
                      ...|....      .+.+.+.+.+    ...++++..|+||.++....... ..-.. .  .......  .+++.+|++.
T Consensus       157 ~~~Y~~sK------~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~  228 (256)
T PRK06124        157 DAVYPAAK------QGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLG--RWGRPEEIAG  228 (256)
T ss_pred             ccHhHHHH------HHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCC--CCCCHHHHHH
Confidence            12222111      1233333333    24589999999996654321100 00000 0  0001111  3789999999


Q ss_pred             HHHHHhcCcccc-cCcEEEEecC
Q 044905          212 LVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      +++.++++...+ .|..+.+.++
T Consensus       229 ~~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        229 AAVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             HHHHHcCcccCCcCCCEEEECCC
Confidence            999999764333 4666666554

>PRK06194 hypothetical protein; Provisional

Probab=99.58  E-value=1e-13  Score=135.04  Aligned_cols=162  Identities=11%  Similarity=0.091  Sum_probs=109.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.+++||||||+|+||+++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++.++++ 
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~~~~~~~~   76 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA-------QGAEVLGVRTDVSDAAQVEALADA   76 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999987654443222111       01245679999999999988776 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCC------CeEEEEeccccccccc
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGV------GHVAIIYDGNTTAAST  133 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gV------k~~V~vSSs~v~~~~~  133 (427)
                            ++|+|||++|....++           .+++|+.++.+++++    +.+.+.      .++|++||.+.+.+. 
T Consensus        77 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-  155 (287)
T PRK06194         77 ALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-  155 (287)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-
Confidence                  4799999999765322           356888888887776    444443      589998887643221 


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCC
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDF  181 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~  181 (427)
                          .+..     .|+..+ ...+.+.+.+.      ..++++..+.||++...
T Consensus       156 ----~~~~-----~Y~~sK-~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~  199 (287)
T PRK06194        156 ----PAMG-----IYNVSK-HAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG  199 (287)
T ss_pred             ----CCCc-----chHHHH-HHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence                1112     222222 23444444433      24578888999866543

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.58  E-value=2.4e-14  Score=127.24  Aligned_cols=190  Identities=18%  Similarity=0.164  Sum_probs=131.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ||.+|..+|.||||-+|+-+++++++++  ..|+++.|+...              ++.-.+++..+..|+...+.+...
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~--------------d~at~k~v~q~~vDf~Kl~~~a~~   80 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP--------------DPATDKVVAQVEVDFSKLSQLATN   80 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC--------------CccccceeeeEEechHHHHHHHhh
Confidence            5889999999999999999999999998  479999988421              111145667889999999999999


Q ss_pred             hcCcCEEEEccCCCCC----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccc
Q 044905           79 IGNAGKVVVTIGPTED----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l  154 (427)
                      ++|.|+.|++.|.+..    +-.+.++-+-.+.+.++|++.||++|+++||.+.  +.+       +. +  .|.+.+  
T Consensus        81 ~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA--d~s-------Sr-F--lY~k~K--  146 (238)
T KOG4039|consen   81 EQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA--DPS-------SR-F--LYMKMK--  146 (238)
T ss_pred             hcCCceEEEeecccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCC--Ccc-------cc-e--eeeecc--
Confidence            9999999999997764    2267888888889999999999999999998873  211       11 1  233332  


Q ss_pred             cHHHHHHHHhcCCCe-EEEEeCCCC-CCC----CCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          155 TVPEFLQKVIETDVS-YTFIKTSLT-EDF----SPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~-~tilRPG~~-~~~----~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                        -++++.+.+.+++ ++|+|||.+ .+.    ..+|..++........+...--.++--++.+++..+..+
T Consensus       147 --GEvE~~v~eL~F~~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~s~pv~~~~~amvn~~~~~  216 (238)
T KOG4039|consen  147 --GEVERDVIELDFKHIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLLSYPVYGDEVAMVNVLNTS  216 (238)
T ss_pred             --chhhhhhhhccccEEEEecCcceecccccccccchhhheehhhhhhHHHhccCCchhhhhHhHhhccccC
Confidence              3455677778886 999999943 221    122333443322222222212234455566666655444

>PRK12743 oxidoreductase; Provisional

Probab=99.58  E-value=1.1e-13  Score=132.75  Aligned_cols=211  Identities=18%  Similarity=0.126  Sum_probs=130.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++|+||||||+||.+++++|+++|++|+++.|+. .....+......       ...++.++.+|++|++++..+++  
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-------HGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHHH
Confidence            56899999999999999999999999999887644 333333222111       02345689999999988877664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .+|+|||++|......           .+.+|+.+..++++++...    + -++||++||....     ....+
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----~~~~~  149 (256)
T PRK12743         75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----TPLPG  149 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----CCCCC
Confidence                 5799999998754321           4567888888888877543    2 3589999876521     11111


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccc-eEE-ecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYN-VVV-SAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~-i~~-~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ...|....      .+.+.+.+.    +...|++++.|+||++.......... ... .....+..  ...+.+|+|.++
T Consensus       150 ~~~Y~~sK------~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~  221 (256)
T PRK12743        150 ASAYTAAK------HALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLG--RPGDTHEIASLV  221 (256)
T ss_pred             cchhHHHH------HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCC--CCCCHHHHHHHH
Confidence            22222211      123333333    33568999999999665422110000 000 00011111  256889999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..++..... ..|..+.+.++.
T Consensus       222 ~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        222 AWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             HHHhCccccCcCCcEEEECCCc
Confidence            988864322 357777777664

>PRK06128 oxidoreductase; Provisional

Probab=99.58  E-value=1.4e-13  Score=135.73  Aligned_cols=213  Identities=13%  Similarity=0.072  Sum_probs=134.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++|+||||+|+||+++++.|+++|++|++..|+.+.  ...+......       ...++.++.+|++|.+++.+++
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~  125 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-------EGRKAVALPGDLKDEAFCRQLV  125 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-------cCCeEEEEecCCCCHHHHHHHH
Confidence            345789999999999999999999999999888776532  2222111100       0124568899999998887766


Q ss_pred             c-------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCC
Q 044905           80 G-------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                      +       ++|+|||++|.... .+           .+++|+.++.++++++...  .-.+||++||...+....     
T Consensus       126 ~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  200 (300)
T PRK06128        126 ERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP-----  200 (300)
T ss_pred             HHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----
Confidence            4       68999999996421 11           5678888999999998753  225899998876432211     


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc--c-ceE-EecccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS--Y-NVV-VSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~--~-~i~-~~~~~~~~~~~~~i~v~DVA  210 (427)
                      ...     .|+.++ .+.+.+.+.+.    ..|+++..|+||++........  . ... ......+..  .+.+.+|||
T Consensus       201 ~~~-----~Y~asK-~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva  272 (300)
T PRK06128        201 TLL-----DYASTK-AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMK--RPGQPVEMA  272 (300)
T ss_pred             Cch-----hHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCC--CCcCHHHHH
Confidence            111     122222 22444444443    4689999999996543221100  0 000 000111111  256899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++.+++.... ..|..|++.++.
T Consensus       273 ~~~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        273 PLYVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             HHHHHHhCccccCccCcEEeeCCCE
Confidence            999988875333 357888888774

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.3e-13  Score=131.03  Aligned_cols=209  Identities=11%  Similarity=0.079  Sum_probs=130.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      ++.++|+||||+|+||++|++.|+++|++|++++|+.+....+....          ..++.++.+|+.|.+++..++  
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   73 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----------GESALVIRADAGDVAAQKALAQA   73 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----------CCceEEEEecCCCHHHHHHHHHH
Confidence            45579999999999999999999999999999999876544432211          123457899999987766544  


Q ss_pred             -----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCC
Q 044905           80 -----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 -----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           .++|+|||++|.....+           .+++|+.++.++++++...  ...++|+++|++...+.     ....
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~-----~~~~  148 (249)
T PRK06500         74 LAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM-----PNSS  148 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-----CCcc
Confidence                 36899999998654321           4568888999999999742  23467777765421111     1111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc--cceEEec------ccccCCCCCcccHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS--YNVVVSA------EASVDANDYKVAKSQI  209 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~--~~i~~~~------~~~~~~~~~~i~v~DV  209 (427)
                           .|+..+ .+.+.+.+.+.    ..|+++.+++||.+........  .......      ...+..  -+.+.+|+
T Consensus       149 -----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v  220 (249)
T PRK06500        149 -----VYAASK-AALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG--RFGTPEEI  220 (249)
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC--CCcCHHHH
Confidence                 232222 23455554433    4689999999996543211000  0000000      000111  25689999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |+++..++.+... ..|..+.+.++
T Consensus       221 a~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        221 AKAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             HHHHHHHcCccccCccCCeEEECCC
Confidence            9999998875332 24666666555

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.58  E-value=2e-13  Score=129.95  Aligned_cols=212  Identities=14%  Similarity=0.089  Sum_probs=132.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||+|+||.+++++|+++|++|+++.|+..  ..+......       ...++.++.+|++|.+++..+++ 
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   73 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-------LGRRFLSLTADLSDIEAIKALVDS   73 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHH
Confidence            45689999999999999999999999999999998752  122111111       01345689999999998886664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|.....+           .+++|+.+..++++++..    .+ ..++|++||...+....     
T Consensus        74 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----  148 (248)
T TIGR01832        74 AVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----  148 (248)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----
Confidence                  5899999998754221           356788888888887753    33 46899998876432111     


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccce-EE-ecccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNV-VV-SAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i-~~-~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      ..+.|.     ..+ .+.+.+.+.+.    ..|++++.++||++..........- .. ...........+++.+|+|++
T Consensus       149 ~~~~Y~-----~sK-aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (248)
T TIGR01832       149 RVPSYT-----ASK-HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGP  222 (248)
T ss_pred             CCchhH-----HHH-HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            112222     111 22444444443    4589999999996644321100000 00 000000011147899999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecC
Q 044905          213 VADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++.+++.... ..|.++.+.++
T Consensus       223 ~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       223 AVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             HHHHcCccccCcCCcEEEeCCC
Confidence            9999875433 24666666544

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.1e-13  Score=136.65  Aligned_cols=197  Identities=14%  Similarity=0.157  Sum_probs=126.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      ..++|+||||||+||+++++.|+++|++|+++.|+.+.++++.......       ..++.++.+|++|.+++.+++   
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~-------g~~~~~~~~Dv~d~~~v~~~~~~~   78 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL-------GAEVLVVPTDVTDADQVKALATQA   78 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeeCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987665543321110       123457899999999988876   


Q ss_pred             ----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           80 ----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          .++|++|||+|....++           .+++|+.++.++++++    ++.+..++|++||.+.+...     ...
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~-----p~~  153 (330)
T PRK06139         79 ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ-----PYA  153 (330)
T ss_pred             HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-----CCc
Confidence                46899999999654322           4567888888777665    44556688888876522111     011


Q ss_pred             CccchhhhhccccccHHHHHH----HHhc-CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIE-TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~-~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      ..     |+.+| .+...+.+    .+.. .++.++.+.||+++........+.  .+. ........++.+|+|+.++.
T Consensus       154 ~~-----Y~asK-aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~--~~~-~~~~~~~~~~pe~vA~~il~  224 (330)
T PRK06139        154 AA-----YSASK-FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY--TGR-RLTPPPPVYDPRRVAKAVVR  224 (330)
T ss_pred             hh-----HHHHH-HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc--ccc-cccCCCCCCCHHHHHHHHHH
Confidence            12     22222 12222333    3333 489999999997654321111111  111 11112246799999999999


Q ss_pred             HhcCc
Q 044905          216 VFSNT  220 (427)
Q Consensus       216 al~~~  220 (427)
                      ++.++
T Consensus       225 ~~~~~  229 (330)
T PRK06139        225 LADRP  229 (330)
T ss_pred             HHhCC
Confidence            98754

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.58  E-value=2.1e-13  Score=129.31  Aligned_cols=211  Identities=17%  Similarity=0.171  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.++|+||||+|+||+++++.|+++|++|+++.|+... ...+......       ...++.++.+|++|.+++.++++ 
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   76 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-------AGGRAIAVQADVADAAAVTRLFDA   76 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999888776542 2222221111       02356689999999999888876 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            ++|+|||++|.....+           .+.+|+.+..++++++...  ...++|++||.+.....     .+..
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~  151 (245)
T PRK12937         77 AETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL-----PGYG  151 (245)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-----CCCc
Confidence                  5899999999654221           3567888888888887654  23589999876532111     1111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCC-CCccceEEec--ccccCCCCCcccHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSP-ESSYNVVVSA--EASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~-~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v~  214 (427)
                           .|+..+ ...+.+.+.+.    ..++.++.++||++..... ..........  ...+..  .+.+.+|+|+.+.
T Consensus       152 -----~Y~~sK-~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~a~~~~  223 (245)
T PRK12937        152 -----PYAASK-AAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLE--RLGTPEEIAAAVA  223 (245)
T ss_pred             -----hhHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCC--CCCCHHHHHHHHH
Confidence                 222222 23445554432    4589999999996543211 0000000000  001111  3568999999999


Q ss_pred             HHhcCccc-ccCcEEEEecC
Q 044905          215 DVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+++.+.. ..|..+++.++
T Consensus       224 ~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        224 FLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             HHcCccccCccccEEEeCCC
Confidence            88875433 35777777654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.58  E-value=3.4e-13  Score=130.11  Aligned_cols=215  Identities=10%  Similarity=0.066  Sum_probs=134.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++++||||+|+||.+|+++|+++|++|+++.|+..+...+......       ...++.++.+|++|.+++.+++. 
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   80 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE-------LGIEAHGYVCDVTDEDGVQAMVSQ   80 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999987765444322111       01245689999999999888774 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ..|++||++|.....+           .+.+|+.+...+++++.    +.+..+||++||.....+     ..+
T Consensus        81 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~  155 (265)
T PRK07097         81 IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELG-----RET  155 (265)
T ss_pred             HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCC-----CCC
Confidence                  4799999999754322           34567777776666553    456778999987652111     111


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEeccc--------ccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEA--------SVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~--------~~~~~~~~i~v~  207 (427)
                      ...|..     .+ .+.+.+.+.+    ...|+.++.|+||.+..............+..        .......+...+
T Consensus       156 ~~~Y~~-----sK-aal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (265)
T PRK07097        156 VSAYAA-----AK-GGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPE  229 (265)
T ss_pred             CccHHH-----HH-HHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHH
Confidence            122221     11 1233444433    35689999999996543211100100000000        000011366889


Q ss_pred             HHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      |+|..+..++.... ...|..+.+.++.
T Consensus       230 dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        230 DLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             HHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            99999999987542 3467777776663

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.57  E-value=7.9e-14  Score=133.68  Aligned_cols=213  Identities=13%  Similarity=0.050  Sum_probs=132.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||++++++|+++|+.|++++|+.++. .+......       ...++.++.+|++|.+++..++. 
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   76 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA-------LQPRAEFVQVDLTDDAQCRDAVEQ   76 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHH
Confidence            4557999999999999999999999999999999988754 22111110       02346789999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            ++|+|||++|......          .+++|+.+..++++++..   .+..+|+++||.....+.     .+..
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~~~~  151 (258)
T PRK08628         77 TVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ-----GGTS  151 (258)
T ss_pred             HHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-----CCCc
Confidence                  5799999999543211          345667777777777643   234689999876532111     1111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCC-CCCccceEEecc------cccCCCCCcccHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFS-PESSYNVVVSAE------ASVDANDYKVAKSQIA  210 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~-~~~~~~i~~~~~------~~~~~~~~~i~v~DVA  210 (427)
                           .|+.++ ...+.+.+.+.    ..+++++.|+||.+.... ..+...+.....      .....+..+++.+|+|
T Consensus       152 -----~Y~~sK-~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  225 (258)
T PRK08628        152 -----GYAAAK-GAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIA  225 (258)
T ss_pred             -----hhHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHH
Confidence                 222222 23444444443    568999999998554321 100000000000      0000111368899999


Q ss_pred             HHHHHHhcCcc-cccCcEEEEecC
Q 044905          211 SLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      ++++.++.... ...|..+.+.++
T Consensus       226 ~~~~~l~~~~~~~~~g~~~~~~gg  249 (258)
T PRK08628        226 DTAVFLLSERSSHTTGQWLFVDGG  249 (258)
T ss_pred             HHHHHHhChhhccccCceEEecCC
Confidence            99999887542 235677777655

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.57  E-value=1.8e-13  Score=132.63  Aligned_cols=152  Identities=15%  Similarity=0.167  Sum_probs=105.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      |++|+||||||++|+++++.|+++|++|++++|+......+...             ++.++.+|++|.+++.++++   
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------------~~~~~~~Dl~~~~~~~~~~~~~~   67 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-------------GFTAVQLDVNDGAALARLAEELE   67 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------------CCeEEEeeCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999997665544332             23478999999988877663   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                          ++|+|||++|....++           .+++|+.++.++++++..   .+..++|++||.....+.     .... 
T Consensus        68 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~-  141 (274)
T PRK05693         68 AEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT-----PFAG-  141 (274)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC-----CCcc-
Confidence                5799999999654322           356777888888887643   244678888775521110     1111 


Q ss_pred             cchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC
Q 044905          143 FFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE  179 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~  179 (427)
                          .|+..+ .+.+.+.+.+    ...|++++.++||.+.
T Consensus       142 ----~Y~~sK-~al~~~~~~l~~e~~~~gi~v~~v~pg~v~  177 (274)
T PRK05693        142 ----AYCASK-AAVHALSDALRLELAPFGVQVMEVQPGAIA  177 (274)
T ss_pred             ----HHHHHH-HHHHHHHHHHHHHhhhhCeEEEEEecCccc
Confidence                222222 2234444333    3468999999999654

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.57  E-value=1.8e-13  Score=129.40  Aligned_cols=210  Identities=19%  Similarity=0.175  Sum_probs=127.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      ++++||||||++|+++++.|+++|++|+++.| ++.....+......       ...++.++.+|++|.+++.++++   
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA-------LGFDFRVVEGDVSSFESCKAAVAKVE   73 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------hCCceEEEEecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999998 43333332221100       02356789999999988877664   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          .+|+|||++|......           ...+|+.++..+    +..++..+.++||++||.....+.     .+..
T Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~~~  148 (242)
T TIGR01829        74 AELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----FGQT  148 (242)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----CCcc
Confidence                4799999998653221           234566666654    444556678899999876521111     1111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .|.     ..+ ...+.+.+.+    ...+++++.++||.+..........-....  ...+..  .+...+|+++++..
T Consensus       149 ~y~-----~sk-~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~  220 (242)
T TIGR01829       149 NYS-----AAK-AGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVG--RLGRPEEIAAAVAF  220 (242)
T ss_pred             hhH-----HHH-HHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCC--CCcCHHHHHHHHHH
Confidence            121     111 1123333333    346899999999965432211100000000  001111  35678999999988


Q ss_pred             HhcCcc-cccCcEEEEecCC
Q 044905          216 VFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~-~~~g~~~nI~~~~  234 (427)
                      ++.+.. ...|+.+.+.++.
T Consensus       221 l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       221 LASEEAGYITGATLSINGGL  240 (242)
T ss_pred             HcCchhcCccCCEEEecCCc
Confidence            876532 2468888887763

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.57  E-value=1.9e-13  Score=131.11  Aligned_cols=213  Identities=15%  Similarity=0.120  Sum_probs=137.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+....+.+......       ...++.++.+|++|.+++.++++ 
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~i~~~~~~   81 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-------LGGQAFACRCDITSEQELSALADF   81 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            4568999999999999999999999999999999987655443222111       01245678999999998877654 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            +.|++||++|.....+          .+++|+.+..++++++.    +.+..++|++||.+...+.     .+.
T Consensus        82 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~  156 (255)
T PRK06113         82 ALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----INM  156 (255)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCC-----CCc
Confidence                  4799999998653221          35678888888888875    3445689999887632111     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc--ceEEe-cccccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY--NVVVS-AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~--~i~~~-~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     |+..+ .+.+.+.+.+.    ..|+++.++.||++.........  ..... ....+..  .+.+.+|+++++
T Consensus       157 ~~-----Y~~sK-~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~a~~~  228 (255)
T PRK06113        157 TS-----YASSK-AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR--RLGQPQDIANAA  228 (255)
T ss_pred             ch-----hHHHH-HHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            11     22222 23445554443    46799999999966542111000  00000 0001111  256899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..+++.... ..|..+++.++.
T Consensus       229 ~~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        229 LFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             HHHcCccccCccCCEEEECCCc
Confidence            998874322 368888888874

>PRK12742 oxidoreductase; Provisional

Probab=99.57  E-value=2.3e-13  Score=128.57  Aligned_cols=208  Identities=13%  Similarity=0.149  Sum_probs=128.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++.++|+||||+|+||+++++.|+++|++|+++.|+ ....+++...            .+..++.+|++|.+++.+++.
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~------------~~~~~~~~D~~~~~~~~~~~~   71 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE------------TGATAVQTDSADRDAVIDVVR   71 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH------------hCCeEEecCCCCHHHHHHHHH
Confidence            456799999999999999999999999999887664 3333333221            012478899999988877664


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCccc
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                         ..|++||++|....+.           .+++|+.+..+++..+...  ...++|++||....    .....+..   
T Consensus        72 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~----~~~~~~~~---  144 (237)
T PRK12742         72 KSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGD----RMPVAGMA---  144 (237)
T ss_pred             HhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccc----cCCCCCCc---
Confidence               4899999998653221           4567777887777655543  34689999876521    00111112   


Q ss_pred             hhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE-EecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          145 NNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV-VSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~-~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                        .|+..+ .+.+.+.+.+.    ..|++++.|+||+++........... ......+..  .+.+.+|+|+++..++++
T Consensus       145 --~Y~~sK-aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~p~~~a~~~~~l~s~  219 (237)
T PRK12742        145 --AYAASK-SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHSFMAIK--RHGRPEEVAGMVAWLAGP  219 (237)
T ss_pred             --chHHhH-HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccHHHHHHHhcCCCC--CCCCHHHHHHHHHHHcCc
Confidence              222222 23454444433    56899999999976543211110000 000001111  357899999999998875


Q ss_pred             ccc-ccCcEEEEecC
Q 044905          220 TAV-AENKVVKVFTD  233 (427)
Q Consensus       220 ~~~-~~g~~~nI~~~  233 (427)
                      ... ..|..+.+-++
T Consensus       220 ~~~~~~G~~~~~dgg  234 (237)
T PRK12742        220 EASFVTGAMHTIDGA  234 (237)
T ss_pred             ccCcccCCEEEeCCC
Confidence            433 35666666554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.57  E-value=1.4e-13  Score=132.06  Aligned_cols=213  Identities=13%  Similarity=0.070  Sum_probs=132.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||+|+||.+++++|+++|++|++++|+......+......     .....++.++.+|++|.+++..++.   
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~i~~~~~~~~   76 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINA-----EYGEGMAYGFGADATSEQSVLALSRGVD   76 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----hcCCceeEEEEccCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987655444321110     0001346789999999988877664   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          ..|+|||++|.....+           .+++|+.++.++++++..    .+ -.++|++||.....+.     ...
T Consensus        77 ~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-----~~~  151 (259)
T PRK12384         77 EIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS-----KHN  151 (259)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC-----CCC
Confidence                5799999998654321           346777787766666643    45 3588988876421110     011


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCC-CCCCCCCCccc-----eEEe--------cccccCCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSL-TEDFSPESSYN-----VVVS--------AEASVDANDY  202 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~-~~~~~~~~~~~-----i~~~--------~~~~~~~~~~  202 (427)
                      .     .|+.++ .+.+.+.+.+    ...|+++..+|||. +.........+     ....        ....+..  .
T Consensus       152 ~-----~Y~~sK-aa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  223 (259)
T PRK12384        152 S-----GYSAAK-FGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLK--R  223 (259)
T ss_pred             c-----hhHHHH-HHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCccc--C
Confidence            1     222222 2233333333    35789999999984 33211100000     0000        0011111  4


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+||++++..++.+... ..|.+|++.++.
T Consensus       224 ~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        224 GCDYQDVLNMLLFYASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence            78999999999988865432 357889998874

>PRK05717 oxidoreductase; Validated

Probab=99.57  E-value=1.9e-13  Score=131.04  Aligned_cols=208  Identities=11%  Similarity=0.122  Sum_probs=132.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++|+||||+|+||+++++.|+++|++|+++.|+..+...+....          ..++.++.+|++|.+++.+++.  
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----------GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----------CCceEEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999998876544332210          1234589999999988766553  


Q ss_pred             -----CcCEEEEccCCCCCC-------------CCccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDG-------------PTSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~-------------~~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .+|+|||++|.....             ..+++|+.++.++++++..   ....++|++||.....+.     ..
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~-----~~  153 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE-----PD  153 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-----CC
Confidence                 479999999965321             1456888899999999863   223678888877532211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCcc--ceEEec-ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSY--NVVVSA-EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~--~i~~~~-~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+..+ .+.+.+.+.+.   ..++++..++||.+.........  ...... ......  ...+.+|+|.++
T Consensus       154 ~~-----~Y~~sK-aa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~  225 (255)
T PRK05717        154 TE-----AYAASK-GGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAG--RVGTVEDVAAMV  225 (255)
T ss_pred             Cc-----chHHHH-HHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCC--CCcCHHHHHHHH
Confidence            11     232222 23455555543   23589999999966542221100  000000 011111  367899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ..+++.... ..|..+.+.++
T Consensus       226 ~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        226 AWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             HHHcCchhcCccCcEEEECCC
Confidence            988864322 35677777555

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.57  E-value=3.2e-13  Score=128.55  Aligned_cols=190  Identities=13%  Similarity=0.175  Sum_probs=126.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +++++||||||+||++++++|+++|++|++++|++...+.+......     .....++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLA-----RYPGIKVAVAALDVNDHDQVFEVFAEFR   76 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----hCCCceEEEEEcCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998765544332111     0012356689999999988876654   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|++||++|......           .+++|+.+..++++++.    +.+.++||++||.+...+..    .+..
T Consensus        77 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----~~~~  152 (248)
T PRK08251         77 DELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLP----GVKA  152 (248)
T ss_pred             HHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCC----CCcc
Confidence                6899999998654321           34677778888877764    45778999998865322211    0111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHh
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                           .|+.++ .+.+.+.+.+.    ..+++++.++||++......   ..   +  .   ....++.+|.|+.+++++
T Consensus       153 -----~Y~~sK-~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~---~~---~--~---~~~~~~~~~~a~~i~~~~  215 (248)
T PRK08251        153 -----AYAASK-AGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA---KA---K--S---TPFMVDTETGVKALVKAI  215 (248)
T ss_pred             -----cHHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh---cc---c--c---CCccCCHHHHHHHHHHHH
Confidence                 222222 22333333333    46899999999977543211   00   0  0   113678999999999988


Q ss_pred             cC
Q 044905          218 SN  219 (427)
Q Consensus       218 ~~  219 (427)
                      ..
T Consensus       216 ~~  217 (248)
T PRK08251        216 EK  217 (248)
T ss_pred             hc
Confidence            74

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.4e-13  Score=131.06  Aligned_cols=209  Identities=15%  Similarity=0.110  Sum_probs=132.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|++++|+......+....          ..++.++.+|++|.+++.++++ 
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~~   73 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----------GERARFIATDITDDAAIERAVAT   73 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCeeEEEEecCCCHHHHHHHHHH
Confidence            44579999999999999999999999999999999976554443211          1245689999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            .+|++||++|......          .+++|+.++.++++++..   .+-.++|++||.+...+..     ...
T Consensus        74 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----~~~  148 (261)
T PRK08265         74 VVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----GRW  148 (261)
T ss_pred             HHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----CCc
Confidence                  5799999998643211          345677788878776653   3346899998765321111     111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc--e-E---EecccccCCCCCcccHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN--V-V---VSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~--i-~---~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      .|     ...+ .+.+.+.+.+    ...|+++..|+||++..........  . .   ......+..  .+...+|||+
T Consensus       149 ~Y-----~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva~  220 (261)
T PRK08265        149 LY-----PASK-AAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLG--RVGDPEEVAQ  220 (261)
T ss_pred             hh-----HHHH-HHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCC--CccCHHHHHH
Confidence            12     2221 1233333333    3568999999999654321100000  0 0   000001111  2457899999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++..+++.... ..|..+.+.++
T Consensus       221 ~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        221 VVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             HHHHHcCccccCccCcEEEECCC
Confidence            99999875332 35677777665

>PRK08264 short chain dehydrogenase; Validated

Probab=99.57  E-value=1.1e-13  Score=130.86  Aligned_cols=179  Identities=15%  Similarity=0.147  Sum_probs=123.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||||++|+++++.|+++|+ +|++++|+..+...   .           ..++.++.+|+.|.+++.+++. 
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~-----------~~~~~~~~~D~~~~~~~~~~~~~   70 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---L-----------GPRVVPLQLDVTDPASVAAAAEA   70 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---c-----------CCceEEEEecCCCHHHHHHHHHh
Confidence            456899999999999999999999998 99999998765432   1           1245689999999999888776 


Q ss_pred             --CcCEEEEccCC-CCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGP-TEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~-~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        .+|+|||++|. .....           ..++|+.++.++++++.    ..+.++||++||...+.+.     .+.. 
T Consensus        71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----~~~~-  144 (238)
T PRK08264         71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----PNLG-  144 (238)
T ss_pred             cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----CCch-
Confidence              47999999997 32211           34577788888888764    3567789999876632211     1111 


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                          .|+..+ ...+.+.+.+.    ..+++++++|||.++.....         ..    ....++.+|+++.++..+.
T Consensus       145 ----~y~~sK-~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~---------~~----~~~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        145 ----TYSASK-AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAA---------GL----DAPKASPADVARQILDALE  206 (238)
T ss_pred             ----HhHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccc---------cC----CcCCCCHHHHHHHHHHHHh
Confidence                222222 22444444433    45899999999976542110         00    0126788999999998876


Q ss_pred             C
Q 044905          219 N  219 (427)
Q Consensus       219 ~  219 (427)
                      .
T Consensus       207 ~  207 (238)
T PRK08264        207 A  207 (238)
T ss_pred             C
Confidence            3

>PRK08643 acetoin reductase; Validated

Probab=99.57  E-value=2.8e-13  Score=129.72  Aligned_cols=210  Identities=16%  Similarity=0.135  Sum_probs=129.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||+|+||.+|++.|+++|++|++++|+......+......       ...++.++.+|++|++++.+++.   
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~   74 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK-------DGGKAIAVKADVSDRDQVFAAVRQVV   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987655444322111       01245578999999998877665   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          ++|+|||++|.....+           .+++|+.++..+++++..    .+ ..++|++||.+...+.     .+.
T Consensus        75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~  149 (256)
T PRK08643         75 DTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-----PEL  149 (256)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-----CCC
Confidence                5799999998754322           345677777766666643    22 3578988877532111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-ceEE-ec-c----------cccCCCCCc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-NVVV-SA-E----------ASVDANDYK  203 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-~i~~-~~-~----------~~~~~~~~~  203 (427)
                      ..|.     ..+ ...+.+.+.+    ...|++++.|+||++......... .... .+ +          .....  .+
T Consensus       150 ~~Y~-----~sK-~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  221 (256)
T PRK08643        150 AVYS-----STK-FAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLG--RL  221 (256)
T ss_pred             chhH-----HHH-HHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCC--CC
Confidence            2222     211 1233333333    357899999999965432110000 0000 00 0          00111  25


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+.+|+|.++..++..... ..|..+.+-++
T Consensus       222 ~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg  252 (256)
T PRK08643        222 SEPEDVANCVSFLAGPDSDYITGQTIIVDGG  252 (256)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            6899999999998875332 45667766554

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.57  E-value=2.2e-13  Score=133.81  Aligned_cols=212  Identities=10%  Similarity=0.036  Sum_probs=135.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||.+|+++|+++|++|+++.|+... ...+......       ...++.++.+|++|.+++..+++ 
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~  117 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-------EGVKCLLIPGDVSDEAFCKDAVEE  117 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-------cCCeEEEEEccCCCHHHHHHHHHH
Confidence            35689999999999999999999999999999988643 2222111100       01345689999999998887764 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            .+|+|||++|.... ..           .+++|+.+..++++++...  ...+||++||.+.+.+..     ..
T Consensus       118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~-----~~  192 (290)
T PRK06701        118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE-----TL  192 (290)
T ss_pred             HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC-----Cc
Confidence                  57999999986422 11           4668888999999988653  235899998876432211     11


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc--c-eEEecccccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY--N-VVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~--~-i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..|     ..++ .+.+.+.+.+.    ..|++++.|+||.+.........  . +..........  .+.+.+|+|+++
T Consensus       193 ~~Y-----~~sK-~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~  264 (290)
T PRK06701        193 IDY-----SATK-GAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQ--RPGQPEELAPAY  264 (290)
T ss_pred             chh-----HHHH-HHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcC--CCcCHHHHHHHH
Confidence            112     2221 12344444433    45899999999965432211100  0 00000011111  378899999999


Q ss_pred             HHHhcCcc-cccCcEEEEecCC
Q 044905          214 ADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      ..++.+.. ...|..|++.++.
T Consensus       265 ~~ll~~~~~~~~G~~i~idgg~  286 (290)
T PRK06701        265 VFLASPDSSYITGQMLHVNGGV  286 (290)
T ss_pred             HHHcCcccCCccCcEEEeCCCc
Confidence            99987542 2467888887763

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.57  E-value=2.1e-13  Score=129.62  Aligned_cols=214  Identities=18%  Similarity=0.146  Sum_probs=127.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |..++++||||||+||+++++.|+++|++|+++.+. .............       ...++..+.+|++|.+++.++++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   73 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA-------LGFDFIASEGNVGDWDSTKAAFD   73 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHH
Confidence            456789999999999999999999999999886543 3222222111110       01234567899999988877664


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|+|||++|.....+           ..++|+.+..+++++    +...+.++||++||.....+.     .
T Consensus        74 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~  148 (246)
T PRK12938         74 KVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----F  148 (246)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-----C
Confidence                   5899999999754211           345666676665544    455677899999876521110     1


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +...     |...+ .+.+.+.+.    +...|++++.++||++.........+-...............+.+|+++++.
T Consensus       149 ~~~~-----y~~sK-~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  222 (246)
T PRK12938        149 GQTN-----YSTAK-AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVA  222 (246)
T ss_pred             CChh-----HHHHH-HHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHH
Confidence            1111     22221 123333333    3356899999999966543211100000000000011113568999999999


Q ss_pred             HHhcCcc-cccCcEEEEecC
Q 044905          215 DVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~-~~~g~~~nI~~~  233 (427)
                      .++++.. ...+..+.+.++
T Consensus       223 ~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        223 WLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             HHcCcccCCccCcEEEECCc
Confidence            8886532 246777777655

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.57  E-value=2.3e-13  Score=129.71  Aligned_cols=203  Identities=16%  Similarity=0.117  Sum_probs=130.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..++++||||+|++|+++++.|+++|++|+++.|+.     +...           ..++.++.+|++|.+++.++++.
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~   69 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQE-----------DYPFATFVLDVSDAAAVAQVCQR   69 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhc-----------CCceEEEEecCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999985     1110           12456899999999998887753


Q ss_pred             -------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           82 -------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        82 -------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             +|+|||++|....++           .+++|+.+..++++++.    +.+..+||++||.+....     ..+
T Consensus        70 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~~  144 (252)
T PRK08220         70 LLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----RIG  144 (252)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----CCC
Confidence                   799999999754322           35577778888887764    345568998887653111     111


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc------cceEEec------ccccCCCCCc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS------YNVVVSA------EASVDANDYK  203 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~------~~i~~~~------~~~~~~~~~~  203 (427)
                      ...|.     ..+ ...+.+.+.+.    ..++++++++||.+........      ......+      ...+.  ..+
T Consensus       145 ~~~Y~-----~sK-~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  216 (252)
T PRK08220        145 MAAYG-----ASK-AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL--GKI  216 (252)
T ss_pred             CchhH-----HHH-HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC--ccc
Confidence            12222     221 22444444443    4689999999995543211000      0000000      00111  147


Q ss_pred             ccHHHHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      ++++|+|++++.++.+.. ...+..+.+.++
T Consensus       217 ~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg  247 (252)
T PRK08220        217 ARPQEIANAVLFLASDLASHITLQDIVVDGG  247 (252)
T ss_pred             CCHHHHHHHHHHHhcchhcCccCcEEEECCC
Confidence            899999999999887532 235666666665

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.57  E-value=2.8e-13  Score=128.09  Aligned_cols=208  Identities=13%  Similarity=0.109  Sum_probs=126.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|++|.++++.|+++|++|++++|++...+.+......        ..++.++.+|++|.+++.++++  
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~~~~~~~~~   75 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK--------YGNIHYVVGDVSSTESARNVIEKA   75 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------cCCeEEEECCCCCHHHHHHHHHHH
Confidence            457999999999999999999999999999999998765544221111        1245689999999998877654  


Q ss_pred             -----CcCEEEEccCCCCCCC---------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCccc
Q 044905           81 -----NAGKVVVTIGPTEDGP---------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~---------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                           ++|.+||++|......         .++.|+.+...+++.+...  .-.++|++||.+....    .......  
T Consensus        76 ~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~----~~~~~~~--  149 (238)
T PRK05786         76 AKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK----ASPDQLS--  149 (238)
T ss_pred             HHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc----CCCCchH--
Confidence                 4699999998643221         2345555666666655442  1257888887642111    0111111  


Q ss_pred             hhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          145 NNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                         |..++ ...+.+.+    .+...|++++++|||++.+...+. ..  ... .. ..+...++.+|++++++.++..+
T Consensus       150 ---Y~~sK-~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~~--~~~-~~-~~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        150 ---YAVAK-AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-RN--WKK-LR-KLGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             ---HHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-hh--hhh-hc-cccCCCCCHHHHHHHHHHHhccc
Confidence               22222 12333333    333468999999999654422110 00  000 00 11113678999999999998754


Q ss_pred             cc-ccCcEEEEecC
Q 044905          221 AV-AENKVVKVFTD  233 (427)
Q Consensus       221 ~~-~~g~~~nI~~~  233 (427)
                      .. ..|..+.+.++
T Consensus       221 ~~~~~g~~~~~~~~  234 (238)
T PRK05786        221 ADWVDGVVIPVDGG  234 (238)
T ss_pred             ccCccCCEEEECCc
Confidence            32 35666666443

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.5e-13  Score=128.27  Aligned_cols=184  Identities=13%  Similarity=0.126  Sum_probs=125.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      |++|+||||||+||+++++.|+++|++|++++|++++.+++....           .++.++.+|++|.+++.+++..  
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~   69 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS-----------ANIFTLAFDVTDHPGTKAALSQLP   69 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----------CCCeEEEeeCCCHHHHHHHHHhcc
Confidence            468999999999999999999999999999999987655553321           2356899999999999998875  


Q ss_pred             --cCEEEEccCCCCCC-----------CCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCccchh
Q 044905           82 --AGKVVVTIGPTEDG-----------PTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISSFFNN  146 (427)
Q Consensus        82 --~d~Vi~~ag~~~~~-----------~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~  146 (427)
                        .|.+||++|.....           ..+++|+.++.++++++...  ...++|++||.+...+     .....     
T Consensus        70 ~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~-----~~~~~-----  139 (240)
T PRK06101         70 FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA-----LPRAE-----  139 (240)
T ss_pred             cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC-----CCCCc-----
Confidence              47889998753211           14678888999999988753  2357888887642111     01111     


Q ss_pred             hhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          147 LFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      .|+..+ ...+.+.+.+    ...|++++.++||++......   ..      ....+ ..++.+|+|+.++..+..
T Consensus       140 ~Y~asK-~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~---~~------~~~~~-~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        140 AYGASK-AAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTD---KN------TFAMP-MIITVEQASQEIRAQLAR  205 (240)
T ss_pred             hhhHHH-HHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcC---CC------CCCCC-cccCHHHHHHHHHHHHhc
Confidence            222222 2244444433    357899999999966542110   00      00111 247899999999998874

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.56  E-value=2.2e-13  Score=129.11  Aligned_cols=211  Identities=18%  Similarity=0.146  Sum_probs=131.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++|+|||++|++|+++++.|+++|++|+++.|+... ...+.....       ....++.++.+|++|.+++.++++  
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYG-------FTEDQVRLKELDVTDTEECAEALAEI   74 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhh-------ccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999999998641 122211100       012356789999999998887765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           .+|++||++|.....+           .+++|+.+..++++    .++..+..+||++||...+.+.     ...
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----~~~  149 (245)
T PRK12824         75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ-----FGQ  149 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC-----CCC
Confidence                 4799999998754322           34577777777644    4466677899999877632211     111


Q ss_pred             CccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +.|.     ..+ .+.+.+.+.    +...++++++++||.+..............  ....+..  .+.+.+|+++++.
T Consensus       150 ~~Y~-----~sK-~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~  221 (245)
T PRK12824        150 TNYS-----AAK-AGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMK--RLGTPEEIAAAVA  221 (245)
T ss_pred             hHHH-----HHH-HHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCC--CCCCHHHHHHHHH
Confidence            2222     111 123333333    335689999999995543211100000000  0001111  3568899999998


Q ss_pred             HHhcCcc-cccCcEEEEecCC
Q 044905          215 DVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~-~~~g~~~nI~~~~  234 (427)
                      .++.... ...|+.+++.++.
T Consensus       222 ~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        222 FLVSEAAGFITGETISINGGL  242 (245)
T ss_pred             HHcCccccCccCcEEEECCCe
Confidence            8875432 3468899988875

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.56  E-value=1.9e-13  Score=129.99  Aligned_cols=211  Identities=11%  Similarity=0.067  Sum_probs=128.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .++|+||||||+||.+++++|+++|++|+...++ ++....+......       ...++.++.+|++|.+++.+++.  
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-------QGGEALAVAADVADEADVLRLFEAV   74 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-------CCCcEEEEEeccCCHHHHHHHHHHH
Confidence            4589999999999999999999999998877644 3333332221110       01245689999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCC-C-----------CccccHHHHHHHHHHHHHcC-------CCeEEEEecccccccccCCC
Q 044905           81 -----NAGKVVVTIGPTEDG-P-----------TSEVSTSDAFQVIQAAQLAG-------VGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~-~-----------~~~vn~~~~~~ll~Aa~~~g-------Vk~~V~vSSs~v~~~~~~~~  136 (427)
                           .+|+|||++|..... +           .+++|+.++.++++++...-       -.++|++||.+...+...  
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~--  152 (248)
T PRK06123         75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG--  152 (248)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--
Confidence                 579999999875321 1           36688888888888775431       136888888653221110  


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ceEEe--cccccCCCCCcccHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NVVVS--AEASVDANDYKVAKSQI  209 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i~~~--~~~~~~~~~~~i~v~DV  209 (427)
                        ....     |+..+ ...+.+.+.+.    ..|++++++|||.+......... .-...  ....+..  -..+.+|+
T Consensus       153 --~~~~-----Y~~sK-aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~d~  222 (248)
T PRK06123        153 --EYID-----YAASK-GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG--RGGTAEEV  222 (248)
T ss_pred             --Cccc-----hHHHH-HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCC--CCcCHHHH
Confidence              0111     22222 23455444443    45899999999854332110000 00000  0000111  13478999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++++.++..... ..|..|++.++
T Consensus       223 a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        223 ARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHHhCccccCccCCEEeecCC
Confidence            9999988864322 35788888764

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.2e-13  Score=129.69  Aligned_cols=210  Identities=16%  Similarity=0.116  Sum_probs=130.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .++|+||||+|+||+++++.|+++|++|+++.|+. .....+......       ...++.++.+|++|.+++.++++  
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~~~   81 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-------LGRRAVALQADLADEAEVRALVARA   81 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            45899999999999999999999999999887653 333322221100       02345689999999998888765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----CCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++...    +-.++|+++|...+.        +.
T Consensus        82 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~--------~~  153 (258)
T PRK09134         82 SAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWN--------LN  153 (258)
T ss_pred             HHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcC--------CC
Confidence                 4799999998654321           4567888889998887653    235677666543210        00


Q ss_pred             CccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHh
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      +.+  ..|..+| .+.+.+.+.+.   ..++.++.++||.+.....................  ...+++|+|++++.++
T Consensus       154 p~~--~~Y~~sK-~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~d~a~~~~~~~  228 (258)
T PRK09134        154 PDF--LSYTLSK-AALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHAATPLG--RGSTPEEIAAAVRYLL  228 (258)
T ss_pred             CCc--hHHHHHH-HHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHhcCCCC--CCcCHHHHHHHHHHHh
Confidence            111  1233222 23455555544   23489999999955322110000000000011111  2578999999999999


Q ss_pred             cCcccccCcEEEEecCC
Q 044905          218 SNTAVAENKVVKVFTDP  234 (427)
Q Consensus       218 ~~~~~~~g~~~nI~~~~  234 (427)
                      +.+ ...|+.+.+.++.
T Consensus       229 ~~~-~~~g~~~~i~gg~  244 (258)
T PRK09134        229 DAP-SVTGQMIAVDGGQ  244 (258)
T ss_pred             cCC-CcCCCEEEECCCe
Confidence            854 3568888888875

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.56  E-value=3.4e-13  Score=129.09  Aligned_cols=212  Identities=14%  Similarity=0.098  Sum_probs=131.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||||+||.++++.|+++|++|++++|++++.+.+.......       ..++.++.+|++|++++.++++  
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   77 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE-------GGEAVALAGDVRDEAYAKALVALA   77 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999987655443221110       1245688999999998887775  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .+|++||++|.... ++           .+++|+.+...+++    .+++.+..++|++||...+.. .   ..+
T Consensus        78 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~-~---~~~  153 (254)
T PRK07478         78 VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTA-G---FPG  153 (254)
T ss_pred             HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhcc-C---CCC
Confidence                 68999999996421 11           45667766665544    445566678999987652210 0   011


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce-EEec---ccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV-VVSA---EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i-~~~~---~~~~~~~~~~i~v~DVA~  211 (427)
                      ..     .|+.++ .+.+.+.+.+    ...|+++..|+||++........... ....   ...+..  .+.+.+|+|+
T Consensus       154 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~  225 (254)
T PRK07478        154 MA-----AYAASK-AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALK--RMAQPEEIAQ  225 (254)
T ss_pred             cc-----hhHHHH-HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCC--CCcCHHHHHH
Confidence            12     222222 2234444433    34589999999997654211000000 0000   000111  3568999999


Q ss_pred             HHHHHhcCcccc-cCcEEEEecC
Q 044905          212 LVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      .++.++++...+ .|..+.+.++
T Consensus       226 ~~~~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        226 AALFLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             HHHHHcCchhcCCCCCeEEeCCc
Confidence            999988754333 5677777555

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.56  E-value=6.2e-13  Score=127.04  Aligned_cols=212  Identities=16%  Similarity=0.140  Sum_probs=133.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||.++++.|+++|++|+++.|+....+.+......       ...++.++.+|+.|.+++..+++ 
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   78 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA-------AGGKAEALACHIGEMEQIDALFAH   78 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999987655444332111       01234578999999988876654 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|++||++|.... .+           .+++|+.+...+++++    +..+..+++++||......     ..
T Consensus        79 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~  153 (252)
T PRK07035         79 IRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----GD  153 (252)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----CC
Confidence                  47999999985321 11           4567777877777665    4456778998887642111     11


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccce-E-Ee--cccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNV-V-VS--AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i-~-~~--~~~~~~~~~~~i~v~DVA  210 (427)
                      +...|     +.++ .+.+.+.+.+.    ..|++++.+.||++..........- . ..  ....+..  .+...+|+|
T Consensus       154 ~~~~Y-----~~sK-~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va  225 (252)
T PRK07035        154 FQGIY-----SITK-AAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLR--RHAEPSEMA  225 (252)
T ss_pred             CCcch-----HHHH-HHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCC--CcCCHHHHH
Confidence            11222     2222 23455554443    4689999999996654221100000 0 00  0001111  366899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+..++++... ..|.++.+.++
T Consensus       226 ~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        226 GAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             HHHHHHhCccccCccCCEEEeCCC
Confidence            999998875433 35677777654

>PRK06398 aldose dehydrogenase; Validated

Probab=99.55  E-value=4.4e-13  Score=129.08  Aligned_cols=202  Identities=14%  Similarity=0.094  Sum_probs=130.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.....                  ++.++.+|++|++++.++++ 
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------------------~~~~~~~D~~~~~~i~~~~~~   65 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------------------DVDYFKVDVSNKEQVIKGIDY   65 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------------------ceEEEEccCCCHHHHHHHHHH
Confidence            34579999999999999999999999999999999864311                  23589999999998887764 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|....++           .+++|+.++..+++++..    .+..+||++||...+..     ..+
T Consensus        66 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~  140 (258)
T PRK06398         66 VISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-----TRN  140 (258)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC-----CCC
Confidence                  5899999999654322           356888888888777643    45678999988753211     111


Q ss_pred             CCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEe-------------cccccCCCCCc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVS-------------AEASVDANDYK  203 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~-------------~~~~~~~~~~~  203 (427)
                      ...     |+..+ .+.+.+.+.+.   ..++++..|+||++..............             ....+..  ..
T Consensus       141 ~~~-----Y~~sK-aal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  212 (258)
T PRK06398        141 AAA-----YVTSK-HAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMK--RV  212 (258)
T ss_pred             Cch-----hhhhH-HHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcC--CC
Confidence            122     22222 22444444433   2349999999996543211000000000             0000111  25


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+.+|+|++++.++..... ..|..+.+.++.
T Consensus       213 ~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        213 GKPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            6899999999998875332 367777776663

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.55  E-value=3.2e-13  Score=128.57  Aligned_cols=210  Identities=14%  Similarity=0.115  Sum_probs=125.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++|+||||||+||..+++.|+++|++|+++. |++.....+......       ...++.++.+|++|.+++..+++  
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-------AGGRACVVAGDVANEADVIAMFDAV   74 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEEeccCCHHHHHHHHHHH
Confidence            57999999999999999999999999998765 444443333221111       01356689999999988876653  


Q ss_pred             -----CcCEEEEccCCCCCC-C-----------CccccHHHHHHHHHHHHH-cC------CCeEEEEecccccccccCCC
Q 044905           81 -----NAGKVVVTIGPTEDG-P-----------TSEVSTSDAFQVIQAAQL-AG------VGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~-~-----------~~~vn~~~~~~ll~Aa~~-~g------Vk~~V~vSSs~v~~~~~~~~  136 (427)
                           .+|++||++|..... .           .+.+|+.+...+++++.. ..      -.+||++||.+...+..   
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---  151 (248)
T PRK06947         75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP---  151 (248)
T ss_pred             HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---
Confidence                 589999999965321 1           356777777777654433 21      23588888765221111   


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc--cce-EEecccccCCCCCcccHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS--YNV-VVSAEASVDANDYKVAKSQI  209 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~--~~i-~~~~~~~~~~~~~~i~v~DV  209 (427)
                       .....|.     ..+ ...+.+.+.+    ...|++++++|||+++.......  ... .......+..  ...+.+|+
T Consensus       152 -~~~~~Y~-----~sK-~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~v  222 (248)
T PRK06947        152 -NEYVDYA-----GSK-GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLG--RAGEADEV  222 (248)
T ss_pred             -CCCcccH-----hhH-HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCC--CCcCHHHH
Confidence             1111222     221 1233333333    34589999999996654321100  000 0000011111  24688999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEec
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFT  232 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~  232 (427)
                      |+.++.+++++.. ..|..+.+.+
T Consensus       223 a~~~~~l~~~~~~~~~G~~~~~~g  246 (248)
T PRK06947        223 AETIVWLLSDAASYVTGALLDVGG  246 (248)
T ss_pred             HHHHHHHcCccccCcCCceEeeCC
Confidence            9999998876532 3566666654

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.5e-13  Score=128.91  Aligned_cols=189  Identities=13%  Similarity=0.162  Sum_probs=122.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .++|+||||||+||.+++++|+++| ++|++++|+++. .+.+......      ....++.++.+|+.|.+++.++++ 
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~------~~~~~v~~~~~D~~~~~~~~~~~~~   81 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA------AGASSVEVIDFDALDTDSHPKVIDA   81 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh------cCCCceEEEEecCCChHHHHHHHHH
Confidence            4689999999999999999999995 999999999875 4443221111      112256789999999887665543 


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHH----HHHHHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQ----VIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~----ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           +.|++||++|......           .+++|+.+...    ++.++.+.+..+||++||.+....  .   .+.
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~--~---~~~  156 (253)
T PRK07904         82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV--R---RSN  156 (253)
T ss_pred             HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC--C---CCC
Confidence                 6999999998753211           14566666554    566777778889999998752111  0   111


Q ss_pred             CccchhhhhccccccH----HHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTV----PEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~----E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      ..|     +.++ .+.    +.+...+...|+++++++||++.+...   ...      .. . ...++.+|+|+.++.+
T Consensus       157 ~~Y-----~~sK-aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~---~~~------~~-~-~~~~~~~~~A~~i~~~  219 (253)
T PRK07904        157 FVY-----GSTK-AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMS---AHA------KE-A-PLTVDKEDVAKLAVTA  219 (253)
T ss_pred             cch-----HHHH-HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchh---ccC------CC-C-CCCCCHHHHHHHHHHH
Confidence            112     2221 112    222233446799999999996654211   110      00 0 1257999999999999


Q ss_pred             hcCc
Q 044905          217 FSNT  220 (427)
Q Consensus       217 l~~~  220 (427)
                      +.+.
T Consensus       220 ~~~~  223 (253)
T PRK07904        220 VAKG  223 (253)
T ss_pred             HHcC
Confidence            8743

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4.2e-13  Score=128.69  Aligned_cols=213  Identities=16%  Similarity=0.117  Sum_probs=132.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||+|+||+++++.|+++|++|+++.|+.+. ...+......       ...++..+.+|++|.+++.+++.
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~i~~~~~   78 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-------AGRRAIQIAADVTSKADLRAAVA   78 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHH
Confidence            345789999999999999999999999999999997643 2333221100       01245678999999998887765


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ..|++||++|.....+           .+++|+.+...+++++    ...+..++|++||.+...+...   .
T Consensus        79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---~  155 (254)
T PRK06114         79 RTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---L  155 (254)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---C
Confidence                   3699999999754322           4567777877776655    3455678999987652211110   0


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEE-e---cccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVV-S---AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~-~---~~~~~~~~~~~i~v~DVA  210 (427)
                      ...     .|...+ .+.+.+.+.+    ...|+++.+++||.++...... ..... .   ....+..  .+...+|||
T Consensus       156 ~~~-----~Y~~sK-aa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~-~~~~~~~~~~~~~~p~~--r~~~~~dva  226 (254)
T PRK06114        156 LQA-----HYNASK-AGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTR-PEMVHQTKLFEEQTPMQ--RMAKVDEMV  226 (254)
T ss_pred             Ccc-----hHHHHH-HHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccc-ccchHHHHHHHhcCCCC--CCcCHHHHH
Confidence            011     222222 2234444433    3568999999999664422110 00000 0   0011111  256889999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ..++.++++... ..|.++.+.++
T Consensus       227 ~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        227 GPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             HHHHHHcCccccCcCCceEEECcC
Confidence            999998875433 35677777665

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.55  E-value=5.5e-13  Score=127.83  Aligned_cols=207  Identities=15%  Similarity=0.156  Sum_probs=129.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+|+||.++++.|+++|++|+++.|+... ...+...             ++.++.+|++|.+++.++++ 
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~-------------~~~~~~~Dl~~~~~~~~~~~~   72 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-------------GVFTIKCDVGNRDQVKKSKEV   72 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC-------------CCeEEEecCCCHHHHHHHHHH
Confidence            44789999999999999999999999999988776542 2333211             24589999999998888765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++..+    +..+++.+..+||++||...+...    ..+
T Consensus        73 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~----~~~  148 (255)
T PRK06463         73 VEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA----AEG  148 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC----CCC
Confidence                  5799999998753222           456777775555    444555566799999887532110    111


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceE---Ee---cccccCCCCCcccHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVV---VS---AEASVDANDYKVAKSQ  208 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~---~~---~~~~~~~~~~~i~v~D  208 (427)
                      ...     |+.++ .+.+.+.+.+.    ..|+++..++||++........ ..-.   ..   ....+..  .+.+.+|
T Consensus       149 ~~~-----Y~asK-aa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  220 (255)
T PRK06463        149 TTF-----YAITK-AGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLK--TTGKPED  220 (255)
T ss_pred             ccH-----hHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcC--CCcCHHH
Confidence            121     22222 22444444433    4689999999996654211000 0000   00   0001111  2568999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +|++++.+++.... ..|..+.+.++.
T Consensus       221 va~~~~~l~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        221 IANIVLFLASDDARYITGQVIVADGGR  247 (255)
T ss_pred             HHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            99999998875432 357788877664

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.55  E-value=4e-13  Score=128.39  Aligned_cols=211  Identities=12%  Similarity=0.094  Sum_probs=132.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||+|+||+++++.|+++|++|+++.|+.+....+......       ...++.++.+|++|.+++..+++   
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~i~~~~~~~~   79 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE-------AGGEALFVACDVTRDAEVKALVEQTI   79 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            47999999999999999999999999999999998755443322111       02356789999999998887765   


Q ss_pred             ----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          ..|++||++|.... .+           .+++|+.+...+++++    .+.+..++|++||.+.+.+.     .+.
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~~  154 (253)
T PRK06172         80 AAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAA-----PKM  154 (253)
T ss_pred             HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC-----CCC
Confidence                45999999986432 11           3457777776665543    34556789988877632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc---eEEec--ccccCCCCCcccHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN---VVVSA--EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~---i~~~~--~~~~~~~~~~i~v~DVA~  211 (427)
                      ..     |...+ .+.+.+.+.+.    ..|+++..+.||.+..........   .....  ...+..  ...+.+|+++
T Consensus       155 ~~-----Y~~sK-aa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~ia~  226 (253)
T PRK06172        155 SI-----YAASK-HAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVG--RIGKVEEVAS  226 (253)
T ss_pred             ch-----hHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCC--CccCHHHHHH
Confidence            21     22111 12344444433    468999999999654321110000   00000  000111  2568999999


Q ss_pred             HHHHHhcCcc-cccCcEEEEecCC
Q 044905          212 LVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      .+++++.+.. ...|..+.+.++.
T Consensus       227 ~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        227 AVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             HHHHHhCccccCcCCcEEEECCCc
Confidence            9999887542 3467888887763

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.55  E-value=2.2e-13  Score=129.16  Aligned_cols=211  Identities=11%  Similarity=0.114  Sum_probs=125.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      |++|+||||+|+||+++++.|+++|++|+++ .|++++..++......+       ..++.++.+|+.|.+++.++++. 
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~d~~~i~~~~~~~   73 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA-------GGKAFVLQADISDENQVVAMFTAI   73 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC-------CCeEEEEEccCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999875 56655443332221110       12456899999999998887764 


Q ss_pred             ------cCEEEEccCCCCC-C-----------CCccccHHHHHHHHHHHHHc-------CCCeEEEEecccccccccCCC
Q 044905           82 ------AGKVVVTIGPTED-G-----------PTSEVSTSDAFQVIQAAQLA-------GVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        82 ------~d~Vi~~ag~~~~-~-----------~~~~vn~~~~~~ll~Aa~~~-------gVk~~V~vSSs~v~~~~~~~~  136 (427)
                            +|+|||++|.... .           ..+++|+.++.++++++...       ..++||++||.+.+.+..   
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~---  150 (247)
T PRK09730         74 DQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP---  150 (247)
T ss_pred             HHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC---
Confidence                  5899999996422 1           14567777777666655432       135699998875322211   


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc--eEE-ecccccCCCCCcccHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN--VVV-SAEASVDANDYKVAKSQI  209 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~--i~~-~~~~~~~~~~~~i~v~DV  209 (427)
                       .....|     +..+ ...+.+.+.+    ...+++++++|||.+..........  ... .....+..  ...+.+|+
T Consensus       151 -~~~~~Y-----~~sK-~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv  221 (247)
T PRK09730        151 -GEYVDY-----AASK-GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ--RGGQPEEV  221 (247)
T ss_pred             -Ccccch-----HhHH-HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC--CCcCHHHH
Confidence             011112     2111 1244444433    2468999999999554321110000  000 00000111  13478999


Q ss_pred             HHHHHHHhcCcc-cccCcEEEEecC
Q 044905          210 ASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      |+++..++.... ...|..+.+.++
T Consensus       222 a~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        222 AQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHHhhcChhhcCccCcEEecCCC
Confidence            999998886432 235667776653

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.54  E-value=7.3e-13  Score=127.11  Aligned_cols=215  Identities=15%  Similarity=0.115  Sum_probs=129.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .++++||||+|+||.++++.|+++|++|+++.++... ...+......   +.. ...++.++.+|++|.+++.+++.  
T Consensus         8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~---l~~-~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAA---VKA-AGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHH---HHH-hCCcEEEEecCcCCHHHHHHHHHHH
Confidence            4789999999999999999999999998877765431 1111111100   000 01356689999999999887765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           ++|++||++|....++           .+++|+.++..+++++...  ...++++++|+..+..  .   .... 
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~--~---~~~~-  157 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF--T---PFYS-  157 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc--C---CCcc-
Confidence                 5799999999643211           4567888888888888653  1246676644432111  1   0111 


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE---E---ecccccCCCCCcccHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV---V---SAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~---~---~~~~~~~~~~~~i~v~DVA~~  212 (427)
                          .|+.++ .+.+.+.+.+.    ..|++++.++||++............   .   ...........+.+.+|+|++
T Consensus       158 ----~Y~~sK-~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (257)
T PRK12744        158 ----AYAGSK-APVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPF  232 (257)
T ss_pred             ----cchhhH-HHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHH
Confidence                222222 33555555554    35799999999965432110000000   0   000111111137789999999


Q ss_pred             HHHHhcCcccccCcEEEEecC
Q 044905          213 VADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~  233 (427)
                      +..+++......|.++++.++
T Consensus       233 ~~~l~~~~~~~~g~~~~~~gg  253 (257)
T PRK12744        233 IRFLVTDGWWITGQTILINGG  253 (257)
T ss_pred             HHHhhcccceeecceEeecCC
Confidence            999987421225788888776

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.54  E-value=1.3e-12  Score=126.83  Aligned_cols=208  Identities=13%  Similarity=0.085  Sum_probs=130.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|+.|.+++..+++  
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~   81 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA-------AGGEALAVKADVLDKESLEQARQQI   81 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEECCCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999987655444322111       01245689999999988877654  


Q ss_pred             -----CcCEEEEccCCCCCC---------------C-----------CccccHHHHHHHHH----HHHHcCCCeEEEEec
Q 044905           81 -----NAGKVVVTIGPTEDG---------------P-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYD  125 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~---------------~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSS  125 (427)
                           .+|++||++|.....               +           .+++|+.+...+++    .+...+..+||++||
T Consensus        82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS  161 (278)
T PRK08277         82 LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS  161 (278)
T ss_pred             HHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence                 689999999853211               0           23456666665444    444456678999988


Q ss_pred             ccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEec--------
Q 044905          126 GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSA--------  193 (427)
Q Consensus       126 s~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~--------  193 (427)
                      ...+..     ..+...     |+..+ .+.+.+.+.+.    ..|+++..|+||.+......   .+....        
T Consensus       162 ~~~~~~-----~~~~~~-----Y~~sK-~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~---~~~~~~~~~~~~~~  227 (278)
T PRK08277        162 MNAFTP-----LTKVPA-----YSAAK-AAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNR---ALLFNEDGSLTERA  227 (278)
T ss_pred             chhcCC-----CCCCch-----hHHHH-HHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchh---hhhccccccchhHH
Confidence            764221     111122     22222 23444444433    46899999999965442111   000000        


Q ss_pred             ----ccccCCCCCcccHHHHHHHHHHHhcC-ccc-ccCcEEEEecC
Q 044905          194 ----EASVDANDYKVAKSQIASLVADVFSN-TAV-AENKVVKVFTD  233 (427)
Q Consensus       194 ----~~~~~~~~~~i~v~DVA~~v~~al~~-~~~-~~g~~~nI~~~  233 (427)
                          ...+..  -+...+|||++++.+++. ... ..|..+.+.++
T Consensus       228 ~~~~~~~p~~--r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        228 NKILAHTPMG--RFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             HHHhccCCcc--CCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence                001111  256899999999998875 332 35777777665

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.54  E-value=6.5e-13  Score=126.59  Aligned_cols=208  Identities=19%  Similarity=0.145  Sum_probs=132.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.++|+||||+|+||+++++.|+++|++|+++.++. .....+....          ..++.++.+|+.|.+++.+++..
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   73 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----------GDRAIALQADVTDREQVQAMFAT   73 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----------CCceEEEEcCCCCHHHHHHHHHH
Confidence            346899999999999999999999999998876543 3333332210          13456899999999988877753


Q ss_pred             --------cCEEEEccCCCCC------CC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccc
Q 044905           82 --------AGKVVVTIGPTED------GP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        82 --------~d~Vi~~ag~~~~------~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~  132 (427)
                              +|++||++|....      .+           .+++|+.+..++++++.    ..+..++|++||....   
T Consensus        74 ~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~---  150 (253)
T PRK08642         74 ATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQ---  150 (253)
T ss_pred             HHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCcccc---
Confidence                    8999999975310      11           36778888888888875    3456789999876421   


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-ccceEEe--cccccCCCCCccc
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-SYNVVVS--AEASVDANDYKVA  205 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~~~i~~~--~~~~~~~~~~~i~  205 (427)
                        ....+..     .|+..+ .+.+.+.+.+.    ..|+++..|+||+++...... .......  ....+..  .+.+
T Consensus       151 --~~~~~~~-----~Y~~sK-~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~  220 (253)
T PRK08642        151 --NPVVPYH-----DYTTAK-AALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLR--KVTT  220 (253)
T ss_pred             --CCCCCcc-----chHHHH-HHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcC--CCCC
Confidence              1111112     233222 23555555543    468999999999765421110 0000000  0011111  3789


Q ss_pred             HHHHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          206 KSQIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       206 v~DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      .+|+|++++.++.... ...|..+.+.++
T Consensus       221 ~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        221 PQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999987543 346777777665

>PRK08589 short chain dehydrogenase; Validated

Probab=99.54  E-value=1.2e-12  Score=127.06  Aligned_cols=211  Identities=14%  Similarity=0.083  Sum_probs=130.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|+++.|+ .....+......       ...++.++.+|++|.+++..+++ 
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   75 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS-------NGGKAKAYHVDISDEQQVKDFASE   75 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh-------cCCeEEEEEeecCCHHHHHHHHHH
Confidence            456799999999999999999999999999999998 544333221111       01245689999999988877664 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|++||++|.... ++           .+++|+.+...+++++    .+.+ .++|++||.+.+...     .
T Consensus        76 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~  149 (272)
T PRK08589         76 IKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD-----L  149 (272)
T ss_pred             HHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC-----C
Confidence                  47999999987532 21           3345666666555554    3344 689999877532111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceE-------Eec---ccccCCCCCcc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVV-------VSA---EASVDANDYKV  204 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~-------~~~---~~~~~~~~~~i  204 (427)
                      ....     |+.++ .+.+.+.+.+    ...|+++..|.||++............       ...   ...+..  .+.
T Consensus       150 ~~~~-----Y~asK-aal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  221 (272)
T PRK08589        150 YRSG-----YNAAK-GAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLG--RLG  221 (272)
T ss_pred             CCch-----HHHHH-HHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCC--CCc
Confidence            1122     22222 2234444443    356899999999966532111000000       000   000111  256


Q ss_pred             cHHHHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      +.+|+|++++.++++.. ...|..+.+.++.
T Consensus       222 ~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        222 KPEEVAKLVVFLASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence            89999999999887533 3367777777663

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.54  E-value=4.4e-13  Score=128.52  Aligned_cols=209  Identities=14%  Similarity=0.091  Sum_probs=128.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++.++|+||||||+||.++++.|+++|++|++++|+......+.....            ..++.+|++|.+++.++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------------~~~~~~D~~~~~~~~~~~~   71 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------------GLFVPTDVTDEDAVNALFD   71 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------------CcEEEeeCCCHHHHHHHHH
Confidence            3667899999999999999999999999999999998765444322110            1378899999998888775


Q ss_pred             -------CcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           81 -------NAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                             ++|+|||++|....  .+           .+++|+.+..++++++    .+.+..++|++||+....+..   
T Consensus        72 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~---  148 (255)
T PRK06057         72 TAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSA---  148 (255)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCC---
Confidence                   47999999986432  11           3446666766666554    345567899888764211110   


Q ss_pred             CCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEe--cc---cccCCCCCcccHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVS--AE---ASVDANDYKVAKS  207 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~---~~~~~~~~~i~v~  207 (427)
                       .+...     |+..+ .+.+.+.+    .+...|+++++++||.+..............  ..   ..+..  .+.+.+
T Consensus       149 -~~~~~-----Y~~sK-aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  219 (255)
T PRK06057        149 -TSQIS-----YTASK-GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMG--RFAEPE  219 (255)
T ss_pred             -CCCcc-----hHHHH-HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCC--CCcCHH
Confidence             01111     22111 11222222    3345689999999996643221100000000  00   00111  368899


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |+|+++..++.+... ..+..+.+.++
T Consensus       220 ~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        220 EIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             HHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999888765332 34667766554

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.54  E-value=6.3e-13  Score=127.18  Aligned_cols=214  Identities=15%  Similarity=0.147  Sum_probs=132.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|+++.|+.+.++.+......       ...++.++.+|++|.+++.++++ 
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~   79 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEA-------EGGAAHVVSLDVTDYQSIKAAVAH   79 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHH
Confidence            3457999999999999999999999999999999998765554332110       02356789999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC--------CCeEEEEeccccccc
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG--------VGHVAIIYDGNTTAA  131 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g--------Vk~~V~vSSs~v~~~  131 (427)
                            .+|++||++|.....+           .+.+|+.+..++++++..    ..        ..++|++||+..+..
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  159 (258)
T PRK06949         80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV  159 (258)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence                  5899999999643221           356677777777776642    22        358888887653211


Q ss_pred             ccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEE-ecccccCCCCCcccH
Q 044905          132 STYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVV-SAEASVDANDYKVAK  206 (427)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v  206 (427)
                           .....     .|...+ ...+.+.+.+.    ..++++++++||++..........-.. ...........+...
T Consensus       160 -----~~~~~-----~Y~~sK-~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p  228 (258)
T PRK06949        160 -----LPQIG-----LYCMSK-AAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKP  228 (258)
T ss_pred             -----CCCcc-----HHHHHH-HHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCH
Confidence                 01111     222221 22344444332    468999999999665422110000000 000000011135678


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|++..+.+++..... ..|..+.+.++
T Consensus       229 ~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        229 EDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             HHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence            9999999998874433 35566655443

>PRK06196 oxidoreductase; Provisional

Probab=99.54  E-value=2.9e-13  Score=134.27  Aligned_cols=203  Identities=11%  Similarity=0.009  Sum_probs=124.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||.++++.|+++|++|++++|+..+...+....           .++.++.+|++|.+++.+++.  
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-----------~~v~~~~~Dl~d~~~v~~~~~~~   93 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-----------DGVEVVMLDLADLESVRAFAERF   93 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------hhCeEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987654442211           124589999999998887663  


Q ss_pred             -----CcCEEEEccCCCCCCC---------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCC-----
Q 044905           81 -----NAGKVVVTIGPTEDGP---------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVL-----  137 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~---------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~-----  137 (427)
                           ++|+|||++|......         .+++|+.+...+++    ++++.+..+||++||.+..... ..+.     
T Consensus        94 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~-~~~~~~~~~  172 (315)
T PRK06196         94 LDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSP-IRWDDPHFT  172 (315)
T ss_pred             HhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCC-CCccccCcc
Confidence                 5899999999643210         34677777555554    4555666799999887532111 1110     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-eEE-eccccc-CCCC--CcccHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-VVV-SAEASV-DAND--YKVAKSQ  208 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i~~-~~~~~~-~~~~--~~i~v~D  208 (427)
                      .+.+.  ...|+.++ .+.+.+...+    ...|++++.++||++.......... ... .+.... ..++  .+.+.+|
T Consensus       173 ~~~~~--~~~Y~~SK-~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (315)
T PRK06196        173 RGYDK--WLAYGQSK-TANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQ  249 (315)
T ss_pred             CCCCh--HHHHHHHH-HHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhH
Confidence            11111  12344443 3344444333    3568999999999554322111000 000 000000 0000  1457899


Q ss_pred             HHHHHHHHhcCc
Q 044905          209 IASLVADVFSNT  220 (427)
Q Consensus       209 VA~~v~~al~~~  220 (427)
                      +|..++.++..+
T Consensus       250 ~a~~~~~l~~~~  261 (315)
T PRK06196        250 GAATQVWAATSP  261 (315)
T ss_pred             HHHHHHHHhcCC
Confidence            999999888654

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.54  E-value=8.2e-13  Score=127.20  Aligned_cols=194  Identities=13%  Similarity=0.137  Sum_probs=125.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|++|.+|+++|+++|++|++++|+......+.... .       ...++.++.+|++|.+++..+++ 
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-------~~~~~~~~~~D~~d~~~~~~~~~~   74 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-------YPGRHRWVVADLTSEAGREAVLAR   74 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-------cCCceEEEEccCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999976655443221 1       12356789999999988877654 


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           .+|+|||++|....++           .+++|+.++.++++++..    .+..++|++||.....+.     ...
T Consensus        75 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~  149 (263)
T PRK09072         75 AREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY-----PGY  149 (263)
T ss_pred             HHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-----CCc
Confidence                 5799999998754321           445888888888887754    345678888766421111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      ..     |+..+ .+.+.+.+.+    ...++.++.+.||++........... .  ....  +....+.+|+|+.++.+
T Consensus       150 ~~-----Y~~sK-~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~-~--~~~~--~~~~~~~~~va~~i~~~  218 (263)
T PRK09072        150 AS-----YCASK-FALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA-L--NRAL--GNAMDDPEDVAAAVLQA  218 (263)
T ss_pred             cH-----HHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc-c--cccc--cCCCCCHHHHHHHHHHH
Confidence            11     22222 1223333333    35689999999996643221100000 0  0001  11357899999999999


Q ss_pred             hcC
Q 044905          217 FSN  219 (427)
Q Consensus       217 l~~  219 (427)
                      +.+
T Consensus       219 ~~~  221 (263)
T PRK09072        219 IEK  221 (263)
T ss_pred             HhC
Confidence            974

>TIGR02415 23BDH acetoin reductases

Probab=99.53  E-value=7.1e-13  Score=126.53  Aligned_cols=211  Identities=17%  Similarity=0.128  Sum_probs=128.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      ++++||||+|+||.+|+++|++.|++|+++.|+......+......       ...++.++.+|++|.+++.+++.    
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~i~~~~~~~~~   73 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ-------AGGKAVAYKLDVSDKDQVFSAIDQAAE   73 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999987654443322111       01245688999999998887754    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         .+|+|||++|....++           .+++|+.+...+++++..    .+ ..++|++||.....+.     ....
T Consensus        74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~  148 (254)
T TIGR02415        74 KFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN-----PILS  148 (254)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC-----CCCc
Confidence               4799999998754322           356777777766665543    33 3688888876532111     1112


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-------eEEecc----cccCCCCCcccH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-------VVVSAE----ASVDANDYKVAK  206 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-------i~~~~~----~~~~~~~~~i~v  206 (427)
                      .|.     ..+ .+.+.+.+.+    ...++.++.++||+++.........       ......    ......-.+.+.
T Consensus       149 ~Y~-----~sK-~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (254)
T TIGR02415       149 AYS-----STK-FAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEP  222 (254)
T ss_pred             chH-----HHH-HHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCH
Confidence            222     111 1234444333    3458999999999664332110000       000000    000000136789


Q ss_pred             HHHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      +|+++++..+++..... .|..+.+.++
T Consensus       223 ~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       223 EDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHHHhhcccccCCccCcEEEecCC
Confidence            99999999998764333 3555555443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.53  E-value=4.2e-13  Score=128.44  Aligned_cols=205  Identities=17%  Similarity=0.137  Sum_probs=131.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|++++|+...  ..  .           ..++.++.+|+.|.+++.+++. 
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~--~-----------~~~~~~~~~D~~~~~~~~~~~~~   68 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TV--D-----------GRPAEFHAADVRDPDQVAALVDA   68 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hh--c-----------CCceEEEEccCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999998643  11  0           1234588999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH-----cCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL-----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~-----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|+|||++|......           .+++|+.++.++++++..     .+..+||++||.......     .
T Consensus        69 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~  143 (252)
T PRK07856         69 IVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----P  143 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----C
Confidence                  3599999998654321           456788888888887754     234689999877532111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh-c--CCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI-E--TDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~-~--~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~DVA~  211 (427)
                      ...     .|+..+ .+.+.+.+.+. +  ..+.+..++||++..........-  ...  ....+..  .+.+.+|+|.
T Consensus       144 ~~~-----~Y~~sK-~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~va~  215 (252)
T PRK07856        144 GTA-----AYGAAK-AGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLG--RLATPADIAW  215 (252)
T ss_pred             CCc-----hhHHHH-HHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCC--CCcCHHHHHH
Confidence            112     222222 23455555443 1  228999999996643211000000  000  0001111  2568899999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++.++..... ..|..+.+.++.
T Consensus       216 ~~~~L~~~~~~~i~G~~i~vdgg~  239 (252)
T PRK07856        216 ACLFLASDLASYVSGANLEVHGGG  239 (252)
T ss_pred             HHHHHcCcccCCccCCEEEECCCc
Confidence            99998875333 467788887764

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.53  E-value=7.6e-13  Score=127.97  Aligned_cols=213  Identities=12%  Similarity=0.088  Sum_probs=131.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|.||.++++.|+++|++|+++.|+..++..+......      ....++.++.+|++|.+++.++++  
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKS------ESNVDVSYIVADLTKREDLERTVKEL   80 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------hcCCceEEEEecCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999997765444322111      001245689999999998888775  


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          +.|++||++|....++           .+++|+.+...+    +..+++.+..++|++||......     .....
T Consensus        81 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~-----~~~~~  155 (263)
T PRK08339         81 KNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP-----IPNIA  155 (263)
T ss_pred             HhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC-----CCcch
Confidence                5899999998654322           344555554444    44555566789999998763211     11112


Q ss_pred             ccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCcc-------ceEEe------cccccCCCCCcc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSY-------NVVVS------AEASVDANDYKV  204 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~-------~i~~~------~~~~~~~~~~~i  204 (427)
                      .|....      .+.+.+.+.    +...|+++..|.||+++........       .....      ....+..  .+.
T Consensus       156 ~y~asK------aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~  227 (263)
T PRK08339        156 LSNVVR------ISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLG--RLG  227 (263)
T ss_pred             hhHHHH------HHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcc--cCc
Confidence            121111      122333333    3357899999999976542110000       00000      0001111  256


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..+|||.+++.+++.... ..|..+.+.++.
T Consensus       228 ~p~dva~~v~fL~s~~~~~itG~~~~vdgG~  258 (263)
T PRK08339        228 EPEEIGYLVAFLASDLGSYINGAMIPVDGGR  258 (263)
T ss_pred             CHHHHHHHHHHHhcchhcCccCceEEECCCc
Confidence            899999999998875333 356777776664

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.53  E-value=7.4e-13  Score=127.98  Aligned_cols=212  Identities=14%  Similarity=0.055  Sum_probs=132.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||++++++|+++|++|+++.|+.+....+......       ...++.++.+|++|.+++.++++  
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-------AGPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-------hCCceEEEECCCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999987654433221111       01234578999999998888765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++...   .-.+||++||......     .....
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~-----~~~~~  155 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP-----MPMQA  155 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----CCCcc
Confidence                 4699999997543211           3458888999998887542   1258898887652111     01111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCC-C-CCCCccceEE---ecccccCCCCCcccHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTED-F-SPESSYNVVV---SAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~-~-~~~~~~~i~~---~~~~~~~~~~~~i~v~DVA~~  212 (427)
                           .|...+ .+.+.+.+.+.    ..|++++.++||.+.+ . .......-..   .....+..  .+++.+|+|+.
T Consensus       156 -----~Y~asK-~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  227 (264)
T PRK07576        156 -----HVCAAK-AGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLK--RNGTKQDIANA  227 (264)
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCC--CCCCHHHHHHH
Confidence                 222221 23455555443    4679999999996542 1 1000000000   00001111  36789999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.++..+.. ..|..+.+.++.
T Consensus       228 ~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        228 ALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             HHHHcChhhcCccCCEEEECCCc
Confidence            9999875332 356777776663

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.52  E-value=4e-13  Score=126.44  Aligned_cols=205  Identities=16%  Similarity=0.130  Sum_probs=132.6

Q ss_pred             EEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC---cCE
Q 044905            8 FVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN---AGK   84 (427)
Q Consensus         8 lItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g---~d~   84 (427)
                      +||||||++|+++++.|+++|++|+++.|+++....+.....        ...++.++.+|++|.+++.+++..   +|.
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~   72 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG--------GGAPVRTAALDITDEAAVDAFFAEAGPFDH   72 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--------cCCceEEEEccCCCHHHHHHHHHhcCCCCE
Confidence            699999999999999999999999999998765444322110        013456899999999999988864   799


Q ss_pred             EEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccc
Q 044905           85 VVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQP  153 (427)
Q Consensus        85 Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~  153 (427)
                      +||++|.....+           .+++|+.+..+++++....+.++||++||.+.+...     .+..     .|+..+ 
T Consensus        73 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----~~~~-----~Y~~sK-  141 (230)
T PRK07041         73 VVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----ASGV-----LQGAIN-  141 (230)
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----Ccch-----HHHHHH-
Confidence            999998654321           456777788888886666667899999877643211     1111     232222 


Q ss_pred             ccHHHHHHHHh-c-CCCeEEEEeCCCCCCCCCCCccceEEec------ccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          154 LTVPEFLQKVI-E-TDVSYTFIKTSLTEDFSPESSYNVVVSA------EASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       154 l~~E~~l~~l~-~-~gl~~tilRPG~~~~~~~~~~~~i~~~~------~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      ...+.+.+.+. + .+++++.++||.+..........-....      ...+..  ...+.+|||+++..++.+. ...|
T Consensus       142 ~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~l~~~~-~~~G  218 (230)
T PRK07041        142 AALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPAR--RVGQPEDVANAILFLAANG-FTTG  218 (230)
T ss_pred             HHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhcCC-CcCC
Confidence            23455555544 2 3588999999965432110000000000      000111  2457899999999988753 3457


Q ss_pred             cEEEEecCC
Q 044905          226 KVVKVFTDP  234 (427)
Q Consensus       226 ~~~nI~~~~  234 (427)
                      ..|++.++.
T Consensus       219 ~~~~v~gg~  227 (230)
T PRK07041        219 STVLVDGGH  227 (230)
T ss_pred             cEEEeCCCe
Confidence            888888764

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.2e-12  Score=125.11  Aligned_cols=212  Identities=15%  Similarity=0.092  Sum_probs=129.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||+|+||+++++.|++.|++|++.. |+......+......       ...++..+.+|++|.+++..+++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   74 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-------NGGSAFSIGANLESLHGVEALYS   74 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-------cCCceEEEecccCCHHHHHHHHH
Confidence            3467999999999999999999999999998875 444443333221100       01234578899999776654332


Q ss_pred             -------------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccC
Q 044905           81 -------------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        81 -------------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~  134 (427)
                                   ++|++||++|.....+           .+++|+.++..+++++...  ...+||++||.+....   
T Consensus        75 ~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---  151 (252)
T PRK12747         75 SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRIS---  151 (252)
T ss_pred             HHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccC---
Confidence                         5899999999643221           4458888888888877653  2358999988763211   


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-cceEEe---cccccCCCCCcccH
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-YNVVVS---AEASVDANDYKVAK  206 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-~~i~~~---~~~~~~~~~~~i~v  206 (427)
                        ..+..     .|+.+| .+.+.+.+.+    ...|+++..|.||++........ ..-...   ....+..  .+.+.
T Consensus       152 --~~~~~-----~Y~~sK-aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  221 (252)
T PRK12747        152 --LPDFI-----AYSMTK-GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFN--RLGEV  221 (252)
T ss_pred             --CCCch-----hHHHHH-HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCccc--CCCCH
Confidence              11112     233222 2344444443    35689999999996644221100 000000   0000111  36789


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|||+++..+++.... ..|..+.+.++
T Consensus       222 ~dva~~~~~l~s~~~~~~~G~~i~vdgg  249 (252)
T PRK12747        222 EDIADTAAFLASPDSRWVTGQLIDVSGG  249 (252)
T ss_pred             HHHHHHHHHHcCccccCcCCcEEEecCC
Confidence            9999999988864322 35677777655

>PRK09242 tropinone reductase; Provisional

Probab=99.52  E-value=1.3e-12  Score=125.38  Aligned_cols=216  Identities=12%  Similarity=0.067  Sum_probs=133.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+....+......     .....++.++.+|+.|.+++..+++ 
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAE-----EFPEREVHGLAADVSDDEDRRAILDW   81 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----hCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999987665444322111     0001345688999999888766554 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+.+|+.+..++++++.    +.+..++|++||.+.+.+.     .+
T Consensus        82 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~  156 (257)
T PRK09242         82 VEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV-----RS  156 (257)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----CC
Confidence                  5799999999743221           45677888888887764    4566789999887532211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceE--EecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVV--VSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~--~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ...|.     ..+ ...+.+.+.+    ...+++++.++||++............  ...........-+.+.+||+.++
T Consensus       157 ~~~Y~-----~sK-~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  230 (257)
T PRK09242        157 GAPYG-----MTK-AALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAV  230 (257)
T ss_pred             CcchH-----HHH-HHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            12222     111 1234444433    356899999999966432211000000  00000000001245789999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ..++..... ..|..+.+.++
T Consensus       231 ~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        231 AFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             HHHhCcccccccCCEEEECCC
Confidence            988864322 35777777654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.52  E-value=1.2e-12  Score=125.71  Aligned_cols=213  Identities=15%  Similarity=0.123  Sum_probs=130.6

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+..++++||||||+||+++++.|+++|++|+++.|+... .........       ...++.++.+|++|.+++..++.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~   74 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCG-------RGHRCTAVVADVRDPASVAAAIK   74 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHH-------hCCceEEEECCCCCHHHHHHHHH
Confidence            3556899999999999999999999999999999998642 111111110       01245688999999998887765


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ..|+|||++|....++           .+++|+.+..++++++..    .+..+||++||+....    ....
T Consensus        75 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~  150 (263)
T PRK08226         75 RAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDM----VADP  150 (263)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcc----cCCC
Confidence                   5799999999643322           356777888888887653    4567899888764210    0001


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-----c-e--EEec--ccccCCCCCcc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-----N-V--VVSA--EASVDANDYKV  204 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-----~-i--~~~~--~~~~~~~~~~i  204 (427)
                      +..     .|...+ .+.+.+.+.+.    ..++++..++||.+.........     . .  ....  ...+..  .+.
T Consensus       151 ~~~-----~Y~~sK-~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~  222 (263)
T PRK08226        151 GET-----AYALTK-AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLR--RLA  222 (263)
T ss_pred             Ccc-----hHHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCC--CCC
Confidence            111     122221 12344444333    45899999999965432110000     0 0  0000  001111  256


Q ss_pred             cHHHHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          205 AKSQIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      +.+|+|+++..++.... ...|..+.+.++
T Consensus       223 ~~~~va~~~~~l~~~~~~~~~g~~i~~dgg  252 (263)
T PRK08226        223 DPLEVGELAAFLASDESSYLTGTQNVIDGG  252 (263)
T ss_pred             CHHHHHHHHHHHcCchhcCCcCceEeECCC
Confidence            89999999988876432 235666667655

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.51  E-value=1.5e-12  Score=124.91  Aligned_cols=210  Identities=10%  Similarity=0.069  Sum_probs=130.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||++++++|+++|++|+++.|+...  .+......       ...++.++.+|++|.+++.++++ 
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~--~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   76 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAP--ETQAQVEA-------LGRKFHFITADLIQQKDIDSIVSQ   76 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHH--HHHHHHHH-------cCCeEEEEEeCCCCHHHHHHHHHH
Confidence            345789999999999999999999999999998886431  11111000       01345689999999998888765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            +.|++||++|.....+           .+++|+.+...+++++..    .+ -.+||++||...+.+.     .
T Consensus        77 ~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----~  151 (251)
T PRK12481         77 AVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-----I  151 (251)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-----C
Confidence                  5799999999654321           467888888878776643    33 3689999887632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccc--eEEec--ccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYN--VVVSA--EASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~--i~~~~--~~~~~~~~~~i~v~DVA  210 (427)
                      ....|.     .++ .+.+.+.+.    +...|+++..++||++..........  .....  ...+..  .+...+|||
T Consensus       152 ~~~~Y~-----asK-~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~peeva  223 (251)
T PRK12481        152 RVPSYT-----ASK-SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPAS--RWGTPDDLA  223 (251)
T ss_pred             CCcchH-----HHH-HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCC--CCcCHHHHH
Confidence            112222     221 223333333    33578999999999765422111000  00000  001111  367899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++..+++.... ..|..+.+.++
T Consensus       224 ~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        224 GPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             HHHHHHhCccccCcCCceEEECCC
Confidence            999999875332 35677766554

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.51  E-value=6.1e-13  Score=126.46  Aligned_cols=210  Identities=12%  Similarity=0.108  Sum_probs=128.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++|||++|+||.++++.|+++|++|+++.|+..+...+......       ...++.++.+|++|.+++.++++ 
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   75 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA-------LGTEVRGYAANVTDEEDVEATFAQ   75 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999997655443221111       02345678999999888776554 


Q ss_pred             ------CcCEEEEccCCCCCCC--------------------CccccHHHHHHHHHHHH----Hc-CCCeEEEEeccccc
Q 044905           81 ------NAGKVVVTIGPTEDGP--------------------TSEVSTSDAFQVIQAAQ----LA-GVGHVAIIYDGNTT  129 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~--------------------~~~vn~~~~~~ll~Aa~----~~-gVk~~V~vSSs~v~  129 (427)
                            ++|+|||++|......                    .+.+|+.++..+++++.    +. .-..++++||.+.+
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~  155 (253)
T PRK08217         76 IAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA  155 (253)
T ss_pred             HHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc
Confidence                  4799999998533110                    23456666665555433    22 23467878776543


Q ss_pred             ccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCc
Q 044905          130 AASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYK  203 (427)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~  203 (427)
                      +..      +...     |...+ .+.+.+.+.+.    ..+++++.++||.+.........+-...  ....+..  .+
T Consensus       156 ~~~------~~~~-----Y~~sK-~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~  221 (253)
T PRK08217        156 GNM------GQTN-----YSASK-AGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVG--RL  221 (253)
T ss_pred             CCC------CCch-----hHHHH-HHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcC--CC
Confidence            211      1122     22222 22444444433    4689999999996543211100000000  0011111  35


Q ss_pred             ccHHHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      .+.+|+|+++..++.. ....|.+|++.++
T Consensus       222 ~~~~~~a~~~~~l~~~-~~~~g~~~~~~gg  250 (253)
T PRK08217        222 GEPEEIAHTVRFIIEN-DYVTGRVLEIDGG  250 (253)
T ss_pred             cCHHHHHHHHHHHHcC-CCcCCcEEEeCCC
Confidence            7899999999988864 3347889998876

>PRK07069 short chain dehydrogenase; Validated

Probab=99.51  E-value=1.8e-12  Score=123.44  Aligned_cols=210  Identities=11%  Similarity=0.083  Sum_probs=126.3

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      +|+||||+|+||.++++.|+++|++|+++.|+ .+.+..+.......     .....+..+.+|++|.+++.+++.    
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAA-----HGEGVAFAAVQDVTDEAQWQALLAQAAD   75 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc-----CCCceEEEEEeecCCHHHHHHHHHHHHH
Confidence            48999999999999999999999999999998 44444443211100     000112357899999998877664    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHH----HHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTS----DAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~----~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                         ++|+|||++|....+.           .+++|+.    .+.+++.+++..+.++||++||...+.+..     +...
T Consensus        76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----~~~~  150 (251)
T PRK07069         76 AMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-----DYTA  150 (251)
T ss_pred             HcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-----CCch
Confidence               5799999998754322           2345554    666777888877888999998876432211     1122


Q ss_pred             cchhhhhccccccHHHHHHHHh----c--CCCeEEEEeCCCCCCCCCCCccc-eEEe------cccccCCCCCcccHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----E--TDVSYTFIKTSLTEDFSPESSYN-VVVS------AEASVDANDYKVAKSQI  209 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~--~gl~~tilRPG~~~~~~~~~~~~-i~~~------~~~~~~~~~~~i~v~DV  209 (427)
                      |     +..+ ...+.+.+.+.    .  .+++++.++||++.......... +...      ....+..  .+.+.+|+
T Consensus       151 Y-----~~sK-~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v  222 (251)
T PRK07069        151 Y-----NASK-AAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLG--RLGEPDDV  222 (251)
T ss_pred             h-----HHHH-HHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCC--CCcCHHHH
Confidence            2     2221 12333433332    2  35889999999654422100000 0000      0001111  35689999


Q ss_pred             HHHHHHHhcCcccc-cCcEEEEecC
Q 044905          210 ASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      |++++.++..+..+ .|..+.+.++
T Consensus       223 a~~~~~l~~~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        223 AHAVLYLASDESRFVTGAELVIDGG  247 (251)
T ss_pred             HHHHHHHcCccccCccCCEEEECCC
Confidence            99999887654333 4566666544

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.51  E-value=1.1e-12  Score=126.00  Aligned_cols=205  Identities=14%  Similarity=0.140  Sum_probs=129.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..++|+||||||+||+++++.|+++|++|+++.|+....  .              ..++.++.+|+.|.+++..++  
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~--------------~~~~~~~~~D~~~~~~~~~~~~~   70 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--L--------------PEGVEFVAADLTTAEGCAAVARA   70 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--c--------------CCceeEEecCCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999986421  1              123458999999998776554  


Q ss_pred             -----cCcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           80 -----GNAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        80 -----~g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                           .++|+|||++|....  +.           .+++|+.++.++++++    ++.+..++|++||...+..    ..
T Consensus        71 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~----~~  146 (260)
T PRK06523         71 VLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP----LP  146 (260)
T ss_pred             HHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC----CC
Confidence                 468999999985321  10           3457777777775544    4456678999987763211    01


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ce------EEec---------cccc
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NV------VVSA---------EASV  197 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i------~~~~---------~~~~  197 (427)
                      .+...     |...+ ...+.+.+.+.    ..|+++.+|+||.+......... ..      ....         ...+
T Consensus       147 ~~~~~-----Y~~sK-~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  220 (260)
T PRK06523        147 ESTTA-----YAAAK-AALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP  220 (260)
T ss_pred             CCcch-----hHHHH-HHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc
Confidence            11122     22221 22344444433    56899999999966442210000 00      0000         0011


Q ss_pred             CCCCCcccHHHHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          198 DANDYKVAKSQIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       198 ~~~~~~i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      ..  .+...+|||+++..++++.. ...|..+.+.++.
T Consensus       221 ~~--~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~  256 (260)
T PRK06523        221 LG--RPAEPEEVAELIAFLASDRAASITGTEYVIDGGT  256 (260)
T ss_pred             cC--CCCCHHHHHHHHHHHhCcccccccCceEEecCCc
Confidence            11  25688999999999887532 3457888887764

>PRK08324 short chain dehydrogenase; Validated

Probab=99.51  E-value=8.1e-13  Score=144.49  Aligned_cols=211  Identities=17%  Similarity=0.198  Sum_probs=137.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+....+......        ..++.++.+|++|.+++.++++  
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~--------~~~v~~v~~Dvtd~~~v~~~~~~~  492 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG--------PDRALGVACDVTDEAAVQAAFEEA  492 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc--------cCcEEEEEecCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999998765444321100        0245689999999998877764  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCC-CeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGV-GHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gV-k~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|+|||++|....++           .+++|+.+..++++++.    ..+. .+||++||.....+.     .+
T Consensus       493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-----~~  567 (681)
T PRK08324        493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-----PN  567 (681)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-----CC
Confidence                 6899999999654332           35677788888866664    4454 689999887532211     01


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCC--CCCC-CC-C------ccceEEe------cccccCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLT--EDFS-PE-S------SYNVVVS------AEASVDA  199 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~--~~~~-~~-~------~~~i~~~------~~~~~~~  199 (427)
                      ..     .|+.++ .+.+.+.+.+.    ..|+++++++||.+  +... .. +      .+++...      .......
T Consensus       568 ~~-----~Y~asK-aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~  641 (681)
T PRK08324        568 FG-----AYGAAK-AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLK  641 (681)
T ss_pred             cH-----HHHHHH-HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcC
Confidence            11     232222 23444544443    45799999999854  3211 10 0      0001000      0011111


Q ss_pred             CCCcccHHHHHHHHHHHhcC-cccccCcEEEEecCC
Q 044905          200 NDYKVAKSQIASLVADVFSN-TAVAENKVVKVFTDP  234 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~-~~~~~g~~~nI~~~~  234 (427)
                        .+++.+|||++++.++.. .....|.++++.++.
T Consensus       642 --~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~  675 (681)
T PRK08324        642 --REVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN  675 (681)
T ss_pred             --CccCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence              479999999999998852 234568899998875

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.50  E-value=1.9e-12  Score=124.24  Aligned_cols=210  Identities=11%  Similarity=0.069  Sum_probs=130.6

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcc-----------hHHHHHHHHhhhhhhhhhhhccceEEEec
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELG-----------AAQELARLAASYKILSKEELKRLNAVESN   68 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~-----------~~~~l~~~~~~~~~~~~~~~~rl~vv~gD   68 (427)
                      +..++|+||||||  .||.++++.|+++|++|+++.|++.           ....+.....       ....++.++.+|
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~D   75 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE-------SYGVRCEHMEID   75 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHH-------hcCCeEEEEECC
Confidence            4457899999995  7999999999999999999998732           1111111000       002356789999


Q ss_pred             CCCHHHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----CCCeEEEEecc
Q 044905           69 FDSAESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDG  126 (427)
Q Consensus        69 l~D~~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs  126 (427)
                      ++|.+++..+++       .+|+|||++|.....+           .+++|+.++..+++++...    +..++|++||.
T Consensus        76 ~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  155 (256)
T PRK12748         76 LSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG  155 (256)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCc
Confidence            999988777664       4799999998654322           3568888888998887543    45689999876


Q ss_pred             cccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCC-CCCccceEEecccccCCCC
Q 044905          127 NTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFS-PESSYNVVVSAEASVDAND  201 (427)
Q Consensus       127 ~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~-~~~~~~i~~~~~~~~~~~~  201 (427)
                      ..+...     .+..     .|+..+ .+.+.+.+.+.    ..+++++.++||.+.... ......... .. ....  
T Consensus       156 ~~~~~~-----~~~~-----~Y~~sK-~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~-~~-~~~~--  220 (256)
T PRK12748        156 QSLGPM-----PDEL-----AYAATK-GAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHLV-PK-FPQG--  220 (256)
T ss_pred             cccCCC-----CCch-----HHHHHH-HHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhhh-cc-CCCC--
Confidence            532110     1111     232222 23455444433    468999999999654321 111000000 00 0111  


Q ss_pred             CcccHHHHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          202 YKVAKSQIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      .+...+|+|+.+.+++.... ...+..+++.++
T Consensus       221 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             CCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            24578999999998886432 235788888665

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.50  E-value=1.3e-12  Score=125.17  Aligned_cols=213  Identities=12%  Similarity=0.118  Sum_probs=134.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||+|+||+++++.|+++|++ |+++.|+......+......       ...++.++.+|++|.+++.+++.
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-------LGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-------cCCeEEEEEccCCCHHHHHHHHH
Confidence            45678999999999999999999999998 99999987654332211100       02345678999999998887764


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                             ++|++||++|......           .+++|+.+..++++++...    + ..++|++||.+.+.+..    
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----  152 (260)
T PRK06198         77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----  152 (260)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC----
Confidence                   5799999999754321           3567777888888777542    2 35789888776432211    


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cce---E---Eec--ccccCCCCCcc
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNV---V---VSA--EASVDANDYKV  204 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i---~---~~~--~~~~~~~~~~i  204 (427)
                       ...     .|+..+ ...+.+.+.+.    ..+++++.++||.+........ ..+   .   ...  ......  .++
T Consensus       153 -~~~-----~Y~~sK-~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  223 (260)
T PRK06198        153 -FLA-----AYCASK-GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFG--RLL  223 (260)
T ss_pred             -Ccc-----hhHHHH-HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCcc--CCc
Confidence             111     222222 22444444333    4679999999985533211000 000   0   000  001111  367


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+|+|+++..++.+... ..|+.|.+.++.
T Consensus       224 ~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        224 DPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             CHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence            999999999998865432 367888887764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.49  E-value=1.9e-12  Score=123.94  Aligned_cols=208  Identities=13%  Similarity=0.073  Sum_probs=130.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      ++++||||+|+||+++++.|+++|++|+++.|+......+......       ...++.++.+|++|++++.++++    
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ-------FPGQVLTVQMDVRNPEDVQKMVEQIDE   74 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999997655444322111       01356689999999998887664    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         +.|+|||++|.....+           .+++|+.+..++++++..    .+ -.++|++||......     .....
T Consensus        75 ~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~  149 (252)
T PRK07677         75 KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA-----GPGVI  149 (252)
T ss_pred             HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC-----CCCCc
Confidence               5799999998533211           467888888889888843    22 357888876642110     01112


Q ss_pred             ccchhhhhccccccHHHHHHH----Hh-cCCCeEEEEeCCCCCCCCCCCccceEEec-------ccccCCCCCcccHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQK----VI-ETDVSYTFIKTSLTEDFSPESSYNVVVSA-------EASVDANDYKVAKSQI  209 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~----l~-~~gl~~tilRPG~~~~~~~~~~~~i~~~~-------~~~~~~~~~~i~v~DV  209 (427)
                      .|.....      +.+.+.+.    +. ..|+++..++||++.....  ...+....       ......  .+.+.+|+
T Consensus       150 ~Y~~sKa------a~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v  219 (252)
T PRK07677        150 HSAAAKA------GVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGG--ADKLWESEEAAKRTIQSVPLG--RLGTPEEI  219 (252)
T ss_pred             chHHHHH------HHHHHHHHHHHHhCcccCeEEEEEeecccccccc--cccccCCHHHHHHHhccCCCC--CCCCHHHH
Confidence            2221111      12333332    33 3589999999997753110  00010000       000111  36789999


Q ss_pred             HHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          210 ASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      |+++..++.... ...|..+.+.++.
T Consensus       220 a~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        220 AGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             HHHHHHHcCccccccCCCEEEECCCe
Confidence            999988886432 2456777776653

>PRK07985 oxidoreductase; Provisional

Probab=99.49  E-value=2.2e-12  Score=126.93  Aligned_cols=211  Identities=10%  Similarity=0.080  Sum_probs=131.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+..  ..+.+......       ...++.++.+|++|.+++.++++
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~  120 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-------CGRKAVLLPGDLSDEKFARSLVH  120 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-------cCCeEEEEEccCCCHHHHHHHHH
Confidence            3478999999999999999999999999998876543  23333221111       01245578999999988876654


Q ss_pred             -------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCC
Q 044905           81 -------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             ++|++||++|.... .+           .+++|+.++.++++++...  .-.+||++||...+...     ..
T Consensus       121 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~-----~~  195 (294)
T PRK07985        121 EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS-----PH  195 (294)
T ss_pred             HHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC-----CC
Confidence                   57999999986421 11           5678888999999888653  12589999887643211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC--cc-ceE-EecccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES--SY-NVV-VSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~--~~-~i~-~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      ...     |+..+ .+.+.+.+.+.    ..|+++..|+||.+.......  .. ... ......+..  .+...+|||.
T Consensus       196 ~~~-----Y~asK-aal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--r~~~pedva~  267 (294)
T PRK07985        196 LLD-----YAATK-AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK--RAGQPAELAP  267 (294)
T ss_pred             cch-----hHHHH-HHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCC--CCCCHHHHHH
Confidence            122     22222 22344444433    468999999999654321100  00 000 000011111  2568999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++.+++.... ..|.++.+.++
T Consensus       268 ~~~fL~s~~~~~itG~~i~vdgG  290 (294)
T PRK07985        268 VYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_pred             HHHhhhChhcCCccccEEeeCCC
Confidence            99999875332 35677777765

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.49  E-value=2.7e-12  Score=123.62  Aligned_cols=212  Identities=12%  Similarity=0.024  Sum_probs=127.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||+|+||.++++.|+++|++|+++.|+..+...+......     .....++..+.+|++|.+++.++++   
T Consensus         8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLRE-----KFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----hCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998765443322111     0001245678999999988877653   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          .+|++||++|.....+           .+++|+.+...++++    ++..+..+||++||.......     ....
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  157 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE-----PHMV  157 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-----CCch
Confidence                5799999999754322           234455555444444    444556789999887522110     1111


Q ss_pred             ccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc------eEEe--------cccccCCCCCc
Q 044905          142 SFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN------VVVS--------AEASVDANDYK  203 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~------i~~~--------~~~~~~~~~~~  203 (427)
                      .|.....      +.+.+.    ..+...|+++..+.||+++.........      ....        ....+..  .+
T Consensus       158 ~y~asKa------al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~  229 (265)
T PRK07062        158 ATSAARA------GLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLG--RL  229 (265)
T ss_pred             HhHHHHH------HHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcC--CC
Confidence            1211111      122222    2333578999999999765421100000      0000        0000111  25


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ...+|||.++..+++.... ..|.++.+.++
T Consensus       230 ~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        230 GRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             CCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            6889999999998874322 35777777665

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.49  E-value=4.8e-12  Score=122.99  Aligned_cols=198  Identities=11%  Similarity=0.113  Sum_probs=125.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ..++++||||||+||+++++.|+++|++|+++.|+......    +.....+   +. ....++.++.+|++|++++.++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---~~-~~~~~~~~~~~D~~~~~~i~~~   80 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEE---IE-AAGGQALPLVGDVRDEDQVAAA   80 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHH---HH-hcCCceEEEEecCCCHHHHHHH
Confidence            45789999999999999999999999999999998653111    1111000   00 0123566889999999988887


Q ss_pred             hc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCC
Q 044905           79 IG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                      ++       ..|+|||++|.....+           .+++|+.++.++++++..    .+-.+++++||...  . ...+
T Consensus        81 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~-~~~~  157 (273)
T PRK08278         81 VAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN--L-DPKW  157 (273)
T ss_pred             HHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh--c-cccc
Confidence            75       5899999999644322           445788899999988864    33457887876531  1 1111


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCC-CCCCCCCCCccceEEecccccCCCCCcccHHHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTS-LTEDFSPESSYNVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      ..+..     .|+.+| .+.+.+.+.+.    ..++++..+.|| +++....   ... . +......  .+...+|+|+
T Consensus       158 ~~~~~-----~Y~~sK-~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~---~~~-~-~~~~~~~--~~~~p~~va~  224 (273)
T PRK08278        158 FAPHT-----AYTMAK-YGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAV---RNL-L-GGDEAMR--RSRTPEIMAD  224 (273)
T ss_pred             cCCcc-----hhHHHH-HHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHH---Hhc-c-ccccccc--ccCCHHHHHH
Confidence            11112     233222 33555555443    458999999998 4443211   111 1 1111111  3678999999


Q ss_pred             HHHHHhcCc
Q 044905          212 LVADVFSNT  220 (427)
Q Consensus       212 ~v~~al~~~  220 (427)
                      .++.++...
T Consensus       225 ~~~~l~~~~  233 (273)
T PRK08278        225 AAYEILSRP  233 (273)
T ss_pred             HHHHHhcCc
Confidence            999988754

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.48  E-value=2.6e-12  Score=124.49  Aligned_cols=195  Identities=12%  Similarity=0.064  Sum_probs=120.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      ++++||||||+||.++++.|+++|++|+++.|+.+..+.+......      .....+.++.+|++|.+++..++.    
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~~   74 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARA------LGGTVPEHRALDISDYDAVAAFAADIHA   74 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------cCCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999987654433221110      001112357899999888776554    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----c-CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----A-GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~-gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         ++|+|||++|....+.           .+++|+.++.++++++..    . ...+||++||.....+.     ....
T Consensus        75 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-----~~~~  149 (272)
T PRK07832         75 AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-----PWHA  149 (272)
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-----CCCc
Confidence               4799999998653221           457788888888888642    2 24689999876521110     1112


Q ss_pred             ccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEec-----cc----ccCCCCCcccHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSA-----EA----SVDANDYKVAKSQ  208 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~-----~~----~~~~~~~~i~v~D  208 (427)
                      .|....      .+.+.+.+.    +...++++++++||.++....   ..+...+     +.    ........++.+|
T Consensus       150 ~Y~~sK------~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (272)
T PRK07832        150 AYSASK------FGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLV---NTVEIAGVDREDPRVQKWVDRFRGHAVTPEK  220 (272)
T ss_pred             chHHHH------HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcch---hcccccccCcchhhHHHHHHhcccCCCCHHH
Confidence            222111      112222222    235789999999996654221   1110000     00    0000113589999


Q ss_pred             HHHHHHHHhcC
Q 044905          209 IASLVADVFSN  219 (427)
Q Consensus       209 VA~~v~~al~~  219 (427)
                      +|+.++.++..
T Consensus       221 vA~~~~~~~~~  231 (272)
T PRK07832        221 AAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHHhc
Confidence            99999999863

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.48  E-value=3.9e-12  Score=121.22  Aligned_cols=193  Identities=13%  Similarity=0.136  Sum_probs=122.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCC--CHHHHHH---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFD--SAESIAK---   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~--D~~sl~~---   77 (427)
                      +.++|+||||+|++|.++++.|++.|++|++++|+......+......      ....++.++.+|++  |.+++..   
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~d~~~~~~~~~~~~~~   84 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEA------AGGPQPAIIPLDLLTATPQNYQQLAD   84 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHh------cCCCCceEEEecccCCCHHHHHHHHH
Confidence            457899999999999999999999999999999998765444322111      11234557788886  4444433   


Q ss_pred             ----HhcCcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           78 ----AIGNAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        78 ----al~g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                          .+..+|+|||++|.... .+           .+++|+.++.++++++    ...+.++||++||.....+..    
T Consensus        85 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~----  160 (247)
T PRK08945         85 TIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRA----  160 (247)
T ss_pred             HHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCC----
Confidence                33468999999986422 11           4567778877777766    456788999998765321111    


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                       ...     .|+.++ .+.+.+.+.+.    ..+++++.++||.+........    ... ..   +..+...+|+++.+
T Consensus       161 -~~~-----~Y~~sK-~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~----~~~-~~---~~~~~~~~~~~~~~  225 (247)
T PRK08945        161 -NWG-----AYAVSK-FATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA----FPG-ED---PQKLKTPEDIMPLY  225 (247)
T ss_pred             -CCc-----ccHHHH-HHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh----cCc-cc---ccCCCCHHHHHHHH
Confidence             111     222222 23445444433    4579999999996644211000    000 01   11367899999999


Q ss_pred             HHHhcCc
Q 044905          214 ADVFSNT  220 (427)
Q Consensus       214 ~~al~~~  220 (427)
                      ..++.+.
T Consensus       226 ~~~~~~~  232 (247)
T PRK08945        226 LYLMGDD  232 (247)
T ss_pred             HHHhCcc
Confidence            9988654

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.48  E-value=3.8e-13  Score=124.04  Aligned_cols=225  Identities=14%  Similarity=0.122  Sum_probs=146.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |++|||||+||.+|++|.+-+..+|+  +=.++..+                           -.+|+++......+|+.
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s---------------------------kd~DLt~~a~t~~lF~~   53 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS---------------------------KDADLTNLADTRALFES   53 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc---------------------------ccccccchHHHHHHHhc
Confidence            57999999999999999999999886  22222211                           23578888877888864


Q ss_pred             --cCEEEEccCCCCC--------CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC------CCccch
Q 044905           82 --AGKVVVTIGPTED--------GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG------ISSFFN  145 (427)
Q Consensus        82 --~d~Vi~~ag~~~~--------~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~------~~~~~~  145 (427)
                        -..|||+|+-.+.        -.+...|+...-|+|..|.++||+++|++-|++++..-...+.++      .+...+
T Consensus        54 ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN  133 (315)
T KOG1431|consen   54 EKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSN  133 (315)
T ss_pred             cCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCc
Confidence              5789998764332        114455555557899999999999999999999887755443321      222221


Q ss_pred             --hhhhccccccHHHHHHHHh-cCCCeEEEEeC----CCCCCCCCCCc------------------cceEEecccccCCC
Q 044905          146 --NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKT----SLTEDFSPESS------------------YNVVVSAEASVDAN  200 (427)
Q Consensus       146 --~~~~k~~~l~~E~~l~~l~-~~gl~~tilRP----G~~~~~~~~~~------------------~~i~~~~~~~~~~~  200 (427)
                        ..|.|.  + +.-.-+.++ +.|..+|.+-|    |..+||.++..                  ..+.+.|.+.+.+ 
T Consensus       134 ~gYsyAKr--~-idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlR-  209 (315)
T KOG1431|consen  134 FGYSYAKR--M-IDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLR-  209 (315)
T ss_pred             hHHHHHHH--H-HHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHH-
Confidence              122321  1 111113444 78999999998    35666665421                  1233444444433 


Q ss_pred             CCcccHHHHHHHHHHHhcCcccccCcEEEEecCC--CCChhhHHHHHHHHHhccchhhhHHHHH
Q 044905          201 DYKVAKSQIASLVADVFSNTAVAENKVVKVFTDP--SAPARRVDELFSAIAEDGRRAAYAEALA  262 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~--~~~~~s~~ell~~i~~~~~~~~~~~~~~  262 (427)
                       +|++.+|+|+++++++.+-+.  -+.++++.++  ..+.+.+.+++.+...-.|+..|....+
T Consensus       210 -qFiys~DLA~l~i~vlr~Y~~--vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~  270 (315)
T KOG1431|consen  210 -QFIYSDDLADLFIWVLREYEG--VEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKS  270 (315)
T ss_pred             -HHhhHhHHHHHHHHHHHhhcC--ccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCC
Confidence             699999999999999975432  3556666665  5566666666666655677777765433

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.48  E-value=3.3e-12  Score=122.83  Aligned_cols=208  Identities=12%  Similarity=0.045  Sum_probs=124.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+|+||||+|.||+.+++.|+++|++|+++.|+......+......        ..++.++.+|++|.+++.++++    
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--------~~~~~~~~~Dv~d~~~~~~~~~~~~~   72 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE--------YGEVYAVKADLSDKDDLKNLVKEAWE   72 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh--------cCCceEEEcCCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999998665444322111        1245689999999998887763    


Q ss_pred             ---CcCEEEEccCCCCCC--C-----------CccccHHHHHHH----HHHHH-HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ---NAGKVVVTIGPTEDG--P-----------TSEVSTSDAFQV----IQAAQ-LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~--~-----------~~~vn~~~~~~l----l~Aa~-~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                         ++|++||++|.....  +           ...+|+.+...+    +..+. ..+..+||++||......     ..+
T Consensus        73 ~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-----~~~  147 (259)
T PRK08340         73 LLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-----MPP  147 (259)
T ss_pred             hcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC-----CCC
Confidence               589999999964211  1           123343333333    33333 234568999988763211     111


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCC-Ccc------ceEEe----c---ccccCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPE-SSY------NVVVS----A---EASVDAND  201 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~-~~~------~i~~~----~---~~~~~~~~  201 (427)
                      ...|....      .+.+.+.+.+    ...|+++..|.||+++..... ...      .....    .   ...+..  
T Consensus       148 ~~~y~~sK------aa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--  219 (259)
T PRK08340        148 LVLADVTR------AGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLK--  219 (259)
T ss_pred             chHHHHHH------HHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCcc--
Confidence            12222111      1233333333    356899999999976542110 000      00000    0   001111  


Q ss_pred             CcccHHHHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          202 YKVAKSQIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      -+...+|||++++.+++....+ .|.++.+.++
T Consensus       220 r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg  252 (259)
T PRK08340        220 RTGRWEELGSLIAFLLSENAEYMLGSTIVFDGA  252 (259)
T ss_pred             CCCCHHHHHHHHHHHcCcccccccCceEeecCC
Confidence            2568899999999998754333 5666666665

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.48  E-value=4e-12  Score=122.42  Aligned_cols=211  Identities=12%  Similarity=0.059  Sum_probs=131.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++++||||||+||++++++|+++|++|++++|+....+.+....          ..++.++.+|++|.+++..+++ 
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   73 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----------GDHVLVVEGDVTSYADNQRAVDQ   73 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHHHH
Confidence            45679999999999999999999999999999999987655543321          1234589999999988877664 


Q ss_pred             ------CcCEEEEccCCCCC-CC---------------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCC
Q 044905           81 ------NAGKVVVTIGPTED-GP---------------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~---------------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~  135 (427)
                            .+|++||++|.... .+               .+++|+.+...+++++...   .-.++|++||...+...   
T Consensus        74 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---  150 (263)
T PRK06200         74 TVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG---  150 (263)
T ss_pred             HHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC---
Confidence                  58999999996431 10               2467777888888777532   22578888876532111   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCC-ccc-----eE-Eecc---cccCCCC-
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPES-SYN-----VV-VSAE---ASVDAND-  201 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~-~~~-----i~-~~~~---~~~~~~~-  201 (427)
                        .+..     .|+.++ .+.+.+.+.+.   ..++++..|.||++....... ...     .. ....   .....+. 
T Consensus       151 --~~~~-----~Y~~sK-~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  222 (263)
T PRK06200        151 --GGGP-----LYTASK-HAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQ  222 (263)
T ss_pred             --CCCc-----hhHHHH-HHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCC
Confidence              1111     122222 22444444433   235999999999665322110 000     00 0000   0000111 


Q ss_pred             CcccHHHHHHHHHHHhcCc-cc-ccCcEEEEecC
Q 044905          202 YKVAKSQIASLVADVFSNT-AV-AENKVVKVFTD  233 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~-~~-~~g~~~nI~~~  233 (427)
                      -+...+|||.+++.++++. .. ..|..+.+.++
T Consensus       223 r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        223 FAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             CCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence            2568999999999988744 22 35677777655

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.47  E-value=3.1e-12  Score=125.89  Aligned_cols=198  Identities=17%  Similarity=0.116  Sum_probs=125.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||.||.++++.|+++|++|+++.|+.+.+..+......        ..++..+.+|++|.+++.++++  
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--------~~~~~~~~~Dv~d~~~v~~~~~~~   79 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--------DDRVLTVVADVTDLAAMQAAAEEA   79 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--------CCcEEEEEecCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999998765554332110        1233456799999988877653  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           .+|+|||++|.....+           .+++|+.++.++++++...   ...+||++||.+.+.+.     ....
T Consensus        80 ~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  154 (296)
T PRK05872         80 VERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-----PGMA  154 (296)
T ss_pred             HHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC-----CCch
Confidence                 5899999999754322           4567888888888877542   23689999877532211     1111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce-EEe---cccccCCCCCcccHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV-VVS---AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i-~~~---~~~~~~~~~~~i~v~DVA~~v  213 (427)
                           .|+.++ ...+.+.+.+    ...|+.+..+.||++..........- ...   ...........++.+|+|+.+
T Consensus       155 -----~Y~asK-aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i  228 (296)
T PRK05872        155 -----AYCASK-AGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAF  228 (296)
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHH
Confidence                 222222 2234444433    35689999999997654221100000 000   000000011367899999999


Q ss_pred             HHHhcC
Q 044905          214 ADVFSN  219 (427)
Q Consensus       214 ~~al~~  219 (427)
                      +.++.+
T Consensus       229 ~~~~~~  234 (296)
T PRK05872        229 VDGIER  234 (296)
T ss_pred             HHHHhc
Confidence            998874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.47  E-value=1.6e-12  Score=129.42  Aligned_cols=119  Identities=14%  Similarity=0.163  Sum_probs=90.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ++++|+||||||+||.++++.|+++|++|++++|+..+...+......       ...++.++.+|++|.+++.++++  
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~   77 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-------PPDSYTIIHIDLGDLDSVRRFVDDF   77 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-------cCCceEEEEecCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999997765444321100       02356789999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCC------------CCccccHHHHHHHHHHHHH----cC--CCeEEEEecccc
Q 044905           81 -----NAGKVVVTIGPTEDG------------PTSEVSTSDAFQVIQAAQL----AG--VGHVAIIYDGNT  128 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~------------~~~~vn~~~~~~ll~Aa~~----~g--Vk~~V~vSSs~v  128 (427)
                           .+|+|||++|.....            ..+++|+.++.++++++..    .+  ..+||++||.+.
T Consensus        78 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~  148 (322)
T PRK07453         78 RALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTA  148 (322)
T ss_pred             HHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEccccc
Confidence                 389999999954211            1467888888888777654    33  359999998764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.46  E-value=3.7e-12  Score=122.67  Aligned_cols=211  Identities=14%  Similarity=0.079  Sum_probs=131.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++++||||||+||+++++.|+++|++|+++.|+.+.++.+....          ..++..+.+|+.|.+++.++++ 
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   72 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH----------GDAVVGVEGDVRSLDDHKEAVAR   72 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc----------CCceEEEEeccCCHHHHHHHHHH
Confidence            45679999999999999999999999999999999876655553311          1234578999999888777664 


Q ss_pred             ------CcCEEEEccCCCCC-------C---------CCccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCC
Q 044905           81 ------NAGKVVVTIGPTED-------G---------PTSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-------~---------~~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~  135 (427)
                            .+|++||++|....       .         ..+++|+.++.++++++...   .-.++|+++|+.....    
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~----  148 (262)
T TIGR03325        73 CVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP----  148 (262)
T ss_pred             HHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC----
Confidence                  57999999985321       0         14678888899998888653   1246888876652111    


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh-c--CCCeEEEEeCCCCCCCCCCC-ccce--------EEecccccCCCC-C
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI-E--TDVSYTFIKTSLTEDFSPES-SYNV--------VVSAEASVDAND-Y  202 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~--~gl~~tilRPG~~~~~~~~~-~~~i--------~~~~~~~~~~~~-~  202 (427)
                       .....     .|+.++ .+.+.+.+.+. +  ..+++..|.||++....... ...+        ..........++ .
T Consensus       149 -~~~~~-----~Y~~sK-aa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r  221 (262)
T TIGR03325       149 -NGGGP-----LYTAAK-HAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGR  221 (262)
T ss_pred             -CCCCc-----hhHHHH-HHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCC
Confidence             01111     222222 23455555444 2  23889999999664321110 0000        000000000111 2


Q ss_pred             cccHHHHHHHHHHHhcCcc-c-ccCcEEEEecC
Q 044905          203 KVAKSQIASLVADVFSNTA-V-AENKVVKVFTD  233 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~-~-~~g~~~nI~~~  233 (427)
                      +.+.+|||++++.++++.. . ..|.++.+.++
T Consensus       222 ~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       222 MPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             CCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence            5688999999988887532 2 36777777665

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.46  E-value=2e-12  Score=127.66  Aligned_cols=121  Identities=15%  Similarity=0.098  Sum_probs=88.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.++..........     .....++.++.+|++|.+++.+++.  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITA-----ATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----hCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999987654432211100     0001346688999999998887664  


Q ss_pred             -----CcCEEEEccCCCCCC---------CCccccHHH----HHHHHHHHHHcCCCeEEEEecccc
Q 044905           81 -----NAGKVVVTIGPTEDG---------PTSEVSTSD----AFQVIQAAQLAGVGHVAIIYDGNT  128 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~---------~~~~vn~~~----~~~ll~Aa~~~gVk~~V~vSSs~v  128 (427)
                           ++|+|||++|.....         ..+++|+.+    +..++..++..+.++||++||.+.
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  155 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGH  155 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHH
Confidence                 589999999864321         145678777    555666666667789999998763

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.46  E-value=4e-12  Score=120.31  Aligned_cols=201  Identities=13%  Similarity=0.146  Sum_probs=123.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++++||||+|+||+++++.|+++|++|+++.|++... ..+...             ++.++.+|++|.+++.++++  
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~   68 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA-------------GAQCIQADFSTNAGIMAFIDEL   68 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-------------CCEEEEcCCCCHHHHHHHHHHH
Confidence            56899999999999999999999999999999987542 222111             23578999999988877653  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC--CCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG--VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g--Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|++||++|....+.           .+++|+.+...+.+++..    .+  ..++|++||.....+     ..
T Consensus        69 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----~~  143 (236)
T PRK06483         69 KQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----SD  143 (236)
T ss_pred             HhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----CC
Confidence                 4899999998643221           345666666655555433    33  457898876642111     01


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCC-CCCCC-ccceEEecccccCCCCCcccHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTED-FSPES-SYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~-~~~~~-~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ...     .|+.++ .+.+.+.+.+.   ..++++..|.||++.. ..... ......  ...+..  -....+|||+++
T Consensus       144 ~~~-----~Y~asK-aal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~va~~~  213 (236)
T PRK06483        144 KHI-----AYAASK-AALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKAL--AKSLLK--IEPGEEEIIDLV  213 (236)
T ss_pred             CCc-----cHHHHH-HHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHh--ccCccc--cCCCHHHHHHHH
Confidence            112     222222 23555555444   2359999999995421 11100 000000  011111  145789999999


Q ss_pred             HHHhcCcccccCcEEEEecC
Q 044905          214 ADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~  233 (427)
                      ..+++. ....|..+.+.++
T Consensus       214 ~~l~~~-~~~~G~~i~vdgg  232 (236)
T PRK06483        214 DYLLTS-CYVTGRSLPVDGG  232 (236)
T ss_pred             HHHhcC-CCcCCcEEEeCcc
Confidence            998863 3346777777665

>PRK05855 short chain dehydrogenase; Validated

Probab=99.46  E-value=4e-12  Score=135.41  Aligned_cols=197  Identities=16%  Similarity=0.131  Sum_probs=128.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|+++.|+.++.+.+.......       ..++.++.+|++|++++.++++ 
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~~~~~~~~  385 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA-------GAVAHAYRVDVSDADAMEAFAEW  385 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------CCeEEEEEcCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999987655543321110       1245689999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcC-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|++||++|....++           .+++|+.++.++++++.    +.+ -.+||++||.+.+.+.     .
T Consensus       386 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~  460 (582)
T PRK05855        386 VRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-----R  460 (582)
T ss_pred             HHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-----C
Confidence                  4799999999754322           45588888888887653    334 3589999987643221     1


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEeccc-----------ccCCCCCc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEA-----------SVDANDYK  203 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~  203 (427)
                      +...     |+.+| .+.+.+.+.    +...|++++.|.||+++.....   .....+..           ........
T Consensus       461 ~~~~-----Y~~sK-aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (582)
T PRK05855        461 SLPA-----YATSK-AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVA---TTRFAGADAEDEARRRGRADKLYQRRG  531 (582)
T ss_pred             CCcH-----HHHHH-HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchh---ccccCCcccchhhhHHhhhhhhccccC
Confidence            1222     22222 223344333    3356899999999977542211   10000100           00001123


Q ss_pred             ccHHHHHHHHHHHhcC
Q 044905          204 VAKSQIASLVADVFSN  219 (427)
Q Consensus       204 i~v~DVA~~v~~al~~  219 (427)
                      ++.+|+|+.++.++..
T Consensus       532 ~~p~~va~~~~~~~~~  547 (582)
T PRK05855        532 YGPEKVAKAIVDAVKR  547 (582)
T ss_pred             CCHHHHHHHHHHHHHc
Confidence            5789999999999874

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.46  E-value=3.4e-12  Score=138.70  Aligned_cols=190  Identities=15%  Similarity=0.144  Sum_probs=127.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||.++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++.++++ 
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~~~~~~~~  441 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-------KGGTAHAYTCDLTDSAAVDHTVKD  441 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999998765544332111       01345689999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                            ++|++||++|......             .+++|+.++.++++++    ++.+..+||++||.+.+.+..    
T Consensus       442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----  517 (657)
T PRK07201        442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP----  517 (657)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC----
Confidence                  5899999999642211             3457777777776654    456778999999876432211    


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                       ....     |+.++ .+.+.+.+.+.    ..|++++.|+||++.....   ...      ........++.+++|+.+
T Consensus       518 -~~~~-----Y~~sK-~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~---~~~------~~~~~~~~~~~~~~a~~i  581 (657)
T PRK07201        518 -RFSA-----YVASK-AALDAFSDVAASETLSDGITFTTIHMPLVRTPMI---APT------KRYNNVPTISPEEAADMV  581 (657)
T ss_pred             -Ccch-----HHHHH-HHHHHHHHHHHHHHHhhCCcEEEEECCcCccccc---Ccc------ccccCCCCCCHHHHHHHH
Confidence             1122     22222 22444444433    4689999999997654221   000      001112367899999999


Q ss_pred             HHHhc
Q 044905          214 ADVFS  218 (427)
Q Consensus       214 ~~al~  218 (427)
                      +..+.
T Consensus       582 ~~~~~  586 (657)
T PRK07201        582 VRAIV  586 (657)
T ss_pred             HHHHH
Confidence            98775

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.46  E-value=3.2e-12  Score=120.29  Aligned_cols=157  Identities=12%  Similarity=0.177  Sum_probs=105.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      |++++||||||++|+++++.|+++|++|++++|++.....+...            .++.++.+|++|.+++.+++.   
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~------------~~~~~~~~D~~d~~~~~~~~~~~~   68 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL------------PGVHIEKLDMNDPASLDQLLQRLQ   68 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhc------------cccceEEcCCCCHHHHHHHHHHhh
Confidence            56899999999999999999999999999999998765444221            234578899999988877765   


Q ss_pred             --CcCEEEEccCCCCCC-------------CCccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGPTEDG-------------PTSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~-------------~~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        ++|+|||++|.....             ..+.+|+.++.++++++...   +..+++++||..  +........+.+.
T Consensus        69 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~~~~~~~~~  146 (225)
T PRK08177         69 GQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVELPDGGEMPL  146 (225)
T ss_pred             cCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--cccccCCCCCccc
Confidence              589999999864321             14567777888888877542   335677776543  1111111111222


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCC
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTED  180 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~  180 (427)
                           |+..+ .+.+.+.+.+.    ..++.++.++||++..
T Consensus       147 -----Y~~sK-~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t  182 (225)
T PRK08177        147 -----YKASK-AALNSMTRSFVAELGEPTLTVLSMHPGWVKT  182 (225)
T ss_pred             -----hHHHH-HHHHHHHHHHHHHhhcCCeEEEEEcCCceec
Confidence                 22222 23444444443    4679999999997755

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.45  E-value=1.8e-12  Score=123.55  Aligned_cols=206  Identities=12%  Similarity=0.132  Sum_probs=121.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |++|+||||||+||+.|++.|+++|++|++++|++. ....+...          ...++.++.+|++|.+++.++++.+
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~   70 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ----------YNSNLTFHSLDLQDVHELETNFNEI   70 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc----------cCCceEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999873 22222110          0235668999999999988877532


Q ss_pred             ---------C--EEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHc-CCCeEEEEecccccccccC
Q 044905           83 ---------G--KVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLA-GVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        83 ---------d--~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~-gVk~~V~vSSs~v~~~~~~  134 (427)
                               +  ++||++|.... .+           .+++|+.+...+++++    +.. +.++||++||.....    
T Consensus        71 ~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----  146 (251)
T PRK06924         71 LSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN----  146 (251)
T ss_pred             HHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC----
Confidence                     1  68888876422 11           3455666655555444    333 346899998765311    


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEEec-----c-cccCCCCC
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVVSA-----E-ASVDANDY  202 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~~~-----~-~~~~~~~~  202 (427)
                          +.+..  ..|+..+ .+.+.+.+.+.      ..++++..|+||++...............     . ......-.
T Consensus       147 ----~~~~~--~~Y~~sK-aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (251)
T PRK06924        147 ----PYFGW--SAYCSSK-AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGK  219 (251)
T ss_pred             ----CCCCc--HHHhHHH-HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCC
Confidence                11111  1232222 23444444332      35799999999965432110000000000     0 00000013


Q ss_pred             cccHHHHHHHHHHHhcCcccccCcEEEE
Q 044905          203 KVAKSQIASLVADVFSNTAVAENKVVKV  230 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~~~g~~~nI  230 (427)
                      +.+.+|+|+.++.++.+.....|..+.+
T Consensus       220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v  247 (251)
T PRK06924        220 LLSPEYVAKALRNLLETEDFPNGEVIDI  247 (251)
T ss_pred             cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence            6899999999999987533334555444

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.45  E-value=9.6e-12  Score=116.83  Aligned_cols=192  Identities=13%  Similarity=0.119  Sum_probs=126.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---c
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---G   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---~   80 (427)
                      |++++||||||++|++++++|+++|++|++++|+++..+.+...+             ++++.+|++|.+.+..++   .
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~-------------~~~~~~D~~~~~~v~~~~~~~~   67 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALG-------------AEALALDVADPASVAGLAWKLD   67 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhcc-------------ceEEEecCCCHHHHHHHHHHhc
Confidence            568999999999999999999999999999999977655553322             247899999999888754   2


Q ss_pred             --CcCEEEEccCCCCC--C-----------CCccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGPTED--G-----------PTSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~--~-----------~~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        .+|+|||++|....  .           ..+++|+.++.++++++..   .+-.+++++||.....+....  .+.. 
T Consensus        68 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~~~-  144 (222)
T PRK06953         68 GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATG--TTGW-  144 (222)
T ss_pred             CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccC--CCcc-
Confidence              48999999987521  1           1567888899999888864   223468888776422221100  0101 


Q ss_pred             cchhhhhccccccHHHHHHHHh--cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC-
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI--ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN-  219 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~--~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~-  219 (427)
                          .|...+ ...+.+.+.+.  ..+++++.++||+++....   .            ..+.+..++.+..+..++.. 
T Consensus       145 ----~Y~~sK-~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~---~------------~~~~~~~~~~~~~~~~~~~~~  204 (222)
T PRK06953        145 ----LYRASK-AALNDALRAASLQARHATCIALHPGWVRTDMG---G------------AQAALDPAQSVAGMRRVIAQA  204 (222)
T ss_pred             ----ccHHhH-HHHHHHHHHHhhhccCcEEEEECCCeeecCCC---C------------CCCCCCHHHHHHHHHHHHHhc
Confidence                122222 23455555544  2478999999997654211   0            01256888999988887653 


Q ss_pred             cccccCcEEEEe
Q 044905          220 TAVAENKVVKVF  231 (427)
Q Consensus       220 ~~~~~g~~~nI~  231 (427)
                      +....+..|...
T Consensus       205 ~~~~~~~~~~~~  216 (222)
T PRK06953        205 TRRDNGRFFQYD  216 (222)
T ss_pred             CcccCceEEeeC
Confidence            223345555543

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.44  E-value=6.2e-12  Score=118.74  Aligned_cols=203  Identities=13%  Similarity=0.130  Sum_probs=127.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al~   80 (427)
                      ++.++++||||+|+||+++++.|+++|++|+++.|+....  .              ..++.++.+|++|. +.+.+.+.
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~--------------~~~~~~~~~D~~~~~~~~~~~~~   66 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--L--------------SGNFHFLQLDLSDDLEPLFDWVP   66 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--c--------------CCcEEEEECChHHHHHHHHHhhC
Confidence            3457899999999999999999999999999999986421  0              12345889999997 55555667


Q ss_pred             CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCCCccc
Q 044905           81 NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                      .+|+|||++|.... .+           .+++|+.++.++++++..    .+.++||++||.....+.     .....|.
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~  141 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG-----GGGAAYT  141 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----CCCcccH
Confidence            89999999985321 11           356777888888887753    445689999876532111     1111122


Q ss_pred             hhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccc-eEE-ec--ccccCCCCCcccHHHHHHHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYN-VVV-SA--EASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~-i~~-~~--~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           ..+ ...+.+.+.    +...|+++++++||.++......... -.. ..  ...+..  .+...+|+|++++.+
T Consensus       142 -----~sK-~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~~l  213 (235)
T PRK06550        142 -----ASK-HALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIK--RWAEPEEVAELTLFL  213 (235)
T ss_pred             -----HHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcC--CCCCHHHHHHHHHHH
Confidence                 111 123333333    33568999999999654322110000 000 00  001111  367899999999999


Q ss_pred             hcCcc-cccCcEEEEecC
Q 044905          217 FSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~-~~~g~~~nI~~~  233 (427)
                      +.+.. ...+.++.+.++
T Consensus       214 ~s~~~~~~~g~~~~~~gg  231 (235)
T PRK06550        214 ASGKADYMQGTIVPIDGG  231 (235)
T ss_pred             cChhhccCCCcEEEECCc
Confidence            87532 235677766655

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.1e-11  Score=119.09  Aligned_cols=212  Identities=15%  Similarity=0.104  Sum_probs=130.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+|||++|.+|.++++.|+++|++|+++.|+..+...+......      ....++.++.+|++|.+++..+++  
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA------AHGVDVAVHALDLSSPEAREQLAAEA   79 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh------hcCCceEEEEecCCCHHHHHHHHHHh
Confidence            457999999999999999999999999999999998765443321110      001345688999999998887664  


Q ss_pred             -CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCCccc
Q 044905           81 -NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                       .+|++||++|.....+           .+++|+.+...+++++    .+.+-.++|++||..-  .   ........|.
T Consensus        80 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~--~---~~~~~~~~y~  154 (259)
T PRK06125         80 GDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAG--E---NPDADYICGS  154 (259)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccc--c---CCCCCchHhH
Confidence             5899999998654322           3456777777777765    3444467888876642  1   1001111111


Q ss_pred             hhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc---ce-EEecc--------cccCCCCCcccHHH
Q 044905          145 NNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY---NV-VVSAE--------ASVDANDYKVAKSQ  208 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~---~i-~~~~~--------~~~~~~~~~i~v~D  208 (427)
                      .   ++   .+.+.+.+.+    ...|+++..+.||.+.........   .. ....+        ..+..  .+.+.+|
T Consensus       155 a---sk---~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  226 (259)
T PRK06125        155 A---GN---AALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLG--RPATPEE  226 (259)
T ss_pred             H---HH---HHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcC--CCcCHHH
Confidence            1   11   1133333333    356899999999966532100000   00 00000        00111  3568999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|++++.++.+... ..|..+.+.++
T Consensus       227 va~~~~~l~~~~~~~~~G~~i~vdgg  252 (259)
T PRK06125        227 VADLVAFLASPRSGYTSGTVVTVDGG  252 (259)
T ss_pred             HHHHHHHHcCchhccccCceEEecCC
Confidence            99999998874333 35677777665

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.44  E-value=1.1e-11  Score=118.83  Aligned_cols=208  Identities=13%  Similarity=0.080  Sum_probs=130.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||+|+||.+++++|++.|++|+++.|+...  .+.+...           ..++..+.+|++|.+++.+++
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dl~~~~~~~~~~   76 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTAL-----------GRRFLSLTADLRKIDGIPALL   76 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhc-----------CCeEEEEECCCCCHHHHHHHH
Confidence            345789999999999999999999999999988775431  1122111           124567899999998888877


Q ss_pred             c-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCC
Q 044905           80 G-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~  136 (427)
                      +       .+|++||++|.....+           .+++|+.++.++++++...    + -.++|++||...+.+.    
T Consensus        77 ~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----  152 (253)
T PRK08993         77 ERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG----  152 (253)
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC----
Confidence            5       5899999999653221           5678888988888877542    2 2578888877632211    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce-EEe---cccccCCCCCcccHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV-VVS---AEASVDANDYKVAKSQ  208 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i-~~~---~~~~~~~~~~~i~v~D  208 (427)
                       .....     |+..+ .+.+.+.+.+    ...|+++..++||.+..........- ...   ....+..  .+...+|
T Consensus       153 -~~~~~-----Y~~sK-aa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~e  223 (253)
T PRK08993        153 -IRVPS-----YTASK-SGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAG--RWGLPSD  223 (253)
T ss_pred             -CCCcc-----hHHHH-HHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCC--CCcCHHH
Confidence             11122     22222 2234444433    35689999999996654221100000 000   0001111  3678899


Q ss_pred             HHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          209 IASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      +|+.++.++.+...+ .|..+.+.++
T Consensus       224 va~~~~~l~s~~~~~~~G~~~~~dgg  249 (253)
T PRK08993        224 LMGPVVFLASSASDYINGYTIAVDGG  249 (253)
T ss_pred             HHHHHHHHhCccccCccCcEEEECCC
Confidence            999999998754333 5666665443

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.1e-11  Score=119.22  Aligned_cols=212  Identities=19%  Similarity=0.143  Sum_probs=129.2

Q ss_pred             CCCEEEEEcCCc-HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATG-QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG-~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+| .||+++++.|+++|++|+++.|+..+.+........     .....++.++.+|++|.+++.++++ 
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~~~~~~~~~~~~   90 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAA-----ELGLGRVEAVVCDVTSEAQVDALIDA   90 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-----hcCCceEEEEEccCCCHHHHHHHHHH
Confidence            457899999997 699999999999999999999987654433221110     0001245689999999988887664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|++||++|.....+           .+.+|+.+...+++++..    .+ -.+++++||.....     ...
T Consensus        91 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~-----~~~  165 (262)
T PRK07831         91 AVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR-----AQH  165 (262)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC-----CCC
Confidence                  5799999999643221           345677777777776643    33 45777776654211     111


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEEe--cccccCCCCCcccHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVVS--AEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~~--~~~~~~~~~~~i~v~DVA~  211 (427)
                      +...     |+..+ .+.+.+.+.+.    ..|+++..|+||++........ ..-...  ....+..  .+...+|||+
T Consensus       166 ~~~~-----Y~~sK-aal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~--r~~~p~~va~  237 (262)
T PRK07831        166 GQAH-----YAAAK-AGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFG--RAAEPWEVAN  237 (262)
T ss_pred             CCcc-----hHHHH-HHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCC--CCcCHHHHHH
Confidence            1112     22222 23455555443    4689999999996543211000 000000  0011111  3568899999


Q ss_pred             HHHHHhcCcccc-cCcEEEEec
Q 044905          212 LVADVFSNTAVA-ENKVVKVFT  232 (427)
Q Consensus       212 ~v~~al~~~~~~-~g~~~nI~~  232 (427)
                      +++.+++....+ .|..+.+.+
T Consensus       238 ~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        238 VIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             HHHHHcCchhcCcCCceEEeCC
Confidence            999988754333 566666654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.44  E-value=1.2e-11  Score=119.06  Aligned_cols=216  Identities=11%  Similarity=0.031  Sum_probs=126.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||+|+||.++++.|+++|+.|+++.|+.. ....+......       ...++.++.+|++|.+++.+++.
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~i~~~~~   77 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-------AGGEAIAVKGDVTVESDVVNLIQ   77 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-------cCCeEEEEEecCCCHHHHHHHHH
Confidence            34679999999999999999999999999998888653 22222211110       01244578999999998877664


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHH----HHHHHcC-CCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVI----QAAQLAG-VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll----~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                             .+|++||++|.....+           .+++|+.+...++    ..+.+.+ -.++|++||.....     ..
T Consensus        78 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----~~  152 (261)
T PRK08936         78 TAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----PW  152 (261)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----CC
Confidence                   4799999999754322           3456666655444    4445554 35888888764211     11


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCcc-c-eEEec--ccccCCCCCcccHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSY-N-VVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~-~-i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .....|.....+-.  ...+.+...+...|++++.|+||.++........ . -....  ...+..  .+.+.+|+++.+
T Consensus       153 ~~~~~Y~~sKaa~~--~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~  228 (261)
T PRK08936        153 PLFVHYAASKGGVK--LMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMG--YIGKPEEIAAVA  228 (261)
T ss_pred             CCCcccHHHHHHHH--HHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            11222222111100  0122233333456899999999966543211000 0 00000  001111  367899999999


Q ss_pred             HHHhcCcccc-cCcEEEEecC
Q 044905          214 ADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~~-~g~~~nI~~~  233 (427)
                      .+++.....+ .|..+.+.++
T Consensus       229 ~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        229 AWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             HHHcCcccCCccCcEEEECCC
Confidence            9988754333 4555666555

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.44  E-value=1.8e-12  Score=123.24  Aligned_cols=154  Identities=16%  Similarity=0.235  Sum_probs=105.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      ||+|+||||||+||+++++.|+++|++|++++|+....  +..          ....++.++.+|+.|.+++.+++.   
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~----------~~~~~~~~~~~D~~~~~~~~~~~~~~~   68 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAA----------AAGERLAEVELDLSDAAAAAAWLAGDL   68 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhh----------ccCCeEEEEEeccCCHHHHHHHHHHHH
Confidence            56999999999999999999999999999999986531  110          001355689999999998887442   


Q ss_pred             --------CcCEEEEccCCCCC-C-----------CCccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           81 --------NAGKVVVTIGPTED-G-----------PTSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 --------g~d~Vi~~ag~~~~-~-----------~~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                              ..|++||++|.... .           ..+++|+.+...+++.+    ...+.++||++||.+.+..     
T Consensus        69 ~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----  143 (243)
T PRK07023         69 LAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNA-----  143 (243)
T ss_pred             HHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCC-----
Confidence                    36899999986432 1           14567777766555544    4445679999998763211     


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCC
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTED  180 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~  180 (427)
                         .+.+  ..|...+ ...+.+.+.+.   ..++++..++||+++.
T Consensus       144 ---~~~~--~~Y~~sK-~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t  184 (243)
T PRK07023        144 ---YAGW--SVYCATK-AALDHHARAVALDANRALRIVSLAPGVVDT  184 (243)
T ss_pred             ---CCCc--hHHHHHH-HHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence               1111  1233222 33566666554   3589999999997654

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.43  E-value=1.1e-11  Score=119.35  Aligned_cols=215  Identities=11%  Similarity=0.048  Sum_probs=124.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|+++.|+. +....+.....      .....++.++.+|++|++++.+++.
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~   79 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE------QKYGIKAKAYPLNILEPETYKELFK   79 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH------HhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4557999999999999999999999999998886643 33333221110      0001245689999999988877664


Q ss_pred             -------CcCEEEEccCCCCC------CC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccc
Q 044905           81 -------NAGKVVVTIGPTED------GP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~------~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~  132 (427)
                             .+|++||++|....      .+           .+++|+.+...+.+    .+++.+..+||++||.+...  
T Consensus        80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--  157 (260)
T PRK08416         80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLV--  157 (260)
T ss_pred             HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccccc--
Confidence                   47999999975321      11           22334444333333    34444556899998865210  


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE-EecccccCCCC-CcccH
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV-VSAEASVDAND-YKVAK  206 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~-~~~~~~~~~~~-~~i~v  206 (427)
                         .......     |+.++ .+.+.+.+.+.    ..|+++..|.||+++........... .........+. .+.+.
T Consensus       158 ---~~~~~~~-----Y~asK-~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p  228 (260)
T PRK08416        158 ---YIENYAG-----HGTSK-AAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQP  228 (260)
T ss_pred             ---CCCCccc-----chhhH-HHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCH
Confidence               1111122     22222 23444444443    46899999999976543210000000 00000000111 26789


Q ss_pred             HHHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      +|+|.+++.++.....+ .|..+.+.++
T Consensus       229 ~~va~~~~~l~~~~~~~~~G~~i~vdgg  256 (260)
T PRK08416        229 EDLAGACLFLCSEKASWLTGQTIVVDGG  256 (260)
T ss_pred             HHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence            99999999988753333 5677766554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.43  E-value=1.3e-11  Score=122.21  Aligned_cols=211  Identities=15%  Similarity=0.107  Sum_probs=130.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++.++++||||+|+||+++++.|+++|++|++.+|+.. ..+.+......       ...++.++.+|++|.+++.++++
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-------~g~~~~~~~~Dv~d~~~~~~~~~   82 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-------AGAKAVAVAGDISQRATADELVA   82 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-------cCCeEEEEeCCCCCHHHHHHHHH
Confidence            45679999999999999999999999999999887543 33332221100       01345689999999988877664


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc-----------CCCeEEEEecccccccc
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA-----------GVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~-----------gVk~~V~vSSs~v~~~~  132 (427)
                            .+|+|||++|......           .+++|+.++.++++++...           ...++|++||.+...+.
T Consensus        83 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         83 TAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence                  5899999999754321           4567888888888876421           12588988876522111


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHH
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~D  208 (427)
                           .....     |+..+ .+.+.+.+.+.    ..|+++..|.||.......    .+..............++.+|
T Consensus       163 -----~~~~~-----Y~asK-aal~~l~~~la~e~~~~gI~vn~i~Pg~~t~~~~----~~~~~~~~~~~~~~~~~~pe~  227 (306)
T PRK07792        163 -----VGQAN-----YGAAK-AGITALTLSAARALGRYGVRANAICPRARTAMTA----DVFGDAPDVEAGGIDPLSPEH  227 (306)
T ss_pred             -----CCCch-----HHHHH-HHHHHHHHHHHHHhhhcCeEEEEECCCCCCchhh----hhccccchhhhhccCCCCHHH
Confidence                 11122     22222 23444444433    4689999999984222111    110000000011123568999


Q ss_pred             HHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          209 IASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      +|.+++.++.... ...|.+|.+.++.
T Consensus       228 va~~v~~L~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        228 VVPLVQFLASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             HHHHHHHHcCccccCCCCCEEEEcCCe
Confidence            9999998886432 2467788776653

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.43  E-value=8.7e-12  Score=115.11  Aligned_cols=179  Identities=15%  Similarity=0.162  Sum_probs=119.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---C
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---N   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---g   81 (427)
                      |+++||||+|+||.++++.|+++ ++|++++|+..                        .+.+|++|.+++.++++   +
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------~~~~D~~~~~~~~~~~~~~~~   55 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------DVQVDITDPASIRALFEKVGK   55 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------ceEecCCChHHHHHHHHhcCC
Confidence            48999999999999999999999 99999999752                        36789999998888776   6


Q ss_pred             cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCccchhhh
Q 044905           82 AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLF  148 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~  148 (427)
                      +|++||++|.....+           .+++|+.+..++++++...  ...+|+++||....     ........|..   
T Consensus        56 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~-----~~~~~~~~Y~~---  127 (199)
T PRK07578         56 VDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSD-----EPIPGGASAAT---  127 (199)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccC-----CCCCCchHHHH---
Confidence            899999998643322           3456777888888877542  23568888765411     11111122221   


Q ss_pred             hccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          149 SRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                        ++ .+.+.+.+.+.   ..|+++..|.||++......  ..       .......+++.+|+|+.+..+++..  ..|
T Consensus       128 --sK-~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~--~~-------~~~~~~~~~~~~~~a~~~~~~~~~~--~~g  193 (199)
T PRK07578        128 --VN-GALEGFVKAAALELPRGIRINVVSPTVLTESLEK--YG-------PFFPGFEPVPAARVALAYVRSVEGA--QTG  193 (199)
T ss_pred             --HH-HHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh--hh-------hcCCCCCCCCHHHHHHHHHHHhccc--eee
Confidence              11 12333333332   46899999999976543210  00       0011124789999999999888743  466


Q ss_pred             cEEEE
Q 044905          226 KVVKV  230 (427)
Q Consensus       226 ~~~nI  230 (427)
                      ++|++
T Consensus       194 ~~~~~  198 (199)
T PRK07578        194 EVYKV  198 (199)
T ss_pred             EEecc
Confidence            77664

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.43  E-value=5e-12  Score=121.85  Aligned_cols=203  Identities=15%  Similarity=0.183  Sum_probs=128.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|+++.|+......                .++.++.+|++|.+++..+++ 
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----------------ENYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----------------CceEEEEccCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999988754211                133578999999998887664 


Q ss_pred             ------CcCEEEEccCCCCCC--------------------CCccccHHHHHHHHHHHHH----cCCCeEEEEecccccc
Q 044905           81 ------NAGKVVVTIGPTEDG--------------------PTSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTA  130 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~--------------------~~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~  130 (427)
                            .+|++||++|.....                    ..+++|+.++..+++++..    .+..+||++||.....
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence                  579999999864211                    0345777788888877764    3456899998776322


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC--CCCCCCc-cceEEe-c---------
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE--DFSPESS-YNVVVS-A---------  193 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~--~~~~~~~-~~i~~~-~---------  193 (427)
                      +.     .....     |+..+ .+.+.+.+.+    ...|+++..|+||++.  .+..... ...... +         
T Consensus       151 ~~-----~~~~~-----Y~~sK-~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  219 (266)
T PRK06171        151 GS-----EGQSC-----YAATK-AALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAG  219 (266)
T ss_pred             CC-----CCCch-----hHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhh
Confidence            11     11122     22221 1234444433    3568999999999653  1111000 000000 0         


Q ss_pred             -c---cccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          194 -E---ASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       194 -~---~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                       .   ..+..  .+...+|||.++..+++.... ..|.++.+.++
T Consensus       220 ~~~~~~~p~~--r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        220 YTKTSTIPLG--RSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             hcccccccCC--CCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence             0   01111  256789999999998875333 35677777665

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.43  E-value=2e-11  Score=115.76  Aligned_cols=202  Identities=10%  Similarity=0.078  Sum_probs=123.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~al   79 (427)
                      |+.++|+||||+|++|++|++.|+++|++|++++|+......+......      .....+.++.+|+.|  .+++.+++
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE------AGHPEPFAIRFDLMSAEEKEFEQFA   77 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHH------cCCCCcceEEeeecccchHHHHHHH
Confidence            3457899999999999999999999999999999998765444322110      001233478889875  33444332


Q ss_pred             --------cCcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCC
Q 044905           80 --------GNAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 --------~g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~  135 (427)
                              ..+|+|||++|.... .+           .+++|+.+..++++++..    .+..+++++||....  .   
T Consensus        78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~--~---  152 (239)
T PRK08703         78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE--T---  152 (239)
T ss_pred             HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc--c---
Confidence                    467999999996421 11           357788888888777643    456789988875421  0   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh----cC-CCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI----ET-DVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~-gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                         +.+.+  ..|+.++ .+.+.+.+.+.    .. ++++..|+||++......   .. ..+.  ...  .+...+|++
T Consensus       153 ---~~~~~--~~Y~~sK-aa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~---~~-~~~~--~~~--~~~~~~~~~  218 (239)
T PRK08703        153 ---PKAYW--GGFGASK-AALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI---KS-HPGE--AKS--ERKSYGDVL  218 (239)
T ss_pred             ---CCCCc--cchHHhH-HHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc---cc-CCCC--Ccc--ccCCHHHHH
Confidence               11111  1222222 23455554443    22 599999999976543211   10 1111  111  357999999


Q ss_pred             HHHHHHhcCccc-ccCcEE
Q 044905          211 SLVADVFSNTAV-AENKVV  228 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~  228 (427)
                      ..+..++..... ..|.++
T Consensus       219 ~~~~~~~~~~~~~~~g~~~  237 (239)
T PRK08703        219 PAFVWWASAESKGRSGEIV  237 (239)
T ss_pred             HHHHHHhCccccCcCCeEe
Confidence            999998874222 344443

>PRK06484 short chain dehydrogenase; Validated

Probab=99.43  E-value=6.1e-12  Score=133.11  Aligned_cols=207  Identities=14%  Similarity=0.099  Sum_probs=134.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||+|+||.++++.|+++|++|+++.|+...++.+....          ..++..+.+|++|.+++.++++   
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~~  338 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----------GDEHLSVQADITDEAAVESAFAQIQ  338 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceeEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999977665553321          1123468999999998887764   


Q ss_pred             ----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 ----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                          .+|++|||+|.... .+           .+++|+.++.++++++...  +-.+||++||.+...+     ..+...
T Consensus       339 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~  413 (520)
T PRK06484        339 ARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA-----LPPRNA  413 (520)
T ss_pred             HHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC-----CCCCch
Confidence                47999999996521 11           4678888999998887653  3468999988763211     111222


Q ss_pred             cchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc---eEEec--ccccCCCCCcccHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN---VVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~---i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      |.     ..+ ...+.+.+.+    ...|+++..|.||++..........   .....  ...+..  .+.+.+|||+++
T Consensus       414 Y~-----asK-aal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dia~~~  485 (520)
T PRK06484        414 YC-----ASK-AAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLG--RLGDPEEVAEAI  485 (520)
T ss_pred             hH-----HHH-HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            22     221 2234444433    3568999999999765421110000   00000  001111  256899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+++.... ..|..+.+.++
T Consensus       486 ~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        486 AFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             HHHhCccccCccCcEEEECCC
Confidence            998874322 35777777666

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.42  E-value=6.1e-12  Score=119.08  Aligned_cols=207  Identities=14%  Similarity=0.134  Sum_probs=125.4

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-----
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-----   80 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-----   80 (427)
                      |+||||||+||.++++.|+++|++|+++.|+.. ....+......       ...++.++.+|++|.+++..++.     
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   73 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-------QGGNARLLQFDVADRVACRTLLEADIAE   73 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-------cCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999887643 33332221110       12356789999999998877664     


Q ss_pred             --CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH-----HcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ-----LAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~-----~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        ..|.+||++|.....+           .+++|+.++.++++++.     ..+..+||++||.+...+..     ....
T Consensus        74 ~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----~~~~  148 (239)
T TIGR01831        74 HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR-----GQVN  148 (239)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC-----CCcc
Confidence              4699999998653321           45677888888888752     24556899998865221111     1122


Q ss_pred             cchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEE-ecccccCCCCCcccHHHHHHHHHHHh
Q 044905          143 FFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVV-SAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      |.     ..+ .+.+.+.+    .+...|++++.++||++............. .....+..  .+...+|+|+++..++
T Consensus       149 Y~-----~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~~~~~l~  220 (239)
T TIGR01831       149 YS-----AAK-AGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMN--RMGQPAEVASLAGFLM  220 (239)
T ss_pred             hH-----HHH-HHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCC--CCCCHHHHHHHHHHHc
Confidence            22     111 11222333    233568999999999665322111111000 00001111  2568899999999998


Q ss_pred             cCcccc-cCcEEEEecC
Q 044905          218 SNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       218 ~~~~~~-~g~~~nI~~~  233 (427)
                      .....+ .|..+.+.++
T Consensus       221 ~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       221 SDGASYVTRQVISVNGG  237 (239)
T ss_pred             CchhcCccCCEEEecCC
Confidence            754333 4555555443

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.42  E-value=1.6e-11  Score=119.10  Aligned_cols=164  Identities=15%  Similarity=0.162  Sum_probs=111.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..+.|+|||||+.||.+++.+|.++|..++.+.|....++.+....-..   .+  ..++.++++|++|.+++.+++  
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~---~~--~~~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKL---GS--LEKVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHh---CC--cCccEEEeCccCCHHHHHHHHHH
Confidence            45678999999999999999999999998888887776554442211110   00  115779999999999988664  


Q ss_pred             -----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           80 -----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        80 -----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .++|++|||||....+.           .+++|+.|+..+.+++.    +.+-.|||.+||..-.  ...   +.
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~--~~~---P~  159 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK--MPL---PF  159 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc--cCC---Cc
Confidence                 57999999999766422           67888888888877764    4455799999988721  111   11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh-c---CCCeEE-EEeCCCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI-E---TDVSYT-FIKTSLTEDF  181 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~-~---~gl~~t-ilRPG~~~~~  181 (427)
                      .+.|..+.      .+.+.+.+.++ +   .+..+. ++-||+++..
T Consensus       160 ~~~Y~ASK------~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te  200 (282)
T KOG1205|consen  160 RSIYSASK------HALEGFFETLRQELIPLGTIIIILVSPGPIETE  200 (282)
T ss_pred             ccccchHH------HHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence            11233333      23666666666 2   232222 5889977653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.42  E-value=1.3e-11  Score=121.05  Aligned_cols=212  Identities=17%  Similarity=0.124  Sum_probs=128.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc---------chHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL---------GAAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~---------~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      ++.++++||||++.||+++++.|+++|++|+++.|+.         .....+......       ...++.++.+|++|.
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~~~   76 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-------AGGEAVANGDDIADW   76 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh-------cCCceEEEeCCCCCH
Confidence            4567899999999999999999999999999988765         333222221110       012445789999998


Q ss_pred             HHHHHHh-------cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC------CCeEEEEe
Q 044905           73 ESIAKAI-------GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG------VGHVAIIY  124 (427)
Q Consensus        73 ~sl~~al-------~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g------Vk~~V~vS  124 (427)
                      +++.+++       ..+|++||++|.....+           .+++|+.++..+++++..    .+      -.+||++|
T Consensus        77 ~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~is  156 (286)
T PRK07791         77 DGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTS  156 (286)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeC
Confidence            8887765       35799999999754321           456788888777776642    11      24799888


Q ss_pred             cccccccccCCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCC
Q 044905          125 DGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDAN  200 (427)
Q Consensus       125 Ss~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~  200 (427)
                      |.+...+.     .....|.     .++ .+.+.+.+.    +...|+++..|.||...............   ......
T Consensus       157 S~~~~~~~-----~~~~~Y~-----asK-aal~~l~~~la~el~~~gIrVn~v~Pg~~T~~~~~~~~~~~~---~~~~~~  222 (286)
T PRK07791        157 SGAGLQGS-----VGQGNYS-----AAK-AGIAALTLVAAAELGRYGVTVNAIAPAARTRMTETVFAEMMA---KPEEGE  222 (286)
T ss_pred             chhhCcCC-----CCchhhH-----HHH-HHHHHHHHHHHHHHHHhCeEEEEECCCCCCCcchhhHHHHHh---cCcccc
Confidence            76521111     1112222     111 123333333    33578999999998322211100000000   001111


Q ss_pred             CCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          201 DYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ......+|||++++.++..... ..|..+.+.++.
T Consensus       223 ~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        223 FDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             cCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence            1256899999999998874322 467778777764

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.41  E-value=9.3e-12  Score=119.51  Aligned_cols=183  Identities=11%  Similarity=0.031  Sum_probs=115.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..++++||||||+||+++++.|+++|++|+++.|+.........   .         .....+.+|++|.+++.+.+.+
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~---~---------~~~~~~~~D~~~~~~~~~~~~~   79 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND---E---------SPNEWIKWECGKEESLDKQLAS   79 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc---c---------CCCeEEEeeCCCHHHHHHhcCC
Confidence            456799999999999999999999999999999998632111100   0         0113688999999999999999


Q ss_pred             cCEEEEccCCCCCCC--------CccccHHHHHHHHHHHHHc-------CCCeEEEEecccccccccCCCCCCCCccchh
Q 044905           82 AGKVVVTIGPTEDGP--------TSEVSTSDAFQVIQAAQLA-------GVGHVAIIYDGNTTAASTYNVLDGISSFFNN  146 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~--------~~~vn~~~~~~ll~Aa~~~-------gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~  146 (427)
                      +|++|||+|......        .+++|+.++.++++++...       +-..+++.||++   +. .+  ...+.|...
T Consensus        80 iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a---~~-~~--~~~~~Y~aS  153 (245)
T PRK12367         80 LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEA---EI-QP--ALSPSYEIS  153 (245)
T ss_pred             CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEeccc---cc-CC--CCCchhHHH
Confidence            999999998643211        5678999999999877542       112233333332   11 11  111222222


Q ss_pred             hhhccc--cccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          147 LFSRNQ--PLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       147 ~~~k~~--~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      ..+-..  .+ ..++.......++.++.+.||.+.....          +      ...++.+|+|+.++.++.+
T Consensus       154 Kaal~~~~~l-~~~l~~e~~~~~i~v~~~~pg~~~t~~~----------~------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        154 KRLIGQLVSL-KKNLLDKNERKKLIIRKLILGPFRSELN----------P------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHHHH-HHHHHHhhcccccEEEEecCCCcccccC----------c------cCCCCHHHHHHHHHHHHhc
Confidence            211000  00 0112222235688899999986543211          0      1256889999999988864

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.41  E-value=2.1e-11  Score=115.03  Aligned_cols=191  Identities=14%  Similarity=0.108  Sum_probs=125.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+++||||+|+||+++++.|+++|++|+++.|+.+++..+....            ++.++.+|++|.+++.++++    
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~v~~~~~~~~~   68 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------------DVDAIVCDNTDPASLEEARGLFPH   68 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------------cCcEEecCCCCHHHHHHHHHHHhh
Confidence            47999999999999999999999999999999876654442211            12478999999999888775    


Q ss_pred             CcCEEEEccCCCCC----------C------CCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 NAGKVVVTIGPTED----------G------PTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 g~d~Vi~~ag~~~~----------~------~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                      .+|++||++|+...          +      ..+++|+.+..++++++...  .-.++|++||...      .   ....
T Consensus        69 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~------~---~~~~  139 (223)
T PRK05884         69 HLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP------P---AGSA  139 (223)
T ss_pred             cCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC------C---Cccc
Confidence            58999999874210          0      04567888888888877542  2258998887541      0   1112


Q ss_pred             cchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          143 FFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                      |..     +| .+...+.+.    +...|+++..|.||++.....   ...    .   ..  +.-..+|+++++..+++
T Consensus       140 Y~a-----sK-aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~---~~~----~---~~--p~~~~~~ia~~~~~l~s  201 (223)
T PRK05884        140 EAA-----IK-AALSNWTAGQAAVFGTRGITINAVACGRSVQPGY---DGL----S---RT--PPPVAAEIARLALFLTT  201 (223)
T ss_pred             cHH-----HH-HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh---hhc----c---CC--CCCCHHHHHHHHHHHcC
Confidence            221     11 123333333    335689999999997653211   000    0   01  12278999999999887


Q ss_pred             Cccc-ccCcEEEEecCC
Q 044905          219 NTAV-AENKVVKVFTDP  234 (427)
Q Consensus       219 ~~~~-~~g~~~nI~~~~  234 (427)
                      .... ..|.++.+.++.
T Consensus       202 ~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        202 PAARHITGQTLHVSHGA  218 (223)
T ss_pred             chhhccCCcEEEeCCCe
Confidence            5333 356777776653

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.41  E-value=1.6e-11  Score=133.95  Aligned_cols=213  Identities=17%  Similarity=0.184  Sum_probs=130.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||+|+||+++++.|+++|++|++++|+......+......     .....++..+.+|++|.+++.++++   
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~-----~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEING-----QFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-----hcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999997665443221110     0001234578999999999888775   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHH----HHHHHcC-CCeEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVI----QAAQLAG-VGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll----~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          ++|+|||++|.....+           .+++|+.+...++    ..++..+ -.+||++||.....+..     . 
T Consensus       489 ~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~-----~-  562 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK-----N-  562 (676)
T ss_pred             HhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC-----C-
Confidence                6899999999754322           2345555555444    3344444 35799998865321110     1 


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCC--CC--CCCc------cceEEe--c----ccccCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTED--FS--PESS------YNVVVS--A----EASVDAN  200 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~--~~--~~~~------~~i~~~--~----~~~~~~~  200 (427)
                          ...|+.++ .+.+.+.+.+.    ..|+++..|+||.+..  ..  ..+.      +++...  .    ...... 
T Consensus       563 ----~~aY~aSK-aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~-  636 (676)
T TIGR02632       563 ----ASAYSAAK-AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLK-  636 (676)
T ss_pred             ----CHHHHHHH-HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcC-
Confidence                12333332 23444544433    4589999999984421  11  0000      000000  0    001111 


Q ss_pred             CCcccHHHHHHHHHHHhcCc-ccccCcEEEEecCC
Q 044905          201 DYKVAKSQIASLVADVFSNT-AVAENKVVKVFTDP  234 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~-~~~~g~~~nI~~~~  234 (427)
                       .+++.+|||+++..++... ....|.++++.++.
T Consensus       637 -r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       637 -RHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             -CCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence             3588999999999887643 23458888887774

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.41  E-value=2.4e-11  Score=116.76  Aligned_cols=213  Identities=10%  Similarity=0.051  Sum_probs=124.4

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcc--------hHHHHHHHHhhhhhhhhhhhccceEEEecCCC
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELG--------AAQELARLAASYKILSKEELKRLNAVESNFDS   71 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~--------~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D   71 (427)
                      .+.++|+||||||  .||.+++++|+++|++|++..|+..        ....+.....+   +. ....++.++.+|++|
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~g~~~~~~~~D~~~   79 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE---LL-KNGVKVSSMELDLTQ   79 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHH---HH-hcCCeEEEEEcCCCC
Confidence            3567999999995  8999999999999999988754310        01111110000   00 001345688999999


Q ss_pred             HHHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEeccccc
Q 044905           72 AESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTT  129 (427)
Q Consensus        72 ~~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~  129 (427)
                      .+++.+++.       ..|++||++|.....+           .+++|+.+...+..+    +.+.+-.+||++||....
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~  159 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQ  159 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccC
Confidence            998887764       3799999998654322           355677777766543    344445689999877521


Q ss_pred             ccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCC-CCCccceEEecccccCCCCCcc
Q 044905          130 AASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFS-PESSYNVVVSAEASVDANDYKV  204 (427)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~-~~~~~~i~~~~~~~~~~~~~~i  204 (427)
                           ....+...|.     ..+ .+.+.+.+.+    ...|++++.++||+++... ....... . ....+..  ...
T Consensus       160 -----~~~~~~~~Y~-----~sK-~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~-~-~~~~~~~--~~~  224 (256)
T PRK12859        160 -----GPMVGELAYA-----ATK-GAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQG-L-LPMFPFG--RIG  224 (256)
T ss_pred             -----CCCCCchHHH-----HHH-HHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHHH-H-HhcCCCC--CCc
Confidence                 1111112222     211 1234443333    3568999999999765421 1100000 0 0011111  245


Q ss_pred             cHHHHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          205 AKSQIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      ..+|+|+++..++.....+ .|..+.+-++
T Consensus       225 ~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        225 EPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            7899999999888654333 5666665544

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.40  E-value=1.3e-11  Score=119.20  Aligned_cols=211  Identities=16%  Similarity=0.142  Sum_probs=123.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH----HH-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA----KA-   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~----~a-   78 (427)
                      ++++||||+|+||++|++.|+++|++|+++.|+ .+.+..+......      ....++.++.+|++|.+++.    +. 
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~Dv~d~~~~~~~~~~~~   75 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA------RRPNSAVTCQADLSNSATLFSRCEAII   75 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHh------ccCCceEEEEccCCCchhhHHHHHHHH
Confidence            589999999999999999999999999998765 3344333221100      00123447899999987543    22 


Q ss_pred             ------hcCcCEEEEccCCCCCCC----------------------CccccHHHHHHHHHHHHHcC----------CCeE
Q 044905           79 ------IGNAGKVVVTIGPTEDGP----------------------TSEVSTSDAFQVIQAAQLAG----------VGHV  120 (427)
Q Consensus        79 ------l~g~d~Vi~~ag~~~~~~----------------------~~~vn~~~~~~ll~Aa~~~g----------Vk~~  120 (427)
                            +.++|+|||++|.....+                      .+++|+.+...+++++....          ...+
T Consensus        76 ~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  155 (267)
T TIGR02685        76 DACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSI  155 (267)
T ss_pred             HHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEE
Confidence                  246899999999643211                      14677777888887664321          2356


Q ss_pred             EEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEe-ccc
Q 044905          121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVS-AEA  195 (427)
Q Consensus       121 V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~-~~~  195 (427)
                      ++++|...  .   ....+...     |+.+| .+.+.+.+.+.    ..|++++.|+||++..... ........ ...
T Consensus       156 v~~~s~~~--~---~~~~~~~~-----Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~-~~~~~~~~~~~~  223 (267)
T TIGR02685       156 VNLCDAMT--D---QPLLGFTM-----YTMAK-HALEGLTRSAALELAPLQIRVNGVAPGLSLLPDA-MPFEVQEDYRRK  223 (267)
T ss_pred             EEehhhhc--c---CCCcccch-----hHHHH-HHHHHHHHHHHHHHhhhCeEEEEEecCCccCccc-cchhHHHHHHHh
Confidence            66665431  1   11111222     22222 23455555443    4689999999996532111 00000000 000


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          196 SVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       196 ~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .... ......+|++++++.++.+... ..|..+.+.++.
T Consensus       224 ~~~~-~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       224 VPLG-QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             CCCC-cCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence            1111 1256899999999998875433 367777776653

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.40  E-value=1.6e-11  Score=127.75  Aligned_cols=209  Identities=18%  Similarity=0.176  Sum_probs=129.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||+|+||..+++.|+++|++|+++.|+... +.+......         -+..++.+|++|.+++..+++  
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~---------~~~~~~~~Dv~~~~~~~~~~~~~  278 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANR---------VGGTALALDITAPDAPARIAEHL  278 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------cCCeEEEEeCCCHHHHHHHHHHH
Confidence            35789999999999999999999999999999885432 122111111         012378899999988877664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCC----CeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGV----GHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gV----k~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|......           .+.+|+.++.++++++.....    .+||++||.+...+..     ..
T Consensus       279 ~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----~~  353 (450)
T PRK08261        279 AERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----GQ  353 (450)
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----CC
Confidence                 5899999999754321           456888899999999876433    6899998765322211     11


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCC-CCcccHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDAN-DYKVAKSQIASLVAD  215 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~-~~~i~v~DVA~~v~~  215 (427)
                      ..|.     ..+ ...+.+.+    .+...|+.+..+.||+++....... ............. ......+|||+++++
T Consensus       354 ~~Y~-----asK-aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~l~~~~~p~dva~~~~~  426 (450)
T PRK08261        354 TNYA-----ASK-AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI-PFATREAGRRMNSLQQGGLPVDVAETIAW  426 (450)
T ss_pred             hHHH-----HHH-HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc-chhHHHHHhhcCCcCCCCCHHHHHHHHHH
Confidence            2222     111 11222333    3335789999999997654221100 0000000000000 123467899999998


Q ss_pred             HhcCccc-ccCcEEEEecC
Q 044905          216 VFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~  233 (427)
                      +++.... ..|.++.+.+.
T Consensus       427 l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        427 LASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             HhChhhcCCCCCEEEECCC
Confidence            8864322 35778877665

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.39  E-value=2.9e-11  Score=116.13  Aligned_cols=209  Identities=13%  Similarity=0.147  Sum_probs=127.7

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||+  +.||..++++|+++|++|++..|+......+....          ..++.++.+|++|++++.+++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~~~~   74 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLV----------DEEDLLVECDVASDESIERAF   74 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhc----------cCceeEEeCCCCCHHHHHHHH
Confidence            556789999999  79999999999999999999998732112111110          123457899999998887765


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                      +       .+|++||++|....    ++           .+++|+.+...+++++...  .-.++|++||.+...  .  
T Consensus        75 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~--~--  150 (252)
T PRK06079         75 ATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSER--A--  150 (252)
T ss_pred             HHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccc--c--
Confidence            3       48999999986431    11           4567777777777776543  125788888765210  0  


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc--eEEec--ccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN--VVVSA--EASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~--i~~~~--~~~~~~~~~~i~v~  207 (427)
                       .....     .|+-+| .+.+.+.+.+.    ..|+++..|.||++..........  -....  ...+..  .+...+
T Consensus       151 -~~~~~-----~Y~asK-aal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~pe  221 (252)
T PRK06079        151 -IPNYN-----VMGIAK-AALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDG--VGVTIE  221 (252)
T ss_pred             -CCcch-----hhHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCccc--CCCCHH
Confidence             01111     122221 22344444333    568999999999765421110000  00000  001111  267889


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |||+++..+++.... ..|.++.+.++
T Consensus       222 dva~~~~~l~s~~~~~itG~~i~vdgg  248 (252)
T PRK06079        222 EVGNTAAFLLSDLSTGVTGDIIYVDKG  248 (252)
T ss_pred             HHHHHHHHHhCcccccccccEEEeCCc
Confidence            999999999875333 35677666554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.39  E-value=9e-12  Score=118.68  Aligned_cols=228  Identities=11%  Similarity=0.087  Sum_probs=140.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--H--HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--Q--ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~--~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +++.||||-||+-|+.|++.||+.||+|+++.|+.+..  .  .|...+.       .+..+|.++.||++|..+|.+++
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~-------~~~~~l~l~~gDLtD~~~l~r~l   74 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPH-------LNDPRLHLHYGDLTDSSNLLRIL   74 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccc-------cCCceeEEEeccccchHHHHHHH
Confidence            56789999999999999999999999999999986521  2  1211111       12346889999999999999999


Q ss_pred             cC--cCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCC--CeEEEEecccccccccCCCC-CCCCccchhh
Q 044905           80 GN--AGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGV--GHVAIIYDGNTTAASTYNVL-DGISSFFNNL  147 (427)
Q Consensus        80 ~g--~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gV--k~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~  147 (427)
                      +.  .|-|+|+++.+..     .|  ..+++..|+++|++|.+..|-  -+|...|||-.|+.....+. +..|.++.+.
T Consensus        75 ~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSP  154 (345)
T COG1089          75 EEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSP  154 (345)
T ss_pred             HhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCH
Confidence            85  5889998875432     23  567888899999999999874  35666777777665433222 3333333344


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCCCCCCCCCCCcc-------------ceEEe-----cccccCCCCCcccHHH
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTSLTEDFSPESSY-------------NVVVS-----AEASVDANDYKVAKSQ  208 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG~~~~~~~~~~~-------------~i~~~-----~~~~~~~~~~~i~v~D  208 (427)
                      |+-.+ +-+-.+...++ ..|+-.+.   |..-|..++..+             .+..+     ..++....-+|=|..|
T Consensus       155 YAvAK-lYa~W~tvNYResYgl~Acn---GILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~D  230 (345)
T COG1089         155 YAVAK-LYAYWITVNYRESYGLFACN---GILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKD  230 (345)
T ss_pred             HHHHH-HHHHheeeehHhhcCceeec---ceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHH
Confidence            44222 11111111222 23543222   211111111000             00000     0122222336889999


Q ss_pred             HHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHH
Q 044905          209 IASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELF  245 (427)
Q Consensus       209 VA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell  245 (427)
                      ..+++..+|+..   ....|.|+++...+.+++.++.
T Consensus       231 YVe~mwlmLQq~---~PddyViATg~t~sVrefv~~A  264 (345)
T COG1089         231 YVEAMWLMLQQE---EPDDYVIATGETHSVREFVELA  264 (345)
T ss_pred             HHHHHHHHHccC---CCCceEEecCceeeHHHHHHHH
Confidence            999999999854   3788999999944444444443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.39  E-value=7.7e-11  Score=114.64  Aligned_cols=212  Identities=12%  Similarity=0.099  Sum_probs=126.9

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |+.++++||||++  .||+.+++.|+++|++|++..|+....+.+......        ......+.+|++|.+++.+++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--------~g~~~~~~~Dv~d~~~v~~~~   76 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAES--------LGSDFVLPCDVEDIASVDAVF   76 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHh--------cCCceEEeCCCCCHHHHHHHH
Confidence            4457899999996  999999999999999999998875322222221111        011136889999998887765


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                      +       .+|++|||+|....    ++           .+++|+.++.++++++...  .-.++|++||.+...  .  
T Consensus        77 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~--~--  152 (271)
T PRK06505         77 EALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTR--V--  152 (271)
T ss_pred             HHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccc--c--
Confidence            3       58999999996531    11           4567777777777766432  125788888765211  0  


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccc---eE-EecccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYN---VV-VSAEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~---i~-~~~~~~~~~~~~~i~v~  207 (427)
                       ......     |.-+| .+...+.+.    +...|+++..|.||++..........   .. ......+..  .+...+
T Consensus       153 -~~~~~~-----Y~asK-aAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~pe  223 (271)
T PRK06505        153 -MPNYNV-----MGVAK-AALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLR--RTVTID  223 (271)
T ss_pred             -CCccch-----hhhhH-HHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCcc--ccCCHH
Confidence             011112     22221 123333333    33578999999999665421110000   00 000001111  256889


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.+++.... ..|..+.+.++.
T Consensus       224 eva~~~~fL~s~~~~~itG~~i~vdgG~  251 (271)
T PRK06505        224 EVGGSALYLLSDLSSGVTGEIHFVDSGY  251 (271)
T ss_pred             HHHHHHHHHhCccccccCceEEeecCCc
Confidence            999999999875333 356777776663

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.4e-11  Score=122.34  Aligned_cols=173  Identities=13%  Similarity=0.102  Sum_probs=109.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||.++++.|+++|++|++++|+.++..........     .....++.++.+|+.|.+++.++++ 
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~-----~~~~~~v~~~~~Dl~d~~sv~~~~~~   86 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT-----AVPDAKLSLRALDLSSLASVAALGEQ   86 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----hCCCCceEEEEecCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998765443221110     0001246689999999998887764 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccc-cCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAAS-TYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~-~~~~~~~~  140 (427)
                            .+|++||++|......          .+.+|+.+...+++.+..   .+..++|++||.+...+. ........
T Consensus        87 ~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~  166 (313)
T PRK05854         87 LRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE  166 (313)
T ss_pred             HHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc
Confidence                  4899999999653210          456787787766665542   234589999887632221 11100000


Q ss_pred             Ccc-chhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCC
Q 044905          141 SSF-FNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTED  180 (427)
Q Consensus       141 ~~~-~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~  180 (427)
                      ..+ ....|+.+| ++...+...+.      ..|+.+..+.||++..
T Consensus       167 ~~~~~~~~Y~~SK-~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T  212 (313)
T PRK05854        167 RSYAGMRAYSQSK-IAVGLFALELDRRSRAAGWGITSNLAHPGVAPT  212 (313)
T ss_pred             ccCcchhhhHHHH-HHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence            111 112344443 33333333332      3579999999996643

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.37  E-value=5.8e-11  Score=115.64  Aligned_cols=218  Identities=14%  Similarity=0.034  Sum_probs=128.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++|||| |+||+++++.|. +|++|++++|+..+++.+......       ...++.++.+|++|.+++.++++   
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~i~~~~~~~~   72 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE-------AGFDVSTQEVDVSSRESVKALAATAQ   72 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEEeecCCHHHHHHHHHHHH
Confidence            457899998 789999999996 899999999987655443321111       01245678999999998887764   


Q ss_pred             ---CcCEEEEccCCCCCC----CCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC--------C--CCC--
Q 044905           81 ---NAGKVVVTIGPTEDG----PTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN--------V--LDG--  139 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~----~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~--------~--~~~--  139 (427)
                         ++|++||++|.....    ..+++|+.++.++++++...  .-.++|++||++........        .  ...  
T Consensus        73 ~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (275)
T PRK06940         73 TLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELL  152 (275)
T ss_pred             hcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccc
Confidence               589999999975321    16688999999998887653  11356777766532111000        0  000  


Q ss_pred             -CC---c----cchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEE----ec--ccccCCCC
Q 044905          140 -IS---S----FFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVV----SA--EASVDAND  201 (427)
Q Consensus       140 -~~---~----~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~----~~--~~~~~~~~  201 (427)
                       .+   .    .....|+.+| .+.+.+.+.    +...|+++..|.||++..........-..    ..  ...+..  
T Consensus       153 ~~~~~~~~~~~~~~~~Y~asK-aa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~--  229 (275)
T PRK06940        153 SLPFLQPDAIEDSLHAYQIAK-RANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAG--  229 (275)
T ss_pred             ccccccccccCCccchhHHHH-HHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcc--
Confidence             00   0    0011233332 222333332    33578999999999665432100000000    00  001111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      -+...+|||+++..+++.... ..|..+.+-++
T Consensus       230 r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        230 RPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             cCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence            257899999999998874333 35666766555

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.36  E-value=8.3e-11  Score=114.48  Aligned_cols=213  Identities=13%  Similarity=0.087  Sum_probs=129.9

Q ss_pred             CCCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +|..++++||||+  +.||..+++.|+++|++|++..|+....+.+.....+        ......+.+|++|.+++.++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~--------~~~~~~~~~Dl~~~~~v~~~   78 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAE--------LGAFVAGHCDVTDEASIDAV   78 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHh--------cCCceEEecCCCCHHHHHHH
Confidence            3566889999997  7999999999999999999887763222222221111        11234689999999988876


Q ss_pred             hc-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccC
Q 044905           79 IG-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~  134 (427)
                      ++       ..|++||++|....    ++           .+++|+.++..+++++...  +-.++|++||.+..     
T Consensus        79 ~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~-----  153 (272)
T PRK08159         79 FETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE-----  153 (272)
T ss_pred             HHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc-----
Confidence            64       47999999986531    11           5578888888888877643  22578888875421     


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEec--ccccCCCCCcccH
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVSA--EASVDANDYKVAK  206 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~~--~~~~~~~~~~i~v  206 (427)
                      .   +.+.+.  .|+.+| .+...+.+.+    ...|+++..|.||++...........  ....  ...+..  .+...
T Consensus       154 ~---~~p~~~--~Y~asK-aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p  225 (272)
T PRK08159        154 K---VMPHYN--VMGVAK-AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR--RTVTI  225 (272)
T ss_pred             c---CCCcch--hhhhHH-HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCccc--ccCCH
Confidence            0   111111  122222 2233333333    35789999999997654211000000  0000  001111  25688


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +|||++++.+++.... ..|..+.+.++.
T Consensus       226 eevA~~~~~L~s~~~~~itG~~i~vdgG~  254 (272)
T PRK08159        226 EEVGDSALYLLSDLSRGVTGEVHHVDSGY  254 (272)
T ss_pred             HHHHHHHHHHhCccccCccceEEEECCCc
Confidence            9999999999875433 356677776663

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.33  E-value=1.7e-10  Score=111.41  Aligned_cols=212  Identities=10%  Similarity=0.074  Sum_probs=124.5

Q ss_pred             CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||  ++.||.++++.|+++|++|++..|+....+.+......        ......+.+|++|.+++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~   75 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAE--------LDSELVFRCDVASDDEINQVF   75 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhc--------cCCceEEECCCCCHHHHHHHH
Confidence            45678999997  67999999999999999999887753222222221111        112236899999998888776


Q ss_pred             c-------CcCEEEEccCCCCCC----C------------CccccHHHHHHHHHHHHH---cCCCeEEEEeccccccccc
Q 044905           80 G-------NAGKVVVTIGPTEDG----P------------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~~----~------------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~  133 (427)
                      .       ++|++|||+|.....    +            .+++|+.+...+.+++..   .+-.+||++||.+...   
T Consensus        76 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~---  152 (261)
T PRK08690         76 ADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVR---  152 (261)
T ss_pred             HHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccccc---
Confidence            3       589999999875321    0            235666666666665432   1225788887665211   


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccc--eEEec--ccccCCCCCccc
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYN--VVVSA--EASVDANDYKVA  205 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~--i~~~~--~~~~~~~~~~i~  205 (427)
                        .......|.     -.| .+.+.+.+.    +...|+++..|.||+++.........  -....  ...+..  .+..
T Consensus       153 --~~~~~~~Y~-----asK-aal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~  222 (261)
T PRK08690        153 --AIPNYNVMG-----MAK-ASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR--RNVT  222 (261)
T ss_pred             --CCCCcccch-----hHH-HHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCC--CCCC
Confidence              011112222     111 123333333    33678999999999765422100000  00000  001111  2578


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+|||+++..+++.... ..|..+.+.++.
T Consensus       223 peevA~~v~~l~s~~~~~~tG~~i~vdgG~  252 (261)
T PRK08690        223 IEEVGNTAAFLLSDLSSGITGEITYVDGGY  252 (261)
T ss_pred             HHHHHHHHHHHhCcccCCcceeEEEEcCCc
Confidence            99999999999975433 356777776653

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.32  E-value=1e-10  Score=119.88  Aligned_cols=180  Identities=12%  Similarity=0.092  Sum_probs=115.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .+++|+||||||+||+++++.|+++|++|++++|+.++....... .         ..++..+.+|++|.+++.+.+.++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~-~---------~~~v~~v~~Dvsd~~~v~~~l~~I  246 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING-E---------DLPVKTLHWQVGQEAALAELLEKV  246 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh-c---------CCCeEEEEeeCCCHHHHHHHhCCC
Confidence            467899999999999999999999999999999987544322110 0         112457889999999999999999


Q ss_pred             CEEEEccCCCCCC--------CCccccHHHHHHHHHHHHH----cCC---CeEEEEecccccccccCCCCCCCCccchhh
Q 044905           83 GKVVVTIGPTEDG--------PTSEVSTSDAFQVIQAAQL----AGV---GHVAIIYDGNTTAASTYNVLDGISSFFNNL  147 (427)
Q Consensus        83 d~Vi~~ag~~~~~--------~~~~vn~~~~~~ll~Aa~~----~gV---k~~V~vSSs~v~~~~~~~~~~~~~~~~~~~  147 (427)
                      |++||++|.....        ..+++|+.++.++++++..    .+.   +.+++.+|++   +.  .  .+.    ...
T Consensus       247 DiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa---~~--~--~~~----~~~  315 (406)
T PRK07424        247 DILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEA---EV--N--PAF----SPL  315 (406)
T ss_pred             CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccc---cc--c--CCC----chH
Confidence            9999999865321        1568899999999988753    221   2233333322   11  1  011    112


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      |+.+| .+...+....+ +.+..+..+.||.+.....                +...++.+|+|+.++.++...
T Consensus       316 Y~ASK-aAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~----------------~~~~~spe~vA~~il~~i~~~  372 (406)
T PRK07424        316 YELSK-RALGDLVTLRRLDAPCVVRKLILGPFKSNLN----------------PIGVMSADWVAKQILKLAKRD  372 (406)
T ss_pred             HHHHH-HHHHHHHHHHHhCCCCceEEEEeCCCcCCCC----------------cCCCCCHHHHHHHHHHHHHCC
Confidence            33332 22333322111 3455666666775432110                112578999999999998743

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.32  E-value=1.5e-10  Score=112.85  Aligned_cols=212  Identities=8%  Similarity=0.051  Sum_probs=127.7

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||+  +.||+.+++.|+++|++|++..|+....+.+.....+.       ..+ ..+.+|++|.+++.+++
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~-------~~~-~~~~~Dv~d~~~v~~~~   74 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQEL-------GSD-YVYELDVSKPEHFKSLA   74 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc-------CCc-eEEEecCCCHHHHHHHH
Confidence            345789999997  79999999999999999999988853112222111110       011 36889999999887766


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                      +       .+|++||++|....    ++           .+++|+.+...+++++...  .-.+||++||.+-  ..   
T Consensus        75 ~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~--~~---  149 (274)
T PRK08415         75 ESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG--VK---  149 (274)
T ss_pred             HHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC--cc---
Confidence            3       57999999996421    11           5678888888887766542  1257998887641  11   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~  207 (427)
                      ......     .|+.+| .+...+.+.+    ...|+++..|.||++...........  ...  ....+..  .+...+
T Consensus       150 ~~~~~~-----~Y~asK-aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--r~~~pe  221 (274)
T PRK08415        150 YVPHYN-----VMGVAK-AALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLK--KNVSIE  221 (274)
T ss_pred             CCCcch-----hhhhHH-HHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchh--ccCCHH
Confidence            001111     122222 2233333333    35689999999997654211000000  000  0001111  256889


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.+++.... ..|..+.+.++.
T Consensus       222 dva~~v~fL~s~~~~~itG~~i~vdGG~  249 (274)
T PRK08415        222 EVGNSGMYLLSDLSSGVTGEIHYVDAGY  249 (274)
T ss_pred             HHHHHHHHHhhhhhhcccccEEEEcCcc
Confidence            999999999875333 356777776663

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.32  E-value=1.6e-10  Score=111.37  Aligned_cols=211  Identities=10%  Similarity=0.041  Sum_probs=126.4

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||+  +.||.++++.|+++|++|++..|+....+.+.....+        .....++.+|++|.+++.+++
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEE--------LDAPIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHh--------hccceEEecCcCCHHHHHHHH
Confidence            345789999998  4899999999999999999999886432222221111        112237889999998887765


Q ss_pred             -------cCcCEEEEccCCCCC----C-----------CCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 -------GNAGKVVVTIGPTED----G-----------PTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 -------~g~d~Vi~~ag~~~~----~-----------~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                             ...|++|||+|....    +           ..+++|+.+...+++++...  .-.++|++||.+..    ..
T Consensus        80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~----~~  155 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE----KV  155 (258)
T ss_pred             HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc----cC
Confidence                   357999999986431    1           15577888888887766442  12478888875421    10


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceE--Eec--ccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVV--VSA--EASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~--~~~--~~~~~~~~~~i~v~  207 (427)
                       .....     .|+-+| .+...+.+.+    ...|+++..|.||.+............  ...  ...+..  .+...+
T Consensus       156 -~~~~~-----~Y~asK-aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~  226 (258)
T PRK07533        156 -VENYN-----LMGPVK-AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLR--RLVDID  226 (258)
T ss_pred             -Cccch-----hhHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcC--CCCCHH
Confidence             11111     122221 1233333333    356899999999966442111000000  000  001111  256889


Q ss_pred             HHHHHHHHHhcCcc-cccCcEEEEecC
Q 044905          208 QIASLVADVFSNTA-VAENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~-~~~g~~~nI~~~  233 (427)
                      |||++++.++++.. ...|..+.+.++
T Consensus       227 dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        227 DVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             HHHHHHHHHhChhhccccCcEEeeCCc
Confidence            99999999887532 235677766554

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.32  E-value=1.7e-10  Score=115.10  Aligned_cols=190  Identities=14%  Similarity=0.139  Sum_probs=119.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHH---HHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AES---IAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~s---l~~a   78 (427)
                      .+.++||||||+||++++++|+++|++|++++|++++++.+......     .....++..+.+|+++  .+.   +.+.
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~-----~~~~~~~~~~~~Dl~~~~~~~~~~l~~~  127 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS-----KYSKTQIKTVVVDFSGDIDEGVKRIKET  127 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH-----HCCCcEEEEEEEECCCCcHHHHHHHHHH
Confidence            46899999999999999999999999999999998776554322110     0001234567889875  333   3344


Q ss_pred             hcC--cCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           79 IGN--AGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        79 l~g--~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                      +.+  +|++||++|....  .+           .+++|+.++.++++++.    +.+..++|++||.+.+.....   ..
T Consensus       128 ~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~---p~  204 (320)
T PLN02780        128 IEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSD---PL  204 (320)
T ss_pred             hcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCC---cc
Confidence            444  5599999986531  11           45678888888777754    456779999998753211000   11


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      ..     .|+.++ .+.+.+.+.    +...|++++.+.||++......    .    ..   ......+.+++|+.++.
T Consensus       205 ~~-----~Y~aSK-aal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~----~----~~---~~~~~~~p~~~A~~~~~  267 (320)
T PLN02780        205 YA-----VYAATK-AYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS----I----RR---SSFLVPSSDGYARAALR  267 (320)
T ss_pred             ch-----HHHHHH-HHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc----c----cC---CCCCCCCHHHHHHHHHH
Confidence            11     222222 223333333    3357899999999976543211    0    00   01113588999999998


Q ss_pred             Hhc
Q 044905          216 VFS  218 (427)
Q Consensus       216 al~  218 (427)
                      .+.
T Consensus       268 ~~~  270 (320)
T PLN02780        268 WVG  270 (320)
T ss_pred             HhC
Confidence            885

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.31  E-value=2.6e-10  Score=117.20  Aligned_cols=242  Identities=13%  Similarity=0.143  Sum_probs=149.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcch---HHHHHHHHhh--hhh---hhhhhhccceEEEecCCC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGA---AQELARLAAS--YKI---LSKEELKRLNAVESNFDS   71 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~---~~~l~~~~~~--~~~---~~~~~~~rl~vv~gDl~D   71 (427)
                      ..++|||||||||+|.-+++.||+.-   -.|+.+.|....   -+.+.....+  +..   ..++-..++..+.||+.+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            35799999999999999999999863   578888887752   1222221111  111   122235788899999986


Q ss_pred             ------HHHHHHHhcCcCEEEEccCCCCCCC----CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccCCC----
Q 044905           72 ------AESIAKAIGNAGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTYNV----  136 (427)
Q Consensus        72 ------~~sl~~al~g~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~~~----  136 (427)
                            ...+......+++|||+|+....+.    ...+|+.|+.++++.|++. ..+-++++|+....  +....    
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n--~~~~~i~E~  168 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN--CNVGHIEEK  168 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee--ccccccccc
Confidence                  3455567788999999999877654    5678999999999999987 47889999876542  21100    


Q ss_pred             --CCCC---------------------------Cccch-hhhhccccccHHHHHHHHhcCCCeEEEEeCCC-C---CCCC
Q 044905          137 --LDGI---------------------------SSFFN-NLFSRNQPLTVPEFLQKVIETDVSYTFIKTSL-T---EDFS  182 (427)
Q Consensus       137 --~~~~---------------------------~~~~~-~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~-~---~~~~  182 (427)
                        ..+.                           ..+.+ ..|.|..   +|.++.. ...+++++|+||+. .   .+..
T Consensus       169 ~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal---~E~~i~~-~~~~lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  169 PYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKAL---AEMVIQK-EAENLPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             ccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhh---HHHHHHh-hccCCCeEEEcCCceeccccCCC
Confidence              0000                           00111 1233332   5655544 25679999999862 1   1222


Q ss_pred             CCCccc------eEE-eccc-------ccCCCCCcccHHHHHHHHHHHhcCccc----ccCcEEEEecCCCCChhhHHHH
Q 044905          183 PESSYN------VVV-SAEA-------SVDANDYKVAKSQIASLVADVFSNTAV----AENKVVKVFTDPSAPARRVDEL  244 (427)
Q Consensus       183 ~~~~~~------i~~-~~~~-------~~~~~~~~i~v~DVA~~v~~al~~~~~----~~g~~~nI~~~~~~~~~s~~el  244 (427)
                      ++|..+      +.. .|.+       ++..-.+.|++|.|+.+++.+.-....    ....+||++++... +.+|.++
T Consensus       245 pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~N-p~t~~~~  323 (467)
T KOG1221|consen  245 PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDN-PVTWGDF  323 (467)
T ss_pred             CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccC-cccHHHH
Confidence            223221      111 1111       122223689999999998855421111    12469999997544 5678888


Q ss_pred             HHHHHhc
Q 044905          245 FSAIAED  251 (427)
Q Consensus       245 l~~i~~~  251 (427)
                      .......
T Consensus       324 ~e~~~~~  330 (467)
T KOG1221|consen  324 IELALRY  330 (467)
T ss_pred             HHHHHHh
Confidence            8776544

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.31  E-value=1.6e-10  Score=111.39  Aligned_cols=212  Identities=11%  Similarity=0.094  Sum_probs=126.6

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +..++++||||+  +.||..+++.|+++|++|++..|+...  ..........       ...+..++.+|++|.+++.+
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~v~~   76 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTE-------PLNPSLFLPCDVQDDAQIEE   76 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHh-------ccCcceEeecCcCCHHHHHH
Confidence            345789999986  799999999999999999887765431  1111111000       01123478999999998887


Q ss_pred             Hhc-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEeccccccccc
Q 044905           78 AIG-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        78 al~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~  133 (427)
                      +++       .+|++|||+|....    ++           .+++|+.+...+++++...  .-.+||++||.+..  . 
T Consensus        77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~--~-  153 (258)
T PRK07370         77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGV--R-  153 (258)
T ss_pred             HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccc--c-
Confidence            664       57999999996421    11           5578888888887766432  12589999876421  1 


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEec--ccccCCCCCccc
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVSA--EASVDANDYKVA  205 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~~--~~~~~~~~~~i~  205 (427)
                        ......     .|+.+| .+.+.+.+.+    ...|+++..|.||++.........+.  ....  ...+..  -+..
T Consensus       154 --~~~~~~-----~Y~asK-aal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~  223 (258)
T PRK07370        154 --AIPNYN-----VMGVAK-AALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLR--RTVT  223 (258)
T ss_pred             --CCcccc-----hhhHHH-HHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcC--cCCC
Confidence              011111     222222 2234444443    35689999999997654221000000  0000  001111  2567


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+|||.++..++++... ..|..+.+.++
T Consensus       224 ~~dva~~~~fl~s~~~~~~tG~~i~vdgg  252 (258)
T PRK07370        224 QTEVGNTAAFLLSDLASGITGQTIYVDAG  252 (258)
T ss_pred             HHHHHHHHHHHhChhhccccCcEEEECCc
Confidence            89999999998875333 35677777555

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.31  E-value=2.3e-10  Score=110.91  Aligned_cols=211  Identities=12%  Similarity=0.108  Sum_probs=124.7

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ++.++++||||++  .||+++++.|+++|++|++..|+....+.+......        ..+..++.+|++|.+++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~v~~~~   75 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--------LGSDIVLPCDVAEDASIDAMF   75 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhc--------cCCceEeecCCCCHHHHHHHH
Confidence            4567899999985  899999999999999999888873211111111110        122347889999999988776


Q ss_pred             c-------CcCEEEEccCCCCCCC----------------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccC
Q 044905           80 G-------NAGKVVVTIGPTEDGP----------------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~~~----------------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~  134 (427)
                      +       .+|++||++|.....+                .+++|+.+...+.+++...  .-.+||++||.+.  ..  
T Consensus        76 ~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~--~~--  151 (262)
T PRK07984         76 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ER--  151 (262)
T ss_pred             HHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC--CC--
Confidence            3       4799999998643210                2355666666676665431  1257888887652  11  


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccce--EEec--ccccCCCCCcccH
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNV--VVSA--EASVDANDYKVAK  206 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i--~~~~--~~~~~~~~~~i~v  206 (427)
                      . ......     |+.+| .+.+.+.+.+.    ..|+++..|.||++...........  ....  ...+..  .+...
T Consensus       152 ~-~~~~~~-----Y~asK-aal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p  222 (262)
T PRK07984        152 A-IPNYNV-----MGLAK-ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR--RTVTI  222 (262)
T ss_pred             C-CCCcch-----hHHHH-HHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCc--CCCCH
Confidence            0 111112     22221 22444444433    5689999999997654211000000  0000  001111  35688


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|||.+++.++++... ..|..+.+.++
T Consensus       223 edva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        223 EDVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             HHHHHHHHHHcCcccccccCcEEEECCC
Confidence            9999999999875333 35666666555

>PRK06484 short chain dehydrogenase; Validated

Probab=99.30  E-value=1.3e-10  Score=122.92  Aligned_cols=198  Identities=17%  Similarity=0.134  Sum_probs=123.5

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |...++++||||++.||..+++.|+++|++|+++.|+.+.+..+....          ..++..+.+|++|++++.++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~   71 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----------GPDHHALAMDVSDEAQIREGFE   71 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceeEEEeccCCHHHHHHHHH
Confidence            345678999999999999999999999999999999987655443211          1123478999999998877664


Q ss_pred             -------CcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHHHHc----CCC-eEEEEecccccccccCC
Q 044905           81 -------NAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAAQLA----GVG-HVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa~~~----gVk-~~V~vSSs~v~~~~~~~  135 (427)
                             ++|++||++|....  .+           .+++|+.++..+++++...    +-. ++|++||.......   
T Consensus        72 ~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~---  148 (520)
T PRK06484         72 QLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL---  148 (520)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC---
Confidence                   58999999986321  11           4567888888888777543    333 89999877632111   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc---eEEecccccCCCCCcccHHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN---VVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~---i~~~~~~~~~~~~~~i~v~D  208 (427)
                        .....|.     ..+ .+.+.+.+.+    ...+++++.|.||++..........   ..............+.+.+|
T Consensus       149 --~~~~~Y~-----asK-aal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (520)
T PRK06484        149 --PKRTAYS-----ASK-AAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEE  220 (520)
T ss_pred             --CCCchHH-----HHH-HHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHH
Confidence              1112222     221 1233433333    3568999999999664422110000   00000000000012468899


Q ss_pred             HHHHHHHHhcC
Q 044905          209 IASLVADVFSN  219 (427)
Q Consensus       209 VA~~v~~al~~  219 (427)
                      +|+++..++..
T Consensus       221 va~~v~~l~~~  231 (520)
T PRK06484        221 IAEAVFFLASD  231 (520)
T ss_pred             HHHHHHHHhCc
Confidence            99999988764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=2.5e-10  Score=110.23  Aligned_cols=211  Identities=9%  Similarity=0.094  Sum_probs=125.2

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||++  .||.++++.|+++|++|++..|+....+.+......        .....++.+|++|++++.+++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~--------~g~~~~~~~Dv~~~~~v~~~~   77 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEE--------IGCNFVSELDVTNPKSISNLF   77 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHh--------cCCceEEEccCCCHHHHHHHH
Confidence            5567899999997  899999999999999999888874211112111111        011125789999999888776


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                      +       .+|++||++|....    .+           .+++|+.+...+++++...  .-.+||++||.+...     
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~-----  152 (260)
T PRK06603         78 DDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK-----  152 (260)
T ss_pred             HHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc-----
Confidence            3       48999999986421    11           4567777777777765332  125899998765211     


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceE--Eec--ccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVV--VSA--EASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~--~~~--~~~~~~~~~~i~v~  207 (427)
                      .......     |+.+| .+.+.+.+.    +...|+++..|.||++............  ...  ...+..  .+...+
T Consensus       153 ~~~~~~~-----Y~asK-aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~pe  224 (260)
T PRK06603        153 VIPNYNV-----MGVAK-AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLK--RNTTQE  224 (260)
T ss_pred             CCCcccc-----hhhHH-HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcC--CCCCHH
Confidence            0111122     22222 123333333    3357899999999976542110000000  000  001111  256899


Q ss_pred             HHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          208 QIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      |||++++.+++....+ .|..+.+.++
T Consensus       225 dva~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        225 DVGGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             HHHHHHHHHhCcccccCcceEEEeCCc
Confidence            9999999999754333 5666777655

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.30  E-value=2.8e-10  Score=109.73  Aligned_cols=209  Identities=13%  Similarity=0.105  Sum_probs=125.2

Q ss_pred             CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcc---hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            3 DSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELG---AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         3 ~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~---~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      ..++++||||+  +.||.++++.|+++|++|+++.|+..   .++++....         ...++.++.+|++|.+++.+
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~Dv~d~~~v~~   76 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL---------EGQESLLLPCDVTSDEEITA   76 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc---------CCCceEEEecCCCCHHHHHH
Confidence            45789999997  89999999999999999999887542   223332210         01345678999999988877


Q ss_pred             Hhc-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEeccccccccc
Q 044905           78 AIG-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        78 al~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~  133 (427)
                      +++       .+|++|||+|....    ++           .+++|+.+...+++++...  .-.+||++||....  ..
T Consensus        77 ~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~--~~  154 (257)
T PRK08594         77 CFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE--RV  154 (257)
T ss_pred             HHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc--cC
Confidence            663       47999999986431    11           3456666666666665542  12589999876521  10


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceE--Eec--ccccCCCCCccc
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVV--VSA--EASVDANDYKVA  205 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~--~~~--~~~~~~~~~~i~  205 (427)
                         ......|     +.+| .+.+.+.+.+    ...|+++..|.||++............  ...  ...+..  .+..
T Consensus       155 ---~~~~~~Y-----~asK-aal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~  223 (257)
T PRK08594        155 ---VQNYNVM-----GVAK-ASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLR--RTTT  223 (257)
T ss_pred             ---CCCCchh-----HHHH-HHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCcc--ccCC
Confidence               1111222     2222 2233333333    356899999999976542110000000  000  000111  2568


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+|+|++++.+++.... ..|..+.+.++
T Consensus       224 p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        224 QEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             HHHHHHHHHHHcCcccccccceEEEECCc
Confidence            89999999998874333 35666766554

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.29  E-value=4.5e-10  Score=108.46  Aligned_cols=212  Identities=11%  Similarity=0.082  Sum_probs=125.7

Q ss_pred             CCCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |+..++++||||  ++.||.++++.|+++|++|++..|.....+.+.....+        ......+.+|++|++++.++
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~   74 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE--------FGSDLVFPCDVASDEQIDAL   74 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHh--------cCCcceeeccCCCHHHHHHH
Confidence            355678999996  67999999999999999999876542111222111111        01113688999999988877


Q ss_pred             hc-------CcCEEEEccCCCCCC----------C------CccccHHHHHHHHHHHHHc--CCCeEEEEeccccccccc
Q 044905           79 IG-------NAGKVVVTIGPTEDG----------P------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~~----------~------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~  133 (427)
                      ++       ..|++||++|.....          .      .+++|+.+...+++++...  +-.++|++||.+..  . 
T Consensus        75 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~--~-  151 (260)
T PRK06997         75 FASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE--R-  151 (260)
T ss_pred             HHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccc--c-
Confidence            64       589999999864310          0      3567777887777776542  23579999876521  1 


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccce--EEec--ccccCCCCCccc
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNV--VVSA--EASVDANDYKVA  205 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i--~~~~--~~~~~~~~~~i~  205 (427)
                       . ......     |+-+| .+...+.+.    +...|+++..|.||+++..........  ....  ...+..  .+..
T Consensus       152 -~-~~~~~~-----Y~asK-aal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~  221 (260)
T PRK06997        152 -V-VPNYNT-----MGLAK-ASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLR--RNVT  221 (260)
T ss_pred             -C-CCCcch-----HHHHH-HHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCccc--ccCC
Confidence             1 111112     22221 123333333    335689999999997654221100000  0000  001111  2568


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+|||+++..+++.... ..|.++.+.++
T Consensus       222 pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        222 IEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             HHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence            99999999999875333 35667766555

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.29  E-value=7.8e-11  Score=104.71  Aligned_cols=159  Identities=15%  Similarity=0.153  Sum_probs=107.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      ++++|+||||++|.++++.|+++|+ .|+.+.|+.............   +. ....++.++.+|+++.+.+.+++.   
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~---~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAE---LE-ALGAEVTVVACDVADRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHH---HH-hcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4799999999999999999999996 688888876532211110000   00 012345678999999888877654   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccch
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                          .+|.+||++|.....+           .+++|+.+..++++++...+.++++++||.+...+.     .....   
T Consensus        77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~-----~~~~~---  148 (180)
T smart00822       77 ARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN-----PGQAN---  148 (180)
T ss_pred             HHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC-----CCchh---
Confidence                3699999998643211           467888899999999988888899998876521111     11111   


Q ss_pred             hhhhccccccHHHHHHHHhcCCCeEEEEeCCCC
Q 044905          146 NLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLT  178 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~  178 (427)
                        |...+ ...+.+.+.+...+++++.+.||..
T Consensus       149 --y~~sk-~~~~~~~~~~~~~~~~~~~~~~g~~  178 (180)
T smart00822      149 --YAAAN-AFLDALAAHRRARGLPATSINWGAW  178 (180)
T ss_pred             --hHHHH-HHHHHHHHHHHhcCCceEEEeeccc
Confidence              11111 2355666666678999999998854

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.27  E-value=1.7e-10  Score=109.07  Aligned_cols=198  Identities=9%  Similarity=0.127  Sum_probs=119.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH---h
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA---I   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a---l   79 (427)
                      |+|+||||||+||++++++|+++|  +.|.+..|+...  ...             ..++.++.+|++|.+++.++   +
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~~~-------------~~~~~~~~~Dls~~~~~~~~~~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--DFQ-------------HDNVQWHALDVTDEAEIKQLSEQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--ccc-------------cCceEEEEecCCCHHHHHHHHHhc
Confidence            589999999999999999999985  566666665432  110             12446899999998887664   4


Q ss_pred             cCcCEEEEccCCCCCC------C-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           80 GNAGKVVVTIGPTEDG------P-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~------~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                      .++|+|||++|.....      .           .+.+|+.+...+++++..    .+..+++++||..  +.....   
T Consensus        66 ~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~~~~---  140 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSISDN---  140 (235)
T ss_pred             CCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--cccccC---
Confidence            5789999999976321      0           234566666666665543    3456788887643  111101   


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----c--CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----E--TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~--~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      +.+.+.  .|+.++ ...+.+.+.+.    .  .++.+..+.||+++.....   ...   ......  .+++.+|+|+.
T Consensus       141 ~~~~~~--~Y~asK-~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~---~~~---~~~~~~--~~~~~~~~a~~  209 (235)
T PRK09009        141 RLGGWY--SYRASK-AALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSK---PFQ---QNVPKG--KLFTPEYVAQC  209 (235)
T ss_pred             CCCCcc--hhhhhH-HHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCc---chh---hccccC--CCCCHHHHHHH
Confidence            111111  222222 23455555443    2  4788999999976543211   110   011111  26789999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecC
Q 044905          213 VADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++.++..... ..|..+.+.++
T Consensus       210 ~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        210 LLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             HHHHHHcCChhhCCcEEeeCCc
Confidence            9998875422 35566655444

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.27  E-value=1e-10  Score=112.40  Aligned_cols=205  Identities=13%  Similarity=0.103  Sum_probs=122.1

Q ss_pred             EEEEEcCCcHHHHHHHHHHHH----CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLR----EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~----~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .++||||||+||.+++++|++    +|++|+++.|+.+.+..+......     .....++.++.+|++|.+++.++++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~v~~~~~Dl~~~~~v~~~~~~   76 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGA-----ERSGLRVVRVSLDLGAEAGLEQLLKA   76 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHh-----cCCCceEEEEEeccCCHHHHHHHHHH
Confidence            589999999999999999997    799999999998765544321110     00012456889999999988876642


Q ss_pred             -----------cCEEEEccCCCCC-----C---C------CccccHHHHHHHHHHHHH----c-C-CCeEEEEecccccc
Q 044905           82 -----------AGKVVVTIGPTED-----G---P------TSEVSTSDAFQVIQAAQL----A-G-VGHVAIIYDGNTTA  130 (427)
Q Consensus        82 -----------~d~Vi~~ag~~~~-----~---~------~~~vn~~~~~~ll~Aa~~----~-g-Vk~~V~vSSs~v~~  130 (427)
                                 .|++||++|....     .   .      .+++|+.++..+++++..    . + -.+||++||.+...
T Consensus        77 ~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~  156 (256)
T TIGR01500        77 LRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQ  156 (256)
T ss_pred             HHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCC
Confidence                       1589999985321     1   0      445777787777665543    2 2 25799888765211


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc----c-eEEec--ccccCC
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY----N-VVVSA--EASVDA  199 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~----~-i~~~~--~~~~~~  199 (427)
                      .     .....     .|+.++ .+.+.+.+.+    ...|+.+..+.||++.........    . -....  ...+..
T Consensus       157 ~-----~~~~~-----~Y~asK-aal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (256)
T TIGR01500       157 P-----FKGWA-----LYCAGK-AARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKG  225 (256)
T ss_pred             C-----CCCch-----HHHHHH-HHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcC
Confidence            1     01111     222222 2234444443    356899999999977542110000    0 00000  000111


Q ss_pred             CCCcccHHHHHHHHHHHhcCcccccCcEE
Q 044905          200 NDYKVAKSQIASLVADVFSNTAVAENKVV  228 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~~~g~~~  228 (427)
                        .+...+|+|..++.++.+..-..|..+
T Consensus       226 --~~~~p~eva~~~~~l~~~~~~~~G~~~  252 (256)
T TIGR01500       226 --KLVDPKVSAQKLLSLLEKDKFKSGAHV  252 (256)
T ss_pred             --CCCCHHHHHHHHHHHHhcCCcCCccee
Confidence              267899999999998864322344444

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.26  E-value=3.2e-10  Score=109.21  Aligned_cols=210  Identities=12%  Similarity=0.078  Sum_probs=125.5

Q ss_pred             CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +..++++||||  ++.||.++++.|+++|++|++..|+..  ..+.+....          ..++.++.+|++|++++.+
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~i~~   74 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----------PEPAPVLELDVTNEEHLAS   74 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----------CCCCcEEeCCCCCHHHHHH
Confidence            34578999999  899999999999999999999988642  223332110          1134589999999998877


Q ss_pred             Hhc-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEeccccccccc
Q 044905           78 AIG-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        78 al~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~  133 (427)
                      +++       .+|++||++|....    .+           .+++|+.+...+++++...  .-.++|++|+.+..    
T Consensus        75 ~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~----  150 (256)
T PRK07889         75 LADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV----  150 (256)
T ss_pred             HHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc----
Confidence            653       58999999987531    11           3567777777777766432  12478888754310    


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceE-EecccccCCCC--CcccH
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVV-VSAEASVDAND--YKVAK  206 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~-~~~~~~~~~~~--~~i~v  206 (427)
                           +.+.|.  .|+.+| .+...+.+.    +...|+++..|.||++............ .........+.  .+.+.
T Consensus       151 -----~~~~~~--~Y~asK-aal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p  222 (256)
T PRK07889        151 -----AWPAYD--WMGVAK-AALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDP  222 (256)
T ss_pred             -----cCCccc--hhHHHH-HHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCH
Confidence                 011111  122221 123333333    3357899999999976542111000000 00000001111  25789


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|||+.++.++++... ..|.++.+.++
T Consensus       223 ~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        223 TPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             HHHHHHHHHHhCcccccccceEEEEcCc
Confidence            9999999999875433 35666666554

>PRK05599 hypothetical protein; Provisional

Probab=99.25  E-value=5.6e-10  Score=106.81  Aligned_cols=187  Identities=13%  Similarity=0.103  Sum_probs=115.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+++||||++.||..+++.|. +|++|+++.|+.++++.+......      ....++.++.+|++|.+++.++++    
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   73 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQ------RGATSVHVLSFDAQDLDTHRELVKQTQE   73 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh------ccCCceEEEEcccCCHHHHHHHHHHHHH
Confidence            579999999999999999998 599999999998766554332111      001235688999999888877653    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcC-CCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAG-VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         ..|++||++|.....+           ...+|+.+...++.+    +.+.+ -.+||++||......     .....
T Consensus        74 ~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----~~~~~  148 (246)
T PRK05599         74 LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA-----RRANY  148 (246)
T ss_pred             hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC-----CcCCc
Confidence               5899999999753211           123444455444433    33333 368999988752111     01112


Q ss_pred             ccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHh
Q 044905          142 SFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      .|.....      +.+.+.+.    +...|+++..+.||++.....   ...      .. .+ .....+|+|+.++.++
T Consensus       149 ~Y~asKa------a~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~---~~~------~~-~~-~~~~pe~~a~~~~~~~  211 (246)
T PRK05599        149 VYGSTKA------GLDAFCQGLADSLHGSHVRLIIARPGFVIGSMT---TGM------KP-AP-MSVYPRDVAAAVVSAI  211 (246)
T ss_pred             chhhHHH------HHHHHHHHHHHHhcCCCceEEEecCCcccchhh---cCC------CC-CC-CCCCHHHHHHHHHHHH
Confidence            2222111      22333333    335689999999997654211   000      00 01 1257899999999988


Q ss_pred             cCc
Q 044905          218 SNT  220 (427)
Q Consensus       218 ~~~  220 (427)
                      ...
T Consensus       212 ~~~  214 (246)
T PRK05599        212 TSS  214 (246)
T ss_pred             hcC
Confidence            753

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.22  E-value=6.6e-10  Score=110.42  Aligned_cols=118  Identities=14%  Similarity=0.125  Sum_probs=86.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +++++|||||+.||.++++.|+++| ++|+++.|+..+...+......       ...++.++.+|++|.+++..++   
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~   75 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-------PKDSYTIMHLDLGSLDSVRQFVQQF   75 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-------CCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            6689999999999999999999999 9999999987765444321100       0134567899999998887665   


Q ss_pred             ----cCcCEEEEccCCCCCC-------C-----CccccHHHHHHHHHHHH----HcC--CCeEEEEecccc
Q 044905           80 ----GNAGKVVVTIGPTEDG-------P-----TSEVSTSDAFQVIQAAQ----LAG--VGHVAIIYDGNT  128 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~-------~-----~~~vn~~~~~~ll~Aa~----~~g--Vk~~V~vSSs~v  128 (427)
                          .++|++||++|.....       .     .+++|+.+...+++++.    +.+  ..+||++||...
T Consensus        76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~  146 (314)
T TIGR01289        76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG  146 (314)
T ss_pred             HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc
Confidence                3589999999964210       0     35788878777765543    332  469999998764

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.15  E-value=7e-10  Score=98.97  Aligned_cols=116  Identities=24%  Similarity=0.264  Sum_probs=88.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecC--cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPE--LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~--~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++++||||+|.||..++++|+++| +.|+++.|+  .+....+......       ...++.++.+|++|.+++..+++ 
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~   73 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA-------PGAKITFIECDLSDPESIRALIEE   73 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH-------TTSEEEEEESETTSHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc-------cccccccccccccccccccccccc
Confidence            479999999999999999999995 688888888  3333433221111       12567789999999988887764 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                            ..|++||++|....++           .+.+|+.+...+.+++...+-.+||++||..
T Consensus        74 ~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~  137 (167)
T PF00106_consen   74 VIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIA  137 (167)
T ss_dssp             HHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGG
T ss_pred             cccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchh
Confidence                  5799999999877433           5567777888888888776677899998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.14  E-value=2.2e-09  Score=101.72  Aligned_cols=157  Identities=12%  Similarity=0.079  Sum_probs=99.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      ..++++||||++.||..+++.|+++|++|+++.|+.++++.+.......       ..++..+.+|+.|.+++.+++   
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   76 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL-------TDNVYSFQLKDFSQESIRHLFDAI   76 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-------CCCeEEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987665543221110       123446789999999887665   


Q ss_pred             ----c-CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHH----HHHHcC-CCeEEEEecccccccccCCCC
Q 044905           80 ----G-NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQ----AAQLAG-VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        80 ----~-g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~----Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                          . ..|++||++|.... .+           .+.+|..+...+++    .+.+.+ -..+|++||....     .  
T Consensus        77 ~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-----~--  149 (227)
T PRK08862         77 EQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-----Q--  149 (227)
T ss_pred             HHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-----C--
Confidence                3 68999999974321 11           12233334444433    333333 4588988875421     0  


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCC
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTED  180 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~  180 (427)
                       ....|..     .+ .+.+.+.+.+    ...|+++..|.||++..
T Consensus       150 -~~~~Y~a-----sK-aal~~~~~~la~el~~~~Irvn~v~PG~i~t  189 (227)
T PRK08862        150 -DLTGVES-----SN-ALVSGFTHSWAKELTPFNIRVGGVVPSIFSA  189 (227)
T ss_pred             -CcchhHH-----HH-HHHHHHHHHHHHHHhhcCcEEEEEecCcCcC
Confidence             1122221     11 1233333333    35689999999997655

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.11  E-value=3.7e-09  Score=104.79  Aligned_cols=202  Identities=16%  Similarity=0.077  Sum_probs=116.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc----------hHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG----------AAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~----------~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      ..++++||||++.||.++++.|++.|++|+++.|+..          ....+......       ...++.++.+|++|.
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~~~   79 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-------AGGRGIAVQVDHLVP   79 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-------cCCceEEEEcCCCCH
Confidence            3578999999999999999999999999999999742          22222211110       012345789999999


Q ss_pred             HHHHHHhc-------CcCEEEEcc-CCCC----CCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEec
Q 044905           73 ESIAKAIG-------NAGKVVVTI-GPTE----DGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYD  125 (427)
Q Consensus        73 ~sl~~al~-------g~d~Vi~~a-g~~~----~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSS  125 (427)
                      +++.++++       .+|++||++ |...    ..+           .+++|+.+...+++++.    +.+-.+||++||
T Consensus        80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS  159 (305)
T PRK08303         80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITD  159 (305)
T ss_pred             HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECC
Confidence            88887653       589999999 6321    111           23456666666665553    333468998887


Q ss_pred             ccccccccCCCCCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCc---cceEEecccccC
Q 044905          126 GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESS---YNVVVSAEASVD  198 (427)
Q Consensus       126 s~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~---~~i~~~~~~~~~  198 (427)
                      .......  ........     |+.++ .+...+.+    .+...|+++..|.||++........   ..-...... ..
T Consensus       160 ~~~~~~~--~~~~~~~~-----Y~asK-aal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~  230 (305)
T PRK08303        160 GTAEYNA--THYRLSVF-----YDLAK-TSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AK  230 (305)
T ss_pred             ccccccC--cCCCCcch-----hHHHH-HHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-cc
Confidence            5421110  00001111     22222 12233333    2335689999999996644211000   000000000 00


Q ss_pred             CC-C-CcccHHHHHHHHHHHhcCc
Q 044905          199 AN-D-YKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       199 ~~-~-~~i~v~DVA~~v~~al~~~  220 (427)
                      .+ . -....+|+|.+++.+++++
T Consensus       231 ~p~~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        231 EPHFAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             ccccccCCCHHHHHHHHHHHHcCc
Confidence            11 0 1347899999999998754

>PLN00015 protochlorophyllide reductase

Probab=99.06  E-value=4.6e-09  Score=104.05  Aligned_cols=113  Identities=13%  Similarity=0.160  Sum_probs=82.6

Q ss_pred             EEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc------
Q 044905            8 FVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG------   80 (427)
Q Consensus         8 lItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~------   80 (427)
                      +|||||+.||.+++++|+++| ++|++..|+.+....+......       ...++.++.+|++|.+++.++++      
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   73 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-------PKDSYTVMHLDLASLDSVRQFVDNFRRSG   73 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-------CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence            699999999999999999999 9999999987655444321110       01345678999999998877663      


Q ss_pred             -CcCEEEEccCCCCCC-C-----------CccccHHHHHHHHHHH----HHcC--CCeEEEEeccc
Q 044905           81 -NAGKVVVTIGPTEDG-P-----------TSEVSTSDAFQVIQAA----QLAG--VGHVAIIYDGN  127 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~-~-----------~~~vn~~~~~~ll~Aa----~~~g--Vk~~V~vSSs~  127 (427)
                       ++|++||++|..... +           .+++|+.+...+++++    +..+  ..+||++||..
T Consensus        74 ~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~  139 (308)
T PLN00015         74 RPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSIT  139 (308)
T ss_pred             CCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccc
Confidence             579999999964321 1           4568888877776554    3344  46899999875

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.06  E-value=1.2e-08  Score=98.72  Aligned_cols=193  Identities=13%  Similarity=0.116  Sum_probs=123.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----   79 (427)
                      ...||||||++.+|+.++.+|+++|..+.+.+.+.+...+.......        ..+.....+|++|.+.+.+..    
T Consensus        38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~--------~g~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK--------IGEAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh--------cCceeEEEecCCCHHHHHHHHHHHH
Confidence            35799999999999999999999999999999888754443332111        013457899999988776654    


Q ss_pred             ---cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           80 ---GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 ---~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         ..+|++|++||......           .+++|+.+....++    .+.+.+-.|+|-|+|+.-..+.     .+..
T Consensus       110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~-----~gl~  184 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGP-----AGLA  184 (300)
T ss_pred             HhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCC-----ccch
Confidence               46899999999876522           66777777666554    4455667899999877622221     1223


Q ss_pred             ccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                      .|..+.++-.-  -.|-+...++   ..|++.|.+.|+++++..   ..+   ..+....-  +.+..+.+|+-++.++.
T Consensus       185 ~YcaSK~a~vG--fhesL~~EL~~~~~~~IktTlv~P~~i~Tgm---f~~---~~~~~~l~--P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  185 DYCASKFAAVG--FHESLSMELRALGKDGIKTTLVCPYFINTGM---FDG---ATPFPTLA--PLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             hhhhhHHHHHH--HHHHHHHHHHhcCCCCeeEEEEeeeeccccc---cCC---CCCCcccc--CCCCHHHHHHHHHHHHH
Confidence            33333222100  0112222222   457999999999876421   111   11222222  47899999999998775


Q ss_pred             C
Q 044905          219 N  219 (427)
Q Consensus       219 ~  219 (427)
                      .
T Consensus       255 ~  255 (300)
T KOG1201|consen  255 T  255 (300)
T ss_pred             c
Confidence            3

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.03  E-value=1.1e-08  Score=99.46  Aligned_cols=157  Identities=20%  Similarity=0.247  Sum_probs=113.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .+-|||||+....|+.++.+|.++|+.|.+..-.++.++.|.....         .+|+..+..|+++++++.++.+   
T Consensus        29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---------s~rl~t~~LDVT~~esi~~a~~~V~   99 (322)
T KOG1610|consen   29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---------SPRLRTLQLDVTKPESVKEAAQWVK   99 (322)
T ss_pred             CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---------CCcceeEeeccCCHHHHHHHHHHHH
Confidence            3569999999999999999999999999999977766666643221         4688899999999999999875   


Q ss_pred             ------CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            +.-.||||||... .++           ..++|+.|++++..+...   .--.|+|.+||.+  +   ....+.
T Consensus       100 ~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~--G---R~~~p~  174 (322)
T KOG1610|consen  100 KHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL--G---RVALPA  174 (322)
T ss_pred             HhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc--c---CccCcc
Confidence                  4568999999543 232           678999999888776632   2235899999876  2   222223


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTED  180 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~  180 (427)
                      ..+|..+.++      .|.+...+    ...|+++.+|-||++..
T Consensus       175 ~g~Y~~SK~a------Veaf~D~lR~EL~~fGV~VsiiePG~f~T  213 (322)
T KOG1610|consen  175 LGPYCVSKFA------VEAFSDSLRRELRPFGVKVSIIEPGFFKT  213 (322)
T ss_pred             cccchhhHHH------HHHHHHHHHHHHHhcCcEEEEeccCcccc
Confidence            3445444444      44444433    36799999999995443

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.01  E-value=1.5e-08  Score=100.54  Aligned_cols=170  Identities=12%  Similarity=0.142  Sum_probs=110.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++|||||+.||..+++.|..+|.+|+...|+..+..+.......     .....++.++.+|+.|.+++.++.+   
T Consensus        35 ~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-----~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   35 GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-----GKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-----cCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999998765444332111     1223456679999999999988764   


Q ss_pred             ----CcCEEEEccCCCCCCC---------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCCCCc-
Q 044905           81 ----NAGKVVVTIGPTEDGP---------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDGISS-  142 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~---------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~-  142 (427)
                          ..|++|++||......         .+.+|+.|...|.+    .++.+.-.|||++||..-..........+... 
T Consensus       110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~  189 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAK  189 (314)
T ss_pred             hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhcc
Confidence                4799999999765421         55677777665544    45555547999999876301111111111111 


Q ss_pred             -cch-hhhhcccccc----HHHHHHHHhcCCCeEEEEeCCCCCC
Q 044905          143 -FFN-NLFSRNQPLT----VPEFLQKVIETDVSYTFIKTSLTED  180 (427)
Q Consensus       143 -~~~-~~~~k~~~l~----~E~~l~~l~~~gl~~tilRPG~~~~  180 (427)
                       +.. ..|+.++ ++    ..++.+.+.. |+.+..+-||.+..
T Consensus       190 ~~~~~~~Y~~SK-la~~l~~~eL~k~l~~-~V~~~~~hPG~v~t  231 (314)
T KOG1208|consen  190 LYSSDAAYALSK-LANVLLANELAKRLKK-GVTTYSVHPGVVKT  231 (314)
T ss_pred             CccchhHHHHhH-HHHHHHHHHHHHHhhc-CceEEEECCCcccc
Confidence             211 2244443 22    2333344434 89999999996654

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.00  E-value=1e-08  Score=93.07  Aligned_cols=209  Identities=17%  Similarity=0.144  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..+..+||||+..||++|+..|.+.|++|.+..++...+++.......        +.....+.+|+.+.+++...++  
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g--------~~~h~aF~~DVS~a~~v~~~l~e~   84 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG--------YGDHSAFSCDVSKAHDVQNTLEEM   84 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC--------CCccceeeeccCcHHHHHHHHHHH
Confidence            356789999999999999999999999999999988765554433222        1223478999999887776554  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----CCC--eEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----GVG--HVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----gVk--~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ..+++++|+|.+..+-           ...+|+.++..+.+++.+.    +..  .||-+||..---++.     
T Consensus        85 ~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~-----  159 (256)
T KOG1200|consen   85 EKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNF-----  159 (256)
T ss_pred             HHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccc-----
Confidence                 4799999999876532           4567777887777777654    222  788888764211111     


Q ss_pred             CCCccch-----hhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHH
Q 044905          139 GISSFFN-----NLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       139 ~~~~~~~-----~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~  211 (427)
                      +...|..     --|.+.       ..+.+...++++-.+-|||+........++-+...  ...+..  .+=..++||.
T Consensus       160 GQtnYAAsK~GvIgftkt-------aArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmg--r~G~~EevA~  230 (256)
T KOG1200|consen  160 GQTNYAASKGGVIGFTKT-------AARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMG--RLGEAEEVAN  230 (256)
T ss_pred             cchhhhhhcCceeeeeHH-------HHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCcc--ccCCHHHHHH
Confidence            1122221     112221       22344568899999999987654332222111110  001111  1347899999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      .+..+.++... ..|..+++.++
T Consensus       231 ~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  231 LVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             HHHHHhccccccccceeEEEecc
Confidence            99887764332 25788888776

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.97  E-value=2.7e-08  Score=96.65  Aligned_cols=198  Identities=16%  Similarity=0.178  Sum_probs=126.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ..+|+|||++..+|-.++..+..+|+.|+.+.|+.+++.++.+. +....      ...+.+..+|+.|.++....+++ 
T Consensus        33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~------~~~v~~~S~d~~~Y~~v~~~~~~l  106 (331)
T KOG1210|consen   33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ------VEDVSYKSVDVIDYDSVSKVIEEL  106 (331)
T ss_pred             cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc------cceeeEeccccccHHHHHHHHhhh
Confidence            36899999999999999999999999999999999887665442 22111      11245788999998888887764 


Q ss_pred             ------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcC-----CCeEEEEecccccccccCCCCCC
Q 044905           82 ------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAG-----VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        82 ------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~g-----Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .|.+|||||....+.           ..++|+.++.+++.++..+-     ..+|+++||...  .   -...+
T Consensus       107 ~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a--~---~~i~G  181 (331)
T KOG1210|consen  107 RDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA--M---LGIYG  181 (331)
T ss_pred             hhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh--h---cCccc
Confidence                  599999999765422           66789999999988775531     338888887752  1   11123


Q ss_pred             CCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCC--CCCCCCCccceEEecccc--cCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLT--EDFSPESSYNVVVSAEAS--VDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~--~~~~~~~~~~i~~~~~~~--~~~~~~~i~v~DVA~~v~~  215 (427)
                      +..|....++-.-  -++.+-+.+...|+.++..-|+-+  ..|..+.   ... ...+  ...+.+.+..+++|.+++.
T Consensus       182 ysaYs~sK~alrg--La~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En---~tk-P~~t~ii~g~ss~~~~e~~a~~~~~  255 (331)
T KOG1210|consen  182 YSAYSPSKFALRG--LAEALRQELIKYGVHVTLYYPPDTLTPGFEREN---KTK-PEETKIIEGGSSVIKCEEMAKAIVK  255 (331)
T ss_pred             ccccccHHHHHHH--HHHHHHHHHhhcceEEEEEcCCCCCCCcccccc---ccC-chheeeecCCCCCcCHHHHHHHHHh
Confidence            3333333332110  133344445567899999988622  2222211   111 1111  1111246889999999886


Q ss_pred             Hhc
Q 044905          216 VFS  218 (427)
Q Consensus       216 al~  218 (427)
                      -+.
T Consensus       256 ~~~  258 (331)
T KOG1210|consen  256 GMK  258 (331)
T ss_pred             HHh
Confidence            543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.97  E-value=1.2e-08  Score=93.52  Aligned_cols=150  Identities=16%  Similarity=0.178  Sum_probs=94.8

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcc---hH----HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELG---AA----QELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~---~~----~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +++|||++|.+|..+++.|+++| .+|+++.|+..   ..    ..+...+           .++.++.+|++|++.+.+
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g-----------~~v~~~~~Dv~d~~~v~~   70 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG-----------ARVEYVQCDVTDPEAVAA   70 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT------------EEEEEE--TTSHHHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC-----------CceeeeccCccCHHHHHH
Confidence            79999999999999999999998 58999999932   11    2222222           356789999999999999


Q ss_pred             HhcC-------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           78 AIGN-------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        78 al~g-------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                      ++..       ++.|||++|......           .+...+.++.+|.++.....+..||++||.+...+...     
T Consensus        71 ~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~g-----  145 (181)
T PF08659_consen   71 ALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPG-----  145 (181)
T ss_dssp             HHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TT-----
T ss_pred             HHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcc-----
Confidence            8854       578999999765432           23334557888888888888999999988763222211     


Q ss_pred             CCccc-hhhhhccccccHHHHHHHHhcCCCeEEEEeCCCC
Q 044905          140 ISSFF-NNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLT  178 (427)
Q Consensus       140 ~~~~~-~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~  178 (427)
                      ...|. .|.|       .+.+....+..|.+++.|.-|.+
T Consensus       146 q~~YaaAN~~-------lda~a~~~~~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  146 QSAYAAANAF-------LDALARQRRSRGLPAVSINWGAW  178 (181)
T ss_dssp             BHHHHHHHHH-------HHHHHHHHHHTTSEEEEEEE-EB
T ss_pred             hHhHHHHHHH-------HHHHHHHHHhCCCCEEEEEcccc
Confidence            12221 1222       23444444467899888875543

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.94  E-value=4.4e-09  Score=100.09  Aligned_cols=201  Identities=18%  Similarity=0.178  Sum_probs=121.6

Q ss_pred             cCC--cHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--------
Q 044905           11 GAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--------   79 (427)
Q Consensus        11 GAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--------   79 (427)
                      |++  +.||..|++.|+++|++|+++.|+.++.. .+.....++         ...++.+|++|.+++..++        
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY---------GAEVIQCDLSDEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT---------TSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc---------CCceEeecCcchHHHHHHHHHHHhhcC
Confidence            566  99999999999999999999999998632 222221111         1237999999998888764        


Q ss_pred             cCcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           80 GNAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                      ..+|++||+++....    .+           .+++|+.+...+++++...  .-..+|++||.+..     ....... 
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~-----~~~~~~~-  145 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQ-----RPMPGYS-  145 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGT-----SBSTTTH-
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhc-----ccCccch-
Confidence            568999999987654    22           3445555666666666332  12578888877521     1111111 


Q ss_pred             cchhhhhccccccHHHHHH----HHhc-CCCeEEEEeCCCCCCCCCCCcc---ceEE-ecccccCCCCCcccHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQ----KVIE-TDVSYTFIKTSLTEDFSPESSY---NVVV-SAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~----~l~~-~gl~~tilRPG~~~~~~~~~~~---~i~~-~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                          .|+-.+ .+.+.+.+    .+.. .|+++-.|.||++.........   .+.- .....+..  .+...+|||.++
T Consensus       146 ----~y~~sK-aal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~--r~~~~~evA~~v  218 (241)
T PF13561_consen  146 ----AYSASK-AALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG--RLGTPEEVANAV  218 (241)
T ss_dssp             ----HHHHHH-HHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS--SHBEHHHHHHHH
T ss_pred             ----hhHHHH-HHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC--CCcCHHHHHHHH
Confidence                222211 12333333    3346 7999999999977642111000   0000 00111222  247999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.++++... ..|.++.+-++
T Consensus       219 ~fL~s~~a~~itG~~i~vDGG  239 (241)
T PF13561_consen  219 LFLASDAASYITGQVIPVDGG  239 (241)
T ss_dssp             HHHHSGGGTTGTSEEEEESTT
T ss_pred             HHHhCccccCccCCeEEECCC
Confidence            999985433 35777777655

...

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.94  E-value=6.9e-08  Score=95.67  Aligned_cols=219  Identities=11%  Similarity=0.039  Sum_probs=121.5

Q ss_pred             CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh--hhhhhhhhhcc----ceEEEecC--CC
Q 044905            2 KDSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS--YKILSKEELKR----LNAVESNF--DS   71 (427)
Q Consensus         2 ~~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~--~~~~~~~~~~r----l~vv~gDl--~D   71 (427)
                      +..++++||||  |..||..+++.|.++|++|++ .|+...++.+......  ...........    ..++.+|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            34678999999  899999999999999999988 6766554433211100  00000000000    13577787  32


Q ss_pred             H------------------HHHHHHh-------cCcCEEEEccCCCC--CCC-----------CccccHHHHHHHHHHHH
Q 044905           72 A------------------ESIAKAI-------GNAGKVVVTIGPTE--DGP-----------TSEVSTSDAFQVIQAAQ  113 (427)
Q Consensus        72 ~------------------~sl~~al-------~g~d~Vi~~ag~~~--~~~-----------~~~vn~~~~~~ll~Aa~  113 (427)
                      +                  +++..++       ..+|++|||+|...  ..+           .+++|+.+...+++++.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            2                  2444443       35899999996422  122           56778888887777665


Q ss_pred             Hc--CCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----c-CCCeEEEEeCCCCCCCCCCCc
Q 044905          114 LA--GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----E-TDVSYTFIKTSLTEDFSPESS  186 (427)
Q Consensus       114 ~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~-~gl~~tilRPG~~~~~~~~~~  186 (427)
                      ..  .-.++|++||......  .   ....    ..|+.+| .+.+.+.+.+.    . .|+++..|-||++........
T Consensus       166 p~m~~~G~II~isS~a~~~~--~---p~~~----~~Y~asK-aAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~  235 (303)
T PLN02730        166 PIMNPGGASISLTYIASERI--I---PGYG----GGMSSAK-AALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI  235 (303)
T ss_pred             HHHhcCCEEEEEechhhcCC--C---CCCc----hhhHHHH-HHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc
Confidence            43  1268999987652111  0   0111    0122222 22334443333    3 589999999997654321110


Q ss_pred             cceE--E--ecccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          187 YNVV--V--SAEASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       187 ~~i~--~--~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ....  .  .....+..  .+...+|+|.+++.+++.... ..|..+.+-++
T Consensus       236 ~~~~~~~~~~~~~~pl~--r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        236 GFIDDMIEYSYANAPLQ--KELTADEVGNAAAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             cccHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            0000  0  00011111  256889999999999874332 35677766555

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.92  E-value=5.5e-08  Score=90.45  Aligned_cols=198  Identities=15%  Similarity=0.166  Sum_probs=119.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CC-eEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GF-SVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~-~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |.+++|+||||+..||--|+++|++. |. .+++..|+++++ .++......        .+|+.+++.|+++.+++.++
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--------d~rvHii~Ldvt~deS~~~~   72 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--------DSRVHIIQLDVTCDESIDNF   72 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--------CCceEEEEEecccHHHHHHH
Confidence            67888999999999999999999985 54 566777888874 333332222        57899999999999998887


Q ss_pred             hc---------CcCEEEEccCCCCC-----CC-------CccccHHHHHHHHHHH----HHcCC-----------CeEEE
Q 044905           79 IG---------NAGKVVVTIGPTED-----GP-------TSEVSTSDAFQVIQAA----QLAGV-----------GHVAI  122 (427)
Q Consensus        79 l~---------g~d~Vi~~ag~~~~-----~~-------~~~vn~~~~~~ll~Aa----~~~gV-----------k~~V~  122 (427)
                      ..         |++.+|+++|....     .+       .+++|..+...+.+++    +++.-           .-+|+
T Consensus        73 ~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIin  152 (249)
T KOG1611|consen   73 VQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIIN  152 (249)
T ss_pred             HHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEE
Confidence            64         57899999996542     11       5677777776665543    22222           25787


Q ss_pred             EecccccccccCCCCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccC
Q 044905          123 IYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVD  198 (427)
Q Consensus       123 vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~  198 (427)
                      +||.+...+       +........|.-++ .+.-.+.    -.+...++-++.+.||+......+              
T Consensus       153 isS~~~s~~-------~~~~~~~~AYrmSK-aAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg--------------  210 (249)
T KOG1611|consen  153 ISSSAGSIG-------GFRPGGLSAYRMSK-AALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG--------------  210 (249)
T ss_pred             eeccccccC-------CCCCcchhhhHhhH-HHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC--------------
Confidence            887763211       11111111222111 1111111    222345677888889965432110              


Q ss_pred             CCCCcccHHHHHHHHHHHhcCcc-cccCcEEEE
Q 044905          199 ANDYKVAKSQIASLVADVFSNTA-VAENKVVKV  230 (427)
Q Consensus       199 ~~~~~i~v~DVA~~v~~al~~~~-~~~g~~~nI  230 (427)
                       ....+++++-+.-++..+.+.. ...|..||-
T Consensus       211 -~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~  242 (249)
T KOG1611|consen  211 -KKAALTVEESTSKLLASINKLKNEHNGGFFNR  242 (249)
T ss_pred             -CCcccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence             1135667776666666665432 335565554

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.91  E-value=4.7e-09  Score=97.45  Aligned_cols=187  Identities=11%  Similarity=0.016  Sum_probs=125.1

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEE
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKV   85 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~V   85 (427)
                      ..++.|+.||.|++|++..+..|+.|..+.|+..+  .+....          ..++++..+|....+-+...+.+...+
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k--~~l~sw----------~~~vswh~gnsfssn~~k~~l~g~t~v  121 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK--QTLSSW----------PTYVSWHRGNSFSSNPNKLKLSGPTFV  121 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc--chhhCC----------CcccchhhccccccCcchhhhcCCccc
Confidence            46899999999999999999999999999999753  222221          234457778877666667778899999


Q ss_pred             EEccCCCCCCC-CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh
Q 044905           86 VVTIGPTEDGP-TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI  164 (427)
Q Consensus        86 i~~ag~~~~~~-~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~  164 (427)
                      +.++|...+.. +..+|-...++-+.++.++||++|+|||.-..          +.+++...-|...+ ..+|.-+.  .
T Consensus       122 ~e~~ggfgn~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~----------~~~~~i~rGY~~gK-R~AE~Ell--~  188 (283)
T KOG4288|consen  122 YEMMGGFGNIILMDRINGTANINAVKAAAKAGVPRFVYISAHDF----------GLPPLIPRGYIEGK-REAEAELL--K  188 (283)
T ss_pred             HHHhcCccchHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhc----------CCCCccchhhhccc-hHHHHHHH--H
Confidence            99998776543 45677666777899999999999999983321          11222222222222 12443222  2


Q ss_pred             cCCCeEEEEeCCCCCCCCCCCccceEE-------------ec----------ccccCCCCCcccHHHHHHHHHHHhcCcc
Q 044905          165 ETDVSYTFIKTSLTEDFSPESSYNVVV-------------SA----------EASVDANDYKVAKSQIASLVADVFSNTA  221 (427)
Q Consensus       165 ~~gl~~tilRPG~~~~~~~~~~~~i~~-------------~~----------~~~~~~~~~~i~v~DVA~~v~~al~~~~  221 (427)
                      ..+++-+|||||||.+...-  .++..             ..          .+....  +.+.+++||.+++.++.+|+
T Consensus       189 ~~~~rgiilRPGFiyg~R~v--~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~--ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  189 KFRFRGIILRPGFIYGTRNV--GGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLA--PPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             hcCCCceeeccceeeccccc--CcccccHHhhhhhHHHHHHhhhchhhcCcccccccC--CCcCHHHHHHHHHHhccCCC
Confidence            46688999999988765221  11100             00          011112  57899999999999998874

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.91  E-value=1.5e-08  Score=92.62  Aligned_cols=100  Identities=14%  Similarity=0.137  Sum_probs=76.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN---   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g---   81 (427)
                      |+++||||||++|. +++.|+++||+|++++|++.....+......        ..++.++.+|++|.+++.+++++   
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--------~~~i~~~~~Dv~d~~sv~~~i~~~l~   71 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTT--------PESITPLPLDYHDDDALKLAIKSTIE   71 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--------CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999998876 9999999999999999987765554331111        23456788999999999888764   


Q ss_pred             ----cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC----eEEEEe
Q 044905           82 ----AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG----HVAIIY  124 (427)
Q Consensus        82 ----~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk----~~V~vS  124 (427)
                          .|.+|+.+           +..+..++..+|++.|++    +|+++-
T Consensus        72 ~~g~id~lv~~v-----------h~~~~~~~~~~~~~~gv~~~~~~~~h~~  111 (177)
T PRK08309         72 KNGPFDLAVAWI-----------HSSAKDALSVVCRELDGSSETYRLFHVL  111 (177)
T ss_pred             HcCCCeEEEEec-----------cccchhhHHHHHHHHccCCCCceEEEEe
Confidence                45555433           333678899999999999    888874

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=98.89  E-value=3.1e-08  Score=94.46  Aligned_cols=191  Identities=10%  Similarity=0.010  Sum_probs=116.0

Q ss_pred             HHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----CcCEEEEccCCCCCC
Q 044905           20 IAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----NAGKVVVTIGPTEDG   95 (427)
Q Consensus        20 lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----g~d~Vi~~ag~~~~~   95 (427)
                      +++.|+++|++|++++|+..+.. +    .             .++.+|++|.+++.++++    ++|+|||++|.....
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-~----~-------------~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~   62 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-L----D-------------GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTA   62 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-h----h-------------HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCC
Confidence            47889999999999999876532 1    1             267899999999998876    589999999975432


Q ss_pred             C---CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCC-C------------------CCCCccchhhhhcc
Q 044905           96 P---TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNV-L------------------DGISSFFNNLFSRN  151 (427)
Q Consensus        96 ~---~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~-~------------------~~~~~~~~~~~~k~  151 (427)
                      .   .+++|+.++..+++++...  .-.+||++||.+.+....... .                  .+.+.  ...|+.+
T Consensus        63 ~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~s  140 (241)
T PRK12428         63 PVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVAL--ATGYQLS  140 (241)
T ss_pred             CHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCc--ccHHHHH
Confidence            2   5788999999999988653  236899999887543111000 0                  01111  1223333


Q ss_pred             ccccHHHHHHH-----HhcCCCeEEEEeCCCCCCCCCCCccceE----EecccccCCCCCcccHHHHHHHHHHHhcCccc
Q 044905          152 QPLTVPEFLQK-----VIETDVSYTFIKTSLTEDFSPESSYNVV----VSAEASVDANDYKVAKSQIASLVADVFSNTAV  222 (427)
Q Consensus       152 ~~l~~E~~l~~-----l~~~gl~~tilRPG~~~~~~~~~~~~i~----~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~  222 (427)
                      | .+.+.+.+.     +...|++++.|+||.+............    ......+..  ...+.+|+|++++.+++....
T Consensus       141 K-~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~pe~va~~~~~l~s~~~~  217 (241)
T PRK12428        141 K-EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMG--RPATADEQAAVLVFLCSDAAR  217 (241)
T ss_pred             H-HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccC--CCCCHHHHHHHHHHHcChhhc
Confidence            2 223333332     3356899999999955432111100000    000001111  246899999999998864322


Q ss_pred             -ccCcEEEEecC
Q 044905          223 -AENKVVKVFTD  233 (427)
Q Consensus       223 -~~g~~~nI~~~  233 (427)
                       ..|..+.+.++
T Consensus       218 ~~~G~~i~vdgg  229 (241)
T PRK12428        218 WINGVNLPVDGG  229 (241)
T ss_pred             CccCcEEEecCc
Confidence             34666666554

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.89  E-value=9.3e-08  Score=91.07  Aligned_cols=160  Identities=18%  Similarity=0.183  Sum_probs=100.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~a   78 (427)
                      +.+++|+||||++.||..+++.|+++|+.|+++.|+...  .+.+......     ... ..+.....|+++ .+++..+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~Dvs~~~~~v~~~   76 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKE-----AGG-GRAAAVAADVSDDEESVEAL   76 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHh-----cCC-CcEEEEEecCCCCHHHHHHH
Confidence            567899999999999999999999999999988888654  2333222110     000 234467799998 7777665


Q ss_pred             hc-------CcCEEEEccCCCCCC-C-----------CccccHHHHHHHHHHHHHcCCC--eEEEEecccccccccCCCC
Q 044905           79 IG-------NAGKVVVTIGPTEDG-P-----------TSEVSTSDAFQVIQAAQLAGVG--HVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~~-~-----------~~~vn~~~~~~ll~Aa~~~gVk--~~V~vSSs~v~~~~~~~~~  137 (427)
                      +.       ++|++|+++|..... +           .+.+|+.+...+.+++... .+  +||.+||.... .  ....
T Consensus        77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~~Iv~isS~~~~-~--~~~~  152 (251)
T COG1028          77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL-MKKQRIVNISSVAGL-G--GPPG  152 (251)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh-hhhCeEEEECCchhc-C--CCCC
Confidence            53       489999999976431 1           5567777777777733321 22  88888877621 1  1100


Q ss_pred             CCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCC
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTE  179 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~  179 (427)
                        ...|....++      ...+.+    .+...|+.+..+.||++.
T Consensus       153 --~~~Y~~sK~a------l~~~~~~l~~e~~~~gi~v~~v~PG~~~  190 (251)
T COG1028         153 --QAAYAASKAA------LIGLTKALALELAPRGIRVNAVAPGYID  190 (251)
T ss_pred             --cchHHHHHHH------HHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence              1223222211      222222    223568999999999544

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.88  E-value=2.2e-08  Score=93.26  Aligned_cols=225  Identities=11%  Similarity=0.096  Sum_probs=139.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCe-EEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFS-VRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~-V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +.++|||||+-|.+|..++..|..+ |-+ |+.-+ +.++  +.....|+              ++..|+.|...|.+..
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~~V~~~GP--------------yIy~DILD~K~L~eIV  106 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--ANVTDVGP--------------YIYLDILDQKSLEEIV  106 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--hhhcccCC--------------chhhhhhccccHHHhh
Confidence            5679999999999999999988876 644 44322 2222  22223232              6778999988888877


Q ss_pred             c--CcCEEEEccCC------CCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCcc----chhh
Q 044905           80 G--NAGKVVVTIGP------TEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSF----FNNL  147 (427)
Q Consensus        80 ~--g~d~Vi~~ag~------~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~----~~~~  147 (427)
                      -  .+|.+||..+.      ....-...+|..|.-|+++.|.++..+  +|+-|+--..|.+++. .+.+..    ....
T Consensus       107 Vn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~--iFVPSTIGAFGPtSPR-NPTPdltIQRPRTI  183 (366)
T KOG2774|consen  107 VNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLK--VFVPSTIGAFGPTSPR-NPTPDLTIQRPRTI  183 (366)
T ss_pred             cccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCee--EeecccccccCCCCCC-CCCCCeeeecCcee
Confidence            4  58999994432      111225688999999999999999876  4445443223333322 121111    1123


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEe-CCCCCCCCCCC---ccce------E----EecccccCCCCCcccHHHHHHH
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIK-TSLTEDFSPES---SYNV------V----VSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilR-PG~~~~~~~~~---~~~i------~----~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      |+-++ ..+|-+-+.+. ..|+++-.+| ||.+.+..++.   .+.+      .    ......++..++.++..|+-+.
T Consensus       184 YGVSK-VHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~  262 (366)
T KOG2774|consen  184 YGVSK-VHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMAS  262 (366)
T ss_pred             echhH-HHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHH
Confidence            44333 44555545543 5688888898 67665433321   0110      0    1112234555678999999999


Q ss_pred             HHHHhcCcc-cccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          213 VADVFSNTA-VAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       213 v~~al~~~~-~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++..+..+. ....++||+.+-.    .+-.|+++.+.+.
T Consensus       263 ~~~~~~a~~~~lkrr~ynvt~~s----ftpee~~~~~~~~  298 (366)
T KOG2774|consen  263 VIQLLAADSQSLKRRTYNVTGFS----FTPEEIADAIRRV  298 (366)
T ss_pred             HHHHHhCCHHHhhhheeeeceec----cCHHHHHHHHHhh
Confidence            988876543 2356899999884    5558888888764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.86  E-value=1.8e-08  Score=92.63  Aligned_cols=153  Identities=16%  Similarity=0.198  Sum_probs=105.9

Q ss_pred             CCCEEEEEcC-CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGA-TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGA-TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+|||+ +|.||.+|++.|.+.||.|++..|+.+....|..   +         .+|.....|+++++.+.+..+ 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~---~---------~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAI---Q---------FGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHH---h---------hCCeeEEeccCChHHHHHHHHH
Confidence            4568999985 5899999999999999999999999987766642   1         233488999999998887654 


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             ..|+++++||.....|           .+++|+.|.+++.++..+.   .-..||++.|...+.         
T Consensus        74 vr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~v---------  144 (289)
T KOG1209|consen   74 VRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVV---------  144 (289)
T ss_pred             HhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEe---------
Confidence                   3699999999765433           6788888999988887653   234688887766321         


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLT  178 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~  178 (427)
                       +..+...|..++ .+.-.+-+.++    ..|++++.+-||..
T Consensus       145 -pfpf~~iYsAsK-AAihay~~tLrlEl~PFgv~Vin~itGGv  185 (289)
T KOG1209|consen  145 -PFPFGSIYSASK-AAIHAYARTLRLELKPFGVRVINAITGGV  185 (289)
T ss_pred             -ccchhhhhhHHH-HHHHHhhhhcEEeeeccccEEEEecccce
Confidence             112223333332 11222223333    34788888888743

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.78  E-value=2e-07  Score=87.58  Aligned_cols=220  Identities=10%  Similarity=0.122  Sum_probs=130.5

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      ..||||-||.=|+.|++.||..||+|.++.|+.+.  ...+..+...+..   -...+.....||++|..+|.+.+.-  
T Consensus        30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~---h~~~~mkLHYgDmTDss~L~k~I~~ik  106 (376)
T KOG1372|consen   30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHT---HNGASMKLHYGDMTDSSCLIKLISTIK  106 (376)
T ss_pred             EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchh---cccceeEEeeccccchHHHHHHHhccC
Confidence            46999999999999999999999999999998774  2333333222110   0124566889999999999998864  


Q ss_pred             cCEEEEccCCCCC-------CCCccccHHHHHHHHHHHHHcCCC---eEEEEecccccccccCCCCCCCCc-cchhhhhc
Q 044905           82 AGKVVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLAGVG---HVAIIYDGNTTAASTYNVLDGISS-FFNNLFSR  150 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~gVk---~~V~vSSs~v~~~~~~~~~~~~~~-~~~~~~~k  150 (427)
                      .+-|+|+++-.-.       ....+++..|+++|++|.+.++..   +|...|++-.|+.....+.....+ ++.+.|+-
T Consensus       107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~  186 (376)
T KOG1372|consen  107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAA  186 (376)
T ss_pred             chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHH
Confidence            3566666553211       224577778999999999988632   465567777766443333223333 33334432


Q ss_pred             cccccHHHHHHHHhcCCCeEEEE--e--------CCCCCCCCCCC-------------ccceEEe-----cccccCCCCC
Q 044905          151 NQPLTVPEFLQKVIETDVSYTFI--K--------TSLTEDFSPES-------------SYNVVVS-----AEASVDANDY  202 (427)
Q Consensus       151 ~~~l~~E~~l~~l~~~gl~~til--R--------PG~~~~~~~~~-------------~~~i~~~-----~~~~~~~~~~  202 (427)
                      .+      +..       -|+++  |        .|..-|...+.             ...+.+.     ..++.....+
T Consensus       187 aK------my~-------~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  187 AK------MYG-------YWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             hh------hhh-------eEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence            11      111       12222  1        12111111110             0011110     0122222236


Q ss_pred             cccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHH
Q 044905          203 KVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSA  247 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~  247 (427)
                      |=|..|..+++..+|++.   ...-|-|+.++   ..+++|++..
T Consensus       254 WGhA~dYVEAMW~mLQ~d---~PdDfViATge---~hsVrEF~~~  292 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQD---SPDDFVIATGE---QHSVREFCNL  292 (376)
T ss_pred             cchhHHHHHHHHHHHhcC---CCCceEEecCC---cccHHHHHHH
Confidence            889999999999898753   24556788887   5666666654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.76  E-value=5.4e-08  Score=98.54  Aligned_cols=95  Identities=19%  Similarity=0.261  Sum_probs=81.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ||+|+|+|| |++|+.++..|+++| ++|++.+|+.+++..+....          ..+++....|..|.+++.+++++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----------~~~v~~~~vD~~d~~al~~li~~~   69 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----------GGKVEALQVDAADVDALVALIKDF   69 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----------cccceeEEecccChHHHHHHHhcC
Confidence            679999999 999999999999999 99999999998877765432          125679999999999999999999


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      |+||+++.+.           ...+++++|.++|+. +|
T Consensus        70 d~VIn~~p~~-----------~~~~i~ka~i~~gv~-yv   96 (389)
T COG1748          70 DLVINAAPPF-----------VDLTILKACIKTGVD-YV   96 (389)
T ss_pred             CEEEEeCCch-----------hhHHHHHHHHHhCCC-EE
Confidence            9999999864           235799999999984 44

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.76  E-value=2.2e-06  Score=83.61  Aligned_cols=216  Identities=14%  Similarity=0.084  Sum_probs=125.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH---
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA---   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a---   78 (427)
                      ...+.++|||++..||++++.+|.+.|.+|+...|+.+............    .....++..+.+|+++.+...++   
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGL----GYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999988654443221100    00124566899999987655444   


Q ss_pred             -----hcCcCEEEEccCCCCCC-C-----------CccccHH-HHHHHHHHHHH----cCCCeEEEEecccccccccCCC
Q 044905           79 -----IGNAGKVVVTIGPTEDG-P-----------TSEVSTS-DAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        79 -----l~g~d~Vi~~ag~~~~~-~-----------~~~vn~~-~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                           +...|++|+++|..... +           .+.+|+. ....+..++..    .+-..++++||.+....   .+
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~---~~  158 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGP---GP  158 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccC---CC
Confidence                 34589999999976542 1           4566666 35555555533    35667887776652111   10


Q ss_pred             CCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCc-c-----ceEE---ecccccCCCCCc
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESS-Y-----NVVV---SAEASVDANDYK  203 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~-~-----~i~~---~~~~~~~~~~~~  203 (427)
                      ..+ ..|..     .+ -+.+.+.+    .+...|+++-.|-||+......... .     ....   .....+..  ..
T Consensus       159 ~~~-~~Y~~-----sK-~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~g--r~  229 (270)
T KOG0725|consen  159 GSG-VAYGV-----SK-AALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLG--RV  229 (270)
T ss_pred             CCc-ccchh-----HH-HHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccC--Cc
Confidence            001 11221     11 11333333    3346789999999984433211000 0     0000   00000111  25


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ...+|||..++.+...... ..|..+.+.++
T Consensus       230 g~~~eva~~~~fla~~~asyitG~~i~vdgG  260 (270)
T KOG0725|consen  230 GTPEEVAEAAAFLASDDASYITGQTIIVDGG  260 (270)
T ss_pred             cCHHHHHHhHHhhcCcccccccCCEEEEeCC
Confidence            6789999999877664211 34666666555

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=98.75  E-value=1.3e-07  Score=86.80  Aligned_cols=113  Identities=11%  Similarity=0.125  Sum_probs=84.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      -.-+||||||+..||..+++.|++.|-+|++..|+..++.+.....+.           +..+.+|+.|.+++.+.++  
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~-----------~~t~v~Dv~d~~~~~~lvewL   72 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE-----------IHTEVCDVADRDSRRELVEWL   72 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc-----------hheeeecccchhhHHHHHHHH
Confidence            345899999999999999999999999999999999887766554333           2468899999887776654  


Q ss_pred             -----CcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHHHHc----CCCeEEEEecc
Q 044905           81 -----NAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDG  126 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs  126 (427)
                           ..+++|+|||....-.             ...+|+.+.+++..+...+    .-..+|-|||.
T Consensus        73 kk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSG  140 (245)
T COG3967          73 KKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSG  140 (245)
T ss_pred             HhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccc
Confidence                 4799999999765311             4456777777776666443    33356767654

>PRK06720 hypothetical protein; Provisional

Probab=98.73  E-value=4.5e-07  Score=82.25  Aligned_cols=84  Identities=13%  Similarity=0.065  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +.+.++||||+|+||..++..|++.|++|+++.|+.............       ...+..++.+|++|.+++.+++   
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~v~~~v~~~   87 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN-------LGGEALFVSYDMEKQGDWQRVISIT   87 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987654332211101       0123347899999988877654   


Q ss_pred             ----cCcCEEEEccCCCC
Q 044905           80 ----GNAGKVVVTIGPTE   93 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~   93 (427)
                          .++|++||++|...
T Consensus        88 ~~~~G~iDilVnnAG~~~  105 (169)
T PRK06720         88 LNAFSRIDMLFQNAGLYK  105 (169)
T ss_pred             HHHcCCCCEEEECCCcCC
Confidence                46899999999655

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.64  E-value=2.6e-06  Score=84.29  Aligned_cols=218  Identities=11%  Similarity=0.060  Sum_probs=114.1

Q ss_pred             CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCc---------chHH--HH--HHHHh-----hhhhhhhhhhccc
Q 044905            3 DSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPEL---------GAAQ--EL--ARLAA-----SYKILSKEELKRL   62 (427)
Q Consensus         3 ~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~---------~~~~--~l--~~~~~-----~~~~~~~~~~~rl   62 (427)
                      +.++++||||+  ..||+++++.|.++|++|++..|.+         +...  ..  ...+.     ....+. .+....
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~d~~~~   85 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD-ASFDTP   85 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhh-hhcCCC
Confidence            46789999994  8999999999999999999876542         0000  00  00000     000000 011122


Q ss_pred             eEEEecCCCH--------HHHHHH-------hcCcCEEEEccCCCC--CCC-----------CccccHHHHHHHHHHHHH
Q 044905           63 NAVESNFDSA--------ESIAKA-------IGNAGKVVVTIGPTE--DGP-----------TSEVSTSDAFQVIQAAQL  114 (427)
Q Consensus        63 ~vv~gDl~D~--------~sl~~a-------l~g~d~Vi~~ag~~~--~~~-----------~~~vn~~~~~~ll~Aa~~  114 (427)
                      +.+..|+++.        +++.++       +..+|++|||+|...  ..+           .+++|+.+..++++++..
T Consensus        86 ~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p  165 (299)
T PRK06300         86 EDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGP  165 (299)
T ss_pred             EEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            3344444331        123332       346899999997532  111           457777888888877754


Q ss_pred             c--CCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hc-CCCeEEEEeCCCCCCCCCCCcc
Q 044905          115 A--GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IE-TDVSYTFIKTSLTEDFSPESSY  187 (427)
Q Consensus       115 ~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~-~gl~~tilRPG~~~~~~~~~~~  187 (427)
                      .  .-.++|.++|..-  ....   ....    ..|.-+| .+.+.+.+.+    .. .|+++..|.||++.........
T Consensus       166 ~m~~~G~ii~iss~~~--~~~~---p~~~----~~Y~asK-aAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~  235 (299)
T PRK06300        166 IMNPGGSTISLTYLAS--MRAV---PGYG----GGMSSAK-AALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG  235 (299)
T ss_pred             HhhcCCeEEEEeehhh--cCcC---CCcc----HHHHHHH-HHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc
Confidence            3  1246888876541  1111   0111    0122221 1233333333    23 4899999999966442211000


Q ss_pred             ce--EEec--ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          188 NV--VVSA--EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       188 ~i--~~~~--~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ..  ....  ...+..  .....+|||.+++++++.... ..|..+.+.++
T Consensus       236 ~~~~~~~~~~~~~p~~--r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        236 FIERMVDYYQDWAPLP--EPMEAEQVGAAAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             ccHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            00  0000  001111  256889999999998874322 35677777655

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.60  E-value=6.3e-07  Score=109.17  Aligned_cols=124  Identities=10%  Similarity=0.109  Sum_probs=88.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcch-----------HHHHHH--------HHhh-------------
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGA-----------AQELAR--------LAAS-------------   50 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~-----------~~~l~~--------~~~~-------------   50 (427)
                      .++++||||+|.||..++++|+++ |++|+++.|++..           ...+..        .+..             
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence            468999999999999999999998 6999999998310           000100        0000             


Q ss_pred             ---hh---hhhh-h-hhccceEEEecCCCHHHHHHHhc------CcCEEEEccCCCCCCC-----------CccccHHHH
Q 044905           51 ---YK---ILSK-E-ELKRLNAVESNFDSAESIAKAIG------NAGKVVVTIGPTEDGP-----------TSEVSTSDA  105 (427)
Q Consensus        51 ---~~---~~~~-~-~~~rl~vv~gDl~D~~sl~~al~------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~  105 (427)
                         ..   .+.. . ...++.++.+|++|.+++.+++.      ++|.|||++|......           .+.+|+.|.
T Consensus      2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813      2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred             chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence               00   0000 0 01356688999999998887774      4799999999754321           678899999


Q ss_pred             HHHHHHHHHcCCCeEEEEeccc
Q 044905          106 FQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus       106 ~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      .++++++.....++||++||..
T Consensus      2157 ~~Ll~al~~~~~~~IV~~SSva 2178 (2582)
T TIGR02813      2157 LSLLAALNAENIKLLALFSSAA 2178 (2582)
T ss_pred             HHHHHHHHHhCCCeEEEEechh
Confidence            9999999887778899998876

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.58  E-value=3.2e-07  Score=91.48  Aligned_cols=113  Identities=16%  Similarity=0.130  Sum_probs=84.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      .|+||+|+|++|.+|+.++..|+.++  ++++.++++....  -++.....             +....+++|+.++.++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~-------------~~~v~~~td~~~~~~~   73 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT-------------PAKVTGYADGELWEKA   73 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc-------------CceEEEecCCCchHHH
Confidence            46799999999999999999998666  6899999843221  12221111             1344566665566788


Q ss_pred             hcCcCEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcCCCeEEEEecccc
Q 044905           79 IGNAGKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNT  128 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v  128 (427)
                      ++++|+||+++|.... +    ..+..|...+.++++++++++++++|+++|-.+
T Consensus        74 l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv  128 (321)
T PTZ00325         74 LRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV  128 (321)
T ss_pred             hCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            9999999999997543 1    135677778999999999999999999987765

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.49  E-value=6.1e-07  Score=91.75  Aligned_cols=93  Identities=32%  Similarity=0.411  Sum_probs=69.9

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCC-C-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            7 VFVAGATGQAGVRIAQTLLREG-F-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G-~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+|+ |++|+.+++.|++++ + +|++.+|+..+++.+....         ...++..+..|+.|.++|.++++++|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---------~~~~~~~~~~d~~~~~~l~~~~~~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---------LGDRVEAVQVDVNDPESLAELLRGCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----------TTTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---------cccceeEEEEecCCHHHHHHHHhcCCE
Confidence            799999 999999999999987 5 8999999998876664321         135677999999999999999999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      ||+|+|+.           ....++++|.++|+ |+|
T Consensus        71 Vin~~gp~-----------~~~~v~~~~i~~g~-~yv   95 (386)
T PF03435_consen   71 VINCAGPF-----------FGEPVARACIEAGV-HYV   95 (386)
T ss_dssp             EEE-SSGG-----------GHHHHHHHHHHHT--EEE
T ss_pred             EEECCccc-----------hhHHHHHHHHHhCC-Cee
Confidence            99999874           12457777777776 444

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.42  E-value=1.1e-06  Score=84.96  Aligned_cols=97  Identities=15%  Similarity=0.132  Sum_probs=76.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      |+|||+||||. |+.|++.|.++||+|++.+++....+.+...+..             .+..+..|.+++.+.++  ++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~-------------~v~~g~l~~~~l~~~l~~~~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQAL-------------TVHTGALDPQELREFLKRHSI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCc-------------eEEECCCCHHHHHHHHHhcCC
Confidence            68999999999 9999999999999999999998755544433322             45566678888988886  48


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||+++.|.      ...  .+.|+.++|++.|++.+-|-
T Consensus        67 ~~VIDAtHPf------A~~--is~~a~~a~~~~~ipylR~e   99 (256)
T TIGR00715        67 DILVDATHPF------AAQ--ITTNATAVCKELGIPYVRFE   99 (256)
T ss_pred             CEEEEcCCHH------HHH--HHHHHHHHHHHhCCcEEEEE
Confidence            9999988763      222  55889999999999877653

This enzyme was found to be a monomer by gel filtration.

>PLN00106 malate dehydrogenase

Probab=98.37  E-value=1.9e-06  Score=86.06  Aligned_cols=111  Identities=14%  Similarity=0.117  Sum_probs=81.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +.||+|+|++|++|+.++..|+.++  .+++.++++....  -+|.....             .....++.+.+++..++
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~-------------~~~i~~~~~~~d~~~~l   84 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINT-------------PAQVRGFLGDDQLGDAL   84 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCc-------------CceEEEEeCCCCHHHHc
Confidence            4689999999999999999999877  4899999876211  12221111             12233444444577899


Q ss_pred             cCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           80 GNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      .++|+|||++|.... +.    ....|...+.++++++.+++...+++++|--
T Consensus        85 ~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNP  137 (323)
T PLN00106         85 KGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNP  137 (323)
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence            999999999997543 21    4567888899999999999999888877543

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.33  E-value=4.1e-06  Score=77.41  Aligned_cols=81  Identities=27%  Similarity=0.171  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++++|+||||.+|+.+++.|++.|++|+++.|+.++++.+......        .....+..+|+.|.+.+.+++.++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~--------~~~~~~~~~~~~~~~~~~~~~~~~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRA--------RFGEGVGAVETSDDAARAAAIKGA   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--------hcCCcEEEeeCCCHHHHHHHHhcC
Confidence            357899999999999999999999999999999998776555432110        012246677889999999999999


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||++...
T Consensus        99 diVi~at~~  107 (194)
T cd01078          99 DVVFAAGAA  107 (194)
T ss_pred             CEEEECCCC
Confidence            999886653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.30  E-value=1e-05  Score=78.98  Aligned_cols=115  Identities=18%  Similarity=0.186  Sum_probs=79.8

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH----HHHHhcC-
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAES----IAKAIGN-   81 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s----l~~al~g-   81 (427)
                      .+|||||..||...+++|.++|++|+.++|+.+++..+.....+.     . .-.+.++..|+++.+.    +.+.+.+ 
T Consensus        52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~-----~-~vev~~i~~Dft~~~~~ye~i~~~l~~~  125 (312)
T KOG1014|consen   52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK-----Y-KVEVRIIAIDFTKGDEVYEKLLEKLAGL  125 (312)
T ss_pred             EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH-----h-CcEEEEEEEecCCCchhHHHHHHHhcCC
Confidence            589999999999999999999999999999999887665432220     0 1234478889987654    5555655 


Q ss_pred             -cCEEEEccCCCCCCC-------------CccccHHHHHHHHHH----HHHcCCCeEEEEeccc
Q 044905           82 -AGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGN  127 (427)
Q Consensus        82 -~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~  127 (427)
                       +.++|+|+|.....|             ...+|..++..+.+.    +...+-.-+|.+||++
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~a  189 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFA  189 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccc
Confidence             568999999766323             334555555444433    3334455688888775

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.29  E-value=2.4e-06  Score=84.20  Aligned_cols=103  Identities=21%  Similarity=0.249  Sum_probs=77.5

Q ss_pred             EEEEEcCCcHHHHHHHHHHHH----CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLR----EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~----~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      -++|.|||||.|..++++++.    .|...-+-.|+..++++........   .+.+.+.--++.+|..|+++|.+....
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k---~~~~ls~~~i~i~D~~n~~Sl~emak~   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEK---TGTDLSSSVILIADSANEASLDEMAKQ   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhc---cCCCcccceEEEecCCCHHHHHHHHhh
Confidence            479999999999999999999    6788888899999886554332211   111233333899999999999999999


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV  120 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~  120 (427)
                      +.+|++|+||...-         -..++.||.++|..|+
T Consensus        84 ~~vivN~vGPyR~h---------GE~VVkacienG~~~v  113 (423)
T KOG2733|consen   84 ARVIVNCVGPYRFH---------GEPVVKACIENGTHHV  113 (423)
T ss_pred             hEEEEeccccceec---------CcHHHHHHHHcCCcee
Confidence            99999999986421         1447777777776443

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.28  E-value=5.2e-06  Score=77.53  Aligned_cols=210  Identities=13%  Similarity=0.138  Sum_probs=125.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH---HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE---LARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~---l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      .+++++||+.|.||..++.+|+.+|..+.++.-+.+..+.   |....+.         ..+.++++|+++..++.++|+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~---------~~v~F~~~DVt~~~~~~~~f~   75 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPS---------VSVIFIKCDVTNRGDLEAAFD   75 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCC---------ceEEEEEeccccHHHHHHHHH
Confidence            4689999999999999999999999988888876665433   3332222         244589999999888888775


Q ss_pred             -------CcCEEEEccCCCCCCC---CccccHHHHH----HHHHHHHHc--CCCe-EEEEecccccccccCCCCCCCCcc
Q 044905           81 -------NAGKVVVTIGPTEDGP---TSEVSTSDAF----QVIQAAQLA--GVGH-VAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~---~~~vn~~~~~----~ll~Aa~~~--gVk~-~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                             ..|++|+.+|......   ...+|+.|..    ..+.++.+.  |-.- +|-+||..  +-   .+..-++.|
T Consensus        76 ki~~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~--GL---~P~p~~pVY  150 (261)
T KOG4169|consen   76 KILATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA--GL---DPMPVFPVY  150 (261)
T ss_pred             HHHHHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc--cc---Cccccchhh
Confidence                   4799999999865322   4455555443    445555443  2333 44445443  21   111223333


Q ss_pred             chh-----hhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCc-c-ceEEecccc---cCCCCCcccHHHHHHHH
Q 044905          144 FNN-----LFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESS-Y-NVVVSAEAS---VDANDYKVAKSQIASLV  213 (427)
Q Consensus       144 ~~~-----~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~-~-~i~~~~~~~---~~~~~~~i~v~DVA~~v  213 (427)
                      ...     .|.++.  +-   +..+.++|+++..+.||++....-... . +..+.....   .....+.-+..+++..+
T Consensus       151 ~AsKaGVvgFTRSl--a~---~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~  225 (261)
T KOG4169|consen  151 AASKAGVVGFTRSL--AD---LAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINI  225 (261)
T ss_pred             hhcccceeeeehhh--hh---hhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHH
Confidence            322     233331  11   234457999999999997643211100 0 111111110   00111345678899999


Q ss_pred             HHHhcCcccccCcEEEEecCC
Q 044905          214 ADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~  234 (427)
                      +.+++.+  -.|.++-+..+.
T Consensus       226 v~aiE~~--~NGaiw~v~~g~  244 (261)
T KOG4169|consen  226 VNAIEYP--KNGAIWKVDSGS  244 (261)
T ss_pred             HHHHhhc--cCCcEEEEecCc
Confidence            9999864  256677776664

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.25  E-value=2.9e-06  Score=84.97  Aligned_cols=110  Identities=7%  Similarity=-0.017  Sum_probs=70.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-------FSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAES   74 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-------~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s   74 (427)
                      +.+|+||||+|++|++++..|+..+       ++|+++++++..  +...   ..+  +.+..     ....+|+.+..+
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~---~~D--l~d~~-----~~~~~~~~~~~~   71 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGV---VME--LQDCA-----FPLLKSVVATTD   71 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccce---eee--hhhcc-----ccccCCceecCC
Confidence            5689999999999999999999855       589999996531  2111   000  00000     011234444566


Q ss_pred             HHHHhcCcCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcC-CCeEEEE
Q 044905           75 IAKAIGNAGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAG-VGHVAII  123 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~g-Vk~~V~v  123 (427)
                      +.++++++|+|||++|..... .    ....|..-...+...+.++. -..++++
T Consensus        72 ~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiiv  126 (325)
T cd01336          72 PEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLV  126 (325)
T ss_pred             HHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            778899999999999975431 1    34566666677777777774 3444433

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.18  E-value=9.8e-06  Score=72.70  Aligned_cols=204  Identities=15%  Similarity=0.171  Sum_probs=121.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      ...|++||+.-.||+.++..|.+.|.+|+++.|++..+..|....+.          -+..+.+|+.+-+.+.+.+..  
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~----------~I~Pi~~Dls~wea~~~~l~~v~   76 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS----------LIIPIVGDLSAWEALFKLLVPVF   76 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc----------ceeeeEecccHHHHHHHhhcccC
Confidence            45799999988999999999999999999999999877666554332          235789999999998888864  


Q ss_pred             -cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCC-CeEEEEecccccccccCCCCCCCCccc
Q 044905           82 -AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGV-GHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        82 -~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gV-k~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                       .|.+++++|..-..+           .+++|+-+.+++.+...+    .++ ..+|-+||.+-     .-..+....|.
T Consensus        77 pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas-----~R~~~nHtvYc  151 (245)
T KOG1207|consen   77 PIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS-----IRPLDNHTVYC  151 (245)
T ss_pred             chhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc-----ccccCCceEEe
Confidence             699999998654422           566776666666665332    232 23677776651     11112222222


Q ss_pred             hhhhhccccccHHHHHHH-----HhcCCCeEEEEeCC-CC-----CCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQK-----VIETDVSYTFIKTS-LT-----EDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~-----l~~~gl~~tilRPG-~~-----~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                           ..+  ++=+++-+     +....+++-.+.|. .|     ++|..+...+-.+. .. +..  -|..++.|.+++
T Consensus       152 -----atK--aALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~-ri-Pl~--rFaEV~eVVnA~  220 (245)
T KOG1207|consen  152 -----ATK--AALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLD-RI-PLK--RFAEVDEVVNAV  220 (245)
T ss_pred             -----ecH--HHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhh-hC-chh--hhhHHHHHHhhh
Confidence                 222  12222221     22344666666675 22     22222111010010 00 111  367788899998


Q ss_pred             HHHhcCcccc-cCcEEEEecC
Q 044905          214 ADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~~-~g~~~nI~~~  233 (427)
                      ..+|++.... .|..+-+-++
T Consensus       221 lfLLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  221 LFLLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             eeeeecCcCcccCceeeecCC
Confidence            8888754332 3445544443

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.14  E-value=6.9e-06  Score=78.18  Aligned_cols=89  Identities=17%  Similarity=0.160  Sum_probs=56.4

Q ss_pred             CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHHhcCcCEEEEcc
Q 044905           12 ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKAIGNAGKVVVTI   89 (427)
Q Consensus        12 ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~al~g~d~Vi~~a   89 (427)
                      +||++|++|++.|+++||+|+++.|+..... . .            ..++.++.++..+  .+.+.+.+.++|+|||+|
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~-~------------~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~A   89 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKTAVKP-E-P------------HPNLSIIEIENVDDLLETLEPLVKDHDVLIHSM   89 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECcccccC-C-C------------CCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCC
Confidence            5899999999999999999999998643110 0 0            1233455544322  356667778899999999


Q ss_pred             CCCCCCCCc---cccHHHHHHHHHHHHH
Q 044905           90 GPTEDGPTS---EVSTSDAFQVIQAAQL  114 (427)
Q Consensus        90 g~~~~~~~~---~vn~~~~~~ll~Aa~~  114 (427)
                      |.....+..   ..+...+.++.+.++.
T Consensus        90 Avsd~~~~~~~~~~~~~~~~~v~~~~~~  117 (229)
T PRK06732         90 AVSDYTPVYMTDLEEVSASDNLNEFLTK  117 (229)
T ss_pred             ccCCceehhhhhhhhhhhhhhhhhhhcc
Confidence            986533311   1122234455555554

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.11  E-value=2.4e-05  Score=74.30  Aligned_cols=94  Identities=26%  Similarity=0.315  Sum_probs=73.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH--HHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR--LAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~--~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      |+|+|.|+ |.+|+.|++.|.++|++|+++.++++...+...  ...             .++.+|-+|++.|.++ +.+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-------------~~v~gd~t~~~~L~~agi~~   66 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-------------HVVIGDATDEDVLEEAGIDD   66 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-------------EEEEecCCCHHHHHhcCCCc
Confidence            68999998 999999999999999999999999987665322  222             3899999999999998 889


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHH-HHcCCCeEEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAA-QLAGVGHVAI  122 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa-~~~gVk~~V~  122 (427)
                      +|+++-+.+..      .+|    .-+...+ +..|+++++.
T Consensus        67 aD~vva~t~~d------~~N----~i~~~la~~~~gv~~via   98 (225)
T COG0569          67 ADAVVAATGND------EVN----SVLALLALKEFGVPRVIA   98 (225)
T ss_pred             CCEEEEeeCCC------HHH----HHHHHHHHHhcCCCcEEE
Confidence            99999888742      233    2233333 4478998873

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.08  E-value=1.4e-05  Score=71.46  Aligned_cols=201  Identities=15%  Similarity=0.160  Sum_probs=121.6

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-----
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-----   80 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-----   80 (427)
                      -+|||+.+.+|...++.|..+|..|..++-..++..+.. ..+           .++-+.+.|+++.+.+..++.     
T Consensus        12 alvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg-----------~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen   12 ALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG-----------GKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             EEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC-----------CceEEeccccCcHHHHHHHHHHHHhh
Confidence            589999999999999999999999999998877644332 222           234489999999988888775     


Q ss_pred             --CcCEEEEccCCCCC-----------------CCCccccHHHHHHHHHHHHH--------cCCCeEEEEecccc--ccc
Q 044905           81 --NAGKVVVTIGPTED-----------------GPTSEVSTSDAFQVIQAAQL--------AGVGHVAIIYDGNT--TAA  131 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~-----------------~~~~~vn~~~~~~ll~Aa~~--------~gVk~~V~vSSs~v--~~~  131 (427)
                        ..|..++|+|....                 ....++|+.|+.|+|+....        ++-.|=|.|.+.++  +.+
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdg  160 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDG  160 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecC
Confidence              47999999997542                 11557788888888775432        12234344444443  111


Q ss_pred             ccCCCCCCCCccchhhhhcccc-c--cHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccc----eEEec-ccccCCCCCc
Q 044905          132 STYNVLDGISSFFNNLFSRNQP-L--TVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYN----VVVSA-EASVDANDYK  203 (427)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~k~~~-l--~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~----i~~~~-~~~~~~~~~~  203 (427)
                      ..     +..     .|+.++. +  ..--+.+.+...|+++..+-||+++.........    +.... +...    -.
T Consensus       161 q~-----gqa-----aysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfps----rl  226 (260)
T KOG1199|consen  161 QT-----GQA-----AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPS----RL  226 (260)
T ss_pred             cc-----chh-----hhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCch----hc
Confidence            11     111     1222110 0  0001224455678999999999887643322111    11000 1111    12


Q ss_pred             ccHHHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      =|....|..+-.+++++ -..|+++.+-+.
T Consensus       227 g~p~eyahlvqaiienp-~lngevir~dga  255 (260)
T KOG1199|consen  227 GHPHEYAHLVQAIIENP-YLNGEVIRFDGA  255 (260)
T ss_pred             CChHHHHHHHHHHHhCc-ccCCeEEEecce
Confidence            35667777887888876 346777776554

>PRK05086 malate dehydrogenase; Provisional

Probab=98.07  E-value=1.6e-05  Score=79.19  Aligned_cols=110  Identities=16%  Similarity=0.074  Sum_probs=73.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHH-C--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLR-E--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~-~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |||+|+||||.+|++++..|+. .  ++++++++|++.......+.         .+......+.+  .+.+++.+.+.+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl---------~~~~~~~~i~~--~~~~d~~~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDL---------SHIPTAVKIKG--FSGEDPTPALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhh---------hcCCCCceEEE--eCCCCHHHHcCC
Confidence            6899999999999999998855 3  46889888875421100010         00011123444  222344567899


Q ss_pred             cCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEec
Q 044905           82 AGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIYD  125 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSS  125 (427)
                      +|+||.++|......     ....|.....++++++.+++.+++|+++|
T Consensus        70 ~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         70 ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            999999999754321     34566668889999999999998887763

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=98.07  E-value=5e-06  Score=77.45  Aligned_cols=224  Identities=13%  Similarity=0.052  Sum_probs=123.9

Q ss_pred             CEEEEEcCCcHHHHHHHH-----HHHHCC----CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQ-----TLLREG----FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~-----~LL~~G----~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      ++-++-+++|+|+..|.-     ++-.-+    |.|++++|.+.+..-.                   +-..|..-    
T Consensus        13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~rit-------------------w~el~~~G----   69 (315)
T KOG3019|consen   13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARIT-------------------WPELDFPG----   69 (315)
T ss_pred             ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccc-------------------cchhcCCC----
Confidence            356677899999988776     554444    9999999999864321                   11111100    


Q ss_pred             HHHhcCcCEEEEccCCCCC------CC-------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCC-
Q 044905           76 AKAIGNAGKVVVTIGPTED------GP-------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDG-  139 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~~~~------~~-------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~-  139 (427)
                        +--.|+.+++++|..-.      .+       ...++  .+..+.++...+-  .+.+|.++..++|.-+.....+. 
T Consensus        70 --ip~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~--~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~  145 (315)
T KOG3019|consen   70 --IPISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIR--VTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEK  145 (315)
T ss_pred             --CceehHHHHhhhhhhccCchhhcCHHHHHHhhcceee--HHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccc
Confidence              00024444444432211      11       22334  4566788877664  45688888777665433332221 


Q ss_pred             CCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCC----ccceEEecccccCCC---CCcccHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPES----SYNVVVSAEASVDAN---DYKVAKSQIASL  212 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~----~~~i~~~~~~~~~~~---~~~i~v~DVA~~  212 (427)
                      ...-.-.++++.- +.+|..... .....+.+++|.|..-....+.    ...+.+.-.+...++   ++|||++|++..
T Consensus       146 ~~~qgfd~~srL~-l~WE~aA~~-~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~l  223 (315)
T KOG3019|consen  146 IVHQGFDILSRLC-LEWEGAALK-ANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNL  223 (315)
T ss_pred             cccCChHHHHHHH-HHHHHHhhc-cCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHH
Confidence            1111112333211 123322211 1345899999986221111111    111122112222222   268999999999


Q ss_pred             HHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccchhhhHHHHH
Q 044905          213 VADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYAEALA  262 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~~~~~  262 (427)
                      +..+|+++  ...+++|-..+.   ..+..|+.+.++...+++.|....+
T Consensus       224 i~~ale~~--~v~GViNgvAP~---~~~n~Ef~q~lg~aL~Rp~~~pvP~  268 (315)
T KOG3019|consen  224 IYEALENP--SVKGVINGVAPN---PVRNGEFCQQLGSALSRPSWLPVPD  268 (315)
T ss_pred             HHHHHhcC--CCCceecccCCC---ccchHHHHHHHHHHhCCCcccCCcH
Confidence            99999875  356777777776   6778899999998888887776554

>PRK09620 hypothetical protein; Provisional

Probab=98.00  E-value=8.7e-06  Score=77.47  Aligned_cols=81  Identities=16%  Similarity=0.174  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCC----------------cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE
Q 044905            3 DSGTVFVAGAT----------------GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE   66 (427)
Q Consensus         3 ~~~kIlItGAT----------------G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~   66 (427)
                      ..++|+||+|-                ||+|++|+++|+++|++|+++.+..+........+           .++..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~-----------~~~~~V~   70 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQ-----------LELHPFE   70 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCc-----------eeEEEEe
Confidence            56799999874                99999999999999999999886432111000000           1122456


Q ss_pred             ecCCCHHHHHHHhc--CcCEEEEccCCCCC
Q 044905           67 SNFDSAESIAKAIG--NAGKVVVTIGPTED   94 (427)
Q Consensus        67 gDl~D~~sl~~al~--g~d~Vi~~ag~~~~   94 (427)
                      ++....+.+.+++.  ++|+|||+|+....
T Consensus        71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         71 GIIDLQDKMKSIITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             cHHHHHHHHHHHhcccCCCEEEECccccce
Confidence            64444567888884  68999999997543

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=97.98  E-value=1.3e-05  Score=81.83  Aligned_cols=99  Identities=13%  Similarity=0.238  Sum_probs=65.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH-Hhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK-AIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~-al~   80 (427)
                      ++++|+|.||||++|..|++.|+.+ +++|+.+.++.+..+.+......             +..+|+.+...+.. .++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~-------------l~~~~~~~~~~~~~~~~~  103 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPH-------------LITQDLPNLVAVKDADFS  103 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCcc-------------ccCccccceecCCHHHhc
Confidence            4569999999999999999999998 58999999875543222221111             23334433333332 268


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      ++|+||.+.+..           .+.+++.++ ..| .++|-+|+..
T Consensus       104 ~~DvVf~Alp~~-----------~s~~i~~~~-~~g-~~VIDlSs~f  137 (381)
T PLN02968        104 DVDAVFCCLPHG-----------TTQEIIKAL-PKD-LKIVDLSADF  137 (381)
T ss_pred             CCCEEEEcCCHH-----------HHHHHHHHH-hCC-CEEEEcCchh
Confidence            899999987642           556777776 455 3677666544

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.88  E-value=4.9e-05  Score=76.24  Aligned_cols=71  Identities=25%  Similarity=0.200  Sum_probs=54.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-C-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-G-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++|+||||+|++|+.++++|+.+ | .+++++.|+..++..+...                +..+++.   .+..++.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e----------------l~~~~i~---~l~~~l~  214 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE----------------LGGGKIL---SLEEALP  214 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH----------------hccccHH---hHHHHHc
Confidence            4578999999999999999999865 5 6899999987766555321                2223333   4667899


Q ss_pred             CcCEEEEccCCC
Q 044905           81 NAGKVVVTIGPT   92 (427)
Q Consensus        81 g~d~Vi~~ag~~   92 (427)
                      ++|+|||+++..
T Consensus       215 ~aDiVv~~ts~~  226 (340)
T PRK14982        215 EADIVVWVASMP  226 (340)
T ss_pred             cCCEEEECCcCC
Confidence            999999999864

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.83  E-value=0.00029  Score=61.96  Aligned_cols=109  Identities=18%  Similarity=0.142  Sum_probs=70.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |||.|+||+|.+|++++..|+..+  .+++.++++.+++....-...+   .......+..+..++       .+.++++
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~---~~~~~~~~~~i~~~~-------~~~~~~a   70 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH---ASAPLPSPVRITSGD-------YEALKDA   70 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH---HHHGSTEEEEEEESS-------GGGGTTE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh---hhhhccccccccccc-------ccccccc
Confidence            689999999999999999999987  5899999997654322110000   000001112222222       3458899


Q ss_pred             CEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||.++|.... +.    ..+.|..-...+.+.+.+.+-..++.+
T Consensus        71 Divvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~viv  116 (141)
T PF00056_consen   71 DIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIV  116 (141)
T ss_dssp             SEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE
T ss_pred             cEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEE
Confidence            999999997543 22    335666667777888888775444433

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.80  E-value=5.9e-05  Score=75.87  Aligned_cols=85  Identities=20%  Similarity=0.212  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++|+|.||||++|+.|++.|.++||   ++++++|+.+..+.+.-.+             .+++..|+.+.     .+.
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g-------------~~i~v~d~~~~-----~~~   62 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG-------------KELKVEDLTTF-----DFS   62 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC-------------ceeEEeeCCHH-----HHc
Confidence            57999999999999999999999875   5588887765433331111             13555566432     346


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      ++|+||.++|..           -+..++..+..+|+
T Consensus        63 ~vDvVf~A~g~g-----------~s~~~~~~~~~~G~   88 (334)
T PRK14874         63 GVDIALFSAGGS-----------VSKKYAPKAAAAGA   88 (334)
T ss_pred             CCCEEEECCChH-----------HHHHHHHHHHhCCC
Confidence            899999988653           33556666666776

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.79  E-value=6.5e-05  Score=73.79  Aligned_cols=90  Identities=22%  Similarity=0.292  Sum_probs=70.2

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      .++|.|||||.|..++++|.++|.+-..-.||..++..+.. ++.+             .-...+.++..+.+.+..+++
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~-------------~~~~p~~~p~~~~~~~~~~~V   74 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE-------------AAVFPLGVPAALEAMASRTQV   74 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc-------------ccccCCCCHHHHHHHHhcceE
Confidence            59999999999999999999999988778899888776643 3443             444456669999999999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      |+||+||...     .-    .-|+++|..+|.
T Consensus        75 VlncvGPyt~-----~g----~plv~aC~~~GT   98 (382)
T COG3268          75 VLNCVGPYTR-----YG----EPLVAACAAAGT   98 (382)
T ss_pred             EEeccccccc-----cc----cHHHHHHHHhCC
Confidence            9999998642     11    336666766665

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.76  E-value=0.00071  Score=56.72  Aligned_cols=91  Identities=21%  Similarity=0.244  Sum_probs=68.8

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcCEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAGKV   85 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d~V   85 (427)
                      |+|.|. |.+|..|++.|.+.++.|+++.+++.....+...+.             .++.||.+|++.|.++ ++.++.|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~-------------~~i~gd~~~~~~l~~a~i~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGV-------------EVIYGDATDPEVLERAGIEKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTS-------------EEEES-TTSHHHHHHTTGGCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhccc-------------ccccccchhhhHHhhcCccccCEE
Confidence            678897 899999999999977899999999988777766554             4899999999999885 6789999


Q ss_pred             EEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEE
Q 044905           86 VVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVA  121 (427)
Q Consensus        86 i~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V  121 (427)
                      |.+...      -.    ....++..++.. +..+++
T Consensus        67 v~~~~~------d~----~n~~~~~~~r~~~~~~~ii   93 (116)
T PF02254_consen   67 VILTDD------DE----ENLLIALLARELNPDIRII   93 (116)
T ss_dssp             EEESSS------HH----HHHHHHHHHHHHTTTSEEE
T ss_pred             EEccCC------HH----HHHHHHHHHHHHCCCCeEE
Confidence            987752      12    334566667764 344555

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.75  E-value=0.00018  Score=74.99  Aligned_cols=94  Identities=21%  Similarity=0.247  Sum_probs=72.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~   82 (427)
                      |+|+|+|+ |.+|+++++.|.++|++|+++++++.....+.. .+             +.++.||.++...+.++ +.++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~-------------~~~~~gd~~~~~~l~~~~~~~a   66 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLD-------------VRTVVGNGSSPDVLREAGAEDA   66 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcC-------------EEEEEeCCCCHHHHHHcCCCcC
Confidence            58999998 999999999999999999999999887665543 22             24889999999999988 8899


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEEE
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVAI  122 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V~  122 (427)
                      |.||.+...      ...|    ..++..++.. +..++|.
T Consensus        67 ~~vi~~~~~------~~~n----~~~~~~~r~~~~~~~ii~   97 (453)
T PRK09496         67 DLLIAVTDS------DETN----MVACQIAKSLFGAPTTIA   97 (453)
T ss_pred             CEEEEecCC------hHHH----HHHHHHHHHhcCCCeEEE
Confidence            999987753      2233    2345556654 6555553

>cd00704 MDH Malate dehydrogenase

Probab=97.72  E-value=0.00021  Score=71.55  Aligned_cols=97  Identities=10%  Similarity=0.023  Sum_probs=66.0

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEecCc--chHHHHHHHHhhhhhhhhhhhccceEEEecCCCH----
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG-------FSVRAGVPEL--GAAQELARLAASYKILSKEELKRLNAVESNFDSA----   72 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G-------~~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~----   72 (427)
                      +|+|+||+|++|+.++..|+..|       ++++.++++.  +.+.                     ....|+.|.    
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~---------------------g~~~Dl~d~~~~~   60 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE---------------------GVVMELQDCAFPL   60 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc---------------------eeeeehhhhcccc
Confidence            79999999999999999999866       2599998876  3211                     112222221    


Q ss_pred             -------HHHHHHhcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcC-CCeEEEE
Q 044905           73 -------ESIAKAIGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAG-VGHVAII  123 (427)
Q Consensus        73 -------~sl~~al~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~g-Vk~~V~v  123 (427)
                             ....+.++++|+|||++|......     ....|..-...+...+.+.+ -..++++
T Consensus        61 ~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv  124 (323)
T cd00704          61 LKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLV  124 (323)
T ss_pred             cCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEE
Confidence                   234678999999999999754321     34556666778888888774 4444433

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=97.65  E-value=0.00012  Score=75.16  Aligned_cols=75  Identities=15%  Similarity=0.230  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE
Q 044905            2 KDSGTVFVAGA----------------TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV   65 (427)
Q Consensus         2 ~~~~kIlItGA----------------TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv   65 (427)
                      +..++|+||||                ||.+|.+++++|.++|++|+++.++.+ .. .    ..            .+.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-~----~~------------~~~  247 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-T----PA------------GVK  247 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-C----CC------------CcE
Confidence            34678999999                999999999999999999999998753 11 0    00            145


Q ss_pred             EecCCCHHHHHHHh----cCcCEEEEccCCCCC
Q 044905           66 ESNFDSAESIAKAI----GNAGKVVVTIGPTED   94 (427)
Q Consensus        66 ~gDl~D~~sl~~al----~g~d~Vi~~ag~~~~   94 (427)
                      ..|+++.+++.+++    ..+|++||+||....
T Consensus       248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        248 RIDVESAQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             EEccCCHHHHHHHHHHhcCCCCEEEEccccccc
Confidence            67999987777665    468999999997544

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.64  E-value=0.00032  Score=69.10  Aligned_cols=81  Identities=16%  Similarity=0.105  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCc---chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPEL---GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~---~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ..++++|+|| |.+|++++..|+..|+. |+++.|+.   ++++.+......       ....+.+...|+.|.+.+...
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~-------~~~~~~~~~~d~~~~~~~~~~  196 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQ-------EVPECIVNVYDLNDTEKLKAE  196 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhh-------cCCCceeEEechhhhhHHHhh
Confidence            3568999999 89999999999999985 99999997   455444332111       011233566889888888888


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      +..+|+||++...
T Consensus       197 ~~~~DilINaTp~  209 (289)
T PRK12548        197 IASSDILVNATLV  209 (289)
T ss_pred             hccCCEEEEeCCC
Confidence            8899999997754

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.62  E-value=0.00037  Score=78.99  Aligned_cols=78  Identities=23%  Similarity=0.252  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-Ce-------------EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FS-------------VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN   68 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~-------------V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD   68 (427)
                      .+++|+|+|| |++|+.+++.|.+.+ ++             |++.++++..++.+...           .+++..+..|
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~-----------~~~~~~v~lD  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG-----------IENAEAVQLD  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh-----------cCCCceEEee
Confidence            3678999998 999999999998863 44             77788887766665432           1234579999


Q ss_pred             CCCHHHHHHHhcCcCEEEEccCCC
Q 044905           69 FDSAESIAKAIGNAGKVVVTIGPT   92 (427)
Q Consensus        69 l~D~~sl~~al~g~d~Vi~~ag~~   92 (427)
                      +.|.+++.+++.++|+||++..+.
T Consensus       636 v~D~e~L~~~v~~~DaVIsalP~~  659 (1042)
T PLN02819        636 VSDSESLLKYVSQVDVVISLLPAS  659 (1042)
T ss_pred             cCCHHHHHHhhcCCCEEEECCCch
Confidence            999999999999999999998764

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=97.59  E-value=0.00025  Score=67.40  Aligned_cols=90  Identities=13%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-----CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG-----FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G-----~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |..+-++|||+++.+|-.||.+|++..     .++++.+|+.+++++.-+....   +++...-++++|..|+++..++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~---f~p~~~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKA---FHPKSTIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHH---hCCCceeEEEEEEEehhhHHHHH
Confidence            344568999999999999999999864     5677888999987655333222   12222346789999999977666


Q ss_pred             HHh-------cCcCEEEEccCCCCC
Q 044905           77 KAI-------GNAGKVVVTIGPTED   94 (427)
Q Consensus        77 ~al-------~g~d~Vi~~ag~~~~   94 (427)
                      .+.       +..|.|+.+||.+..
T Consensus        78 ~A~~di~~rf~~ld~iylNAg~~~~  102 (341)
T KOG1478|consen   78 RASKDIKQRFQRLDYIYLNAGIMPN  102 (341)
T ss_pred             HHHHHHHHHhhhccEEEEccccCCC
Confidence            554       568999999998664

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.59  E-value=0.00023  Score=71.80  Aligned_cols=93  Identities=19%  Similarity=0.229  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccce-EEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLN-AVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~-vv~gDl~D~~sl~~al~g   81 (427)
                      |++|+|+||||++|+.+++.|++. +++++++.++.+..+.+......           +. ....++.+.+..  .+.+
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~-----------~~~~~~~~~~~~~~~--~~~~   68 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPH-----------LRGLVDLVLEPLDPE--ILAG   68 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcc-----------cccccCceeecCCHH--HhcC
Confidence            479999999999999999999987 68988888754332222211110           01 112233333332  4578


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||.|.+..           ....++.++.++|+ ++|
T Consensus        69 vD~Vf~alP~~-----------~~~~~v~~a~~aG~-~VI   96 (343)
T PRK00436         69 ADVVFLALPHG-----------VSMDLAPQLLEAGV-KVI   96 (343)
T ss_pred             CCEEEECCCcH-----------HHHHHHHHHHhCCC-EEE
Confidence            99999987642           33557777766775 565

>PRK04148 hypothetical protein; Provisional

Probab=97.52  E-value=0.00086  Score=58.31  Aligned_cols=91  Identities=18%  Similarity=0.161  Sum_probs=71.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|++.|. | .|.+++..|.+.|++|++++.++...+.....+.             .++.+|+.+++  ....+++|
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~-------------~~v~dDlf~p~--~~~y~~a~   79 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGL-------------NAFVDDLFNPN--LEIYKNAK   79 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCC-------------eEEECcCCCCC--HHHHhcCC
Confidence            468999996 7 8999999999999999999999987665555444             48999999987  35688999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .|+..=.+.      +    ....+++.|++.|+.-++
T Consensus        80 liysirpp~------e----l~~~~~~la~~~~~~~~i  107 (134)
T PRK04148         80 LIYSIRPPR------D----LQPFILELAKKINVPLII  107 (134)
T ss_pred             EEEEeCCCH------H----HHHHHHHHHHHcCCCEEE
Confidence            998754432      2    335699999999998655

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.50  E-value=0.001  Score=69.20  Aligned_cols=100  Identities=21%  Similarity=0.250  Sum_probs=74.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      .+++|+|.|+ |.+|+.+++.|.+.|++|+++.++++....+...+           ..+.++.||.+|.+.|.++ +.+
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-----------~~~~~i~gd~~~~~~L~~~~~~~  297 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-----------PNTLVLHGDGTDQELLEEEGIDE  297 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-----------CCCeEEECCCCCHHHHHhcCCcc
Confidence            3678999998 99999999999999999999999988766654432           1235899999999988654 578


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++.||.+...      ...|    ..+...|+..++.+++...
T Consensus       298 a~~vi~~~~~------~~~n----~~~~~~~~~~~~~~ii~~~  330 (453)
T PRK09496        298 ADAFIALTND------DEAN----ILSSLLAKRLGAKKVIALV  330 (453)
T ss_pred             CCEEEECCCC------cHHH----HHHHHHHHHhCCCeEEEEE
Confidence            9999876553      1233    2244456677877776543

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.49  E-value=0.00048  Score=60.00  Aligned_cols=75  Identities=21%  Similarity=0.214  Sum_probs=56.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++++|.|| |..|+.++..|...|+. |+++.|+.++++.+......           ..+-..++.+   +...+..
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~-----------~~~~~~~~~~---~~~~~~~   75 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG-----------VNIEAIPLED---LEEALQE   75 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG-----------CSEEEEEGGG---HCHHHHT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc-----------cccceeeHHH---HHHHHhh
Confidence            4679999998 88999999999999975 99999999988877654311           0133444444   4467889


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||++.+..
T Consensus        76 ~DivI~aT~~~   86 (135)
T PF01488_consen   76 ADIVINATPSG   86 (135)
T ss_dssp             ESEEEE-SSTT
T ss_pred             CCeEEEecCCC
Confidence            99999988764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.47  E-value=0.00051  Score=58.61  Aligned_cols=92  Identities=20%  Similarity=0.276  Sum_probs=55.9

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +|+|+||||++|+.|++.|++.. +++..+..+.. ....+......     ......+.+..   .|.+    .+.++|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~~~---~~~~----~~~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPH-----PKGFEDLSVED---ADPE----ELSDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGG-----GTTTEEEBEEE---TSGH----HHTTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccc-----cccccceeEee---cchh----HhhcCC
Confidence            69999999999999999999975 67666554443 32222221111     00111222222   3333    358899


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +||+|.+..           .+..+...+.+.|+ ++|
T Consensus        69 vvf~a~~~~-----------~~~~~~~~~~~~g~-~Vi   94 (121)
T PF01118_consen   69 VVFLALPHG-----------ASKELAPKLLKAGI-KVI   94 (121)
T ss_dssp             EEEE-SCHH-----------HHHHHHHHHHHTTS-EEE
T ss_pred             EEEecCchh-----------HHHHHHHHHhhCCc-EEE
Confidence            999987642           44667777788888 444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=97.46  E-value=0.00087  Score=68.16  Aligned_cols=82  Identities=20%  Similarity=0.202  Sum_probs=57.6

Q ss_pred             CCEEEEEcCCcHHHHH--HHHHHHHCCCeEEEEecCcchHH------------HHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            4 SGTVFVAGATGQAGVR--IAQTLLREGFSVRAGVPELGAAQ------------ELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         4 ~~kIlItGATG~iG~~--lv~~LL~~G~~V~al~R~~~~~~------------~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      .+++||||+++.+|.+  +++.| ++|+.|.++.+......            .+......       .......+.+|+
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~-------~G~~a~~i~~DV  112 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA-------AGLYAKSINGDA  112 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-------cCCceEEEEcCC
Confidence            4789999999999999  89999 99999998885432111            11111000       001234689999


Q ss_pred             CCHHHHHHHhc-------CcCEEEEccCCCC
Q 044905           70 DSAESIAKAIG-------NAGKVVVTIGPTE   93 (427)
Q Consensus        70 ~D~~sl~~al~-------g~d~Vi~~ag~~~   93 (427)
                      +|.+++.++++       ++|++||+++...
T Consensus       113 ss~E~v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        113 FSDEIKQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            99888776653       5899999999763

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.42  E-value=0.00091  Score=69.75  Aligned_cols=78  Identities=21%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+|+|+++ +|..+++.|+++|++|++.+++.. ..........         ..++.++.+|..|     ..+.
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~---------~~~~~~~~~~~~~-----~~~~   67 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG---------ELGIELVLGEYPE-----EFLE   67 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---------hcCCEEEeCCcch-----hHhh
Confidence            3467999999966 999999999999999999998753 2221111100         1134477788766     3457


Q ss_pred             CcCEEEEccCCCCC
Q 044905           81 NAGKVVVTIGPTED   94 (427)
Q Consensus        81 g~d~Vi~~ag~~~~   94 (427)
                      ++|+||+++|....
T Consensus        68 ~~d~vv~~~g~~~~   81 (450)
T PRK14106         68 GVDLVVVSPGVPLD   81 (450)
T ss_pred             cCCEEEECCCCCCC
Confidence            89999999986543

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.42  E-value=0.00021  Score=66.90  Aligned_cols=195  Identities=12%  Similarity=0.115  Sum_probs=104.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      +-|||||+|-.||..++..+++.+-+.....++....+ +....+.++       +..-.+.+|++....+...++    
T Consensus         7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~g-------d~~v~~~g~~~e~~~l~al~e~~r~   78 (253)
T KOG1204|consen    7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYG-------DDFVHVVGDITEEQLLGALREAPRK   78 (253)
T ss_pred             eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEec-------CCcceechHHHHHHHHHHHHhhhhh
Confidence            35899999999999999999998855443333322111 111111110       111134445554443333332    


Q ss_pred             ---CcCEEEEccCCCCC------CC--------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCC
Q 044905           81 ---NAGKVVVTIGPTED------GP--------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~------~~--------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                         .-|.|||++|....      ++        ++++|+.+...+...+..    .. .+.+|++||.+.        ..
T Consensus        79 k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aa--------v~  150 (253)
T KOG1204|consen   79 KGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAA--------VR  150 (253)
T ss_pred             cCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhh--------hc
Confidence               36999999996543      11        567777777766665543    22 367888887762        12


Q ss_pred             CCCccchhhhhccccccHHHHH-HHHh--cC-CCeEEEEeCCCCCCCCCCCcc-ceEEeccc-----ccCCCCCcccHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFL-QKVI--ET-DVSYTFIKTSLTEDFSPESSY-NVVVSAEA-----SVDANDYKVAKSQ  208 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l-~~l~--~~-gl~~tilRPG~~~~~~~~~~~-~i~~~~~~-----~~~~~~~~i~v~D  208 (427)
                      +++.|.  +|...+  ++.+++ ..+.  +. ++.+..++||.++..-.-... .....+..     .....-..++..+
T Consensus       151 p~~~wa--~yc~~K--aAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~  226 (253)
T KOG1204|consen  151 PFSSWA--AYCSSK--AARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQV  226 (253)
T ss_pred             cccHHH--HhhhhH--HHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhh
Confidence            344444  333332  234433 3333  44 788999999988753211000 01011100     0001114677888


Q ss_pred             HHHHHHHHhcC
Q 044905          209 IASLVADVFSN  219 (427)
Q Consensus       209 VA~~v~~al~~  219 (427)
                      .|..+..++..
T Consensus       227 ~a~~l~~L~e~  237 (253)
T KOG1204|consen  227 TAKVLAKLLEK  237 (253)
T ss_pred             HHHHHHHHHHh
Confidence            88888877764

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=97.38  E-value=0.0098  Score=56.04  Aligned_cols=212  Identities=11%  Similarity=0.098  Sum_probs=115.4

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..+++||+|-.  -.|+-.|++.|.++|.++...-.++.-.+++.+...+.        ..-.+++||++|.+++..+|
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~--------~s~~v~~cDV~~d~~i~~~f   75 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL--------GSDLVLPCDVTNDESIDALF   75 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhc--------cCCeEEecCCCCHHHHHHHH
Confidence            356799999954  47899999999999999887776653222232222221        01137999999999888887


Q ss_pred             c-------CcCEEEEccCCCCC----CCCccc-----------cHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GPTSEV-----------STSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~~~~v-----------n~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                      +       ..|.++|+++..+.    +.+.++           ...+-..+.++|+..  +-..+|-++    |.++.  
T Consensus        76 ~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~--  149 (259)
T COG0623          76 ATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSE--  149 (259)
T ss_pred             HHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccce--
Confidence            5       47999999998764    222222           222223333344321  222344222    11111  


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC---ccceEEec-ccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES---SYNVVVSA-EASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~---~~~i~~~~-~~~~~~~~~~i~v~  207 (427)
                        .-.|.|...-..|.   +.|.-.+.+.    ..|+++--|-.|.+-......   ...+.... ...+..  ..++.+
T Consensus       150 --r~vPnYNvMGvAKA---aLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~--r~vt~e  222 (259)
T COG0623         150 --RVVPNYNVMGVAKA---ALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLR--RNVTIE  222 (259)
T ss_pred             --eecCCCchhHHHHH---HHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCcc--CCCCHH
Confidence              11233332222222   1333333332    457887777766443221100   01111111 111222  367899


Q ss_pred             HHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      ||+...+.++++.. ...|+++++-++-
T Consensus       223 eVG~tA~fLlSdLssgiTGei~yVD~G~  250 (259)
T COG0623         223 EVGNTAAFLLSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             HhhhhHHHHhcchhcccccceEEEcCCc
Confidence            99999998887543 3467888777664

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.37  E-value=0.00059  Score=67.78  Aligned_cols=39  Identities=31%  Similarity=0.362  Sum_probs=34.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE   43 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~   43 (427)
                      +++|.|+| +|.+|+.++..|+++|++|++++|+++..+.
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~   40 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA   40 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence            56899999 5999999999999999999999999875443

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.36  E-value=0.00092  Score=66.97  Aligned_cols=97  Identities=12%  Similarity=0.026  Sum_probs=65.0

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHH---
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAE---   73 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~---   73 (427)
                      +|+|+||+|.+|+.++..|+..|.       +++.+++++..  +.                     .+..|+.|..   
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~---------------------g~~~Dl~d~~~~~   59 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLE---------------------GVVMELMDCAFPL   59 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccc---------------------eeEeehhcccchh
Confidence            589999999999999999998652       69999986542  11                     2222222221   


Q ss_pred             --------HHHHHhcCcCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcC-CCeEEEE
Q 044905           74 --------SIAKAIGNAGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAG-VGHVAII  123 (427)
Q Consensus        74 --------sl~~al~g~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~g-Vk~~V~v  123 (427)
                              .....+.++|+||+++|..... .    ....|..-...+.....+++ -.-++++
T Consensus        60 ~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiiv  123 (324)
T TIGR01758        60 LDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLV  123 (324)
T ss_pred             cCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence                    2356799999999999975431 1    33455556677777877774 4444444

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.35  E-value=0.0016  Score=58.43  Aligned_cols=105  Identities=17%  Similarity=0.225  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |++|.++|. |..|+.+++.|+++||+|++..|++++.+.+...+.+..--..+-..+..++..-+.|.+.+...+.+-+
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~   79 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGEN   79 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTT
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhH
Confidence            679999997 9999999999999999999999999888888766543211111112344566666677666666655522


Q ss_pred             --------EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           84 --------KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        84 --------~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                              .+|...        ..+....+..+.+.+...|+
T Consensus        80 i~~~l~~g~iiid~--------sT~~p~~~~~~~~~~~~~g~  113 (163)
T PF03446_consen   80 ILAGLRPGKIIIDM--------STISPETSRELAERLAAKGV  113 (163)
T ss_dssp             HGGGS-TTEEEEE---------SS--HHHHHHHHHHHHHTTE
T ss_pred             HhhccccceEEEec--------CCcchhhhhhhhhhhhhccc
Confidence                    122111        12223355667777777774

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.29  E-value=0.00088  Score=67.38  Aligned_cols=88  Identities=17%  Similarity=0.208  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++|++|+|+||||++|..|++.|.+++|   +++.+....+.-+.+.-.+                ...++.+.+..  .
T Consensus         2 ~~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----------------~~l~~~~~~~~--~   63 (336)
T PRK05671          2 SQPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----------------KNLRVREVDSF--D   63 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----------------cceEEeeCChH--H
Confidence            3457999999999999999999998765   3444443322211111000                12233222221  1


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +.++|+||.+.+..           .+..++..+.++|++
T Consensus        64 ~~~vD~vFla~p~~-----------~s~~~v~~~~~~G~~   92 (336)
T PRK05671         64 FSQVQLAFFAAGAA-----------VSRSFAEKARAAGCS   92 (336)
T ss_pred             hcCCCEEEEcCCHH-----------HHHHHHHHHHHCCCe
Confidence            57899999987631           235588888888874

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.29  E-value=0.00083  Score=67.99  Aligned_cols=103  Identities=20%  Similarity=0.129  Sum_probs=58.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |++++|+|+||||++|+.|++.|++.. .+++++.++.+...........+...... ...+.-+.....+++.    +.
T Consensus         1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~----~~   75 (349)
T PRK08664          1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPI-PEEVADMEVVSTDPEA----VD   75 (349)
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccc-cccccceEEEeCCHHH----hc
Confidence            567899999999999999999999876 59998866654322111100000000000 0000001111224443    36


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV  120 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~  120 (427)
                      ++|+||.+.+..           .+..+++.+...|++.|
T Consensus        76 ~~DvVf~a~p~~-----------~s~~~~~~~~~~G~~vI  104 (349)
T PRK08664         76 DVDIVFSALPSD-----------VAGEVEEEFAKAGKPVF  104 (349)
T ss_pred             CCCEEEEeCChh-----------HHHHHHHHHHHCCCEEE
Confidence            899998876531           23556677777888543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.28  E-value=0.0029  Score=63.14  Aligned_cols=111  Identities=16%  Similarity=0.150  Sum_probs=70.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..+||.|+|+ |.+|+.++..|+..|.  ++..++++.+.+....-...+. .  +. ..+..+. .  .|    .+.+
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~-~--~~-~~~~~i~-~--~~----~~~~   71 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA-V--PF-TSPTKIY-A--GD----YSDC   71 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh-c--cc-cCCeEEE-e--CC----HHHh
Confidence            45679999998 9999999999999985  8999999877543221111100 0  00 0122222 2  22    2458


Q ss_pred             cCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           80 GNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +++|+||.++|.... +.    ....|..-...++..+.+.+..-++++.
T Consensus        72 ~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivv  121 (315)
T PRK00066         72 KDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVA  121 (315)
T ss_pred             CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            999999999997543 11    3445655667777778777766555443

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.27  E-value=0.00058  Score=64.95  Aligned_cols=66  Identities=17%  Similarity=0.232  Sum_probs=45.7

Q ss_pred             CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-------hcCcCE
Q 044905           12 ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-------IGNAGK   84 (427)
Q Consensus        12 ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-------l~g~d~   84 (427)
                      +||++|.+|++.|+++|++|+++.|...    +...               ....+|+.|.+++.++       +.++|+
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~~----l~~~---------------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKRA----LKPE---------------PHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChhh----cccc---------------cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            4899999999999999999998876311    1000               0123577776655544       346899


Q ss_pred             EEEccCCCCCCC
Q 044905           85 VVVTIGPTEDGP   96 (427)
Q Consensus        85 Vi~~ag~~~~~~   96 (427)
                      +||+||.....+
T Consensus        84 LVnnAgv~d~~~   95 (227)
T TIGR02114        84 LIHSMAVSDYTP   95 (227)
T ss_pred             EEECCEeccccc
Confidence            999999755444

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.22  E-value=0.00058  Score=68.84  Aligned_cols=83  Identities=14%  Similarity=0.191  Sum_probs=54.9

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEE---EEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVR---AGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~---al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +|+|.||||++|+.|++.|.+++|.+.   .+.+..+..+.+.-.+             .+++..|+. .    ..+.++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~-------------~~~~~~~~~-~----~~~~~~   62 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKG-------------KELEVNEAK-I----ESFEGI   62 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCC-------------eeEEEEeCC-h----HHhcCC
Confidence            589999999999999999999887654   4446544322221111             135556663 1    235789


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      |+||.++|..           -+..++..+...|+
T Consensus        63 D~v~~a~g~~-----------~s~~~a~~~~~~G~   86 (339)
T TIGR01296        63 DIALFSAGGS-----------VSKEFAPKAAKCGA   86 (339)
T ss_pred             CEEEECCCHH-----------HHHHHHHHHHHCCC
Confidence            9999998753           33456666666777

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.15  E-value=0.0027  Score=65.86  Aligned_cols=42  Identities=19%  Similarity=0.111  Sum_probs=38.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQEL   44 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l   44 (427)
                      |.+++|.|+|. |++|..++..|+++||+|+++++++.+.+.+
T Consensus         1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l   42 (415)
T PRK11064          1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTI   42 (415)
T ss_pred             CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence            66789999996 9999999999999999999999999877654

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=97.15  E-value=0.0014  Score=61.85  Aligned_cols=78  Identities=24%  Similarity=0.215  Sum_probs=52.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+||+|.+|+.++..|++.|++|++..|++++...+.......  +   ....+.. .....+   ...+++.+|+
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~--~---~~~g~~~-~~~~~~---~~ea~~~aDv   71 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEE--L---GHGGSDI-KVTGAD---NAEAAKRADV   71 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhh--c---cccCCCc-eEEEeC---hHHHHhcCCE
Confidence            58999999999999999999999999999999987765554322110  0   0000000 000112   2456778999


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.++.+
T Consensus        72 Vilavp~   78 (219)
T TIGR01915        72 VILAVPW   78 (219)
T ss_pred             EEEECCH
Confidence            9998864

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.15  E-value=0.0019  Score=64.32  Aligned_cols=110  Identities=12%  Similarity=0.106  Sum_probs=65.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCc--chHHHHHHHHhhhhhhhhhhhccce-EEEecCCCHHHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPEL--GAAQELARLAASYKILSKEELKRLN-AVESNFDSAESIAKAI   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~-vv~gDl~D~~sl~~al   79 (427)
                      |+|.|+|+||++|..++..|+..|+  +|++++|+.  +++......     +.+..-..... -+.+. .|    ...+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~d-----l~d~~~~~~~~~~i~~~-~d----~~~l   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLD-----IYDALAAAGIDAEIKIS-SD----LSDV   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccch-----hhhchhccCCCcEEEEC-CC----HHHh
Confidence            6899999999999999999999985  599999954  322111000     00000000000 11111 23    2359


Q ss_pred             cCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           80 GNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .++|+||.++|......     ....|..-...+++.+.+.+-..++++-
T Consensus        71 ~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~  120 (309)
T cd05294          71 AGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVV  120 (309)
T ss_pred             CCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            99999999999644311     2244555667777777766654444443

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.15  E-value=0.0013  Score=66.55  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=57.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEE-EecCC--CHHHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-GFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAV-ESNFD--SAESIAKAI   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv-~gDl~--D~~sl~~al   79 (427)
                      ++|+|+||||++|..+++.|++. +++++.+ +++.+..+.+.....           .+... ..++.  |.+   +++
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-----------~l~~~~~~~~~~~~~~---~~~   66 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-----------HLRGLVDLNLEPIDEE---EIA   66 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-----------cccccCCceeecCCHH---Hhh
Confidence            58999999999999999999987 5788855 544322222211110           00010 11122  333   333


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .++|+||.|.+..           .+..++..+..+|+ ++|=+|
T Consensus        67 ~~~DvVf~alP~~-----------~s~~~~~~~~~~G~-~VIDlS   99 (346)
T TIGR01850        67 EDADVVFLALPHG-----------VSAELAPELLAAGV-KVIDLS   99 (346)
T ss_pred             cCCCEEEECCCch-----------HHHHHHHHHHhCCC-EEEeCC
Confidence            5899999988642           44667777777774 666444

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.13  E-value=0.0024  Score=69.26  Aligned_cols=90  Identities=17%  Similarity=0.235  Sum_probs=72.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~   82 (427)
                      .++|+|.|. |.+|+.+++.|.++|++++++++|++..+.+...+.             .++.||.+|++.+.++ ++++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~-------------~v~~GDat~~~~L~~agi~~A  465 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGY-------------KVYYGDATQLELLRAAGAEKA  465 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCC-------------eEEEeeCCCHHHHHhcCCccC
Confidence            357999997 999999999999999999999999988777655443             4899999999999876 6789


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      +.+|.+...      .+    ....++..+++.+.
T Consensus       466 ~~vv~~~~d------~~----~n~~i~~~~r~~~p  490 (601)
T PRK03659        466 EAIVITCNE------PE----DTMKIVELCQQHFP  490 (601)
T ss_pred             CEEEEEeCC------HH----HHHHHHHHHHHHCC
Confidence            999887753      12    33557777877653

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.11  E-value=0.0024  Score=56.30  Aligned_cols=75  Identities=20%  Similarity=0.186  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.++|+|+|+ |.+|..+++.|++.| +.|+++.|++++...+......            ..+..+..|.+   +.+++
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~------------~~~~~~~~~~~---~~~~~   81 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGE------------LGIAIAYLDLE---ELLAE   81 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh------------cccceeecchh---hcccc
Confidence            4578999998 999999999999996 8899999998766554332111            00122333433   34788


Q ss_pred             cCEEEEccCCCC
Q 044905           82 AGKVVVTIGPTE   93 (427)
Q Consensus        82 ~d~Vi~~ag~~~   93 (427)
                      +|+||+++++..
T Consensus        82 ~Dvvi~~~~~~~   93 (155)
T cd01065          82 ADLIINTTPVGM   93 (155)
T ss_pred             CCEEEeCcCCCC
Confidence            999999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.08  E-value=0.0032  Score=67.69  Aligned_cols=73  Identities=22%  Similarity=0.253  Sum_probs=61.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      .+|+|.|+ |.+|+++++.|.++|++|+++++|+++.+.+.+.+.             .++.||.+|++.+.++ ++++|
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~-------------~~i~GD~~~~~~L~~a~i~~a~  483 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGI-------------RAVLGNAANEEIMQLAHLDCAR  483 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCC-------------eEEEcCCCCHHHHHhcCccccC
Confidence            57999997 999999999999999999999999987777755443             4899999999998865 56899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      .++.+.+.
T Consensus       484 ~viv~~~~  491 (558)
T PRK10669        484 WLLLTIPN  491 (558)
T ss_pred             EEEEEcCC
Confidence            88876653

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.05  E-value=0.0008  Score=57.79  Aligned_cols=93  Identities=24%  Similarity=0.321  Sum_probs=57.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEe-cCcch-----HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLR-EGFSVRAGV-PELGA-----AQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~-~G~~V~al~-R~~~~-----~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |+|+|.|++|..|+.|++.+++ .++++.+.. |+++.     ..++....                 ...+.-.+++..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-----------------~~~~~v~~~l~~   63 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-----------------PLGVPVTDDLEE   63 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-----------------T-SSBEBS-HHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-----------------CcccccchhHHH
Confidence            5899999999999999999999 678866655 55421     11111100                 001111145667


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      ++..+|++|.+..+           ..+...++.|.++|+.-++  .+++
T Consensus        64 ~~~~~DVvIDfT~p-----------~~~~~~~~~~~~~g~~~Vi--GTTG  100 (124)
T PF01113_consen   64 LLEEADVVIDFTNP-----------DAVYDNLEYALKHGVPLVI--GTTG  100 (124)
T ss_dssp             HTTH-SEEEEES-H-----------HHHHHHHHHHHHHT-EEEE--E-SS
T ss_pred             hcccCCEEEEcCCh-----------HHhHHHHHHHHhCCCCEEE--ECCC
Confidence            77779999986532           2667789999999886443  5555

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.03  E-value=0.0029  Score=61.23  Aligned_cols=84  Identities=15%  Similarity=0.183  Sum_probs=52.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +++|+|+|++|.+|+.+++.+.+. +++++++. ++++.....    ..                .++...+++..++.+
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~----~~----------------~~i~~~~dl~~ll~~   60 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ----GA----------------LGVAITDDLEAVLAD   60 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc----CC----------------CCccccCCHHHhccC
Confidence            479999999999999999998875 68888765 444332211    00                111122334445567


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +|+||.+..+.           ....++..|.++|+.
T Consensus        61 ~DvVid~t~p~-----------~~~~~~~~al~~G~~   86 (257)
T PRK00048         61 ADVLIDFTTPE-----------ATLENLEFALEHGKP   86 (257)
T ss_pred             CCEEEECCCHH-----------HHHHHHHHHHHcCCC
Confidence            88888776442           234566666667753

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.02  E-value=0.0029  Score=63.95  Aligned_cols=89  Identities=15%  Similarity=0.176  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ..++|+|.||||++|..|++.|.+++|   ++..+....+.-+.+...+.             +++..++. .    ..+
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~-------------~~~v~~~~-~----~~~   67 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGR-------------DYTVEELT-E----DSF   67 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCc-------------eeEEEeCC-H----HHH
Confidence            356899999999999999999999876   44444433221111111111             23333442 2    235


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .++|+||.+++..           .+..++..+...|+ .+|
T Consensus        68 ~~~D~vf~a~p~~-----------~s~~~~~~~~~~g~-~VI   97 (344)
T PLN02383         68 DGVDIALFSAGGS-----------ISKKFGPIAVDKGA-VVV   97 (344)
T ss_pred             cCCCEEEECCCcH-----------HHHHHHHHHHhCCC-EEE
Confidence            7899999988642           33556666666676 344

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.01  E-value=0.0022  Score=65.84  Aligned_cols=172  Identities=12%  Similarity=0.162  Sum_probs=97.3

Q ss_pred             CCCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE
Q 044905            2 KDSGTVFVAGA----------------TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV   65 (427)
Q Consensus         2 ~~~~kIlItGA----------------TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv   65 (427)
                      +..++|+||||                ||.+|..+++.|..+|++|+++.++.+..  +    ..            .+.
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~--~----~~------------~~~  244 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL--T----PP------------GVK  244 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC--C----CC------------CcE
Confidence            34578999998                47899999999999999999988775421  0    00            145


Q ss_pred             EecCCCHHHH-HHHh----cCcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           66 ESNFDSAESI-AKAI----GNAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        66 ~gDl~D~~sl-~~al----~g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      ..|+++.+.+ ..++    .++|++|++||.....+             ...+++..+-.||...++..-+.++ |+   
T Consensus       245 ~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~~l-vg---  320 (390)
T TIGR00521       245 SIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQVI-VG---  320 (390)
T ss_pred             EEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCcEE-EE---
Confidence            6788888777 4333    46899999999765422             1123333444556555543222222 21   


Q ss_pred             ccccccCCCCCCCCccchhhhhccccccHHHHHHHHhcCCCeEEEEeC-CCCCCCCCCCccceEEecccccCCCCCcccH
Q 044905          128 TTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKT-SLTEDFSPESSYNVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       128 v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRP-G~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v  206 (427)
                        .....+         .+.        .+...+++.+.++++++.-. +.- .|....-..+.+...+.  ...+..+.
T Consensus       321 --F~aEt~---------~~l--------~~~A~~kl~~k~~D~ivaN~i~~~-~fg~~~n~~~li~~~~~--~~~~~~~K  378 (390)
T TIGR00521       321 --FKAETN---------DDL--------IKYAKEKLKKKNLDMIVANDVSQR-GFGSDENEVYIFSKHGH--KELPLMSK  378 (390)
T ss_pred             --EEcCCC---------cHH--------HHHHHHHHHHcCCCEEEEccCCcc-ccCCCCcEEEEEECCCe--EEeCCCCH
Confidence              111100         001        23333555678899888764 210 12111111122322221  12245688


Q ss_pred             HHHHHHHHHHh
Q 044905          207 SQIASLVADVF  217 (427)
Q Consensus       207 ~DVA~~v~~al  217 (427)
                      .++|+.++..+
T Consensus       379 ~~iA~~i~~~~  389 (390)
T TIGR00521       379 LEVAERILDEI  389 (390)
T ss_pred             HHHHHHHHHHh
Confidence            89999887654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.00  E-value=0.013  Score=54.54  Aligned_cols=111  Identities=17%  Similarity=0.132  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------Hh-----hhhhhhhhhhccce--EE
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------AA-----SYKILSKEELKRLN--AV   65 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~~-----~~~~~~~~~~~rl~--vv   65 (427)
                      ....+|+|.|+ |.+|+.+++.|...|. ++++++++.-....|.+.        |.     -...+.. ..+.++  .+
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~-~np~v~i~~~   96 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRE-LNSDIQVTAL   96 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHH-hCCCCEEEEe
Confidence            34568999997 8999999999999996 899998774211111110        00     0000000 012222  33


Q ss_pred             EecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           66 ESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        66 ~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      ...+ +.+.+.+.+.++|+||.+....      .    .-..+-+.|++.+++ +|+.+..
T Consensus        97 ~~~i-~~~~~~~~~~~~D~Vi~~~d~~------~----~r~~l~~~~~~~~ip-~i~~~~~  145 (202)
T TIGR02356        97 KERV-TAENLELLINNVDLVLDCTDNF------A----TRYLINDACVALGTP-LISAAVV  145 (202)
T ss_pred             hhcC-CHHHHHHHHhCCCEEEECCCCH------H----HHHHHHHHHHHcCCC-EEEEEec
Confidence            3344 3456778899999999877431      1    224467888888875 5544433

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.98  E-value=0.0041  Score=67.73  Aligned_cols=89  Identities=15%  Similarity=0.219  Sum_probs=71.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~   82 (427)
                      .++|+|.|. |.+|+.+++.|.++|+++++++.|++..+.+...+.             .++.||.+|++.+.++ ++.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~-------------~v~~GDat~~~~L~~agi~~A  465 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGM-------------KVFYGDATRMDLLESAGAAKA  465 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCC-------------eEEEEeCCCHHHHHhcCCCcC
Confidence            357999997 999999999999999999999999988777755444             3899999999988864 5689


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g  116 (427)
                      +.+|.+...      .+.    ...++..+++..
T Consensus       466 ~~vvv~~~d------~~~----n~~i~~~ar~~~  489 (621)
T PRK03562        466 EVLINAIDD------PQT----SLQLVELVKEHF  489 (621)
T ss_pred             CEEEEEeCC------HHH----HHHHHHHHHHhC
Confidence            999887753      223    355777777664

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.97  E-value=0.0064  Score=60.23  Aligned_cols=109  Identities=17%  Similarity=0.155  Sum_probs=64.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccc-eEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRL-NAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl-~vv~gDl~D~~sl~~al~g   81 (427)
                      |+||.|+|+ |.+|..++..|+..|. +|++++++.+.+........+     ....... ..+.. -+|.    +.+.+
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~-----~~~~~~~~~~i~~-~~d~----~~~~~   70 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAE-----AAPVEGFDTKITG-TNDY----EDIAG   70 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHh-----hhhhcCCCcEEEe-CCCH----HHHCC
Confidence            579999999 9999999999999875 999999987754322110000     0000000 01111 1232    35789


Q ss_pred             cCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||.++|......     ...-|..-...+++.+.+.+-+.++++
T Consensus        71 aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv  117 (307)
T PRK06223         71 SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIV  117 (307)
T ss_pred             CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            999999998643211     112344455566666666655554433

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.95  E-value=0.0063  Score=59.88  Aligned_cols=41  Identities=32%  Similarity=0.256  Sum_probs=36.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE   43 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~   43 (427)
                      +++++|.|.|+ |..|+.++..|+..|++|++++++++.++.
T Consensus         3 ~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~   43 (286)
T PRK07819          3 DAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA   43 (286)
T ss_pred             CCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            45678999998 999999999999999999999999986544

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.93  E-value=0.0036  Score=62.28  Aligned_cols=106  Identities=20%  Similarity=0.169  Sum_probs=68.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |||.|+|++|++|++++..|+.+|  .+++.++.+...  +-+|.....           .. .+.+ ....+++.+.++
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~-----------~~-~i~~-~~~~~~~y~~~~   67 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINT-----------PA-KVTG-YLGPEELKKALK   67 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCC-----------cc-eEEE-ecCCCchHHhcC
Confidence            589999999999999999999888  589988887111  112211100           00 1221 101122556799


Q ss_pred             CcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++|+||.++|.... +.    ....|..-...+++...+.+-.-++++
T Consensus        68 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~viv  115 (310)
T cd01337          68 GADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILI  115 (310)
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            99999999997542 21    345666666777888877775555544

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.93  E-value=0.0072  Score=60.54  Aligned_cols=108  Identities=16%  Similarity=0.055  Sum_probs=68.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCc--chHH----HHHHHHhhhhhhhhhhhccceEEEec
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPEL--GAAQ----ELARLAASYKILSKEELKRLNAVESN   68 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~--~~~~----~l~~~~~~~~~~~~~~~~rl~vv~gD   68 (427)
                      +++.||.|+||+|++|+.++..|+..|.       +++.++.+.  +++.    ++......      . ..+..+. + 
T Consensus         1 ~~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~------~-~~~~~i~-~-   71 (323)
T TIGR01759         1 KKPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP------L-LAGVVAT-T-   71 (323)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc------c-cCCcEEe-c-
Confidence            3567999999999999999999999883       799998854  2221    22111100      0 0111111 1 


Q ss_pred             CCCHHHHHHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCC-CeEEEE
Q 044905           69 FDSAESIAKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGV-GHVAII  123 (427)
Q Consensus        69 l~D~~sl~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gV-k~~V~v  123 (427)
                           .....++++|+||.++|.... +.    ....|..-...+...+.+.+- .-++.+
T Consensus        72 -----~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiiv  127 (323)
T TIGR01759        72 -----DPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLV  127 (323)
T ss_pred             -----ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence                 124568999999999997542 11    345566667777888887765 444433

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.93  E-value=0.0056  Score=60.78  Aligned_cols=108  Identities=16%  Similarity=0.111  Sum_probs=68.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ++|.|+|+ |.+|+.++..|+..|  ++|++++|+.+++..+.....+...   .......+. .  .+.    ..+.++
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~---~~~~~~~i~-~--~~~----~~l~~a   69 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALA---FLPSPVKIK-A--GDY----SDCKDA   69 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhh---ccCCCeEEE-c--CCH----HHhCCC
Confidence            48999997 999999999999999  6899999998865444321111000   000011122 1  232    246899


Q ss_pred             CEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||+++|......     ....|..-...+.+.+.+++-..++++
T Consensus        70 DIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~viv  115 (306)
T cd05291          70 DIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLV  115 (306)
T ss_pred             CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            99999999754311     334555556677777777765555444

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.90  E-value=0.014  Score=58.85  Aligned_cols=104  Identities=14%  Similarity=0.146  Sum_probs=67.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc---------------------hHHHHHHHHhhhhhhhhh-h
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG---------------------AAQELARLAASYKILSKE-E   58 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~---------------------~~~~l~~~~~~~~~~~~~-~   58 (427)
                      ...++|+|.|+ |.+|++++..|.+.|+ ++++++++.-                     ++..+...      +... .
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~------l~~inp   94 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEH------LRKINS   94 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHH------HHHHCC
Confidence            34568999998 8899999999999997 8888888741                     11111110      0000 0


Q ss_pred             hccceEEEecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           59 LKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        59 ~~rl~vv~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .-+++.+..|++ .+.+.+++.++|+||.+...      .+..    ..+-++|.+.|++ +|+.+
T Consensus        95 ~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~------~~~r----~~in~~~~~~~ip-~i~~~  148 (338)
T PRK12475         95 EVEIVPVVTDVT-VEELEELVKEVDLIIDATDN------FDTR----LLINDLSQKYNIP-WIYGG  148 (338)
T ss_pred             CcEEEEEeccCC-HHHHHHHhcCCCEEEEcCCC------HHHH----HHHHHHHHHcCCC-EEEEE
Confidence            123445666764 45678889999999987742      2222    3466888888876 44443

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.89  E-value=0.0048  Score=60.60  Aligned_cols=42  Identities=33%  Similarity=0.253  Sum_probs=36.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQEL   44 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l   44 (427)
                      |+.++|.|+|+ |.+|+.++..|+..|++|++++++++..+..
T Consensus         1 ~~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~   42 (287)
T PRK08293          1 MDIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKA   42 (287)
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence            45679999997 9999999999999999999999998765443

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.89  E-value=0.0066  Score=60.69  Aligned_cols=80  Identities=21%  Similarity=0.211  Sum_probs=52.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHH-------hhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLA-------ASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~-------~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      +.++|.|.|+ |-+|+.++..|+..|++|++.+++++..+......       .+..+.......++.+       ..++
T Consensus         6 ~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~-------~~~l   77 (321)
T PRK07066          6 DIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF-------VATI   77 (321)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee-------cCCH
Confidence            4578999997 99999999999999999999999987544322110       0000000000112221       2246


Q ss_pred             HHHhcCcCEEEEccC
Q 044905           76 AKAIGNAGKVVVTIG   90 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag   90 (427)
                      ..++.+||.||-++.
T Consensus        78 ~~av~~aDlViEavp   92 (321)
T PRK07066         78 EACVADADFIQESAP   92 (321)
T ss_pred             HHHhcCCCEEEECCc
Confidence            678899999999874

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.88  E-value=0.003  Score=65.90  Aligned_cols=67  Identities=24%  Similarity=0.306  Sum_probs=49.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |+|+|+||+|.+|..++..|.+.|++|++++|++.....+.. .+..              +      ......++.++|
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~--------------~------~~~~~e~~~~aD   60 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE--------------Y------ANDNIDAAKDAD   60 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe--------------e------ccCHHHHhccCC
Confidence            589999999999999999999999999999998765433322 1111              1      112345678899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.++.+
T Consensus        61 vVIlavp~   68 (437)
T PRK08655         61 IVIISVPI   68 (437)
T ss_pred             EEEEecCH
Confidence            99998764

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.86  E-value=0.015  Score=58.76  Aligned_cols=113  Identities=23%  Similarity=0.202  Sum_probs=69.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------H-------hhhhhhhhhh-hccceE
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------A-------ASYKILSKEE-LKRLNA   64 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~-------~~~~~~~~~~-~~rl~v   64 (427)
                      ....+|+|.|+ |.+|+.++..|.+.|. +|++++++.-....|.+.        +       .-...++..+ .-+++.
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34578999998 9999999999999997 899999874211111100        0       0000000000 113445


Q ss_pred             EEecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           65 VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        65 v~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      +..+++ .+.+...+.++|+||.+...      ..    .-..+.++|.+.+++ +|+.++.+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~Dn------~~----~r~~ln~~~~~~~iP-~i~~~~~g  151 (339)
T PRK07688        101 IVQDVT-AEELEELVTGVDLIIDATDN------FE----TRFIVNDAAQKYGIP-WIYGACVG  151 (339)
T ss_pred             EeccCC-HHHHHHHHcCCCEEEEcCCC------HH----HHHHHHHHHHHhCCC-EEEEeeee
Confidence            555664 45667789999999987642      22    224577889999875 45444333

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.82  E-value=0.014  Score=58.09  Aligned_cols=110  Identities=18%  Similarity=0.113  Sum_probs=67.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+||.|+|+ |++|+.++..|+..|  .+++.++.+.+.+....-...+   ..+. .....+...  .|.+    .+.
T Consensus         2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~---~~~~-~~~~~v~~~--~dy~----~~~   70 (312)
T cd05293           2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQH---GSAF-LKNPKIEAD--KDYS----VTA   70 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHH---hhcc-CCCCEEEEC--CCHH----HhC
Confidence            5679999997 999999999999888  4799999887644222110000   0000 011122221  2322    489


Q ss_pred             CcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++|+||.++|.... +.    .+..|..-...+.+.+.+.+-+-++++
T Consensus        71 ~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~viv  118 (312)
T cd05293          71 NSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLV  118 (312)
T ss_pred             CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            99999999997553 11    234555556667777777765555544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.82  E-value=0.0075  Score=61.57  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ..+|+|+|+ |-+|..+++.|...|.+|++++|++.+++.+......             .+..+..+.+.+.+.+.++|
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~-------------~v~~~~~~~~~l~~~l~~aD  232 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG-------------RIHTRYSNAYEIEDAVKRAD  232 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc-------------eeEeccCCHHHHHHHHccCC
Confidence            457999998 9999999999999999999999998766555332211             23445667888899999999


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||++++.
T Consensus       233 vVI~a~~~  240 (370)
T TIGR00518       233 LLIGAVLI  240 (370)
T ss_pred             EEEEcccc
Confidence            99998854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.81  E-value=0.0034  Score=50.75  Aligned_cols=68  Identities=26%  Similarity=0.329  Sum_probs=48.4

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC---CeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG---FSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G---~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ||.|+|+ |.+|++|++.|++.|   ++|..+ .|++++..++......            .+...|      ..++++.
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~------------~~~~~~------~~~~~~~   61 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGV------------QATADD------NEEAAQE   61 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTT------------EEESEE------HHHHHHH
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcc------------ccccCC------hHHhhcc
Confidence            6888875 999999999999999   999955 8999887777543221            122212      2456678


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||.+.-+.
T Consensus        62 advvilav~p~   72 (96)
T PF03807_consen   62 ADVVILAVKPQ   72 (96)
T ss_dssp             TSEEEE-S-GG
T ss_pred             CCEEEEEECHH
Confidence            99999988763

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.81  E-value=0.0038  Score=58.14  Aligned_cols=70  Identities=24%  Similarity=0.170  Sum_probs=46.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ||+|+|.| ||.+|+.|++.|.+.||+|+...|+.++...........           .+.      ..+...+.+.+|
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~-----------~i~------~~~~~dA~~~aD   62 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP-----------LIT------GGSNEDAAALAD   62 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc-----------ccc------cCChHHHHhcCC
Confidence            55666666 699999999999999999999976665432222211110           011      123456788999


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.++..
T Consensus        63 VVvLAVP~   70 (211)
T COG2085          63 VVVLAVPF   70 (211)
T ss_pred             EEEEeccH
Confidence            99987754

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.80  E-value=0.0066  Score=58.88  Aligned_cols=109  Identities=15%  Similarity=0.096  Sum_probs=68.2

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            7 VFVAGATGQAGVRIAQTLLREG----FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |.|+||+|.+|..++..|+..|    .+|+.++++..++........+.  . .. ....++. .    .+++.+++.++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~--~-~~-~~~~~i~-~----~~d~~~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDA--V-EP-LADIKVS-I----TDDPYEAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHh--h-hh-ccCcEEE-E----CCchHHHhCCC
Confidence            5799999999999999999999    79999999886543322111110  0 00 0011121 1    11245679999


Q ss_pred             CEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |+||.+++.... +.    ....|......+.+.+.+.+-.-++++.
T Consensus        72 DiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~  118 (263)
T cd00650          72 DVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVV  118 (263)
T ss_pred             CEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            999999986543 11    2344555566777777777655455444

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.80  E-value=0.011  Score=58.36  Aligned_cols=69  Identities=13%  Similarity=0.186  Sum_probs=54.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+|. |..|..+++.|++.|++|++..|++++.+.+...+..                 ...+.+.+...+..+|+
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~-----------------~~~s~~~~~~~~~~~dv   62 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTT-----------------GVANLRELSQRLSAPRV   62 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc-----------------ccCCHHHHHhhcCCCCE
Confidence            47999996 9999999999999999999999999877766543321                 12355666666778899


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.+...
T Consensus        63 Ii~~vp~   69 (298)
T TIGR00872        63 VWVMVPH   69 (298)
T ss_pred             EEEEcCc
Confidence            9988754

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.77  E-value=0.0049  Score=55.02  Aligned_cols=78  Identities=19%  Similarity=0.294  Sum_probs=51.5

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhh-ccceEEEecCCCHHHHHHHhcCcCE
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEEL-KRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~-~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      ||.|.|| |..|++++..|..+|++|+...|+.+..+.+.........+..... .++. +.   +   ++.++++++|+
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~-~t---~---dl~~a~~~ad~   72 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIK-AT---T---DLEEALEDADI   72 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEE-EE---S---SHHHHHTT-SE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccc-cc---c---CHHHHhCcccE
Confidence            6899998 9999999999999999999999998776666554332111111100 1111 11   2   34678899999


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.+...
T Consensus        73 IiiavPs   79 (157)
T PF01210_consen   73 IIIAVPS   79 (157)
T ss_dssp             EEE-S-G
T ss_pred             EEecccH
Confidence            9987754

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK08057 cobalt-precorrin-6x reductase; Reviewed

Probab=96.77  E-value=0.0095  Score=57.39  Aligned_cols=97  Identities=14%  Similarity=0.140  Sum_probs=74.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +|++|+|+|||+ =|+.|++.|.+.|+.|++.+-.....  ...             ..+.+..|-+.|.+.|.+.++  
T Consensus         1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~--~~~-------------~~~~v~~G~l~~~~~l~~~l~~~   64 (248)
T PRK08057          1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG--PAD-------------LPGPVRVGGFGGAEGLAAYLREE   64 (248)
T ss_pred             CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC--ccc-------------CCceEEECCCCCHHHHHHHHHHC
Confidence            367899999998 58999999999999888877665432  111             123478899989999999996  


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +++.||.+.=|      +...  -+.++.++|++.|++.+-|.
T Consensus        65 ~i~~VIDATHP------fA~~--is~~a~~ac~~~~ipyiR~e   99 (248)
T PRK08057         65 GIDLVIDATHP------YAAQ--ISANAAAACRALGIPYLRLE   99 (248)
T ss_pred             CCCEEEECCCc------cHHH--HHHHHHHHHHHhCCcEEEEe
Confidence            68999986644      2222  55889999999999887755

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.75  E-value=0.018  Score=58.50  Aligned_cols=114  Identities=18%  Similarity=0.135  Sum_probs=73.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH-------HhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL-------AASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~-------~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |+|.|+| |||+|.-..--|.+.||+|++++.++++.+.|...       +.+..+.+.....||.+       ..+...
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f-------Ttd~~~   72 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF-------TTDYEE   72 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE-------EcCHHH
Confidence            6899999 59999999999999999999999999887766431       11100000111111222       223567


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC-eEEEEeccc
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGN  127 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~  127 (427)
                      +++++|++|.+.|..+.. .-..++.....+++....+.-+ ++|++=|+.
T Consensus        73 a~~~adv~fIavgTP~~~-dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTV  122 (414)
T COG1004          73 AVKDADVVFIAVGTPPDE-DGSADLSYVEAVAKDIGEILDGKAVVVIKSTV  122 (414)
T ss_pred             HHhcCCEEEEEcCCCCCC-CCCccHHHHHHHHHHHHhhcCCCeEEEEcCCC
Confidence            899999999999976543 3344444555555555444433 777775554

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.75  E-value=0.0078  Score=59.99  Aligned_cols=105  Identities=18%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ||.|+|++|.+|++++..|+..|.  +++.+++++..  +-+|....           ....+....  +.+++.+.+.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~-----------~~~~i~~~~--~~~~~~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIP-----------TAASVKGFS--GEEGLENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCC-----------cCceEEEec--CCCchHHHcCC
Confidence            689999999999999999998884  78988887621  11221100           001122101  11224568999


Q ss_pred             cCEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||.++|.... +    .....|..-...+.....+.+-..++++
T Consensus        68 aDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiiv  114 (312)
T TIGR01772        68 ADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILV  114 (312)
T ss_pred             CCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEE
Confidence            9999999997542 1    1445666667777888877775555544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.73  E-value=0.0085  Score=60.01  Aligned_cols=106  Identities=15%  Similarity=0.051  Sum_probs=66.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCcch--H----HHHHHHHhhhhhhhhhhhccceEEEecCC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPELGA--A----QELARLAASYKILSKEELKRLNAVESNFD   70 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~~~--~----~~l~~~~~~~~~~~~~~~~rl~vv~gDl~   70 (427)
                      ++||.|+||+|++|..++..|+..|.       +++.++.+...  +    -++.....-      . ..++.+. .  .
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~------~-~~~~~i~-~--~   71 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFP------L-LAEIVIT-D--D   71 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccc------c-cCceEEe-c--C
Confidence            56999999999999999999998884       79999884431  2    122211100      0 0111221 1  1


Q ss_pred             CHHHHHHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCC-CeEEEE
Q 044905           71 SAESIAKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGV-GHVAII  123 (427)
Q Consensus        71 D~~sl~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gV-k~~V~v  123 (427)
                      |    ...+.++|+||.++|.... +.    .+..|..-...+.....+++- ..++++
T Consensus        72 ~----~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiiv  126 (322)
T cd01338          72 P----NVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLV  126 (322)
T ss_pred             c----HHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence            2    4678999999999997543 11    345566666777778777763 444444

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=96.71  E-value=0.00085  Score=61.77  Aligned_cols=113  Identities=20%  Similarity=0.220  Sum_probs=56.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh---hh---hhhhh-hhccceEEEecCCCHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS---YK---ILSKE-ELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~---~~---~~~~~-~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |+|.|.|. |++|..++..|.+.||+|++++.++.+...+......   ..   ++... ...||.+.       ..+..
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t-------~~~~~   72 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRAT-------TDIEE   72 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEE-------SEHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhh-------hhhhh
Confidence            78999985 9999999999999999999999998876655421110   00   00000 01122111       12345


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEEEEecc
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDG  126 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs  126 (427)
                      ++..+|++|.|.+..... ....+.......++..... .-.++|.+-|+
T Consensus        73 ai~~adv~~I~VpTP~~~-~~~~Dls~v~~a~~~i~~~l~~~~lvV~~ST  121 (185)
T PF03721_consen   73 AIKDADVVFICVPTPSDE-DGSPDLSYVESAIESIAPVLRPGDLVVIEST  121 (185)
T ss_dssp             HHHH-SEEEE----EBET-TTSBETHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred             hhhccceEEEecCCCccc-cCCccHHHHHHHHHHHHHHHhhcceEEEccE
Confidence            577799999999854332 1222322334444444332 22355555444

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.71  E-value=0.01  Score=58.32  Aligned_cols=83  Identities=17%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH-------HhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL-------AASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~-------~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      ++|.|+|+ |.+|..++..|+++|++|++++++++..+.+...       +.+...++..+..   .+...+.-..++.+
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~i~~~~~~~~   77 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQ---AALARLSYSLDLKA   77 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH---HHHhCeEEeCcHHH
Confidence            58999998 9999999999999999999999998876554321       1110000000000   00000111123556


Q ss_pred             HhcCcCEEEEccCC
Q 044905           78 AIGNAGKVVVTIGP   91 (427)
Q Consensus        78 al~g~d~Vi~~ag~   91 (427)
                      +++++|+||.++..
T Consensus        78 ~~~~aD~Vi~avpe   91 (288)
T PRK09260         78 AVADADLVIEAVPE   91 (288)
T ss_pred             hhcCCCEEEEeccC
Confidence            78999999998763

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.70  E-value=0.01  Score=59.31  Aligned_cols=111  Identities=17%  Similarity=0.098  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.+||.|+|| |.+|+.++..|+..| .+|+.++++.+.+....-....   ......... .+.+ ..|   +. ++.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~---~~~~~~~~~-~i~~-~~d---~~-~l~~   73 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKH---FSTLVGSNI-NILG-TNN---YE-DIKD   73 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhh---hccccCCCe-EEEe-CCC---HH-HhCC
Confidence            4569999998 999999999999999 7899999987643211100000   000000011 1221 123   23 6899


Q ss_pred             cCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||.++|......     ....|..-...+.+.+.+.+-+.++.+
T Consensus        74 ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~viv  120 (319)
T PTZ00117         74 SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVIC  120 (319)
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            999999998654321     233444455667777777765554433

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.68  E-value=0.0085  Score=61.56  Aligned_cols=83  Identities=17%  Similarity=0.189  Sum_probs=49.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccc-eEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRL-NAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl-~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |+|.|.|. |++|..++.. ++.||+|+++++++++.+.+... ..+ +..+. ..++ .-..+.++...+...+..++|
T Consensus         1 mkI~VIGl-GyvGl~~A~~-lA~G~~VigvD~d~~kv~~l~~g-~~~-~~e~~-l~~~l~~~~~~l~~t~~~~~~~~~ad   75 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLL-IAQNHEVVALDILPSRVAMLNDR-ISP-IVDKE-IQQFLQSDKIHFNATLDKNEAYRDAD   75 (388)
T ss_pred             CEEEEECC-CHHHHHHHHH-HHhCCcEEEEECCHHHHHHHHcC-CCC-CCCcC-HHHHHHhCCCcEEEecchhhhhcCCC
Confidence            47999986 9999999954 45699999999999887766431 110 00000 0000 000111111112334568899


Q ss_pred             EEEEccCCC
Q 044905           84 KVVVTIGPT   92 (427)
Q Consensus        84 ~Vi~~ag~~   92 (427)
                      +||.+.+..
T Consensus        76 ~vii~Vpt~   84 (388)
T PRK15057         76 YVIIATPTD   84 (388)
T ss_pred             EEEEeCCCC
Confidence            999998754

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.67  E-value=0.0097  Score=58.94  Aligned_cols=76  Identities=21%  Similarity=0.169  Sum_probs=53.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC-CCHHHHHHHh--c
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF-DSAESIAKAI--G   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl-~D~~sl~~al--~   80 (427)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+...+.+.            ++..+- .+.......+  +
T Consensus       139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~------------vi~~~~~~~~~~~~~~~~~~  206 (325)
T TIGR02825       139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDV------------AFNYKTVKSLEETLKKASPD  206 (325)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE------------EEeccccccHHHHHHHhCCC
Confidence            458999999999999999999999999999999987777666655541            222111 1222222222  3


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.+.|.
T Consensus       207 gvdvv~d~~G~  217 (325)
T TIGR02825       207 GYDCYFDNVGG  217 (325)
T ss_pred             CeEEEEECCCH
Confidence            68999998874

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.66  E-value=0.015  Score=57.34  Aligned_cols=44  Identities=23%  Similarity=0.304  Sum_probs=37.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLA   48 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~   48 (427)
                      |++|.|+|. |.+|..++..|++.|++|++..|++++.+.+...+
T Consensus         1 m~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g   44 (296)
T PRK15461          1 MAAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG   44 (296)
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC
Confidence            358999996 99999999999999999999999988777665443

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.63  E-value=0.0071  Score=62.55  Aligned_cols=83  Identities=19%  Similarity=0.238  Sum_probs=52.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhh----hhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKE----ELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~----~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+|.|.|. |++|..++..|.+.||+|+++++++.+.+.+.. +..+ +..+.    -...+.  .+.++-..++..+++
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~-g~~~-~~e~~l~~~~~~~~~--~g~l~~~~~~~~~~~   75 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNK-GKSP-IYEPGLDELLAKALA--AGRLRATTDYEDAIR   75 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhc-CCCC-CCCCCHHHHHHHhhh--cCCeEEECCHHHHHh
Confidence            47999996 999999999999999999999999887766542 1100 00000    000000  010111113345678


Q ss_pred             CcCEEEEccCCC
Q 044905           81 NAGKVVVTIGPT   92 (427)
Q Consensus        81 g~d~Vi~~ag~~   92 (427)
                      ++|+||.+++..
T Consensus        76 ~advvii~vpt~   87 (411)
T TIGR03026        76 DADVIIICVPTP   87 (411)
T ss_pred             hCCEEEEEeCCC
Confidence            899999998854

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.62  E-value=0.0056  Score=59.92  Aligned_cols=74  Identities=18%  Similarity=0.283  Sum_probs=52.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++++|+|+ |.+|+.++..|...| .+|+++.|+.++++.+.......           ..+..++    .+...+.+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~-----------~~~~~~~----~~~~~~~~  185 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL-----------GKAELDL----ELQEELAD  185 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc-----------cceeecc----cchhcccc
Confidence            3468999997 999999999999999 79999999988776664432110           0011111    12355678


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||++....
T Consensus       186 ~DivInaTp~g  196 (278)
T PRK00258        186 FDLIINATSAG  196 (278)
T ss_pred             CCEEEECCcCC
Confidence            99999987643

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.61  E-value=0.0073  Score=60.22  Aligned_cols=100  Identities=14%  Similarity=0.120  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +|++|+|.||||+.|..|++.|..+. .++...+.+..+-+.+.....+..        .+.-.....-|.+.+  ...+
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~--------g~~~l~~~~~~~~~~--~~~~   70 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLR--------GLVDLPFQTIDPEKI--ELDE   70 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccc--------cccccccccCChhhh--hccc
Confidence            47799999999999999999999986 687776655422222222111100        000011112233333  4667


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ||+||.+....           .+..++......|++ +|=+|
T Consensus        71 ~DvvFlalPhg-----------~s~~~v~~l~~~g~~-VIDLS  101 (349)
T COG0002          71 CDVVFLALPHG-----------VSAELVPELLEAGCK-VIDLS  101 (349)
T ss_pred             CCEEEEecCch-----------hHHHHHHHHHhCCCe-EEECC
Confidence            99999877542           234566666666765 55444

>PLN02602 lactate dehydrogenase

Probab=96.61  E-value=0.025  Score=57.34  Aligned_cols=105  Identities=20%  Similarity=0.186  Sum_probs=66.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +||.|+|+ |.+|+.++..|+..|  .++..++.+.+++..    |.....-        .... .+.++ .|    .+.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~--------~~~~-~i~~~-~d----y~~  102 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAF--------LPRT-KILAS-TD----YAV  102 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhc--------CCCC-EEEeC-CC----HHH
Confidence            69999997 999999999999988  479999988765422    2111100        1111 22221 23    234


Q ss_pred             hcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           79 IGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++++|+||.++|.... +.    ....|..-...+.+.+.+++-+-++++.
T Consensus       103 ~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivv  153 (350)
T PLN02602        103 TAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIV  153 (350)
T ss_pred             hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            8999999999997543 11    2344444555677777777655555443

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.61  E-value=0.017  Score=57.49  Aligned_cols=107  Identities=18%  Similarity=0.099  Sum_probs=66.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHH-HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQE-LARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~-l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |+|.|.|+ |.+|..++..|+.+|  .+|.+++++..++.. ..... ....   . .....+..   .|.    ..+.+
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~-~~~~---~-~~~~~i~~---~d~----~~l~~   67 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLA-HGTP---F-VKPVRIYA---GDY----ADCKG   67 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHH-cccc---c-cCCeEEee---CCH----HHhCC
Confidence            58999998 999999999999999  689999998865432 11111 0000   0 01112222   232    35899


Q ss_pred             cCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+||.+++......     ....|......+++.+.+.+-+-++++.
T Consensus        68 aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~  115 (308)
T cd05292          68 ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV  115 (308)
T ss_pred             CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            999999998754321     1233544555667776766655555443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.59  E-value=0.013  Score=58.34  Aligned_cols=76  Identities=18%  Similarity=0.168  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEec-CCCH-HHHHHHh-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESN-FDSA-ESIAKAI-   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gD-l~D~-~sl~~al-   79 (427)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+.. .|.+.            ++..+ -.+. +.+.+.. 
T Consensus       152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~------------vi~~~~~~~~~~~i~~~~~  219 (338)
T cd08295         152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD------------AFNYKEEPDLDAALKRYFP  219 (338)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce------------eEEcCCcccHHHHHHHhCC
Confidence            4689999999999999999999999999999999887666655 55541            22211 1121 2233322 


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.+.|.
T Consensus       220 ~gvd~v~d~~g~  231 (338)
T cd08295         220 NGIDIYFDNVGG  231 (338)
T ss_pred             CCcEEEEECCCH
Confidence            368999998773

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK05442 malate dehydrogenase; Provisional

Probab=96.59  E-value=0.013  Score=58.73  Aligned_cols=101  Identities=18%  Similarity=0.057  Sum_probs=64.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCcc--hH----HHHHHHHhhhhhhhhhhhccceEEEec
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPELG--AA----QELARLAASYKILSKEELKRLNAVESN   68 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~~--~~----~~l~~~~~~~~~~~~~~~~rl~vv~gD   68 (427)
                      +.++||.|+||+|++|+.++..|+..|.       ++..++.+..  ++    -+|.....-      . ..++.+. . 
T Consensus         2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~------~-~~~~~i~-~-   72 (326)
T PRK05442          2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFP------L-LAGVVIT-D-   72 (326)
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhh------h-cCCcEEe-c-
Confidence            4577999999999999999999998772       7999988543  22    222221100      0 0111222 1 


Q ss_pred             CCCHHHHHHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcC
Q 044905           69 FDSAESIAKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        69 l~D~~sl~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~g  116 (427)
                           ...+.++++|+||.++|.... +.    ....|..-...+.....++.
T Consensus        73 -----~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~  120 (326)
T PRK05442         73 -----DPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVA  120 (326)
T ss_pred             -----ChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence                 124568999999999996432 21    34556666677777777744

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.59  E-value=0.022  Score=57.16  Aligned_cols=74  Identities=28%  Similarity=0.302  Sum_probs=55.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~al~   80 (427)
                      ..+|||+||||.+|+..++.+.+.|+.+++.+.+..+.+.+...+...              ..|+.+   .+.+.+...
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~--------------vi~y~~~~~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADH--------------VINYREEDFVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCE--------------EEcCCcccHHHHHHHHcC
Confidence            468999999999999999999999987777777777666677777652              223444   234444454


Q ss_pred             --CcCEEEEccCC
Q 044905           81 --NAGKVVVTIGP   91 (427)
Q Consensus        81 --g~d~Vi~~ag~   91 (427)
                        ++|+|+.+.|.
T Consensus       209 g~gvDvv~D~vG~  221 (326)
T COG0604         209 GKGVDVVLDTVGG  221 (326)
T ss_pred             CCCceEEEECCCH
Confidence              59999999885

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.57  E-value=0.0038  Score=61.97  Aligned_cols=81  Identities=22%  Similarity=0.300  Sum_probs=52.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ||+|.|.|+ |.+|+.++..|++.|++|+++.|++...+.+...+......     ..+.. ...+.-..++.++++++|
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~~~~~D   73 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYL-----PGIKL-PDNLRATTDLAEALADAD   73 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccC-----CCCcC-CCCeEEeCCHHHHHhCCC
Confidence            578999997 99999999999999999999999987666654432110000     00000 000111123345678899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+...
T Consensus        74 ~vi~~v~~   81 (325)
T PRK00094         74 LILVAVPS   81 (325)
T ss_pred             EEEEeCCH
Confidence            99998864

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.53  E-value=0.0034  Score=54.19  Aligned_cols=43  Identities=26%  Similarity=0.323  Sum_probs=32.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELA   45 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~   45 (427)
                      ...++|.|+|+ |.+|.+|.+.|.+.||+|.++. |+....+.+.
T Consensus         8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~   51 (127)
T PF10727_consen    8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAA   51 (127)
T ss_dssp             ----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHH
T ss_pred             CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccc
Confidence            34678999998 9999999999999999999875 6654444443

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.53  E-value=0.0092  Score=58.79  Aligned_cols=68  Identities=21%  Similarity=0.284  Sum_probs=51.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|+|+|. |.+|+.+++.|...|++|++..|++.+.......+..               .   .+.+.+.+.+.++|
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~---------------~---~~~~~l~~~l~~aD  211 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLI---------------P---FPLNKLEEKVAEID  211 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe---------------e---ecHHHHHHHhccCC
Confidence            468999998 9999999999999999999999997654433221111               1   12345677889999


Q ss_pred             EEEEccC
Q 044905           84 KVVVTIG   90 (427)
Q Consensus        84 ~Vi~~ag   90 (427)
                      +||++..
T Consensus       212 iVint~P  218 (287)
T TIGR02853       212 IVINTIP  218 (287)
T ss_pred             EEEECCC
Confidence            9999874

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.50  E-value=0.014  Score=61.40  Aligned_cols=120  Identities=9%  Similarity=0.023  Sum_probs=67.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccc-eEEEe-cCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRL-NAVES-NFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl-~vv~g-Dl~D~~sl~~al   79 (427)
                      ||+|.|.|+ |++|..++-.|...|  ++|++++.++.+...+.......  ..+. ...+ .-..+ .+.=..++..++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~--~e~g-l~ell~~~~~~~l~~t~~~~~~i   76 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPI--YEPG-LDEVVKQCRGKNLFFSTDVEKHV   76 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCcc--CCCC-HHHHHHHhhcCCEEEEcCHHHHH
Confidence            578999986 999999999999885  88999999998877664322110  0000 0000 00001 011112235578


Q ss_pred             cCcCEEEEccCCCCCCC----CccccHHHHHHHHHHHHHc-CCCeEEEEeccc
Q 044905           80 GNAGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGN  127 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~  127 (427)
                      .++|++|.|++......    ....++......++..... .-..+|++.|+.
T Consensus        77 ~~advi~I~V~TP~~~~g~~~~~~~Dls~v~~a~~~i~~~l~~~~lVv~~STv  129 (473)
T PLN02353         77 AEADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTV  129 (473)
T ss_pred             hcCCEEEEEeCCCCCCCCCcCCCCCcHHHHHHHHHHHHhhCCCCcEEEEeCCC
Confidence            89999999998543210    1234444444444444332 223456565554

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.49  E-value=0.022  Score=57.05  Aligned_cols=94  Identities=19%  Similarity=0.176  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +..+|+|+|+ |.+|..-++.+.+.|.+|++++|++++.+.....|.++            ++...  |.+.+...-+.+
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~------------~i~~~--~~~~~~~~~~~~  230 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADH------------VINSS--DSDALEAVKEIA  230 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcE------------EEEcC--CchhhHHhHhhC
Confidence            4568999999 58999999999999999999999999988788888762            33333  655555555559


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |++|.+++ ..          .....+++++..|  +++.+.
T Consensus       231 d~ii~tv~-~~----------~~~~~l~~l~~~G--~~v~vG  259 (339)
T COG1064         231 DAIIDTVG-PA----------TLEPSLKALRRGG--TLVLVG  259 (339)
T ss_pred             cEEEECCC-hh----------hHHHHHHHHhcCC--EEEEEC
Confidence            99999987 21          2233555565554  555553

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.49  E-value=0.062  Score=46.47  Aligned_cols=106  Identities=14%  Similarity=0.177  Sum_probs=66.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc-------------------hHHHHHHHHhhhhhhhhhhhccce
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG-------------------AAQELARLAASYKILSKEELKRLN   63 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~-------------------~~~~l~~~~~~~~~~~~~~~~rl~   63 (427)
                      .++|+|.|+ |.+|+.++..|...|. +++.++.+.=                   +...+.....+     -...-++.
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~-----~np~~~v~   75 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQE-----INPDVEVE   75 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHH-----HSTTSEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHH-----hcCceeee
Confidence            358999998 8899999999999996 7888874431                   11111111000     00112344


Q ss_pred             EEEecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           64 AVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        64 vv~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      .+..++ +.+.+...++++|+||.+...      ..    .-..+.+.|+..+. .++..+..+
T Consensus        76 ~~~~~~-~~~~~~~~~~~~d~vi~~~d~------~~----~~~~l~~~~~~~~~-p~i~~~~~g  127 (135)
T PF00899_consen   76 AIPEKI-DEENIEELLKDYDIVIDCVDS------LA----ARLLLNEICREYGI-PFIDAGVNG  127 (135)
T ss_dssp             EEESHC-SHHHHHHHHHTSSEEEEESSS------HH----HHHHHHHHHHHTT--EEEEEEEET
T ss_pred             eeeccc-ccccccccccCCCEEEEecCC------HH----HHHHHHHHHHHcCC-CEEEEEeec
Confidence            555666 556678888999999998753      11    23457788998887 465444333

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.48  E-value=0.011  Score=57.91  Aligned_cols=67  Identities=10%  Similarity=0.098  Sum_probs=48.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|.| .|.+|..++..|.+.|++|++++|+++..+.+...+..               .....+.    ..+.++|+
T Consensus         1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~---------------~~~~~~~----~~~~~aDl   60 (279)
T PRK07417          1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV---------------DEASTDL----SLLKDCDL   60 (279)
T ss_pred             CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc---------------ccccCCH----hHhcCCCE
Confidence            4799999 59999999999999999999999998765555432211               0011122    24678999


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.++.+
T Consensus        61 Vilavp~   67 (279)
T PRK07417         61 VILALPI   67 (279)
T ss_pred             EEEcCCH
Confidence            9988764

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.48  E-value=0.011  Score=58.61  Aligned_cols=69  Identities=23%  Similarity=0.376  Sum_probs=52.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++++|+|+ |.+|+.++..|.+.|++|+++.|++.+.......+.+             .+     +.+.+.+.+.++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~-------------~~-----~~~~l~~~l~~a  211 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLS-------------PF-----HLSELAEEVGKI  211 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCe-------------ee-----cHHHHHHHhCCC
Confidence            3579999997 8999999999999999999999997654444332222             11     234567788999


Q ss_pred             CEEEEccC
Q 044905           83 GKVVVTIG   90 (427)
Q Consensus        83 d~Vi~~ag   90 (427)
                      |+||++++
T Consensus       212 DiVI~t~p  219 (296)
T PRK08306        212 DIIFNTIP  219 (296)
T ss_pred             CEEEECCC
Confidence            99999864

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.45  E-value=0.01  Score=61.58  Aligned_cols=72  Identities=22%  Similarity=0.328  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+|+|+ |.+|..+++.|...| .+|+++.|+..++..+.....              .   ...+.+++.+++.+
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g--------------~---~~i~~~~l~~~l~~  240 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG--------------G---EAVKFEDLEEYLAE  240 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--------------C---eEeeHHHHHHHHhh
Confidence            4568999997 999999999999999 789999999876655533210              0   11123467778889


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||.+.+..
T Consensus       241 aDvVi~aT~s~  251 (417)
T TIGR01035       241 ADIVISSTGAP  251 (417)
T ss_pred             CCEEEECCCCC
Confidence            99999987643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.44  E-value=0.0056  Score=61.25  Aligned_cols=82  Identities=22%  Similarity=0.188  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ++|+|.|.|+ |.+|+.++..|++.|++|+++.|++++.+.+.........+     ..... ...+.-..++.++++++
T Consensus         3 ~~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~-----~g~~~-~~~~~~~~~~~e~~~~a   75 (328)
T PRK14618          3 HGMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYL-----PGVAL-PAELYPTADPEEALAGA   75 (328)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccC-----CCCcC-CCCeEEeCCHHHHHcCC
Confidence            5789999997 99999999999999999999999887666554332110000     00000 00011112334567889


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+...
T Consensus        76 D~Vi~~v~~   84 (328)
T PRK14618         76 DFAVVAVPS   84 (328)
T ss_pred             CEEEEECch
Confidence            999988864

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.44  E-value=0.058  Score=53.69  Aligned_cols=104  Identities=18%  Similarity=0.233  Sum_probs=67.5

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHH----HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQ----ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~----~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ||.|.|+ |++|+.++..|+.+|.  +++.++.+.+++.    +|.....-      ....++.+..+|       .+.+
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~------~~~~~~~i~~~~-------y~~~   66 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATAL------TYSTNTKIRAGD-------YDDC   66 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhcc------CCCCCEEEEECC-------HHHh
Confidence            6899998 9999999999999883  7999998776432    22211110      000122333333       3568


Q ss_pred             cCcCEEEEccCCCCC-CC------CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           80 GNAGKVVVTIGPTED-GP------TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-~~------~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +++|+||.++|.... +.      .+..|..-...++..+.+++-..++++
T Consensus        67 ~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~iv  117 (307)
T cd05290          67 ADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIIL  117 (307)
T ss_pred             CCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence            999999999997432 21      125666666777888888875555444

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.44  E-value=0.014  Score=59.01  Aligned_cols=34  Identities=29%  Similarity=0.353  Sum_probs=29.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~   38 (427)
                      ++|+|+||||++|++|++.|..++ ++|+++.++.
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~   35 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP   35 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence            489999999999999999998876 6988885543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.43  E-value=0.017  Score=55.83  Aligned_cols=67  Identities=22%  Similarity=0.231  Sum_probs=49.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ||+|.|+|+ |.+|+.++..|++.|   +.|++++|++.+.+.+... +..             +    ..+   ..+.+
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~-------------~----~~~---~~~~~   60 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVR-------------A----ATD---NQEAA   60 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCe-------------e----cCC---hHHHH
Confidence            678999997 999999999999999   7899999998765555332 111             1    112   23446


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      ..+|+||.+..+
T Consensus        61 ~~advVil~v~~   72 (267)
T PRK11880         61 QEADVVVLAVKP   72 (267)
T ss_pred             hcCCEEEEEcCH
Confidence            789999987754

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.43  E-value=0.03  Score=52.42  Aligned_cols=87  Identities=28%  Similarity=0.367  Sum_probs=63.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+|.|| |.+|.+-++.|++.|.+|++++.+... ...+..            ..++.++..++...     .+.+
T Consensus         8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~------------~~~i~~~~~~~~~~-----dl~~   69 (205)
T TIGR01470         8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAE------------QGGITWLARCFDAD-----ILEG   69 (205)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH------------cCCEEEEeCCCCHH-----HhCC
Confidence            4578999998 999999999999999999999877652 223321            23566888887632     2678


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      ++.||.+.+.      .++|    ..+...|+..|+
T Consensus        70 ~~lVi~at~d------~~ln----~~i~~~a~~~~i   95 (205)
T TIGR01470        70 AFLVIAATDD------EELN----RRVAHAARARGV   95 (205)
T ss_pred             cEEEEECCCC------HHHH----HHHHHHHHHcCC
Confidence            8888876542      2344    458888887765

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.43  E-value=0.039  Score=48.16  Aligned_cols=106  Identities=18%  Similarity=0.163  Sum_probs=62.1

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------Hh-h----hhhhhhhh-hccceEEEecCC
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------AA-S----YKILSKEE-LKRLNAVESNFD   70 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~~-~----~~~~~~~~-~~rl~vv~gDl~   70 (427)
                      +|+|.|+ |.+|+.+++.|...|+ ++++++.+.-....+.+.        |. +    ...+.... .-+++.+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899998 9999999999999996 688887553111111000        00 0    00000000 112334444544


Q ss_pred             CHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           71 SAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        71 D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +. .....+.++|+||.+....          .....+.++|++.+++ ++..+
T Consensus        80 ~~-~~~~~~~~~diVi~~~d~~----------~~~~~l~~~~~~~~i~-~i~~~  121 (143)
T cd01483          80 ED-NLDDFLDGVDLVIDAIDNI----------AVRRALNRACKELGIP-VIDAG  121 (143)
T ss_pred             hh-hHHHHhcCCCEEEECCCCH----------HHHHHHHHHHHHcCCC-EEEEc
Confidence            33 3366788999999877541          1345678999999875 44333

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.42  E-value=0.03  Score=55.43  Aligned_cols=69  Identities=25%  Similarity=0.245  Sum_probs=50.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+|. |.+|+.+++.|++.|++|++.+|++++.+.+...+..               .  ..+++.+.+.+.++|+
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~---------------~--~~~~~e~~~~~~~~dv   62 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGAT---------------G--ADSLEELVAKLPAPRV   62 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCe---------------e--cCCHHHHHhhcCCCCE
Confidence            47999995 9999999999999999999999998877666443322               1  1244444333445688


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.+...
T Consensus        63 vi~~v~~   69 (301)
T PRK09599         63 VWLMVPA   69 (301)
T ss_pred             EEEEecC
Confidence            8887754

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.40  E-value=0.03  Score=55.51  Aligned_cols=42  Identities=26%  Similarity=0.264  Sum_probs=36.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA   45 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~   45 (427)
                      +.++|.|+|+ |.+|..++..|++.|++|++++++.+..+.+.
T Consensus         3 ~~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~   44 (311)
T PRK06130          3 PIQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERAR   44 (311)
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence            4578999997 99999999999999999999999987665543

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.39  E-value=0.031  Score=58.25  Aligned_cols=106  Identities=13%  Similarity=0.026  Sum_probs=69.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-------CC--eEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-------GF--SVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFD   70 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-------G~--~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~   70 (427)
                      +-+|.|+|++|++|.+++..|+..       |.  ++..++++.+++..    |.....-      . ..++.+..+   
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~------~-~~~v~i~~~---  169 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP------L-LREVSIGID---  169 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh------h-cCceEEecC---
Confidence            458999999999999999999988       64  78889998876532    2211100      0 011111222   


Q ss_pred             CHHHHHHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHH-cCCCeEEEE
Q 044905           71 SAESIAKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQL-AGVGHVAII  123 (427)
Q Consensus        71 D~~sl~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~-~gVk~~V~v  123 (427)
                      |    ...++++|+||.++|.... +.    ..+.|..-...+.....+ ++-.-++++
T Consensus       170 ~----ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIV  224 (444)
T PLN00112        170 P----YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIV  224 (444)
T ss_pred             C----HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            2    3568999999999997442 11    345666667778888888 564444444

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.38  E-value=0.031  Score=54.88  Aligned_cols=113  Identities=18%  Similarity=0.159  Sum_probs=66.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ++|.++|- |..|..++.+|+++||+|++..|++++ .+.+...|...---..+.....++|..=+.|.+.+...+-+-+
T Consensus         1 ~kIafIGL-G~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~   79 (286)
T COG2084           1 MKIAFIGL-GIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGEN   79 (286)
T ss_pred             CeEEEEcC-chhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCcc
Confidence            47888995 999999999999999999999999998 4555444544211111222333455555555555555554322


Q ss_pred             EEEEccCCCCC-CCCccccHHHHHHHHHHHHHcCCC
Q 044905           84 KVVVTIGPTED-GPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        84 ~Vi~~ag~~~~-~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      .++..+.+... =.+..+....++.+.+.+...|+.
T Consensus        80 g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~  115 (286)
T COG2084          80 GLLEGLKPGAIVIDMSTISPETARELAAALAAKGLE  115 (286)
T ss_pred             chhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCc
Confidence            22221111000 002334445667777777777764

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.37  E-value=0.012  Score=58.69  Aligned_cols=72  Identities=24%  Similarity=0.322  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.++|+|.|+ |.+|..+++.|...| ..|+++.|++.+...+.....              .   +..+.+.+.+++..
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g--------------~---~~~~~~~~~~~l~~  238 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG--------------G---NAVPLDELLELLNE  238 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC--------------C---eEEeHHHHHHHHhc
Confidence            4679999998 999999999999876 689999999877665543211              1   12233456777889


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||.+.+..
T Consensus       239 aDvVi~at~~~  249 (311)
T cd05213         239 ADVVISATGAP  249 (311)
T ss_pred             CCEEEECCCCC
Confidence            99999998864

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.37  E-value=0.013  Score=62.15  Aligned_cols=83  Identities=22%  Similarity=0.260  Sum_probs=52.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHh----hhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAA----SYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~----~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .++|.|+|+ |.+|+.++..|+..|++|++.++++++.+.+.....    ....+.....    ...+.+.=.+++..++
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~g~i~~~~~~~ea~   78 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPL----PPEGRLTFCASLAEAV   78 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchh----hhhhceEeeCCHHHHh
Confidence            468999986 999999999999999999999999887654322100    0000000000    0001111122456778


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      ++||+||.++..
T Consensus        79 ~~aD~Vieavpe   90 (495)
T PRK07531         79 AGADWIQESVPE   90 (495)
T ss_pred             cCCCEEEEcCcC
Confidence            999999987754

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.35  E-value=0.012  Score=61.03  Aligned_cols=72  Identities=25%  Similarity=0.370  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.++|+|+|+ |.+|+.++..|...|+ +|++..|++.++..+.....                 ++..+.+.+...+.+
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g-----------------~~~~~~~~~~~~l~~  242 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG-----------------GEAIPLDELPEALAE  242 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC-----------------CcEeeHHHHHHHhcc
Confidence            4578999997 9999999999999997 79999999877655543210                 112233556777889


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||.+.+..
T Consensus       243 aDvVI~aT~s~  253 (423)
T PRK00045        243 ADIVISSTGAP  253 (423)
T ss_pred             CCEEEECCCCC
Confidence            99999988753

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.34  E-value=0.011  Score=60.12  Aligned_cols=90  Identities=12%  Similarity=0.063  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCe---EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFS---VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~---V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |++|.|.||||++|+.+++.|+++ .+.   ++.+..+.+ ........            +......++.|.+.    +
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~s-g~~~~~f~------------g~~~~v~~~~~~~~----~   63 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQA-GGAAPSFG------------GKEGTLQDAFDIDA----L   63 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhh-CCcccccC------------CCcceEEecCChhH----h
Confidence            478999999999999999966654 566   666554321 11111100            01123344444443    4


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .++|+||.+++..           -+..+...+..+|++.+|
T Consensus        64 ~~~Divf~a~~~~-----------~s~~~~~~~~~aG~~~~V   94 (369)
T PRK06598         64 KKLDIIITCQGGD-----------YTNEVYPKLRAAGWQGYW   94 (369)
T ss_pred             cCCCEEEECCCHH-----------HHHHHHHHHHhCCCCeEE
Confidence            6899999988642           345677777778875333

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.33  E-value=0.042  Score=54.68  Aligned_cols=75  Identities=23%  Similarity=0.166  Sum_probs=52.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCC-HHHHHHHh-c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDS-AESIAKAI-G   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al-~   80 (427)
                      .+|+|+||+|.+|..+++.+...|+ +|++++++.++.+.+.. .|.+.            ++..+-.+ .+.+.+.. .
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~------------vi~~~~~~~~~~i~~~~~~  223 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA------------AINYKTDNVAERLRELCPE  223 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE------------EEECCCCCHHHHHHHHCCC
Confidence            6899999999999999999999998 89999998877665544 55541            22222122 23333332 3


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.++|.
T Consensus       224 gvd~vid~~g~  234 (345)
T cd08293         224 GVDVYFDNVGG  234 (345)
T ss_pred             CceEEEECCCc
Confidence            68999998874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.32  E-value=0.033  Score=55.33  Aligned_cols=108  Identities=16%  Similarity=0.105  Sum_probs=64.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccc-eEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRL-NAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl-~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.|.|+ |++|..++..|+..|+ +|++++.+..........     +.+......+ ..+.. ..|.+    .+.++
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d-----~~~~~~~~~~~~~i~~-t~d~~----~~~~a   70 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALD-----MYEASPVGGFDTKVTG-TNNYA----DTANS   70 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHh-----hhhhhhccCCCcEEEe-cCCHH----HhCCC
Confidence            58999997 9999999999999886 899999876533211100     0000000000 01211 12222    26899


Q ss_pred             CEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |.||.++|......     ....|..-...+++.+.+.+-..++++
T Consensus        71 DiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv  116 (305)
T TIGR01763        71 DIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVV  116 (305)
T ss_pred             CEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            99999999654311     123566666777777777764444444

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.30  E-value=0.02  Score=58.60  Aligned_cols=35  Identities=31%  Similarity=0.444  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE   37 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~   37 (427)
                      .+++|+|.||+|.+|..++..|.+.|+.|++.+|+
T Consensus        97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~  131 (374)
T PRK11199         97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD  131 (374)
T ss_pred             ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence            45789999999999999999999999999999986

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=96.30  E-value=0.03  Score=55.07  Aligned_cols=41  Identities=27%  Similarity=0.295  Sum_probs=36.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE   43 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~   43 (427)
                      |+.++|.|+|+ |.+|+.++..|+..|++|++++++++..+.
T Consensus         1 ~~i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~   41 (291)
T PRK06035          1 MDIKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKN   41 (291)
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence            44578999997 999999999999999999999999876543

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.30  E-value=0.027  Score=58.64  Aligned_cols=75  Identities=19%  Similarity=0.174  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH----HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA----QELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~----~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ..++|+|+|++| +|..+++.|++.|++|++.+++....    ..+...++             .+..+..  ...   .
T Consensus         4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~-------------~~~~~~~--~~~---~   64 (447)
T PRK02472          4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGI-------------KVICGSH--PLE---L   64 (447)
T ss_pred             CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCC-------------EEEeCCC--CHH---H
Confidence            357899999976 99999999999999999998765321    22322232             2333332  111   1


Q ss_pred             hc-CcCEEEEccCCCCCCC
Q 044905           79 IG-NAGKVVVTIGPTEDGP   96 (427)
Q Consensus        79 l~-g~d~Vi~~ag~~~~~~   96 (427)
                      +. ++|.||.+.|.....+
T Consensus        65 ~~~~~d~vV~s~gi~~~~~   83 (447)
T PRK02472         65 LDEDFDLMVKNPGIPYTNP   83 (447)
T ss_pred             hcCcCCEEEECCCCCCCCH
Confidence            33 4899999998764433

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=96.29  E-value=0.012  Score=54.24  Aligned_cols=73  Identities=15%  Similarity=0.198  Sum_probs=44.1

Q ss_pred             CCEEEEEc----------------CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEe
Q 044905            4 SGTVFVAG----------------ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVES   67 (427)
Q Consensus         4 ~~kIlItG----------------ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~g   67 (427)
                      .++||||+                +||..|..|+++++.+|++|+.+....+ ...  +.+               +...
T Consensus         3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--p~~---------------~~~i   64 (185)
T PF04127_consen    3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--PPG---------------VKVI   64 (185)
T ss_dssp             T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TT---------------EEEE
T ss_pred             CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--ccc---------------ceEE
Confidence            46788887                5899999999999999999999998742 111  111               2333


Q ss_pred             cCCCHHHH----HHHhcCcCEEEEccCCCCC
Q 044905           68 NFDSAESI----AKAIGNAGKVVVTIGPTED   94 (427)
Q Consensus        68 Dl~D~~sl----~~al~g~d~Vi~~ag~~~~   94 (427)
                      ++...+.|    .+.+..+|++|++|+....
T Consensus        65 ~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   65 RVESAEEMLEAVKELLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             E-SSHHHHHHHHHHHGGGGSEEEE-SB--SE
T ss_pred             EecchhhhhhhhccccCcceeEEEecchhhe
Confidence            44454444    4455678999999998653

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.29  E-value=0.018  Score=56.55  Aligned_cols=76  Identities=14%  Similarity=0.050  Sum_probs=53.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .++++|.|+ |..|+.++..|...|. +|+++.|+.++++.+.......          ..+..  +...+.+...+..+
T Consensus       125 ~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~----------~~~~~--~~~~~~~~~~~~~~  191 (282)
T TIGR01809       125 GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV----------GVITR--LEGDSGGLAIEKAA  191 (282)
T ss_pred             CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc----------Cccee--ccchhhhhhcccCC
Confidence            468999997 9999999999999996 7999999998887775432110          00111  22223344566789


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+||++....
T Consensus       192 DiVInaTp~g  201 (282)
T TIGR01809       192 EVLVSTVPAD  201 (282)
T ss_pred             CEEEECCCCC
Confidence            9999988653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.28  E-value=0.021  Score=57.77  Aligned_cols=75  Identities=15%  Similarity=0.168  Sum_probs=57.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .+.|||.||+|.+|+..++.+...|+.+++.+++.++.+.....|+.              ...|+.|++.+.....   
T Consensus       158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd--------------~vvdy~~~~~~e~~kk~~~  223 (347)
T KOG1198|consen  158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGAD--------------EVVDYKDENVVELIKKYTG  223 (347)
T ss_pred             CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCc--------------EeecCCCHHHHHHHHhhcC
Confidence            45899999999999999999999995555566666666666666664              4557777665555544   


Q ss_pred             -CcCEEEEccCCC
Q 044905           81 -NAGKVVVTIGPT   92 (427)
Q Consensus        81 -g~d~Vi~~ag~~   92 (427)
                       ++|+|+.|+|..
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence             699999999874

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.26  E-value=0.055  Score=52.84  Aligned_cols=70  Identities=23%  Similarity=0.202  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEE-ecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE--GFSVRAG-VPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~--G~~V~al-~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |.+++|.|.|. |.+|+.+++.|.+.  +++|.++ +|++++...+... +..                .-..|.+.   
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~----------------~~~~~~ee---   63 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRP----------------PPVVPLDQ---   63 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCC----------------cccCCHHH---
Confidence            56678999996 99999999999874  7888755 5666555444321 100                01234444   


Q ss_pred             HhcCcCEEEEccCC
Q 044905           78 AIGNAGKVVVTIGP   91 (427)
Q Consensus        78 al~g~d~Vi~~ag~   91 (427)
                      ++.++|+|+.+++.
T Consensus        64 ll~~~D~Vvi~tp~   77 (271)
T PRK13302         64 LATHADIVVEAAPA   77 (271)
T ss_pred             HhcCCCEEEECCCc
Confidence            35678999988764

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.25  E-value=0.01  Score=58.39  Aligned_cols=67  Identities=16%  Similarity=0.198  Sum_probs=50.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +++|.|+|. |.+|..++..|++.|++|++.+|++.+.+.+...+..              +   ..   ++.++++.+|
T Consensus         2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~--------------~---~~---~~~e~~~~~d   60 (296)
T PRK11559          2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAE--------------T---AS---TAKAVAEQCD   60 (296)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe--------------e---cC---CHHHHHhcCC
Confidence            468999995 9999999999999999999999998766555432221              1   11   2345678899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+...
T Consensus        61 ~vi~~vp~   68 (296)
T PRK11559         61 VIITMLPN   68 (296)
T ss_pred             EEEEeCCC
Confidence            99998764

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.24  E-value=0.026  Score=52.52  Aligned_cols=114  Identities=18%  Similarity=0.126  Sum_probs=66.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH----------HHh------hhhhhhhhhhccceEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR----------LAA------SYKILSKEELKRLNAV   65 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~----------~~~------~~~~~~~~~~~rl~vv   65 (427)
                      ...+|+|.|+.| +|+.+++.|+..|. +++.++.+.-....+.+          .|.      ...+.+-...-+++.+
T Consensus        18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~   96 (198)
T cd01485          18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV   96 (198)
T ss_pred             hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            356899999855 99999999999995 68888755321111100          000      0000000011234444


Q ss_pred             EecCCC-HHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccc
Q 044905           66 ESNFDS-AESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNT  128 (427)
Q Consensus        66 ~gDl~D-~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v  128 (427)
                      ..++.+ .+.....+..+|+||.+...          ......+-+.|+..+++ +++.++.+.
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~----------~~~~~~ln~~c~~~~ip-~i~~~~~G~  149 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEEN----------YERTAKVNDVCRKHHIP-FISCATYGL  149 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCCC----------HHHHHHHHHHHHHcCCC-EEEEEeecC
Confidence            445542 34556678899999977542          11335577899999874 555555554

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.24  E-value=0.039  Score=54.56  Aligned_cols=69  Identities=17%  Similarity=0.194  Sum_probs=49.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+|. |.+|.++++.|++.|++|++..|++++.+.+...+..               .  ..+++.+.+....+|+
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~---------------~--~~s~~~~~~~~~~adv   62 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGIT---------------A--RHSLEELVSKLEAPRT   62 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCe---------------e--cCCHHHHHHhCCCCCE
Confidence            47999985 9999999999999999999999998776666443321               1  1233333322334689


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.+...
T Consensus        63 Vi~~vp~   69 (299)
T PRK12490         63 IWVMVPA   69 (299)
T ss_pred             EEEEecC
Confidence            9887764

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.24  E-value=0.033  Score=54.39  Aligned_cols=69  Identities=16%  Similarity=0.181  Sum_probs=50.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcc-hHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG----FSVRAGVPELG-AAQELARL-AASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~-~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      |+.|+|.|+|+ |.+|+.+++.|++.|    ++|++..|++. +.+.+... +..             + .   .+   .
T Consensus         1 ~~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~-------------~-~---~~---~   59 (279)
T PRK07679          1 MSIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVK-------------G-T---HN---K   59 (279)
T ss_pred             CCCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCce-------------E-e---CC---H
Confidence            67789999995 999999999999998    78999998764 34444321 211             1 1   12   2


Q ss_pred             HHHhcCcCEEEEccCC
Q 044905           76 AKAIGNAGKVVVTIGP   91 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~   91 (427)
                      .++...+|+||.+.-+
T Consensus        60 ~e~~~~aDvVilav~p   75 (279)
T PRK07679         60 KELLTDANILFLAMKP   75 (279)
T ss_pred             HHHHhcCCEEEEEeCH
Confidence            3456789999998875

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.22  E-value=0.014  Score=49.60  Aligned_cols=85  Identities=22%  Similarity=0.307  Sum_probs=52.3

Q ss_pred             CEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++|+|.|+|   +..|..+++.|.+.||+|+.+..........                   -+.-++      .+.-+.
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~G~-------------------~~y~sl------~e~p~~   55 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEILGI-------------------KCYPSL------AEIPEP   55 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEETTE-------------------E-BSSG------GGCSST
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEECcE-------------------Eeeccc------cCCCCC
Confidence            589999988   7789999999999999999887654321110                   011122      221356


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEec
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYD  125 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSS  125 (427)
                      +|.++.+..+.           .+..+++.|...|++.+++.++
T Consensus        56 iDlavv~~~~~-----------~~~~~v~~~~~~g~~~v~~~~g   88 (116)
T PF13380_consen   56 IDLAVVCVPPD-----------KVPEIVDEAAALGVKAVWLQPG   88 (116)
T ss_dssp             -SEEEE-S-HH-----------HHHHHHHHHHHHT-SEEEE-TT
T ss_pred             CCEEEEEcCHH-----------HHHHHHHHHHHcCCCEEEEEcc
Confidence            88888776542           4567888888889999987764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.21  E-value=0.064  Score=50.88  Aligned_cols=109  Identities=17%  Similarity=0.154  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH--------HHhh-----hhhhhhhh-hccceEEEe
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR--------LAAS-----YKILSKEE-LKRLNAVES   67 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~--------~~~~-----~~~~~~~~-~~rl~vv~g   67 (427)
                      ...+|+|.|+ |.+|++++..|...|. ++++++.+.-....+.+        .|..     ...+.... .-+++.+..
T Consensus        20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~   98 (228)
T cd00757          20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNE   98 (228)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecc
Confidence            4568999997 8899999999999995 67777644311111100        0000     00000000 113344444


Q ss_pred             cCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           68 NFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        68 Dl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++ +.+.+.+.+.++|+||.+....      .    .-..+-++|...+++ +|+.+
T Consensus        99 ~i-~~~~~~~~~~~~DvVi~~~d~~------~----~r~~l~~~~~~~~ip-~i~~g  143 (228)
T cd00757          99 RL-DAENAEELIAGYDLVLDCTDNF------A----TRYLINDACVKLGKP-LVSGA  143 (228)
T ss_pred             ee-CHHHHHHHHhCCCEEEEcCCCH------H----HHHHHHHHHHHcCCC-EEEEE
Confidence            55 3466777889999999987532      1    224577888888874 45443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.20  E-value=0.02  Score=57.04  Aligned_cols=79  Identities=23%  Similarity=0.344  Sum_probs=56.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH--HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL--AASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~--~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +++|.|+|+ |.-|++|+..|.++||+|+.-.|+++-..++...  +..|-       +.+ ..+.++.=..++..++++
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yL-------p~i-~lp~~l~at~Dl~~a~~~   71 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYL-------PGI-LLPPNLKATTDLAEALDG   71 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCcccc-------CCc-cCCcccccccCHHHHHhc
Confidence            579999998 9999999999999999999999998876665442  22210       000 122233334567889999


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+|+..+..
T Consensus        72 ad~iv~avPs   81 (329)
T COG0240          72 ADIIVIAVPS   81 (329)
T ss_pred             CCEEEEECCh
Confidence            9999987653

>PLN02688 pyrroline-5-carboxylate reductase

Probab=96.20  E-value=0.021  Score=55.23  Aligned_cols=65  Identities=14%  Similarity=0.221  Sum_probs=47.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC----eEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF----SVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~----~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |+|.|+| +|.+|..+++.|++.|+    +|++. .|++++...+...++.             + .   .+   ..+++
T Consensus         1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~-------------~-~---~~---~~e~~   59 (266)
T PLN02688          1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVK-------------T-A---AS---NTEVV   59 (266)
T ss_pred             CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCE-------------E-e---CC---hHHHH
Confidence            5799999 59999999999999998    88888 8887765555433321             1 1   12   23456


Q ss_pred             cCcCEEEEccC
Q 044905           80 GNAGKVVVTIG   90 (427)
Q Consensus        80 ~g~d~Vi~~ag   90 (427)
                      +++|+||.+.-
T Consensus        60 ~~aDvVil~v~   70 (266)
T PLN02688         60 KSSDVIILAVK   70 (266)
T ss_pred             hcCCEEEEEEC
Confidence            78999999883

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.19  E-value=0.017  Score=59.91  Aligned_cols=73  Identities=15%  Similarity=0.205  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+|.|+ |..|+.++.+|...|. +|++..|+..++..+......                +.....+.+...+..
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----------------~~~~~~~~l~~~l~~  242 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----------------ASAHYLSELPQLIKK  242 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----------------CeEecHHHHHHHhcc
Confidence            3568999998 9999999999999995 799999998877666542110                122234566788999


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||++.+..
T Consensus       243 aDiVI~aT~a~  253 (414)
T PRK13940        243 ADIIIAAVNVL  253 (414)
T ss_pred             CCEEEECcCCC
Confidence            99999998764

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=96.19  E-value=0.0083  Score=58.93  Aligned_cols=65  Identities=20%  Similarity=0.252  Sum_probs=50.1

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEE
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKV   85 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~V   85 (427)
                      +|.|+|. |.+|+.++..|++.|++|++.+|++++.+.+...+..                    ...+..++++++|+|
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~--------------------~~~~~~~~~~~aDiv   59 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV--------------------TAETARQVTEQADVI   59 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc--------------------ccCCHHHHHhcCCEE
Confidence            4889985 9999999999999999999999998776665443321                    111345678899999


Q ss_pred             EEccCC
Q 044905           86 VVTIGP   91 (427)
Q Consensus        86 i~~ag~   91 (427)
                      |.+...
T Consensus        60 i~~vp~   65 (291)
T TIGR01505        60 FTMVPD   65 (291)
T ss_pred             EEecCC
Confidence            998764

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=96.18  E-value=0.02  Score=58.38  Aligned_cols=66  Identities=17%  Similarity=0.295  Sum_probs=54.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |++|+|+|+ |.+|+.++..+.+.|++|++++.++... ..+    .+            ..+.+|+.|.+.+.++.+.+
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~----ad------------~~~~~~~~D~~~l~~~a~~~   64 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQV----AD------------EVIVADYDDVAALRELAEQC   64 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHh----Cc------------eEEecCCCCHHHHHHHHhcC
Confidence            578999998 8999999999999999999999876532 111    11            26778999999999999999


Q ss_pred             CEEE
Q 044905           83 GKVV   86 (427)
Q Consensus        83 d~Vi   86 (427)
                      |+|.
T Consensus        65 dvit   68 (372)
T PRK06019         65 DVIT   68 (372)
T ss_pred             CEEE
Confidence            9874

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.15  E-value=0.013  Score=57.64  Aligned_cols=74  Identities=24%  Similarity=0.210  Sum_probs=51.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .++|+|+|+ |..|++++..|+..|. +|+++.|+..+++.+.......       .....+  ..+   +.+...+.++
T Consensus       127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~-------~~~~~~--~~~---~~~~~~~~~a  193 (284)
T PRK12549        127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR-------FPAARA--TAG---SDLAAALAAA  193 (284)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh-------CCCeEE--Eec---cchHhhhCCC
Confidence            468999998 8899999999999996 7999999988877665432110       000111  112   2234567889


Q ss_pred             CEEEEccC
Q 044905           83 GKVVVTIG   90 (427)
Q Consensus        83 d~Vi~~ag   90 (427)
                      |+||++..
T Consensus       194 DiVInaTp  201 (284)
T PRK12549        194 DGLVHATP  201 (284)
T ss_pred             CEEEECCc
Confidence            99999853

>PLN00203 glutamyl-tRNA reductase

Probab=96.14  E-value=0.022  Score=60.64  Aligned_cols=74  Identities=16%  Similarity=0.253  Sum_probs=55.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .++|+|+|+ |.+|+.+++.|+..|+ +|+++.|+..++..+......           ..+.   +.+.+.+..++.++
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-----------~~i~---~~~~~dl~~al~~a  330 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-----------VEII---YKPLDEMLACAAEA  330 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-----------CceE---eecHhhHHHHHhcC
Confidence            578999998 9999999999999996 799999998877766542111           0111   22334566778999


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+||.+.+..
T Consensus       331 DVVIsAT~s~  340 (519)
T PLN00203        331 DVVFTSTSSE  340 (519)
T ss_pred             CEEEEccCCC
Confidence            9999987643

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.14  E-value=0.049  Score=53.22  Aligned_cols=40  Identities=28%  Similarity=0.197  Sum_probs=35.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ   42 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~   42 (427)
                      |.+++|.|.|+ |.+|..++..|+..|++|++++++++..+
T Consensus         1 ~~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~~~   40 (282)
T PRK05808          1 MGIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAAVD   40 (282)
T ss_pred             CCccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHHHH
Confidence            45678999998 99999999999999999999999987653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.13  E-value=0.023  Score=55.32  Aligned_cols=73  Identities=21%  Similarity=0.262  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++++|+|+ |.+|+.++..|++.|++|+++.|+..+.+.+.......        ..  ....++.+     ..+.++|
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--------~~--~~~~~~~~-----~~~~~~D  180 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--------GE--IQAFSMDE-----LPLHRVD  180 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--------Cc--eEEechhh-----hcccCcc
Confidence            568999998 89999999999999999999999987766654431110        00  11122211     1245789


Q ss_pred             EEEEccCCC
Q 044905           84 KVVVTIGPT   92 (427)
Q Consensus        84 ~Vi~~ag~~   92 (427)
                      +||++.+..
T Consensus       181 ivInatp~g  189 (270)
T TIGR00507       181 LIINATSAG  189 (270)
T ss_pred             EEEECCCCC
Confidence            999988764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.12  E-value=0.022  Score=55.99  Aligned_cols=73  Identities=27%  Similarity=0.334  Sum_probs=51.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~g~   82 (427)
                      ..+++|+||+|.+|..+++.+...|+.|++++|++...+.+...+..            .++  +..+ .+.+.. +.++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~-~~~~  227 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGAD------------YVI--DGSKFSEDVKK-LGGA  227 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCc------------EEE--ecHHHHHHHHh-ccCC
Confidence            45899999999999999999999999999999887665555333322            122  2221 122222 2379


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |.+|+++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.12  E-value=0.037  Score=54.81  Aligned_cols=107  Identities=18%  Similarity=0.126  Sum_probs=66.0

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            7 VFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |.|.|+ |++|+.++..|+..|  .++++++++.+++..+....-+..   .. .....+..+  .|    ...+.++|+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~---~~-~~~~~i~~~--~~----~~~l~~aDi   69 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHAS---AF-LATGTIVRG--GD----YADAADADI   69 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhc---cc-cCCCeEEEC--CC----HHHhCCCCE
Confidence            578897 899999999999998  689999998876543322111100   00 011122221  22    347999999


Q ss_pred             EEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           85 VVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        85 Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ||.++|......     ....|..-...+.+.+++++-+-++++.
T Consensus        70 VIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~  114 (300)
T cd00300          70 VVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVV  114 (300)
T ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEc
Confidence            999999644211     2344555566677777777755555443

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.10  E-value=0.012  Score=53.65  Aligned_cols=68  Identities=21%  Similarity=0.218  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|.|+|. |.||+.+++.|..-|.+|++++|+..........+               + .  .   .++.+++..+|
T Consensus        36 g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~---------------~-~--~---~~l~ell~~aD   93 (178)
T PF02826_consen   36 GKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFG---------------V-E--Y---VSLDELLAQAD   93 (178)
T ss_dssp             TSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTT---------------E-E--E---SSHHHHHHH-S
T ss_pred             CCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccc---------------c-e--e---eehhhhcchhh
Confidence            568999996 99999999999999999999999987533121111               1 1  1   13556788899


Q ss_pred             EEEEccCCCC
Q 044905           84 KVVVTIGPTE   93 (427)
Q Consensus        84 ~Vi~~ag~~~   93 (427)
                      +|+++...+.
T Consensus        94 iv~~~~plt~  103 (178)
T PF02826_consen   94 IVSLHLPLTP  103 (178)
T ss_dssp             EEEE-SSSST
T ss_pred             hhhhhhcccc
Confidence            9998887654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.07  E-value=0.035  Score=55.12  Aligned_cols=35  Identities=26%  Similarity=0.282  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      ..|+|.|.|+ |.+|+.++..|.+.||+|++..|+.
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4578999996 9999999999999999999999985

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.06  E-value=0.02  Score=58.94  Aligned_cols=72  Identities=25%  Similarity=0.359  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++++|+|| |-.|.-++++|.++| ..|++..|+..++..|...                 +.++....+.+...+..
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-----------------~~~~~~~l~el~~~l~~  238 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-----------------LGAEAVALEELLEALAE  238 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-----------------hCCeeecHHHHHHhhhh
Confidence            3568999998 999999999999999 7899999999988877542                 11445566778889999


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||.+.+..
T Consensus       239 ~DvVissTsa~  249 (414)
T COG0373         239 ADVVISSTSAP  249 (414)
T ss_pred             CCEEEEecCCC
Confidence            99999988753

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.06  E-value=0.038  Score=54.28  Aligned_cols=41  Identities=27%  Similarity=0.221  Sum_probs=36.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQE   43 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~   43 (427)
                      |+.++|.|+|+ |.+|..++..|+.+|++|++++|+++..+.
T Consensus         2 ~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~   42 (292)
T PRK07530          2 MAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEA   42 (292)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            56689999997 999999999999999999999999876544

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=96.04  E-value=0.027  Score=56.13  Aligned_cols=77  Identities=13%  Similarity=0.184  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++.+|.|.||||++|..|++.|.++. .++..+.++..+                           ++.+   ....+.+
T Consensus         1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~---------------------------~~~~---~~~~~~~   50 (313)
T PRK11863          1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK---------------------------DAAA---RRELLNA   50 (313)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC---------------------------cccC---chhhhcC
Confidence            35789999999999999999999887 577777655332                           0111   1234567


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||.+.+..           -+..++..+...|+ ++|
T Consensus        51 ~DvvFlalp~~-----------~s~~~~~~~~~~g~-~VI   78 (313)
T PRK11863         51 ADVAILCLPDD-----------AAREAVALIDNPAT-RVI   78 (313)
T ss_pred             CCEEEECCCHH-----------HHHHHHHHHHhCCC-EEE
Confidence            99999877531           33456666666676 354

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.03  E-value=0.024  Score=52.75  Aligned_cols=42  Identities=31%  Similarity=0.393  Sum_probs=36.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA   45 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~   45 (427)
                      ..++|+|+|. |.+|+++++.|.+.|++|++.++++.+...+.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~   68 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAA   68 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            4578999998 89999999999999999999998876655543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.03  E-value=0.046  Score=48.92  Aligned_cols=82  Identities=24%  Similarity=0.292  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|.|| |.+|.+.++.|++.|++|+++...  ..+++...            ..+.+....+...     -+.++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~--~~~~l~~l------------~~i~~~~~~~~~~-----dl~~a   71 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE--ICKEMKEL------------PYITWKQKTFSND-----DIKDA   71 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc--cCHHHHhc------------cCcEEEecccChh-----cCCCc
Confidence            4578999998 999999999999999999988533  23344321            1223444343322     26778


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHH
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL  114 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~  114 (427)
                      |.||.+...      .++|    ..+...|+.
T Consensus        72 ~lViaaT~d------~e~N----~~i~~~a~~   93 (157)
T PRK06719         72 HLIYAATNQ------HAVN----MMVKQAAHD   93 (157)
T ss_pred             eEEEECCCC------HHHH----HHHHHHHHH
Confidence            888875542      3444    335566655

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=95.99  E-value=0.021  Score=57.51  Aligned_cols=90  Identities=20%  Similarity=0.191  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++.++|.|.||||++|..|++.|.++.   .+++.+..+.+.-+.+. ...          ..+ .+. ++..     ..
T Consensus         2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~----------~~~-~v~-~~~~-----~~   63 (336)
T PRK08040          2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGG----------KSV-TVQ-DAAE-----FD   63 (336)
T ss_pred             CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECC----------cce-EEE-eCch-----hh
Confidence            467799999999999999999999853   57777765543222221 000          001 122 3321     13


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +.++|+||.+++..           .+..++..+...|+ .+|
T Consensus        64 ~~~~Dvvf~a~p~~-----------~s~~~~~~~~~~g~-~VI   94 (336)
T PRK08040         64 WSQAQLAFFVAGRE-----------ASAAYAEEATNAGC-LVI   94 (336)
T ss_pred             ccCCCEEEECCCHH-----------HHHHHHHHHHHCCC-EEE
Confidence            47899999988642           33567776766777 344

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=95.99  E-value=0.022  Score=57.31  Aligned_cols=67  Identities=24%  Similarity=0.319  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +++|.|+|+ |.+|+-++.+...-|++|++++.+++. +....+                .++.++.+|.+.+.++.+.|
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~----------------~~i~~~~dD~~al~ela~~~   63 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVAD----------------RVIVAAYDDPEALRELAAKC   63 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhccc----------------ceeecCCCCHHHHHHHHhhC
Confidence            579999998 999999999999999999999987763 222221                26788889999999999999


Q ss_pred             CEEEE
Q 044905           83 GKVVV   87 (427)
Q Consensus        83 d~Vi~   87 (427)
                      |+|=.
T Consensus        64 DViT~   68 (375)
T COG0026          64 DVITY   68 (375)
T ss_pred             CEEEE
Confidence            98844

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.99  E-value=0.018  Score=56.43  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=49.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE-ecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE-SNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~-gDl~D~~sl~~al~g~d   83 (427)
                      |+|+|.|+ |.+|..++..|.+.|++|++++|+.+..+.+...+...   +  + ... ... .-..+.   ... +.+|
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~---~--~-~~~-~~~~~~~~~~---~~~-~~~d   68 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRL---E--D-GEI-TVPVLAADDP---AEL-GPQD   68 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcc---c--C-Cce-eecccCCCCh---hHc-CCCC
Confidence            57999997 99999999999999999999999876655554433321   0  0 000 000 011222   223 7899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+.-.
T Consensus        69 ~vila~k~   76 (304)
T PRK06522         69 LVILAVKA   76 (304)
T ss_pred             EEEEeccc
Confidence            99998764

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=95.99  E-value=0.038  Score=59.13  Aligned_cols=42  Identities=31%  Similarity=0.295  Sum_probs=36.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      .++++|+|+ |.+|+.++..|++.|++|+++.|+.++++.+..
T Consensus       379 ~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~  420 (529)
T PLN02520        379 GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELAD  420 (529)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            468999999 899999999999999999999998877666643

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=95.98  E-value=0.03  Score=55.03  Aligned_cols=40  Identities=30%  Similarity=0.289  Sum_probs=34.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      |+|+|.|+ |.+|..++..|.+.|++|+++.| .+..+.+..
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~   40 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE   40 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh
Confidence            58999997 99999999999999999999999 655555543

>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain

Probab=95.98  E-value=0.089  Score=55.11  Aligned_cols=88  Identities=22%  Similarity=0.353  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCC---cHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            3 DSGTVFVAGAT---GQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         3 ~~~kIlItGAT---G~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      .+++|+|.|+|   |.+|..+++.|++.||  .|+.+......   +.  |.                    .-..++.+
T Consensus         6 ~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~---i~--G~--------------------~~~~sl~~   60 (447)
T TIGR02717         6 NPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGE---IL--GV--------------------KAYPSVLE   60 (447)
T ss_pred             CCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCc---cC--Cc--------------------cccCCHHH
Confidence            56799999998   6789999999999998  68776655321   10  11                    11122333


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      +-+.+|.++.+..+.           .+..+++.|.+.|++.++++++.
T Consensus        61 lp~~~Dlavi~vp~~-----------~~~~~l~e~~~~gv~~~vi~s~g   98 (447)
T TIGR02717        61 IPDPVDLAVIVVPAK-----------YVPQVVEECGEKGVKGAVVITAG   98 (447)
T ss_pred             CCCCCCEEEEecCHH-----------HHHHHHHHHHhcCCCEEEEECCC
Confidence            345689888777642           45678888999999998877643

Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=95.96  E-value=0.053  Score=52.31  Aligned_cols=98  Identities=20%  Similarity=0.268  Sum_probs=70.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      |+|||+|||+ =|+.|+..|.++|+ |.+-+-..... .+....          ...+.+..|-+.|.+.|.+.++  ++
T Consensus         1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~-~~~~~~----------~~~~~v~~G~lg~~~~l~~~l~~~~i   67 (249)
T PF02571_consen    1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGG-ELLKPE----------LPGLEVRVGRLGDEEGLAEFLRENGI   67 (249)
T ss_pred             CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhH-hhhccc----------cCCceEEECCCCCHHHHHHHHHhCCC
Confidence            7999999998 58999999999999 65544333221 221110          1233588889889999999995  78


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +.||.+.=|      +...  -+.|+.++|++.|+..+-|-
T Consensus        68 ~~vIDATHP------fA~~--is~na~~a~~~~~ipylR~e  100 (249)
T PF02571_consen   68 DAVIDATHP------FAAE--ISQNAIEACRELGIPYLRFE  100 (249)
T ss_pred             cEEEECCCc------hHHH--HHHHHHHHHhhcCcceEEEE
Confidence            999986644      2222  55889999999999877655

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.95  E-value=0.09  Score=53.77  Aligned_cols=102  Identities=16%  Similarity=0.139  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc-------------------chHHHHHHHHhhhhhhhhhhhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL-------------------GAAQELARLAASYKILSKEELK--   60 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~-------------------~~~~~l~~~~~~~~~~~~~~~~--   60 (427)
                      ...+|+|.|+ |.+|+.++..|...|. ++++++++.                   .+++.+.....+      . .+  
T Consensus       134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~------~-np~v  205 (376)
T PRK08762        134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAA------L-NPDV  205 (376)
T ss_pred             hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHH------H-CCCC
Confidence            4568999987 8899999999999996 799888872                   222222111100      0 12  


Q ss_pred             cceEEEecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           61 RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        61 rl~vv~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +++.....+ +.+.+...+.++|+||.+....      .    .-..+-++|.+.+++ +|+.+
T Consensus       206 ~v~~~~~~~-~~~~~~~~~~~~D~Vv~~~d~~------~----~r~~ln~~~~~~~ip-~i~~~  257 (376)
T PRK08762        206 QVEAVQERV-TSDNVEALLQDVDVVVDGADNF------P----TRYLLNDACVKLGKP-LVYGA  257 (376)
T ss_pred             EEEEEeccC-ChHHHHHHHhCCCEEEECCCCH------H----HHHHHHHHHHHcCCC-EEEEE
Confidence            222333334 3456677889999999987532      1    123467889998875 45443

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=95.94  E-value=0.073  Score=52.39  Aligned_cols=39  Identities=33%  Similarity=0.286  Sum_probs=35.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ   42 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~   42 (427)
                      +.++|.|+|+ |.+|..|+..|+..|++|++++++++.++
T Consensus         3 ~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~   41 (295)
T PLN02545          3 EIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALS   41 (295)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence            4578999997 99999999999999999999999987654

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.94  E-value=0.066  Score=54.87  Aligned_cols=104  Identities=13%  Similarity=0.054  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-Ce----EEE--E--ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FS----VRA--G--VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAE   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~----V~a--l--~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~   73 (427)
                      ++-||.|+||+|++|.+++..|+..| +.    |..  +  +++.+++....-...+ ... +. ..++.+..+   |  
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d-~a~-~~-~~~v~i~~~---~--  114 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELED-SLY-PL-LREVSIGID---P--  114 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHH-hhh-hh-cCceEEecC---C--
Confidence            45689999999999999999999987 22    333  3  5666544222110000 000 00 011112222   2  


Q ss_pred             HHHHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcC
Q 044905           74 SIAKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~g  116 (427)
                        ...++++|+||.++|.... +.    ....|..-...+...+.++.
T Consensus       115 --y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a  160 (387)
T TIGR01757       115 --YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVA  160 (387)
T ss_pred             --HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence              3568999999999997542 11    34456666677777777744

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=95.91  E-value=1.2  Score=40.01  Aligned_cols=37  Identities=19%  Similarity=0.187  Sum_probs=32.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |...+|+|.|+-|-+|+++++.+.+++|-|--++-..
T Consensus         1 msagrVivYGGkGALGSacv~~FkannywV~siDl~e   37 (236)
T KOG4022|consen    1 MSAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSE   37 (236)
T ss_pred             CCCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecc
Confidence            5667999999999999999999999999888777554

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.91  E-value=0.029  Score=56.67  Aligned_cols=85  Identities=20%  Similarity=0.252  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-CCCe---EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLR-EGFS---VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~-~G~~---V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .++|.|.||||++|+.+++.|.. ..++   ++.+....+.-+.+ ....          .  ++..-++ |++.    +
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~-~~~~----------~--~l~v~~~-~~~~----~   66 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV-QFKG----------R--EIIIQEA-KINS----F   66 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe-eeCC----------c--ceEEEeC-CHHH----h
Confidence            46899999999999999999995 6677   66666543322222 0000          0  1222233 3333    4


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      .++|+||.+++..           -+..+...+.+.|+
T Consensus        67 ~~~Divf~a~~~~-----------~s~~~~~~~~~~G~   93 (347)
T PRK06728         67 EGVDIAFFSAGGE-----------VSRQFVNQAVSSGA   93 (347)
T ss_pred             cCCCEEEECCChH-----------HHHHHHHHHHHCCC
Confidence            6899999988642           33556666666775

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.88  E-value=0.083  Score=49.66  Aligned_cols=108  Identities=20%  Similarity=0.244  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH-------H-----hhhhhhhhh-hhccceEEEec
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL-------A-----ASYKILSKE-ELKRLNAVESN   68 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~-------~-----~~~~~~~~~-~~~rl~vv~gD   68 (427)
                      ...+|+|.|+ |.+|+.++..|.+.|. ++++++.+.-....|.+.       +     .-..-+... ..-+++.+...
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~  105 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEK  105 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeee
Confidence            4568999997 8999999999999996 588888773111111000       0     000000000 01233444455


Q ss_pred             CCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEEEE
Q 044905           69 FDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVAII  123 (427)
Q Consensus        69 l~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V~v  123 (427)
                      +++ +.+.+.+.++|+||.+...      ..    .-..+.+.|.+. +++ +|+.
T Consensus       106 i~~-~~~~~~~~~~DvVI~a~D~------~~----~r~~l~~~~~~~~~~p-~I~~  149 (212)
T PRK08644        106 IDE-DNIEELFKDCDIVVEAFDN------AE----TKAMLVETVLEHPGKK-LVAA  149 (212)
T ss_pred             cCH-HHHHHHHcCCCEEEECCCC------HH----HHHHHHHHHHHhCCCC-EEEe
Confidence            544 5566788999999987532      11    224466788877 764 4433

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.87  E-value=0.16  Score=48.77  Aligned_cols=108  Identities=18%  Similarity=0.147  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------Hh-h----hhhhhhhhhc--cceEEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------AA-S----YKILSKEELK--RLNAVE   66 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~~-~----~~~~~~~~~~--rl~vv~   66 (427)
                      ...+|+|.|+ |.+|+.++..|.+.|. ++++++++.-....|.+.        |. +    ...+... .+  +++.+.
T Consensus        23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i-np~v~i~~~~  100 (240)
T TIGR02355        23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQI-NPHIAINPIN  100 (240)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHH-CCCcEEEEEe
Confidence            3468999998 8899999999999994 788777654221111100        00 0    0000000 12  233333


Q ss_pred             ecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           67 SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        67 gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ..+ +.+.+.+.+.++|+||.+....      .    .-..+-++|.+.+++ +|+.+
T Consensus       101 ~~i-~~~~~~~~~~~~DlVvd~~D~~------~----~r~~ln~~~~~~~ip-~v~~~  146 (240)
T TIGR02355       101 AKL-DDAELAALIAEHDIVVDCTDNV------E----VRNQLNRQCFAAKVP-LVSGA  146 (240)
T ss_pred             ccC-CHHHHHHHhhcCCEEEEcCCCH------H----HHHHHHHHHHHcCCC-EEEEE
Confidence            333 3456778899999999877532      1    224466888988875 44433

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=95.85  E-value=0.034  Score=55.74  Aligned_cols=34  Identities=24%  Similarity=0.231  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      ||+|.|.|+ |.+|..++..|.+.|++|++++|++
T Consensus         2 ~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~   35 (341)
T PRK08229          2 MARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR   35 (341)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence            578999997 9999999999999999999999964

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.85  E-value=0.056  Score=54.09  Aligned_cols=104  Identities=13%  Similarity=0.050  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHH-HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQE-LARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~-l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+||.|+|| |.+|+.++..|+..|. +|++++.+++.+.. ..+....   . ........+. + ..|.    +++.+
T Consensus         6 ~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~---~-~~~~~~~~I~-~-~~d~----~~l~~   74 (321)
T PTZ00082          6 RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHS---N-VIAGSNSKVI-G-TNNY----EDIAG   74 (321)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhh---h-hccCCCeEEE-E-CCCH----HHhCC
Confidence            468999996 9999999999999994 89999998875321 1110000   0 0000011222 1 1232    36899


Q ss_pred             cCEEEEccCCCCCCC----------CccccHHHHHHHHHHHHHcCCC
Q 044905           82 AGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +|+||.++|......          ....|..-...+++.+.+.+-+
T Consensus        75 aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~  121 (321)
T PTZ00082         75 SDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPN  121 (321)
T ss_pred             CCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999998654211          1233444556667777776655

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.85  E-value=0.092  Score=51.71  Aligned_cols=98  Identities=19%  Similarity=0.157  Sum_probs=62.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHh-cC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAI-GN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al-~g   81 (427)
                      ..+|+|.|++|.+|..+++.+...|.+|++++++.++...+...+..            .++..+-.+. ..+.... ++
T Consensus       140 ~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~------------~v~~~~~~~~~~~~~~~~~~~  207 (329)
T cd08250         140 GETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCD------------RPINYKTEDLGEVLKKEYPKG  207 (329)
T ss_pred             CCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCc------------eEEeCCCccHHHHHHHhcCCC
Confidence            45899999999999999999999999999999887766655444432            1222222221 2222222 46


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      +|.||++.|..           .....++.+...  .++|.+++.
T Consensus       208 vd~v~~~~g~~-----------~~~~~~~~l~~~--g~~v~~g~~  239 (329)
T cd08250         208 VDVVYESVGGE-----------MFDTCVDNLALK--GRLIVIGFI  239 (329)
T ss_pred             CeEEEECCcHH-----------HHHHHHHHhccC--CeEEEEecc
Confidence            89999887631           223344544433  467766544

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=95.82  E-value=0.05  Score=53.78  Aligned_cols=108  Identities=18%  Similarity=0.107  Sum_probs=63.4

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKV   85 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~V   85 (427)
                      |.|+|| |.+|..++..|+..|. +|++++++++.+........+.  .... ..... +... .|    .+.+.++|+|
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~--~~~~-~~~~~-I~~t-~d----~~~l~dADiV   70 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQA--APIL-GSDTK-VTGT-ND----YEDIAGSDVV   70 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHh--hhhc-CCCeE-EEEc-CC----HHHhCCCCEE
Confidence            579998 9999999999998886 9999999976542221100000  0000 01111 2211 23    2358999999


Q ss_pred             EEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           86 VVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        86 i~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |.++|......     ....|..-...+++.+.+..-+.++++.
T Consensus        71 Iit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~  114 (300)
T cd01339          71 VITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVV  114 (300)
T ss_pred             EEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            99998644311     1123444556667777776655555443

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.82  E-value=0.077  Score=53.11  Aligned_cols=73  Identities=18%  Similarity=0.160  Sum_probs=51.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~al~   80 (427)
                      ..+|+|+|+ |.+|...++.+...|. +|+++++++++.+.+...|++.            ++  |..+  ...+.....
T Consensus       170 g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~------------vi--~~~~~~~~~~~~~~g  234 (343)
T PRK09880        170 GKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADK------------LV--NPQNDDLDHYKAEKG  234 (343)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcE------------Ee--cCCcccHHHHhccCC
Confidence            468999996 9999999999999997 6889999988877666666652            22  2222  222222223


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.++|.
T Consensus       235 ~~D~vid~~G~  245 (343)
T PRK09880        235 YFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEECCCC
Confidence            48999999884

>PRK08328 hypothetical protein; Provisional

Probab=95.81  E-value=0.14  Score=48.80  Aligned_cols=109  Identities=17%  Similarity=0.147  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------Hhhh------hhhhhh-hhccceEEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------AASY------KILSKE-ELKRLNAVE   66 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~~~~------~~~~~~-~~~rl~vv~   66 (427)
                      ...+|+|.|+ |.+|++++..|...|. ++++++.+.-....+.+.        |...      ..+... ..-+++...
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~  104 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV  104 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            3568999998 8899999999999995 788887654322222110        0000      000000 112333444


Q ss_pred             ecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           67 SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        67 gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ..+ +.+.+...+.++|+||.+....      .    .-..+-++|+..|++ +|+.+
T Consensus       105 ~~~-~~~~~~~~l~~~D~Vid~~d~~------~----~r~~l~~~~~~~~ip-~i~g~  150 (231)
T PRK08328        105 GRL-SEENIDEVLKGVDVIVDCLDNF------E----TRYLLDDYAHKKGIP-LVHGA  150 (231)
T ss_pred             ccC-CHHHHHHHHhcCCEEEECCCCH------H----HHHHHHHHHHHcCCC-EEEEe
Confidence            455 4455777899999999877532      1    123355788888875 55443

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.79  E-value=0.065  Score=52.96  Aligned_cols=98  Identities=12%  Similarity=0.111  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.+.|.|+|+.| +|+-=++...+.|++|++++++..+.+ .+..+|.+             +...-..|++.+.++..-
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd-------------~fv~~~~d~d~~~~~~~~  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD-------------VFVDSTEDPDIMKAIMKT  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc-------------eeEEecCCHHHHHHHHHh
Confidence            456899999977 999989888899999999999986544 44557776             344444588888888888


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .|.++|++....     +.   ....++..++..|  .+|+++
T Consensus       247 ~dg~~~~v~~~a-----~~---~~~~~~~~lk~~G--t~V~vg  279 (360)
T KOG0023|consen  247 TDGGIDTVSNLA-----EH---ALEPLLGLLKVNG--TLVLVG  279 (360)
T ss_pred             hcCcceeeeecc-----cc---chHHHHHHhhcCC--EEEEEe
Confidence            888888776431     11   1133556665554  677775

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.78  E-value=0.074  Score=52.28  Aligned_cols=76  Identities=29%  Similarity=0.314  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-cCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-GNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-~g~   82 (427)
                      ..+|+|.|++|.+|..+++.+.+.|.+|+++++++++.+.+...++..            ++..+-...+.+.... .++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~------------v~~~~~~~~~~~~~~~~~~~  214 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKE------------VIPREELQEESIKPLEKQRW  214 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCE------------EEcchhHHHHHHHhhccCCc
Confidence            358999999999999999999999999999999988766665555431            2111101123333322 358


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |.||.+.|.
T Consensus       215 d~vld~~g~  223 (326)
T cd08289         215 AGAVDPVGG  223 (326)
T ss_pred             CEEEECCcH
Confidence            999988763

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.78  E-value=0.14  Score=50.02  Aligned_cols=109  Identities=15%  Similarity=0.161  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHH--------H------hhhhhhhhhhhccceEEE-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARL--------A------ASYKILSKEELKRLNAVE-   66 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~--------~------~~~~~~~~~~~~rl~vv~-   66 (427)
                      ...+|+|.|+ |.+|++++..|.+.| -++++++.+.-....+.+.        |      ..-.+. . -.+.+.+.. 
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~-~-INP~~~V~~i  105 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIR-Q-INPECRVTVV  105 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHH-h-HCCCcEEEEE
Confidence            4568999998 899999999999999 6888888653211111000        0      000000 0 012222222 


Q ss_pred             ecCCCHHHHHHHhc-CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           67 SNFDSAESIAKAIG-NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        67 gDl~D~~sl~~al~-g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      -+..+++.+...+. ++|+||.+....      .    .-..|.+.|+..+++ +|  ++.+
T Consensus       106 ~~~i~~e~~~~ll~~~~D~VIdaiD~~------~----~k~~L~~~c~~~~ip-~I--~~gG  154 (268)
T PRK15116        106 DDFITPDNVAEYMSAGFSYVIDAIDSV------R----PKAALIAYCRRNKIP-LV--TTGG  154 (268)
T ss_pred             ecccChhhHHHHhcCCCCEEEEcCCCH------H----HHHHHHHHHHHcCCC-EE--EECC
Confidence            23334566666664 699999988642      1    234588899998875 43  5444

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=95.77  E-value=0.11  Score=50.83  Aligned_cols=97  Identities=16%  Similarity=0.138  Sum_probs=62.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH---HHHHh-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAES---IAKAI-   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s---l~~al-   79 (427)
                      ..+|+|+|++|.+|..+++.+...|++|++++++....+.+...+..              ...|..+.+.   +.... 
T Consensus       167 ~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~  232 (342)
T cd08266         167 GETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGAD--------------YVIDYRKEDFVREVRELTG  232 (342)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC--------------eEEecCChHHHHHHHHHhC
Confidence            46899999999999999999999999999999887665544332221              1124444333   22323 


Q ss_pred             -cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           80 -GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        80 -~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                       .++|.+++++|..           ....+++.+...  .+++.+++..
T Consensus       233 ~~~~d~~i~~~g~~-----------~~~~~~~~l~~~--G~~v~~~~~~  268 (342)
T cd08266         233 KRGVDVVVEHVGAA-----------TWEKSLKSLARG--GRLVTCGATT  268 (342)
T ss_pred             CCCCcEEEECCcHH-----------HHHHHHHHhhcC--CEEEEEecCC
Confidence             2589999988741           223344554433  4677776443

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.74  E-value=0.044  Score=54.44  Aligned_cols=105  Identities=21%  Similarity=0.175  Sum_probs=66.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchH----HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAA----QELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~----~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +||.|+|| |++|+.++..|+.++  .+++.++.+..++    .+|.....-       .... ..+.+| .|    .+.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~-------~~~~-~~i~~~-~~----y~~   66 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAP-------LGSD-VKITGD-GD----YED   66 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchh-------ccCc-eEEecC-CC----hhh
Confidence            58999999 999999999998886  3899999885432    222211110       0001 123333 22    456


Q ss_pred             hcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           79 IGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++++|+|+.++|.... +.    -++.|..-...+.+...+.+-+-++++
T Consensus        67 ~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlV  116 (313)
T COG0039          67 LKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLV  116 (313)
T ss_pred             hcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            8999999999986543 21    345565556666777777766555544

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.74  E-value=0.06  Score=56.69  Aligned_cols=74  Identities=26%  Similarity=0.188  Sum_probs=50.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-H----HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-A----QELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~----~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      ..++|+|+|+ |.+|..+++.|.++|++|+++.++... .    ..+...++             .+..++-..      
T Consensus        15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv-------------~~~~~~~~~------   74 (480)
T PRK01438         15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGA-------------TVRLGPGPT------   74 (480)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCC-------------EEEECCCcc------
Confidence            3568999998 999999999999999999999866531 1    12222233             355444222      


Q ss_pred             HhcCcCEEEEccCCCCCCC
Q 044905           78 AIGNAGKVVVTIGPTEDGP   96 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~   96 (427)
                      ...++|.||.+.|..+..+
T Consensus        75 ~~~~~D~Vv~s~Gi~~~~~   93 (480)
T PRK01438         75 LPEDTDLVVTSPGWRPDAP   93 (480)
T ss_pred             ccCCCCEEEECCCcCCCCH
Confidence            2456899999988765433

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=95.73  E-value=0.056  Score=52.09  Aligned_cols=37  Identities=24%  Similarity=0.214  Sum_probs=30.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEE-EecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRA-GVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~a-l~R~~~   39 (427)
                      +|++|+|.|++|..|+.|++.+.+.+ +++.+ +.|.++
T Consensus         1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~   39 (266)
T COG0289           1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS   39 (266)
T ss_pred             CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence            46899999999999999999999876 66554 456554

>PRK10537 voltage-gated potassium channel; Provisional

Probab=95.72  E-value=0.083  Score=54.39  Aligned_cols=87  Identities=14%  Similarity=0.107  Sum_probs=62.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~   82 (427)
                      +.+|+|.|. |.+|+.+++.|.++|++|+++..+..  +....             ++..++.||.+|.+.|.++ ++.+
T Consensus       240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~-------------~g~~vI~GD~td~e~L~~AgI~~A  303 (393)
T PRK10537        240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLP-------------DDADLIPGDSSDSAVLKKAGAARA  303 (393)
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhcc-------------CCCcEEEeCCCCHHHHHhcCcccC
Confidence            357999997 89999999999999999998886521  22211             2345899999999998875 5789


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g  116 (427)
                      +.|+.+...      ...|    ..++..+++.+
T Consensus       304 ~aVI~~t~d------D~~N----l~ivL~ar~l~  327 (393)
T PRK10537        304 RAILALRDN------DADN----AFVVLAAKEMS  327 (393)
T ss_pred             CEEEEcCCC------hHHH----HHHHHHHHHhC
Confidence            999876642      1222    33555666665

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.70  E-value=0.062  Score=52.90  Aligned_cols=76  Identities=21%  Similarity=0.169  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHh-cC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAI-GN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al-~g   81 (427)
                      ..+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+...+.+.            ++..+-.| .+.+.... .+
T Consensus       144 g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~------------vi~~~~~~~~~~v~~~~~~g  211 (329)
T cd08294         144 GETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDA------------VFNYKTVSLEEALKEAAPDG  211 (329)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE------------EEeCCCccHHHHHHHHCCCC
Confidence            458999999999999999999999999999999988777776666541            22221112 22333322 36


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.+.|.
T Consensus       212 vd~vld~~g~  221 (329)
T cd08294         212 IDCYFDNVGG  221 (329)
T ss_pred             cEEEEECCCH
Confidence            8999988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN02256 arogenate dehydrogenase

Probab=95.69  E-value=0.097  Score=52.00  Aligned_cols=37  Identities=22%  Similarity=0.297  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      ++.+++|.|.|. |.+|..++..|.+.|++|++++|+.
T Consensus        33 ~~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~   69 (304)
T PLN02256         33 KSRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSD   69 (304)
T ss_pred             cCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECcc
Confidence            356789999995 9999999999999999999999886

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=95.69  E-value=0.16  Score=48.32  Aligned_cols=112  Identities=17%  Similarity=0.218  Sum_probs=75.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhh-----hhhhhhhhccceEEE---ecCCC--HHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASY-----KILSKEELKRLNAVE---SNFDS--AES   74 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~-----~~~~~~~~~rl~vv~---gDl~D--~~s   74 (427)
                      |+|.++|- |..|..+++.|+..||+|++.++++...+++...+++.     .++.....+|.-++-   +|++|  .+.
T Consensus         1 M~iGmiGL-GrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~~   79 (300)
T COG1023           1 MQIGMIGL-GRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGATGAASLDELVAKLSAPRIVWLMVPAGDITDAVIDD   79 (300)
T ss_pred             Ccceeecc-chhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCCccccCHHHHHHhcCCCcEEEEEccCCCchHHHHHH
Confidence            56888886 99999999999999999999999998777776655321     112222234444432   46766  456


Q ss_pred             HHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           75 IAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      |...+..-|+||-- |        +.|+..+++-.+.+.+.|+ ||+=+.+|+
T Consensus        80 la~~L~~GDivIDG-G--------NS~y~Ds~rr~~~l~~kgi-~flD~GTSG  122 (300)
T COG1023          80 LAPLLSAGDIVIDG-G--------NSNYKDSLRRAKLLAEKGI-HFLDVGTSG  122 (300)
T ss_pred             HHhhcCCCCEEEEC-C--------ccchHHHHHHHHHHHhcCC-eEEeccCCC
Confidence            66667777888752 2        2333455666667777888 677666554

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.68  E-value=0.11  Score=51.54  Aligned_cols=75  Identities=23%  Similarity=0.248  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..+|+|+|+ |.+|..+++.+...|.+ |++++++.++.+.+...+...            ++...-.+.+.+.+...  
T Consensus       164 g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~------------~i~~~~~~~~~~~~~~~~~  230 (339)
T cd08239         164 RDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADF------------VINSGQDDVQEIRELTSGA  230 (339)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE------------EEcCCcchHHHHHHHhCCC
Confidence            468999986 99999999999999988 999988887766655555531            22211112444555444  


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.68  E-value=0.1  Score=48.68  Aligned_cols=85  Identities=19%  Similarity=0.244  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecC---cchHHHH----HHHHh---h--hhhhhhh-hhccceEEEec
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPE---LGAAQEL----ARLAA---S--YKILSKE-ELKRLNAVESN   68 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~---~~~~~~l----~~~~~---~--~~~~~~~-~~~rl~vv~gD   68 (427)
                      ...+|+|.|+ |.+|+.++..|.+.|+ ++++++++   .+.+...    ...+.   +  ...+... ..-+++.+..+
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~~   98 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDEK   98 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeeee
Confidence            4568999998 8899999999999997 79999987   3322110    00000   0  0000000 01233444455


Q ss_pred             CCCHHHHHHHhcCcCEEEEcc
Q 044905           69 FDSAESIAKAIGNAGKVVVTI   89 (427)
Q Consensus        69 l~D~~sl~~al~g~d~Vi~~a   89 (427)
                      ++ .+.+.+++.++|.||.+.
T Consensus        99 i~-~~~~~~~~~~~DlVi~a~  118 (200)
T TIGR02354        99 IT-EENIDKFFKDADIVCEAF  118 (200)
T ss_pred             CC-HhHHHHHhcCCCEEEECC
Confidence            54 466788899999999873

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.68  E-value=0.067  Score=49.93  Aligned_cols=83  Identities=24%  Similarity=0.276  Sum_probs=54.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+|.|| |.+|.+.++.|++.|++|+++.++... +..+...            .++.+..-++..     ..+.+
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~------------~~i~~~~~~~~~-----~~l~~   70 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE------------GKIRWKQKEFEP-----SDIVD   70 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC------------CCEEEEecCCCh-----hhcCC
Confidence            4679999998 999999999999999999999876542 2333221            122343333332     23678


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHH
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQ  113 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~  113 (427)
                      +|.||.+.+.      .++|    ..+.+.|.
T Consensus        71 adlViaaT~d------~elN----~~i~~~a~   92 (202)
T PRK06718         71 AFLVIAATND------PRVN----EQVKEDLP   92 (202)
T ss_pred             ceEEEEcCCC------HHHH----HHHHHHHH
Confidence            9988876653      3344    44666663

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=95.66  E-value=0.043  Score=46.51  Aligned_cols=31  Identities=32%  Similarity=0.419  Sum_probs=27.3

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEec
Q 044905            6 TVFVAGATGQAGVRIAQTLLRE-GFSVRAGVP   36 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~-G~~V~al~R   36 (427)
                      +|.|+|++|.+|..++..|... ++++.++..
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~   32 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA   32 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence            5899999999999999999995 889988843

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.64  E-value=0.18  Score=51.26  Aligned_cols=112  Identities=14%  Similarity=0.036  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------H------hhhhhhhhhhhccceEEEe
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------A------ASYKILSKEELKRLNAVES   67 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~------~~~~~~~~~~~~rl~vv~g   67 (427)
                      ...+|+|.|+ |.+|+.++..|...|. ++++++.+.-....|.+.        |      ....+..-...-+++.+..
T Consensus        27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~~  105 (355)
T PRK05597         27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSVR  105 (355)
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEEe
Confidence            4568999998 8899999999999995 788887654111111000        0      0000000000113344445


Q ss_pred             cCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           68 NFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        68 Dl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      .++ .+.+...+.++|+||.+....      .    .-..+-++|.+.+++ +|+.++.+
T Consensus       106 ~i~-~~~~~~~~~~~DvVvd~~d~~------~----~r~~~n~~c~~~~ip-~v~~~~~g  153 (355)
T PRK05597        106 RLT-WSNALDELRDADVILDGSDNF------D----TRHLASWAAARLGIP-HVWASILG  153 (355)
T ss_pred             ecC-HHHHHHHHhCCCEEEECCCCH------H----HHHHHHHHHHHcCCC-EEEEEEec
Confidence            554 445567789999999887531      1    223366888988875 55554444

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.64  E-value=0.097  Score=49.92  Aligned_cols=111  Identities=18%  Similarity=0.189  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------Hh-hh----hhhhhh-hhccceEEEe
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------AA-SY----KILSKE-ELKRLNAVES   67 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~~-~~----~~~~~~-~~~rl~vv~g   67 (427)
                      ...+|+|.|+ |.+|+++++.|.+.|. ++++++.+.-....+.+.        |. ..    .-+..- ..-+++.+..
T Consensus        10 ~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~   88 (231)
T cd00755          10 RNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE   88 (231)
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee
Confidence            4568999998 8899999999999995 788887654211111100        00 00    000000 0112333444


Q ss_pred             cCCCHHHHHHHh-cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccc
Q 044905           68 NFDSAESIAKAI-GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNT  128 (427)
Q Consensus        68 Dl~D~~sl~~al-~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v  128 (427)
                      .++ ++.+...+ .++|+||.+....          ..-..+.+.|+..+++ +|  |+.+.
T Consensus        89 ~i~-~~~~~~l~~~~~D~VvdaiD~~----------~~k~~L~~~c~~~~ip-~I--~s~g~  136 (231)
T cd00755          89 FLT-PDNSEDLLGGDPDFVVDAIDSI----------RAKVALIAYCRKRKIP-VI--SSMGA  136 (231)
T ss_pred             ecC-HhHHHHHhcCCCCEEEEcCCCH----------HHHHHHHHHHHHhCCC-EE--EEeCC
Confidence            443 44455555 4699999887532          1335588999998875 33  65553

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.62  E-value=0.044  Score=49.69  Aligned_cols=55  Identities=22%  Similarity=0.301  Sum_probs=45.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|+|+++.+|..+++.|.++|.+|+++.|+.+                                  .+.+.+..+
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~----------------------------------~l~~~l~~a   88 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK----------------------------------NLKEHTKQA   88 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch----------------------------------hHHHHHhhC
Confidence            4579999999667899999999999999998888631                                  234567889


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+.+.
T Consensus        89 DiVIsat~~   97 (168)
T cd01080          89 DIVIVAVGK   97 (168)
T ss_pred             CEEEEcCCC
Confidence            999998875

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=95.61  E-value=0.098  Score=55.12  Aligned_cols=42  Identities=14%  Similarity=0.255  Sum_probs=37.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      |.+|.|+|. |..|+.++..|+++||+|++..|++++.+.+..
T Consensus         1 ~~~IgvIGL-G~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~   42 (470)
T PTZ00142          1 MSDIGLIGL-AVMGQNLALNIASRGFKISVYNRTYEKTEEFVK   42 (470)
T ss_pred             CCEEEEEeE-hHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            458999996 999999999999999999999999988776654

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.60  E-value=0.16  Score=48.78  Aligned_cols=107  Identities=17%  Similarity=0.174  Sum_probs=63.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------Hh-h----hhhhhhhh-hccceEEEe
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------AA-S----YKILSKEE-LKRLNAVES   67 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~~-~----~~~~~~~~-~~rl~vv~g   67 (427)
                      ...+|+|.|+ |.+|+.++..|...|. ++++++.+.-....|.+.        |. .    ...+...+ .-+++.+..
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~  109 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA  109 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            3568999998 9999999999999995 788887554222222110        00 0    00000000 113334444


Q ss_pred             cCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           68 NFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        68 Dl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                      .++ .+.+...+.++|+||.+....      .    .-..+-++|.+++++ +|+
T Consensus       110 ~i~-~~~~~~~~~~~DiVi~~~D~~------~----~r~~ln~~~~~~~ip-~v~  152 (245)
T PRK05690        110 RLD-DDELAALIAGHDLVLDCTDNV------A----TRNQLNRACFAAKKP-LVS  152 (245)
T ss_pred             cCC-HHHHHHHHhcCCEEEecCCCH------H----HHHHHHHHHHHhCCE-EEE
Confidence            443 455677889999999887431      1    223467888888864 443

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=95.56  E-value=0.048  Score=53.24  Aligned_cols=67  Identities=9%  Similarity=0.248  Sum_probs=48.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC----eEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF----SVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~----~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      .++|.++|+ |.+|.+++..|++.|+    +|++.+|++++++.+.. .++.             . .   .|.   .+.
T Consensus         2 ~~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~-------------~-~---~~~---~e~   60 (272)
T PRK12491          2 NKQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGIT-------------I-T---TNN---NEV   60 (272)
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcE-------------E-e---CCc---HHH
Confidence            458999995 9999999999999884    69999888876655543 2221             1 1   122   234


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      +..+|+||.+.-+
T Consensus        61 ~~~aDiIiLavkP   73 (272)
T PRK12491         61 ANSADILILSIKP   73 (272)
T ss_pred             HhhCCEEEEEeCh
Confidence            6789999998875

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=95.53  E-value=0.15  Score=49.95  Aligned_cols=113  Identities=14%  Similarity=0.204  Sum_probs=68.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|--+| .|..|++++.+|++.||.|++..|+.++.+++...|.+..--..+-.+.-.++..=+.|+......+-+-+
T Consensus        35 ~~~iGFIG-LG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v~~v~~g~~  113 (327)
T KOG0409|consen   35 KTRIGFIG-LGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDVKDVLLGKS  113 (327)
T ss_pred             cceeeEEe-eccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhhHHHhcCCC
Confidence            45677777 49999999999999999999999999999999887765322111212233344444455555555555544


Q ss_pred             EEEEccCCCCCC--CCccccHHHHHHHHHHHHHcCC
Q 044905           84 KVVVTIGPTEDG--PTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        84 ~Vi~~ag~~~~~--~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      .|+...-+....  .+..++-.-+..|-+++...+.
T Consensus       114 Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~  149 (327)
T KOG0409|consen  114 GVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGG  149 (327)
T ss_pred             cceeeccCCCceEEeccccCHHHHHHHHHHHHhCCC
Confidence            444422111111  1233444455666666666655

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=95.52  E-value=0.044  Score=55.21  Aligned_cols=76  Identities=17%  Similarity=0.177  Sum_probs=52.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEec-CCCH-HHHHHHh-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESN-FDSA-ESIAKAI-   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gD-l~D~-~sl~~al-   79 (427)
                      ..+|+|+|++|.+|..+++.+...|.+|++++++.++.+.+. ..+.+.            ++..+ -.+. +.+.... 
T Consensus       159 g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~------------vi~~~~~~~~~~~i~~~~~  226 (348)
T PLN03154        159 GDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE------------AFNYKEEPDLDAALKRYFP  226 (348)
T ss_pred             CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE------------EEECCCcccHHHHHHHHCC
Confidence            458999999999999999999999999999998887766554 455541            22211 1122 2233322 


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|++|.++|.
T Consensus       227 ~gvD~v~d~vG~  238 (348)
T PLN03154        227 EGIDIYFDNVGG  238 (348)
T ss_pred             CCcEEEEECCCH
Confidence            368999998873

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=95.48  E-value=0.046  Score=53.15  Aligned_cols=68  Identities=19%  Similarity=0.145  Sum_probs=43.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEE-EecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE--GFSVRA-GVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~--G~~V~a-l~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |++|.|.|. |.+|+.+++.|++.  ++++.+ ++|++++...+.... .             ..  -+.|.+   +++.
T Consensus         1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~-~-------------~~--~~~~~~---ell~   60 (265)
T PRK13304          1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLASKT-G-------------AK--ACLSID---ELVE   60 (265)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhc-C-------------Ce--eECCHH---HHhc
Confidence            479999996 99999999999986  466554 456665554443210 0             00  113333   3347


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+|+.++.+
T Consensus        61 ~~DvVvi~a~~   71 (265)
T PRK13304         61 DVDLVVECASV   71 (265)
T ss_pred             CCCEEEEcCCh
Confidence            78999988754

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.46  E-value=0.1  Score=48.47  Aligned_cols=103  Identities=15%  Similarity=0.130  Sum_probs=63.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHH-----------------------HHHHHHhhhhhhhhhh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQ-----------------------ELARLAASYKILSKEE   58 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~-----------------------~l~~~~~~~~~~~~~~   58 (427)
                      ...+|+|.|+ |.+|+++++.|...|. +++.++.+.-...                       .+...++.        
T Consensus        20 ~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~--------   90 (197)
T cd01492          20 RSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR--------   90 (197)
T ss_pred             HhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC--------
Confidence            3568999998 5599999999999995 6888875532111                       11111111        


Q ss_pred             hccceEEEecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccc
Q 044905           59 LKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNT  128 (427)
Q Consensus        59 ~~rl~vv~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v  128 (427)
                       -+++.....+.+  .....+.++|+||.+...          ......+-+.|++.+++ +++.++.+.
T Consensus        91 -v~i~~~~~~~~~--~~~~~~~~~dvVi~~~~~----------~~~~~~ln~~c~~~~ip-~i~~~~~G~  146 (197)
T cd01492          91 -VKVSVDTDDISE--KPEEFFSQFDVVVATELS----------RAELVKINELCRKLGVK-FYATGVHGL  146 (197)
T ss_pred             -CEEEEEecCccc--cHHHHHhCCCEEEECCCC----------HHHHHHHHHHHHHcCCC-EEEEEecCC
Confidence             133344444442  234567899999986542          11335567889999985 555555444

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.46  E-value=0.14  Score=50.04  Aligned_cols=76  Identities=21%  Similarity=0.257  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~--   80 (427)
                      ..+|+|+|++|.+|..+++.+...|.+|++++++.++.+.+...+..            .++...-.+ .+.+.....  
T Consensus       143 ~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~~~~~~~~~~~~  210 (324)
T cd08244         143 GDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGAD------------VAVDYTRPDWPDQVREALGGG  210 (324)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC------------EEEecCCccHHHHHHHHcCCC
Confidence            45899999999999999999999999999999988766555443332            122211112 233444443  


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|.|+++.|.
T Consensus       211 ~~d~vl~~~g~  221 (324)
T cd08244         211 GVTVVLDGVGG  221 (324)
T ss_pred             CceEEEECCCh
Confidence            58999998874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.46  E-value=0.1  Score=52.36  Aligned_cols=72  Identities=25%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec---CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH--HHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP---ELGAAQELARLAASYKILSKEELKRLNAVESNFDSA--ESIAK   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R---~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~--~sl~~   77 (427)
                      ...+|+|+|+ |.+|...++.+...|.+|++++|   ++.+.+.+...++.             .+  |..+.  .. ..
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~-------------~v--~~~~~~~~~-~~  234 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGAT-------------YV--NSSKTPVAE-VK  234 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCE-------------Ee--cCCccchhh-hh
Confidence            3468999996 99999999988889999999998   44455555555554             21  22221  11 12


Q ss_pred             HhcCcCEEEEccCC
Q 044905           78 AIGNAGKVVVTIGP   91 (427)
Q Consensus        78 al~g~d~Vi~~ag~   91 (427)
                      ...++|+||.++|.
T Consensus       235 ~~~~~d~vid~~g~  248 (355)
T cd08230         235 LVGEFDLIIEATGV  248 (355)
T ss_pred             hcCCCCEEEECcCC
Confidence            23578999999884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=95.42  E-value=0.072  Score=56.52  Aligned_cols=47  Identities=28%  Similarity=0.269  Sum_probs=41.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS   50 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~   50 (427)
                      ...+|+|+|+ |-+|...+..+...|..|+++++++++++.....|.+
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~  210 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAE  210 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCe
Confidence            4679999998 9999999999999999999999999887777666765

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.42  E-value=0.048  Score=47.77  Aligned_cols=76  Identities=14%  Similarity=0.137  Sum_probs=50.2

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVV   86 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~Vi   86 (427)
                      |+|.|+ |-+|..++..|.+.|++|+.+.|+. ..+.+...+.......   ............+.   ......+|.||
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~D~vi   72 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPD---GDETVQPPIVISAP---SADAGPYDLVI   72 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETT---EEEEEEEEEEESSH---GHHHSTESEEE
T ss_pred             CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecc---cceecccccccCcc---hhccCCCcEEE
Confidence            789998 9999999999999999999999998 6666666555421111   01111122223333   33467799999


Q ss_pred             EccC
Q 044905           87 VTIG   90 (427)
Q Consensus        87 ~~ag   90 (427)
                      .+.=
T Consensus        73 v~vK   76 (151)
T PF02558_consen   73 VAVK   76 (151)
T ss_dssp             E-SS
T ss_pred             EEec
Confidence            9764

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.40  E-value=0.097  Score=55.42  Aligned_cols=73  Identities=23%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|+|+|. |..|...++.|.+.|++|++.++++.....+...++.             ++.++. +    ...+.++|
T Consensus        12 ~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~-------------~~~~~~-~----~~~l~~~D   72 (488)
T PRK03369         12 GAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVA-------------TVSTSD-A----VQQIADYA   72 (488)
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCE-------------EEcCcc-h----HhHhhcCC
Confidence            468999996 9999999999999999999988765443333322322             433322 1    12356789


Q ss_pred             EEEEccCCCCCC
Q 044905           84 KVVVTIGPTEDG   95 (427)
Q Consensus        84 ~Vi~~ag~~~~~   95 (427)
                      .||.+.|.....
T Consensus        73 ~VV~SpGi~~~~   84 (488)
T PRK03369         73 LVVTSPGFRPTA   84 (488)
T ss_pred             EEEECCCCCCCC
Confidence            999998876433

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=95.40  E-value=0.037  Score=54.82  Aligned_cols=70  Identities=19%  Similarity=0.191  Sum_probs=49.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++|+|+| +|.+|..++..|.+.|+  +|++++|+++........+..             ...  ..+   ..+++.
T Consensus         5 ~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~-------------~~~--~~~---~~~~~~   65 (307)
T PRK07502          5 LFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLG-------------DRV--TTS---AAEAVK   65 (307)
T ss_pred             CCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCC-------------cee--cCC---HHHHhc
Confidence            346899999 59999999999999995  899999988765544332211             000  112   344578


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.++.+
T Consensus        66 ~aDvViiavp~   76 (307)
T PRK07502         66 GADLVILCVPV   76 (307)
T ss_pred             CCCEEEECCCH
Confidence            89999998865

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=95.39  E-value=0.036  Score=50.02  Aligned_cols=77  Identities=22%  Similarity=0.125  Sum_probs=53.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec--------------
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN--------------   68 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD--------------   68 (427)
                      .+.+|+|+|+ |.+|..-++.|...|++|+.+..++.....+......             .+..+              
T Consensus        19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~-------------~i~~~~~~~~~~~~~~~~~   84 (168)
T PF01262_consen   19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAY-------------FIEVDYEDHLERKDFDKAD   84 (168)
T ss_dssp             -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTE-------------ESEETTTTTTTSB-CCHHH
T ss_pred             CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCc-------------eEEEcccccccccccchhh
Confidence            3568999996 9999999999999999999999988766555443332             22222              


Q ss_pred             -----CCCHHHHHHHhcCcCEEEEccCCCC
Q 044905           69 -----FDSAESIAKAIGNAGKVVVTIGPTE   93 (427)
Q Consensus        69 -----l~D~~sl~~al~g~d~Vi~~ag~~~   93 (427)
                           ......+.+.+..+|.||.++-.+.
T Consensus        85 ~~~~~~~~~~~f~~~i~~~d~vI~~~~~~~  114 (168)
T PF01262_consen   85 YYEHPESYESNFAEFIAPADIVIGNGLYWG  114 (168)
T ss_dssp             CHHHCCHHHHHHHHHHHH-SEEEEHHHBTT
T ss_pred             hhHHHHHhHHHHHHHHhhCcEEeeecccCC
Confidence                 1124567777888999998665544

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.37  E-value=0.1  Score=55.10  Aligned_cols=75  Identities=28%  Similarity=0.322  Sum_probs=51.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHH-HHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQEL-ARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l-~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++++|+|.|. |..|..+++.|++.|+.|++.+++......+ ...++.             +..+.. +.+    -+.+
T Consensus        14 ~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~-------------~~~~~~-~~~----~~~~   74 (473)
T PRK00141         14 LSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVA-------------DISTAE-ASD----QLDS   74 (473)
T ss_pred             cCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcE-------------EEeCCC-chh----HhcC
Confidence            4578999996 9999999999999999999999876543322 222332             443321 122    2467


Q ss_pred             cCEEEEccCCCCCCC
Q 044905           82 AGKVVVTIGPTEDGP   96 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~   96 (427)
                      +|.||.+.|.....+
T Consensus        75 ~d~vV~Spgi~~~~p   89 (473)
T PRK00141         75 FSLVVTSPGWRPDSP   89 (473)
T ss_pred             CCEEEeCCCCCCCCH
Confidence            899999888765433

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.34  E-value=0.12  Score=51.02  Aligned_cols=79  Identities=16%  Similarity=0.137  Sum_probs=51.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc---hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG---AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~---~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .++++|+|| |..+++++-.|...|. +|+++.|+..   +++.+......        .....+...++.+.+.+...+
T Consensus       124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~--------~~~~~~~~~~~~~~~~l~~~~  194 (288)
T PRK12749        124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE--------NTDCVVTVTDLADQQAFAEAL  194 (288)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh--------ccCceEEEechhhhhhhhhhc
Confidence            468999998 7779999999999995 8999999964   55555432111        000012223333333455567


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||++...
T Consensus       195 ~~aDivINaTp~  206 (288)
T PRK12749        195 ASADILTNGTKV  206 (288)
T ss_pred             ccCCEEEECCCC
Confidence            789999997643

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=95.32  E-value=0.07  Score=52.98  Aligned_cols=33  Identities=24%  Similarity=0.507  Sum_probs=28.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPE   37 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~   37 (427)
                      .+|.|.||||+.|..|++.|+... .++..+..+
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~   35 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPD   35 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecc
Confidence            489999999999999999999986 677777644

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.32  E-value=0.18  Score=45.84  Aligned_cols=101  Identities=20%  Similarity=0.252  Sum_probs=58.6

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH-------HHh-h----hhhhhhh-hhccceEEEecCCC
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR-------LAA-S----YKILSKE-ELKRLNAVESNFDS   71 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~-------~~~-~----~~~~~~~-~~~rl~vv~gDl~D   71 (427)
                      +|+|.|+ |.+|+.++..|.+.|. +++.++.+.-....+.+       .+. +    ...+... ..-+++.+...++ 
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~-   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID-   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence            5899997 8999999999999997 69999877511111100       000 0    0000000 0123334444543 


Q ss_pred             HHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCC
Q 044905           72 AESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVG  118 (427)
Q Consensus        72 ~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk  118 (427)
                      .+.+.+.+.++|+||.+....      .    .-..+.+.+.+. +++
T Consensus        79 ~~~~~~~l~~~DlVi~~~d~~------~----~r~~i~~~~~~~~~ip  116 (174)
T cd01487          79 ENNLEGLFGDCDIVVEAFDNA------E----TKAMLAESLLGNKNKP  116 (174)
T ss_pred             hhhHHHHhcCCCEEEECCCCH------H----HHHHHHHHHHHHCCCC
Confidence            356677899999999875321      1    113366776666 764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.32  E-value=0.24  Score=50.61  Aligned_cols=108  Identities=21%  Similarity=0.240  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHH--------H------hhhhhhhhhh-hccceEEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARL--------A------ASYKILSKEE-LKRLNAVE   66 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~--------~------~~~~~~~~~~-~~rl~vv~   66 (427)
                      ...+|+|.|+ |.+|+.++..|...|. ++++++.+.-....|.+.        |      ... -+...+ .-+++.+.
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~-~l~~~np~v~i~~~~  117 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAE-RLKEIQPDIRVNALR  117 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHH-HHHHHCCCCeeEEee
Confidence            4568999998 8899999999999995 888888663211111100        0      000 000000 11334444


Q ss_pred             ecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           67 SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        67 gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ..++ .+.+.+.+.++|+||.+....      .    .-..+-++|...+++ +|+.+
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~Dn~------~----~r~~in~~~~~~~iP-~v~~~  163 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSDSF------A----TKFLVADAAEITGTP-LVWGT  163 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCCCH------H----HHHHHHHHHHHcCCC-EEEEE
Confidence            5554 456677899999999877532      1    223456788888875 44443

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.32  E-value=0.099  Score=55.32  Aligned_cols=43  Identities=16%  Similarity=0.224  Sum_probs=38.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      .+++|.++|- |..|+.+++.|+++||+|++..|++++.+.+..
T Consensus         5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~   47 (493)
T PLN02350          5 ALSRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVE   47 (493)
T ss_pred             CCCCEEEEee-HHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHH
Confidence            4568999995 999999999999999999999999988777654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.31  E-value=0.088  Score=53.83  Aligned_cols=70  Identities=20%  Similarity=0.202  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      +|+|+|+|+ |..|+.++..+.+.|++|++++.++......   ...            ..+..|..|.+.+.++++  +
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~ad------------~~~~~~~~d~~~l~~~~~~~~   75 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VAH------------RSHVIDMLDGDALRAVIEREK   75 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hhh------------heEECCCCCHHHHHHHHHHhC
Confidence            568999997 8999999999999999999999887532111   011            156778889999988887  7


Q ss_pred             cCEEEEcc
Q 044905           82 AGKVVVTI   89 (427)
Q Consensus        82 ~d~Vi~~a   89 (427)
                      +|.|+...
T Consensus        76 id~vi~~~   83 (395)
T PRK09288         76 PDYIVPEI   83 (395)
T ss_pred             CCEEEEee
Confidence            99888643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	427
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	5e-13
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	5e-12
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	1e-08
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-08
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-08
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-08
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-08
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	2e-07
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	8e-07
3lvg_D	190	LCB, clathrin light chain B; SELF assembly, coated	9e-07
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	1e-06
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	2e-06
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	6e-06
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	9e-06
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	9e-06
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	9e-06
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	1e-05
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-05
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	5e-05
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	3e-04

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 66.6 bits (163), Expect = 5e-13
 Identities = 29/217 (13%), Positives = 66/217 (30%), Gaps = 29/217 (13%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
            + + GATGQ G+      ++ G+ V            L R ++               V
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTV----------LVRDSSRLPSEGPRPAH---VV 51

Query: 66  ESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYD 125
             +   A  + K +     V+V +G   D   + V +  A  ++ A +  GV  V     
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC-- 109

Query: 126 GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIK-TSLTEDFSPE 184
             T+A   ++                         + + E+ + Y  +    + +     
Sbjct: 110 --TSAFLLWDPTKVPPRLQAVTDDHI------RMHKVLRESGLKYVAVMPPHIGDQ---P 158

Query: 185 SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTA 221
            +    V+ +    +    ++K  +   +    +   
Sbjct: 159 LTGAYTVTLDGRGPSR--VISKHDLGHFMLRCLTTDE 193

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 64.4 bits (157), Expect = 5e-12
 Identities = 27/225 (12%), Positives = 65/225 (28%), Gaps = 32/225 (14%)

Query: 6   TVFVAGATGQAGVRIAQTLL-REGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA 64
            V + GA GQ    +   L  ++         +     +                     
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------------TNSQI 71

Query: 65  VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY 124
           +  +  +  ++ +A+     V   +   +           A  VI A +   V  +  + 
Sbjct: 72  IMGDVLNHAALKQAMQGQDIVYANLTGEDLDI-------QANSVIAAMKACDVKRLIFV- 123

Query: 125 DGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIK-TSLTEDFSP 183
                +   Y+ + G    +NN                +  + + YT ++   LT++   
Sbjct: 124 ----LSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDE--D 177

Query: 184 ESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVV 228
              Y +    E         V++  +A+L+ D+         + +
Sbjct: 178 IIDYELTSRNEPFKGT---IVSRKSVAALITDIIDKPEKHIGENI 219

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 59.7 bits (145), Expect = 3e-10
 Identities = 55/325 (16%), Positives = 102/325 (31%), Gaps = 53/325 (16%)

Query: 6   TVFVAGATGQAGVRIAQTLLREG-FSVRAGV--PELGAAQELARLAASYKILSKEELKRL 62
            V V G TG  G  +A+TLL +G F VR     P   AA+EL    A        E+   
Sbjct: 7   LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGA--------EV--- 55

Query: 63  NAVESNFDSAESIAKAIGNAGKV-VVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA 121
             V+ + D    +  A+  A    +VT          EV       +   A+  G+ +  
Sbjct: 56  --VQGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQ--GKLLADLARRLGLHY-- 109

Query: 122 IIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK------VIETDVSYTFIKT 175
           ++Y                S   N        L    F  K        +  V  T ++ 
Sbjct: 110 VVY----------------SGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRL 153

Query: 176 S-----LTEDFSPE--SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVV 228
                 L   F P+        + +  + D     ++ S +  +V  +         + +
Sbjct: 154 PCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNI 213

Query: 229 KVFTDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLE 288
            + T     A     L +      +    A+   ++  +     A + A      A + +
Sbjct: 214 GLSTC-RHTAEEYAALLTKHT--RKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPD 270

Query: 289 EEVKKLSEQEAKAASLAEEAQEKAD 313
            +++       KA +L +  ++   
Sbjct: 271 RDIELTLRLNPKALTLDQWLEQHKG 295

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 60.6 bits (146), Expect = 6e-10
 Identities = 53/390 (13%), Positives = 110/390 (28%), Gaps = 128/390 (32%)

Query: 92  TEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRN 151
            +D P S +S  +            + H   I       + T  +               
Sbjct: 38  VQDMPKSILSKEE------------IDH---IIMSKDAVSGTLRLFW--------TLLSK 74

Query: 152 QPLTVPEFLQKVIETDVSYTFIKTSL-TEDFSPESSYNVVVSAEASVDAND------YKV 204
           Q   V +F+++V+  +  Y F+ + + TE   P     + +  +     ND      Y V
Sbjct: 75  QEEMVQKFVEEVLRIN--YKFLMSPIKTEQRQPSMMTRMYIE-QRDRLYNDNQVFAKYNV 131

Query: 205 A------------------------------KSQIASLVADVFSNTAVAENKVVKVF--- 231
           +                              K+    +  DV  +  V      K+F   
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT---WVALDVCLSYKVQCKMDFKIFWLN 188

Query: 232 ----TDPSAPARRVDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKL 287
                 P      + +L   I  D    + ++  +  K    +                +
Sbjct: 189 LKNCNSPETVLEMLQKLLYQI--DPNWTSRSDHSSNIKLRIHS----------------I 230

Query: 288 EEEVKKLSEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQ----IT 343
           + E+++L + +     L         V    +  + +         +W+ F+      +T
Sbjct: 231 QAELRRLLKSKPYENCL--------LV----LLNVQNAK-------AWNAFNLSCKILLT 271

Query: 344 TAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQIN 403
           T  ++ TD +       +     + TL  T   VK    K   +    ++LP+ +    N
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTL--TPDEVKSLLLK--YLDCRPQDLPR-EVLTTN 326

Query: 404 ESKPEVRKAFGGLFQQETI------YVDDD 427
              P          +          +V+ D
Sbjct: 327 ---PRRLSIIAESIRDGLATWDNWKHVNCD 353

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 44/243 (18%), Positives = 92/243 (37%), Gaps = 35/243 (14%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           +F+ G+TG+ G  + ++L    + + A           AR           +   + AV 
Sbjct: 3   IFIVGSTGRVGKSLLKSLSTTDYQIYA----------GARKVE-----QVPQYNNVKAVH 47

Query: 67  SNFD-SAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYD 125
            + D + E +AK +     ++   G         V    A +++QAA+ A V    ++  
Sbjct: 48  FDVDWTPEEMAKQLHGMDAIINVSGSGGKSLLK-VDLYGAVKLMQAAEKAEVKRFILL-- 104

Query: 126 GNTTAASTYNVLDGISSFFNNLFSRNQP-LTVPEFLQKVIETDVSYTFIK-TSLTEDFSP 183
              +   +      I + F+ L            +L K  ET++ YT I+  +LTE+   
Sbjct: 105 ---STIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTK--ETNLDYTIIQPGALTEE--- 156

Query: 184 ESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDE 243
           E++  + ++ E S            +A  + ++      +  KV+ +    +A    ++ 
Sbjct: 157 EATGLIDINDEVSA-----SNTIGDVADTIKELVMTDH-SIGKVISMHNGKTAIKEALES 210

Query: 244 LFS 246
           L  
Sbjct: 211 LLE 213

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 54.3 bits (131), Expect = 1e-08
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 17/120 (14%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           V V GA G+    +   L  +G    A V       EL    AS  +++           
Sbjct: 24  VLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVA----------- 72

Query: 67  SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSD---AFQVIQAAQLAGVGHVAII 123
              +  E  + A  +   VV   G        +    D   A + IQ A+  G+    ++
Sbjct: 73  ---NLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMV 129

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 37/270 (13%), Positives = 81/270 (30%), Gaps = 46/270 (17%)

Query: 3   DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELK 60
           +  TV V GA+G+ G  + + L      F  +  V      +++                
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--------------G 48

Query: 61  RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQ------------- 107
             +    +   A+SI  A      +V+              T                  
Sbjct: 49  EADVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQV 108

Query: 108 -------VIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL 160
                   I AA++AGV H+ ++    +   +  +         N L  +       +  
Sbjct: 109 DWIGQKNQIDAAKVAGVKHIVVV---GSMGGTNPDHPLNKLGNGNILVWKR------KAE 159

Query: 161 QKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT 220
           Q + ++   YT I+     D        +V   +  +  +   V ++ +A +        
Sbjct: 160 QYLADSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFE 219

Query: 221 AVAENKVVKVFTDPSAPARRVDELFSAIAE 250
             A+NK   + + P   +    +  +  ++
Sbjct: 220 E-AKNKAFDLGSKPEGTSTPTKDFKALFSQ 248

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 30/176 (17%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA- 64
            V + G TG  G RI    +  G               L R      I   + L      
Sbjct: 6   RVLIVGGTGYIGKRIVNASISLGHPTYV----------LFRPEVVSNIDKVQMLLYFKQL 55

Query: 65  ----VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
               +E++ D  + +  A+     V+  +     G        +  ++++A + AG    
Sbjct: 56  GAKLIEASLDDHQRLVDALKQVDVVISALA----GGVLSHHILEQLKLVEAIKEAGNIKR 111

Query: 121 AIIYD-GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKT 175
            +  + G       + +  G  +F +            +  + +    + YT++ +
Sbjct: 112 FLPSEFGMDPDIMEHALQPGSITFIDKR----------KVRRAIEAASIPYTYVSS 157

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 15/116 (12%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
            + + GA+G  G  +    L  GF V A          + R     KI +    + L   
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTA----------VVRHPEKIKIEN----EHLKVK 51

Query: 66  ESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQ-VIQAAQLAGVGHV 120
           +++  S + + +    A  V+    P  + P     T   +  +I   + AGV   
Sbjct: 52  KADVSSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRF 107

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 29/216 (13%)

Query: 6   TVFVAGATGQAGVRIAQTLL-REGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA 64
            + + GA GQ    +  TLL      +              R   +       + +R+  
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITL----------YGRQLKTRIPPEIIDHERVTV 56

Query: 65  VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY 124
           +E +F +   + +A+ NA  V V    +     S         +++A     +  V  + 
Sbjct: 57  IEGSFQNPGXLEQAVTNAEVVFVGAMESGSDMAS---------IVKALSRXNIRRVIGV- 106

Query: 125 DGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIE-TDVSYTFIKTSLTEDFSP 183
               + A            +         +      + V+  ++++YT ++ +   +   
Sbjct: 107 ----SMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYNDPE 162

Query: 184 ESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN 219
            + Y ++       DA   +V++  +   + D+   
Sbjct: 163 XTDYELIPEGAQFNDA---QVSREAVVKAIFDILHA 195

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 49.5 bits (118), Expect = 8e-07
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA- 64
            + + GATG  G  +A+  L  G      V      +E    + S K    E  K   A 
Sbjct: 6   RILLIGATGYIGRHVAKASLDLGHPTFLLV------RESTASSNSEKAQLLESFKASGAN 59

Query: 65  -VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
            V  + D   S+ +A+ N   V+ T+G  +              +I+A +  G       
Sbjct: 60  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIE--------SQVNIIKAIKEVGTVKRFFP 111

Query: 124 YD 125
            +
Sbjct: 112 SE 113

>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190

 Score = 48.2 bits (114), Expect = 9e-07
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 248 IAEDGRRAAYAEALAKEKAEKEARI----AAEKAREA---AEAATKLEEEVKKLSEQEAK 300
           IA+  R     E++ K + E+  R+    AA K  E     +A   LEE  ++ SEQ  K
Sbjct: 74  IAQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEK 133

Query: 301 AASLAEEAQEK 311
                  A + 
Sbjct: 134 NKINNRIADKA 144

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 15/119 (12%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA- 64
            + + G TG  G  I    ++ G    A V +   A          K    +  + L   
Sbjct: 4   KILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA-----NPETKEELIDNYQSLGVI 58

Query: 65  -VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI 122
            +E + +  E++ KAI     V+   G         +   D  ++I+A + AG      
Sbjct: 59  LLEGDINDHETLVKAIKQVDIVICAAGR--------LLIEDQVKIIKAIKEAGNVKKFF 109

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 48.4 bits (115), Expect = 2e-06
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 21/122 (17%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA- 64
            + + G TG  G  + +  L+ G                 R   S K    +E + L A 
Sbjct: 13  KILIFGGTGYIGNHMVKGSLKLGHPTYV----------FTR-PNSSKTTLLDEFQSLGAI 61

Query: 65  -VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
            V+   D  E + + +     V+  +   +          D F++++A ++AG     + 
Sbjct: 62  IVKGELDEHEKLVELMKKVDVVISALAFPQ--------ILDQFKILEAIKVAGNIKRFLP 113

Query: 124 YD 125
            D
Sbjct: 114 SD 115

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 47.0 bits (111), Expect = 6e-06
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA-- 64
           V +AGATG  G  +A   L                       +  K    + L+   A  
Sbjct: 13  VLIAGATGFIGQFVATASLDAHRPTYILA--------RPGPRSPSKAKIFKALEDKGAII 64

Query: 65  VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI 122
           V    +  E++ K +      +V      +    +++      +++A +  G     +
Sbjct: 65  VYGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIA------LVKAMKAVGTIKRFL 116

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 18/117 (15%), Positives = 32/117 (27%), Gaps = 15/117 (12%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           + V GATG+AG  I     R G  V A          + R           +        
Sbjct: 3   IAVLGATGRAGSAIVAEARRRGHEVLA----------VVRDPQKA-----ADRLGATVAT 47

Query: 67  SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
              +        + +   VV  +          +    A  ++   + +    V I+
Sbjct: 48  LVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 45.4 bits (107), Expect = 9e-06
 Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 18/117 (15%)

Query: 7   VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           + + GATG+AG RI +     G  V A V   G   +  +               +N ++
Sbjct: 3   IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHK--------------DINILQ 48

Query: 67  SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
              D  +     + +   VV   G + D     V++ D   +I          + ++
Sbjct: 49  --KDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDH--LISVLNGTVSPRLLVV 101

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 46.1 bits (110), Expect = 9e-06
 Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 18/118 (15%)

Query: 6   TVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLN 63
           ++ V GATGQ G  + Q LL++     + A V  +  A  LA                  
Sbjct: 2   SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVE------------- 48

Query: 64  AVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA 121
               +++  ES+ KA     K++  I       T  +        ++AA+ AGV H+A
Sbjct: 49  VRHGDYNQPESLQKAFAGVSKLLF-ISGPHYDNTLLIVQHANV--VKAARDAGVKHIA 103

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 14/117 (11%), Positives = 32/117 (27%), Gaps = 12/117 (10%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
            + + G TG  G  + +  L                       +S ++  +     +  +
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFI----YARPLTPDSTPSSVQLREEFRSMGVTII 61

Query: 66  ESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI 122
           E   +  E +   +     V+  +             S    +I A + AG     +
Sbjct: 62  EGEMEEHEKMVSVLKQVDIVISALPFP--------MISSQIHIINAIKAAGNIKRFL 110

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 29/123 (23%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGV--PELGAAQELARLAASYKILSKEELKRLN 63
           T+ V GATG+ G  + +     G  VRA V   +   A+EL  +                
Sbjct: 7   TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIP--------------- 51

Query: 64  AVE----SNFDSAESIAKAIGNAGKV-VVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-V 117
            V        ++   +      A    + T     D    E++      +  AA+ AG +
Sbjct: 52  NVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGD----EIAI--GKDLADAAKRAGTI 105

Query: 118 GHV 120
            H 
Sbjct: 106 QHY 108

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 17/117 (14%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARLAASYKILSKEELKRLNA 64
            + + GATG  G  I    +         GV  +    +  R   S              
Sbjct: 2   NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVS-------------V 48

Query: 65  VESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA 121
            + ++ + ES+ +A      VV                 +   ++ AA+ +GV H+ 
Sbjct: 49  RQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFK---RIPEVENLVYAAKQSGVAHII 102

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 20/115 (17%)

Query: 9   VAGATGQAGVRIAQTLLR--EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
           + GATGQ G  + ++L++      + A V     AQ LA    +               +
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGIT-------------VRQ 50

Query: 67  SNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA 121
           +++    ++  A+    K+++           +        VI AA+ AGV  +A
Sbjct: 51  ADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRN-----VINAAKAAGVKFIA 100

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	427
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.96
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.95
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.95
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.94
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.94
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.94
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.94
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.94
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.94
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.93
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.93
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.93
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.93
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.92
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.92
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.92
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.92
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.92
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.91
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.91
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.91
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.91
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.9
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.9
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.9
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.9
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.89
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.89
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.89
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.89
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.89
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.89
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.89
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.89
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.89
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.89
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.89
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.89
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.89
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.89
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.88
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.88
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.88
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.88
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.88
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.87
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.87
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.87
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.87
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.86
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.86
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.86
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.84
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.84
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.83
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.81
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.81
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.8
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.79
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.79
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.79
1spx_A	278	Short-chain reductase family member (5L265); paral	99.79
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.79
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.78
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.78
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.77
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.77
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.77
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.77
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.77
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.77
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.76
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.76
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.76
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.76
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.76
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.76
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.76
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.76
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.76
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.76
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.76
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.76
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.76
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.76
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.76
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.76
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.75
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.75
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.75
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.75
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.75
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.75
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.75
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.75
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.75
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.75
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.75
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.75
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.75
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.75
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.74
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.74
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.74
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.74
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.74
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.74
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.74
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.74
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.74
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.74
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.74
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.74
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.74
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.73
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.73
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.73
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.73
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.73
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.73
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.73
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.73
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.73
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.73
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.73
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.73
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.73
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.73
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.73
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.73
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.73
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.72
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.72
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.72
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.72
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.72
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.72
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.72
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.72
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.72
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.72
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.72
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.72
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.72
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.72
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.72
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.71
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.71
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.71
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.71
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.71
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.71
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.71
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.71
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.71
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.71
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.71
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.71
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.71
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.71
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.71
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.71
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.7
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.7
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.7
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.7
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.7
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.7
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.7
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.7
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.7
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.7
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.7
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.7
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.7
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.69
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.69
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.69
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.69
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.69
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.69
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.69
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.69
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.69
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.68
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.68
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.68
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.68
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.68
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.68
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.68
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.68
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.68
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.68
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.68
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.67
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.67
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.67
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.67
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.67
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.67
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.67
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.67
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.67
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.66
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.66
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.66
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.66
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.66
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.66
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.66
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.66
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.66
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.66
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.66
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.66
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.65
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.65
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.65
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.65
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.65
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.65
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.64
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.64
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.64
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.64
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.63
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.63
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.63
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.63
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.63
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.63
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.61
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.61
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.61
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.61
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.61
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.6
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.6
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.6
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.6
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.59
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.58
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.58
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.57
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.57
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.56
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.56
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.54
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.53
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.52
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.51
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.51
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.51
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.49
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.48
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.47
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.47
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.43
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.41
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.4
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.39
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.36
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.35
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.27
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.23
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.21
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.16
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.15
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.05
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.04
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.02
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.99
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.98
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.91
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.87
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.87
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.79
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.77
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.72
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.72
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.71
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.7
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.68
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.64
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.63
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.59
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.59
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.58
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.55
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.54
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.52
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.46
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.42
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.36
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.35
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.29
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.24
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.08
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.06
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.03
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.02
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.87
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	97.87
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	97.81
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.81
1lnq_A	336	MTHK channels, potassium channel related protein;	97.78
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	97.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.73
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.65
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.62
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.59
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	97.59
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.58
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.56
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.55
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.52
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.51
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.51
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.51
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.48
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.47
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.47
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.46
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	97.46
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.42
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.41
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.41
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.4
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.39
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.39
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.38
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.38
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.37
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.36
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.32
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.32
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.3
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.29
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.29
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.27
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.26
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.26
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.26
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.26
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.24
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.23
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.23
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.21
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.21
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.19
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.19
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.18
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.17
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.17
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.17
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.16
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.15
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.14
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.13
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.1
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.09
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.09
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	97.09
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.08
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.08
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.07
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.05
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.04
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.03
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.02
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.02
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.02
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.0
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.99
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.99
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.99
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	96.98
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.97
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.95
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.95
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	96.95
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.95
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.95
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.94
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.92
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	96.91
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.91
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	96.91
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	96.9
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	96.9
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.89
2duw_A	145	Putative COA-binding protein; ligand binding prote	96.89
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.87
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	96.86
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.86
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.84
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	96.83
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.82
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.8
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.78
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.77
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.76
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	96.75
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	96.75
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	96.75
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.74
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	96.72
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	96.72
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	96.72
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.7
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	96.7
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	96.69
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.69
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.68
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.68
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.68
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	96.67
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	96.67
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.66
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	96.66
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.65
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.65
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	96.65
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.64
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.64
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	96.64
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.63
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.63
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	96.62
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	96.62
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.62
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	96.6
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	96.6
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.59
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.59
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	96.59
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.58
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.57
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.57
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	96.56
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.56
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	96.55
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.54
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	96.54
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	96.54
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.54
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	96.54
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	96.53
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.52
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	96.51
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.51
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.49
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	96.48
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.44
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.43
4ezb_A	317	Uncharacterized conserved protein; structural geno	96.41
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.41
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.4
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	96.39
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	96.37
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.37

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.96  E-value=1.4e-28  Score=229.40  Aligned_cols=216  Identities=13%  Similarity=0.145  Sum_probs=159.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ||+|+||||||++|++|++.|+++|++|++++|++++...+              ..+++++.+|++|.+++.++++++|
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~~~Dl~d~~~~~~~~~~~d   69 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------------NEHLKVKKADVSSLDEVCEVCKGAD   69 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------------CTTEEEECCCTTCHHHHHHHHTTCS
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------------cCceEEEEecCCCHHHHHHHhcCCC
Confidence            57999999999999999999999999999999997653222              1355689999999999999999999


Q ss_pred             EEEEccCCCCCCC-CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           84 KVVVTIGPTEDGP-TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        84 ~Vi~~ag~~~~~~-~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      +|||++|+....+ .+++|+.++.+++++|++.++++|||+||.+++.+.........+....+.|+..+ ...|.+++.
T Consensus        70 ~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK-~~~e~~~~~  148 (227)
T 3dhn_A           70 AVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVK-ALGEFYLNF  148 (227)
T ss_dssp             EEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHH-HHHHHHHHT
T ss_pred             EEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHH-HHHHHHHHH
Confidence            9999998764432 57889999999999999999999999999886544332211122222334555544 457777777


Q ss_pred             Hh-cCCCeEEEEeCCC-CCCCCCCCccceEEeccc--ccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCC
Q 044905          163 VI-ETDVSYTFIKTSL-TEDFSPESSYNVVVSAEA--SVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAP  237 (427)
Q Consensus       163 l~-~~gl~~tilRPG~-~~~~~~~~~~~i~~~~~~--~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~  237 (427)
                      +. +.+++|+++|||. +++....  ..+......  ....+.+++|++|+|++++.++.++ ...|++|++++++..+
T Consensus       149 ~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~-~~~g~~~~~~~~~~~~  224 (227)
T 3dhn_A          149 LMKEKEIDWVFFSPAADMRPGVRT--GRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHP-KHHQERFTIGYLEHHH  224 (227)
T ss_dssp             GGGCCSSEEEEEECCSEEESCCCC--CCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSC-CCCSEEEEEECCSCCC
T ss_pred             HhhccCccEEEEeCCcccCCCccc--cceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCc-cccCcEEEEEeehhcc
Confidence            77 7899999999984 4332221  111221111  1122347999999999999999876 5689999999998443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.95  E-value=3.9e-27  Score=233.80  Aligned_cols=244  Identities=11%  Similarity=0.053  Sum_probs=171.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+|+|||||||||||++|++.|+++|++|++++|+..... .+......   +......+++++.+|+.|.+++.++++
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTL---VSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHT---SCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhc---cccccCCceEEEEccCCCHHHHHHHhc
Confidence            35689999999999999999999999999999999876322 22111100   000111567899999999999999999


Q ss_pred             CcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccc
Q 044905           81 NAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQ  152 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~  152 (427)
                      ++|+|||+++....     +  ....+|+.++.+++++|++.++++|||+||+++|+.....+. +..+....+.|+..+
T Consensus       100 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  179 (351)
T 3ruf_A          100 GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTK  179 (351)
T ss_dssp             TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH
T ss_pred             CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHH
Confidence            99999999997532     1  145788889999999999999999999999998765443222 222222234555554


Q ss_pred             cccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC------c----------cceEEecccccCCCCCcccHHHHHHHHH
Q 044905          153 PLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES------S----------YNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       153 ~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~------~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                       +..|.++..+. +.|++++++||+ +++......      .          ..+.+.+.+.  ...++||++|+|++++
T Consensus       180 -~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~--~~~~~i~v~Dva~a~~  256 (351)
T 3ruf_A          180 -YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGE--TSRDFCYIDNVIQMNI  256 (351)
T ss_dssp             -HHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSC--CEECCEEHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCC--eEEeeEEHHHHHHHHH
Confidence             56788777665 569999999997 333322110      0          0111212111  2236999999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      .++.+.+...+++||++++.   ..++.|++..+.+..+.
T Consensus       257 ~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          257 LSALAKDSAKDNIYNVAVGD---RTTLNELSGYIYDELNL  293 (351)
T ss_dssp             HHHTCCGGGCSEEEEESCSC---CEEHHHHHHHHHHHHHT
T ss_pred             HHHhhccccCCCEEEeCCCC---cccHHHHHHHHHHHhCc
Confidence            98876334578999999988   56677777777655443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.95  E-value=2e-26  Score=225.35  Aligned_cols=226  Identities=10%  Similarity=0.038  Sum_probs=167.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +|+|||||||||||++|++.|+++|++|++++|++.... +.               +++++.+|++ .+++.++++++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---------------~~~~~~~Dl~-~~~~~~~~~~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---------------DYEYRVSDYT-LEDLINQLNDVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------CCEEEECCCC-HHHHHHHTTTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---------------ceEEEEcccc-HHHHHHhhcCCC
Confidence            579999999999999999999999999999999954433 31               3458999999 999999999999


Q ss_pred             EEEEccCCCCCC---CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhhhccccccHHHH
Q 044905           84 KVVVTIGPTEDG---PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLFSRNQPLTVPEF  159 (427)
Q Consensus        84 ~Vi~~ag~~~~~---~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~~k~~~l~~E~~  159 (427)
                      +|||+++.....   ...++|+.++.+++++|++.++++|||+||+++|+.....+ .+..+....+.|+..+ +..|.+
T Consensus        65 ~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK-~~~E~~  143 (311)
T 3m2p_A           65 AVVHLAATRGSQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSK-LACEHI  143 (311)
T ss_dssp             EEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHH-HHHHHH
T ss_pred             EEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHH-HHHHHH
Confidence            999999976432   25678999999999999999999999999999876654222 2222222234565555 567888


Q ss_pred             HHHHh-cCCCeEEEEeCC-CCCCCCCC--Cc----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          160 LQKVI-ETDVSYTFIKTS-LTEDFSPE--SS----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       160 l~~l~-~~gl~~tilRPG-~~~~~~~~--~~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      +..+. +.|++++++||+ +++....+  ..          ..+.+.+.  .....+++|++|+|++++.++.++.  .+
T Consensus       144 ~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~v~v~Dva~a~~~~~~~~~--~~  219 (311)
T 3m2p_A          144 GNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHAN--SVAKREFLYAKDAAKSVIYALKQEK--VS  219 (311)
T ss_dssp             HHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSB--CCCCEEEEEHHHHHHHHHHHTTCTT--CC
T ss_pred             HHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecC--CCeEEceEEHHHHHHHHHHHHhcCC--CC
Confidence            87766 489999999997 44432221  00          11222121  1222369999999999999998653  68


Q ss_pred             cEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          226 KVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       226 ~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++||++++.   ..++.|++..+.+..+.
T Consensus       220 ~~~~i~~~~---~~s~~e~~~~i~~~~g~  245 (311)
T 3m2p_A          220 GTFNIGSGD---ALTNYEVANTINNAFGN  245 (311)
T ss_dssp             EEEEECCSC---EECHHHHHHHHHHHTTC
T ss_pred             CeEEeCCCC---cccHHHHHHHHHHHhCC
Confidence            999999988   67778888877765443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.94  E-value=3.1e-26  Score=226.86  Aligned_cols=226  Identities=14%  Similarity=0.113  Sum_probs=163.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..+|+|||||||||||++|++.|+++|++|++++|++..                   .++.++.+|++|.+++.+++++
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------~~~~~~~~Dl~d~~~~~~~~~~   77 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------TGGEEVVGSLEDGQALSDAIMG   77 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------SCCSEEESCTTCHHHHHHHHTT
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------CCccEEecCcCCHHHHHHHHhC
Confidence            356789999999999999999999999999999998754                   1335899999999999999999


Q ss_pred             cCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEecccccccc--cCCC-CCCCCccchhhhhcccc
Q 044905           82 AGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAAS--TYNV-LDGISSFFNNLFSRNQP  153 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~--~~~~-~~~~~~~~~~~~~k~~~  153 (427)
                      +|+|||+++......     .+++|+.++.+++++|.+.++++|||+||+++|+..  ...+ .+..+....+.|+.++ 
T Consensus        78 ~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK-  156 (347)
T 4id9_A           78 VSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTK-  156 (347)
T ss_dssp             CSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHH-
T ss_pred             CCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHH-
Confidence            999999999765432     456788899999999999999999999999988662  2111 1222222234555554 


Q ss_pred             ccHHHHHHHHh-cCCCeEEEEeCC-CC-------------CCCC-------------CC----------CccceEEeccc
Q 044905          154 LTVPEFLQKVI-ETDVSYTFIKTS-LT-------------EDFS-------------PE----------SSYNVVVSAEA  195 (427)
Q Consensus       154 l~~E~~l~~l~-~~gl~~tilRPG-~~-------------~~~~-------------~~----------~~~~i~~~~~~  195 (427)
                      +.+|.++..+. +.++++++|||+ ++             +...             ..          ....+...+.+
T Consensus       157 ~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  236 (347)
T 4id9_A          157 LLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARN  236 (347)
T ss_dssp             HHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEEC
T ss_pred             HHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCC
Confidence            56788877665 579999999997 33             1100             00          00011122211


Q ss_pred             ccCCCCCc----ccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          196 SVDANDYK----VAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       196 ~~~~~~~~----i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ..  ..++    +|++|+|++++.++.++. ..+++|||+++.   ..++.|++..+.+..+
T Consensus       237 ~~--~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  292 (347)
T 4id9_A          237 EN--GRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGADE---PADFAALLPKIAALTG  292 (347)
T ss_dssp             TT--CCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCSS---CEEHHHHHHHHHHHHC
T ss_pred             Cc--ccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCCC---cccHHHHHHHHHHHhC
Confidence            11  2256    999999999999998653 468999999987   5667777777765433

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.94  E-value=1.1e-26  Score=232.55  Aligned_cols=234  Identities=12%  Similarity=0.127  Sum_probs=168.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCC-CHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFD-SAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~-D~~sl~~al   79 (427)
                      |.||+|||||||||||++|++.|+++ ||+|++++|+.+....+..            ..+++++.+|++ |.+++.+++
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------------~~~v~~~~~Dl~~d~~~~~~~~   89 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------------HERMHFFEGDITINKEWVEYHV   89 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------------STTEEEEECCTTTCHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------------CCCeEEEeCccCCCHHHHHHHh
Confidence            66789999999999999999999998 9999999999865433311            246679999999 999999999


Q ss_pred             cCcCEEEEccCCCCCC-----C--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCc-------cc
Q 044905           80 GNAGKVVVTIGPTEDG-----P--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISS-------FF  144 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~-----~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~-------~~  144 (427)
                      +++|+|||+++.....     +  .+++|+.++.+++++|++.+ ++|||+||+++|+........+ ..+       ..
T Consensus        90 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p  168 (372)
T 3slg_A           90 KKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP  168 (372)
T ss_dssp             HHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCT
T ss_pred             ccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCC
Confidence            9999999999976421     1  34677789999999999999 9999999999876643322211 111       12


Q ss_pred             hhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCC----------C----------ccceEEecccccCCCCCc
Q 044905          145 NNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPE----------S----------SYNVVVSAEASVDANDYK  203 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~----------~----------~~~i~~~~~~~~~~~~~~  203 (427)
                      .+.|+.++ +..|.++..+...|++++++||+ +++....+          .          ...+.+.+.+  ....++
T Consensus       169 ~~~Y~~sK-~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~  245 (372)
T 3slg_A          169 RWIYACSK-QLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGG--SQKRAF  245 (372)
T ss_dssp             THHHHHHH-HHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGG--CCEEEC
T ss_pred             CCcHHHHH-HHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCC--ceEEEE
Confidence            23566555 66888887766449999999997 33332110          0          0012222211  122369


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecC-CCCChhhHHHHHHHHHhccch
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTD-PSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~-~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ||++|+|++++.++.++.. ..+++|||+++ .   ..++.|++..+.+..+.
T Consensus       246 i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~---~~s~~e~~~~i~~~~g~  295 (372)
T 3slg_A          246 TYVDDGISALMKIIENSNGVATGKIYNIGNPNN---NFSVRELANKMLELAAE  295 (372)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTC---EEEHHHHHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHhcccCcCCCceEEeCCCCC---CccHHHHHHHHHHHhCC
Confidence            9999999999999986532 46899999994 6   67778888877665443

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.94  E-value=3.7e-26  Score=212.47  Aligned_cols=209  Identities=17%  Similarity=0.238  Sum_probs=158.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~g~d   83 (427)
                      |+|+||||||+||++|++.|+++|++|++++|++++...+               .+++++.+|++| .+++.++++++|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------------~~~~~~~~D~~d~~~~~~~~~~~~d   65 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------------NNVKAVHFDVDWTPEEMAKQLHGMD   65 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------------TTEEEEECCTTSCHHHHHTTTTTCS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------------CCceEEEecccCCHHHHHHHHcCCC
Confidence            5899999999999999999999999999999998653322               345699999999 999999999999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV  163 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l  163 (427)
                      +|||++|..... .+++|+.++.+++++|++.++++||++||.+.+...  ++.+ .+......|+..+ ...|+++.  
T Consensus        66 ~vi~~ag~~~~~-~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~--~~~e-~~~~~~~~Y~~sK-~~~e~~~~--  138 (219)
T 3dqp_A           66 AIINVSGSGGKS-LLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE--KWIG-AGFDALKDYYIAK-HFADLYLT--  138 (219)
T ss_dssp             EEEECCCCTTSS-CCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG--GCCS-HHHHHTHHHHHHH-HHHHHHHH--
T ss_pred             EEEECCcCCCCC-cEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC--cccc-cccccccHHHHHH-HHHHHHHH--
Confidence            999999987643 578899999999999999999999999987754322  1111 1111224455444 44565553  


Q ss_pred             hcCCCeEEEEeCCC-CCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHH
Q 044905          164 IETDVSYTFIKTSL-TEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVD  242 (427)
Q Consensus       164 ~~~gl~~tilRPG~-~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~  242 (427)
                      ...+++|++||||. +++...   ..+.. +    .....+++++|+|++++.++.++ ...+++|+++++    ..++.
T Consensus       139 ~~~~i~~~ilrp~~v~g~~~~---~~~~~-~----~~~~~~i~~~Dva~~i~~~l~~~-~~~g~~~~i~~g----~~~~~  205 (219)
T 3dqp_A          139 KETNLDYTIIQPGALTEEEAT---GLIDI-N----DEVSASNTIGDVADTIKELVMTD-HSIGKVISMHNG----KTAIK  205 (219)
T ss_dssp             HSCCCEEEEEEECSEECSCCC---SEEEE-S----SSCCCCEEHHHHHHHHHHHHTCG-GGTTEEEEEEEC----SEEHH
T ss_pred             hccCCcEEEEeCceEecCCCC---Ccccc-C----CCcCCcccHHHHHHHHHHHHhCc-cccCcEEEeCCC----CccHH
Confidence            47899999999984 443221   22222 1    22336999999999999999875 456899999988    47777


Q ss_pred             HHHHHH
Q 044905          243 ELFSAI  248 (427)
Q Consensus       243 ell~~i  248 (427)
                      |++...
T Consensus       206 e~~~~~  211 (219)
T 3dqp_A          206 EALESL  211 (219)
T ss_dssp             HHHHTT
T ss_pred             HHHHHH
Confidence            777654

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.94  E-value=4.7e-26  Score=211.61  Aligned_cols=210  Identities=14%  Similarity=0.067  Sum_probs=149.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+||||||+||++|++.|+++|++|++++|++++...+..             .+++++.+|++|.++  .++.++|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-------------~~~~~~~~D~~d~~~--~~~~~~d~   65 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-------------ATVATLVKEPLVLTE--ADLDSVDA   65 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-------------TTSEEEECCGGGCCH--HHHTTCSE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-------------CCceEEecccccccH--hhcccCCE
Confidence            589999999999999999999999999999999876554422             345699999999887  88999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC----CCCCCCccchhhhhccccccHHHHH
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN----VLDGISSFFNNLFSRNQPLTVPEFL  160 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~----~~~~~~~~~~~~~~k~~~l~~E~~l  160 (427)
                      |||++|..........|+.++.+++++|++.| ++||++||++.+......    ..++..+.....|+..+ ...| .+
T Consensus        66 vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK-~~~e-~~  142 (224)
T 3h2s_A           66 VVDALSVPWGSGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGAL-YQYY-EY  142 (224)
T ss_dssp             EEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHH-HHHH-HH
T ss_pred             EEECCccCCCcchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHH-HHHH-HH
Confidence            99999986433356789999999999999999 999999987643322211    11111111134454443 3345 33


Q ss_pred             HHHh-cCCCeEEEEeCCC-CCCCCCCCccceEEeccc--ccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCC
Q 044905          161 QKVI-ETDVSYTFIKTSL-TEDFSPESSYNVVVSAEA--SVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       161 ~~l~-~~gl~~tilRPG~-~~~~~~~~~~~i~~~~~~--~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~  236 (427)
                      ..+. ..+++|++||||. +++..  .. ++......  ....+.++++++|+|++++.++.++ ...+++|++++.+..
T Consensus       143 ~~~~~~~~i~~~ivrp~~v~g~~~--~~-~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~-~~~g~~~~~~~~~~~  218 (224)
T 3h2s_A          143 QFLQMNANVNWIGISPSEAFPSGP--AT-SYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHP-TAIRDRIVVRDADLE  218 (224)
T ss_dssp             HHHTTCTTSCEEEEEECSBCCCCC--CC-CEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC-CCTTSEEEEEECC--
T ss_pred             HHHHhcCCCcEEEEcCccccCCCc--cc-CceecccccccCCCCCceEeHHHHHHHHHHHhcCc-cccCCEEEEecCcch
Confidence            4444 7899999999984 43311  11 12221111  1122346899999999999999875 467999999997633

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.94  E-value=4.7e-26  Score=210.72  Aligned_cols=210  Identities=15%  Similarity=0.147  Sum_probs=138.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|+||||||+||++|++.|+++|++|++++|++++...+.              .+++++.+|++|.++  +++.++|+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------------~~~~~~~~D~~d~~~--~~~~~~d~   64 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------------KDINILQKDIFDLTL--SDLSDQNV   64 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------------SSSEEEECCGGGCCH--HHHTTCSE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------------CCCeEEeccccChhh--hhhcCCCE
Confidence            58999999999999999999999999999999987655442              345699999999887  88999999


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC--CCCCCCccchhhhhccccccHHHHHHH
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN--VLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~--~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      |||++|....  ....++.++.+++++|++.|++++|++||++.+.+....  .....+......|...+ ...|.+ ..
T Consensus        65 vi~~ag~~~~--~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k-~~~e~~-~~  140 (221)
T 3ew7_A           65 VVDAYGISPD--EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTAR-AQAKQL-EH  140 (221)
T ss_dssp             EEECCCSSTT--TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHH-HHHHHH-HH
T ss_pred             EEECCcCCcc--ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHH-HHHHHH-HH
Confidence            9999998532  356788899999999999999999999998754332211  11111111222333332 224443 34


Q ss_pred             Hh--cCCCeEEEEeCCC-CCCCCCCCccceEEeccc--ccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCC
Q 044905          163 VI--ETDVSYTFIKTSL-TEDFSPESSYNVVVSAEA--SVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAP  237 (427)
Q Consensus       163 l~--~~gl~~tilRPG~-~~~~~~~~~~~i~~~~~~--~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~  237 (427)
                      +.  ..|++|+++|||. +++. . ....+......  ....+.++++++|+|++++.++.++ ...|+.|+++++...+
T Consensus       141 ~~~~~~gi~~~ivrp~~v~g~~-~-~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~-~~~g~~~~~~~~~~~~  217 (221)
T 3ew7_A          141 LKSHQAEFSWTYISPSAMFEPG-E-RTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERP-NHLNEHFTVAGKLEHH  217 (221)
T ss_dssp             HHTTTTTSCEEEEECSSCCCCC-----------------------CCCHHHHHHHHHHHHHSC-SCTTSEEECCC-----
T ss_pred             HHhhccCccEEEEeCcceecCC-C-ccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCc-cccCCEEEECCCCccc
Confidence            45  6899999999984 4331 1 11111111110  1112236899999999999999876 4689999999986443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=1e-25  Score=211.90  Aligned_cols=211  Identities=18%  Similarity=0.219  Sum_probs=156.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccc-eEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRL-NAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl-~vv~gDl~D~~sl~~al~   80 (427)
                      +..|+|+||||||+||++|++.|+++|++|++++|++++...+...             ++ .++.+|++  +.+.+++.
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~-------------~~~~~~~~Dl~--~~~~~~~~   83 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER-------------GASDIVVANLE--EDFSHAFA   83 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT-------------TCSEEEECCTT--SCCGGGGT
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC-------------CCceEEEcccH--HHHHHHHc
Confidence            4578999999999999999999999999999999999877666443             34 48999998  77888999


Q ss_pred             CcCEEEEccCCCCCCC---CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHH
Q 044905           81 NAGKVVVTIGPTEDGP---TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVP  157 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~---~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E  157 (427)
                      ++|+|||++|......   .+++|+.++.+++++|++.++++||++||.+.....    ..+   .....|+..+ ...|
T Consensus        84 ~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~----~~~---~~~~~Y~~sK-~~~e  155 (236)
T 3e8x_A           84 SIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPD----QGP---MNMRHYLVAK-RLAD  155 (236)
T ss_dssp             TCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGG----GSC---GGGHHHHHHH-HHHH
T ss_pred             CCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCC----CCh---hhhhhHHHHH-HHHH
Confidence            9999999999765332   567789999999999999999999999986532211    011   1223444443 3455


Q ss_pred             HHHHHHhcCCCeEEEEeCCCC-CCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCC
Q 044905          158 EFLQKVIETDVSYTFIKTSLT-EDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       158 ~~l~~l~~~gl~~tilRPG~~-~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~  236 (427)
                      .+++   ..|+++++||||.+ ++...   ..+........  ...+++++|+|++++.++.++ ...+++|++.+++  
T Consensus       156 ~~~~---~~gi~~~~lrpg~v~~~~~~---~~~~~~~~~~~--~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~v~~~~--  224 (236)
T 3e8x_A          156 DELK---RSSLDYTIVRPGPLSNEEST---GKVTVSPHFSE--ITRSITRHDVAKVIAELVDQQ-HTIGKTFEVLNGD--  224 (236)
T ss_dssp             HHHH---HSSSEEEEEEECSEECSCCC---SEEEEESSCSC--CCCCEEHHHHHHHHHHHTTCG-GGTTEEEEEEECS--
T ss_pred             HHHH---HCCCCEEEEeCCcccCCCCC---CeEEeccCCCc--ccCcEeHHHHHHHHHHHhcCc-cccCCeEEEeCCC--
Confidence            5543   68999999999844 33221   22222222211  246999999999999999865 3679999999883  


Q ss_pred             ChhhHHHHHHHH
Q 044905          237 PARRVDELFSAI  248 (427)
Q Consensus       237 ~~~s~~ell~~i  248 (427)
                        .++.|++..+
T Consensus       225 --~~~~e~~~~i  234 (236)
T 3e8x_A          225 --TPIAKVVEQL  234 (236)
T ss_dssp             --EEHHHHHHTC
T ss_pred             --cCHHHHHHHh
Confidence              6788887765

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.94  E-value=4.3e-26  Score=225.78  Aligned_cols=235  Identities=8%  Similarity=0.041  Sum_probs=165.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +.+|+|||||||||||++|++.|+++|  ++|++++|....  ...+...         ....+++++.+|++|.+++.+
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~---------~~~~~~~~~~~Dl~d~~~~~~   92 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI---------QDHPNYYFVKGEIQNGELLEH   92 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT---------TTCTTEEEEECCTTCHHHHHH
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh---------ccCCCeEEEEcCCCCHHHHHH
Confidence            456789999999999999999999999  788888876521  1111110         112467899999999999999


Q ss_pred             HhcC--cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC--CCCCCCCccchh
Q 044905           78 AIGN--AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY--NVLDGISSFFNN  146 (427)
Q Consensus        78 al~g--~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~--~~~~~~~~~~~~  146 (427)
                      ++++  +|+|||+++.....       ..+++|+.++.+++++|++.|+++|||+||.++|+....  ...+..+....+
T Consensus        93 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~  172 (346)
T 4egb_A           93 VIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNS  172 (346)
T ss_dssp             HHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCS
T ss_pred             HHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCC
Confidence            9987  99999999975432       145788899999999999999999999999998766421  112222222234


Q ss_pred             hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC--c----------cceEEecccccCCCCCcccHHHHHHH
Q 044905          147 LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES--S----------YNVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~--~----------~~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      .|+..+ +.+|.++..+. +.|++++++||+ +++......  .          ..+.+.+.+.  ...++||++|+|++
T Consensus       173 ~Y~~sK-~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~a  249 (346)
T 4egb_A          173 PYSSSK-ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGL--NVRDWLHVTDHCSA  249 (346)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSC--CEECEEEHHHHHHH
T ss_pred             hhHHHH-HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCC--eEEeeEEHHHHHHH
Confidence            565554 56788777765 469999999997 443322110  0          0122222221  22368999999999


Q ss_pred             HHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          213 VADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++.++.++.  .+++||++++.   ..++.|++..+.+..+
T Consensus       250 ~~~~~~~~~--~g~~~~i~~~~---~~s~~e~~~~i~~~~g  285 (346)
T 4egb_A          250 IDVVLHKGR--VGEVYNIGGNN---EKTNVEVVEQIITLLG  285 (346)
T ss_dssp             HHHHHHHCC--TTCEEEECCSC---CEEHHHHHHHHHHHHT
T ss_pred             HHHHHhcCC--CCCEEEECCCC---ceeHHHHHHHHHHHhC
Confidence            999997542  68999999997   5667777777766544

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.94  E-value=2.1e-26  Score=227.30  Aligned_cols=231  Identities=11%  Similarity=0.044  Sum_probs=159.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ++|+|||||||||||++|++.|+++|++|++++|++.....+.             ..+++++.+|++|.+++.++++++
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------------~~~~~~~~~Dl~d~~~~~~~~~~~   78 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-------------YLEPECRVAEMLDHAGLERALRGL   78 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-------------GGCCEEEECCTTCHHHHHHHTTTC
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-------------cCCeEEEEecCCCHHHHHHHHcCC
Confidence            4569999999999999999999999999999999876543321             125568999999999999999999


Q ss_pred             CEEEEccCCCCC-----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC--CCCCCCCccc----hhhhhcc
Q 044905           83 GKVVVTIGPTED-----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY--NVLDGISSFF----NNLFSRN  151 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~--~~~~~~~~~~----~~~~~k~  151 (427)
                      |+|||+++....     ...+++|+.++.+++++|..+|+++|||+||.++|+....  ...+..+...    .+.|+..
T Consensus        79 d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~s  158 (342)
T 2x4g_A           79 DGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLC  158 (342)
T ss_dssp             SEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHH
T ss_pred             CEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHH
Confidence            999999986432     2256789999999999999999999999999988755332  1111111111    3345554


Q ss_pred             ccccHHHHHHHHhcCCCeEEEEeCC-CCCCCC-CCCccceE---Eecccc--cCCCCCcccHHHHHHHHHHHhcCccccc
Q 044905          152 QPLTVPEFLQKVIETDVSYTFIKTS-LTEDFS-PESSYNVV---VSAEAS--VDANDYKVAKSQIASLVADVFSNTAVAE  224 (427)
Q Consensus       152 ~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~-~~~~~~i~---~~~~~~--~~~~~~~i~v~DVA~~v~~al~~~~~~~  224 (427)
                      + ...|.++..+...|+++++|||| +++... ......+.   ..+...  .....+++|++|+|++++.++.++.  .
T Consensus       159 K-~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~  235 (342)
T 2x4g_A          159 K-WALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR--I  235 (342)
T ss_dssp             H-HHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC--T
T ss_pred             H-HHHHHHHHHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC--C
Confidence            4 56788777765349999999998 343322 10001000   001000  1122358999999999999987543  3


Q ss_pred             CcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          225 NKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       225 g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +++||++++.    .++.|++..+.+..+
T Consensus       236 g~~~~v~~~~----~s~~e~~~~i~~~~g  260 (342)
T 2x4g_A          236 GERYLLTGHN----LEMADLTRRIAELLG  260 (342)
T ss_dssp             TCEEEECCEE----EEHHHHHHHHHHHHT
T ss_pred             CceEEEcCCc----ccHHHHHHHHHHHhC
Confidence            8899999985    556666666655433

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.93  E-value=5.5e-27  Score=226.70  Aligned_cols=273  Identities=14%  Similarity=0.144  Sum_probs=177.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |+|+||||||+||++|++.|+++ |++|++++|++++...+.             ..+++++.+|++|++++.++++++|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-------------~~~v~~~~~D~~d~~~l~~~~~~~d   67 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-------------RGKVSVRQLDYFNQESMVEAFKGMD   67 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-------------BTTBEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-------------hCCCEEEEcCCCCHHHHHHHHhCCC
Confidence            57999999999999999999998 999999999987644332             2355699999999999999999999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV  163 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l  163 (427)
                      +|||+++...   ....++.++.+++++|+++|+++|||+||.+..  ..    .+   +....+..    ..|   ..+
T Consensus        68 ~vi~~a~~~~---~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~--~~----~~---~~~~~~~~----~~e---~~~  128 (289)
T 3e48_A           68 TVVFIPSIIH---PSFKRIPEVENLVYAAKQSGVAHIIFIGYYADQ--HN----NP---FHMSPYFG----YAS---RLL  128 (289)
T ss_dssp             EEEECCCCCC---SHHHHHHHHHHHHHHHHHTTCCEEEEEEESCCS--TT----CC---STTHHHHH----HHH---HHH
T ss_pred             EEEEeCCCCc---cchhhHHHHHHHHHHHHHcCCCEEEEEcccCCC--CC----CC---CccchhHH----HHH---HHH
Confidence            9999998754   234567799999999999999999999986521  10    11   11111111    123   334


Q ss_pred             hcCCCeEEEEeCC-CCCCCCCCCcc-----ceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCC
Q 044905          164 IETDVSYTFIKTS-LTEDFSPESSY-----NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAP  237 (427)
Q Consensus       164 ~~~gl~~tilRPG-~~~~~~~~~~~-----~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~  237 (427)
                      .+.|++|++|||| +++++.. +..     .....+.  .....++++++|+|++++.++.++. ..+++|+++ +.   
T Consensus       129 ~~~g~~~~ilrp~~~~~~~~~-~~~~~~~~~~~~~~~--g~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~-~~---  200 (289)
T 3e48_A          129 STSGIDYTYVRMAMYMDPLKP-YLPELMNMHKLIYPA--GDGRINYITRNDIARGVIAIIKNPD-TWGKRYLLS-GY---  200 (289)
T ss_dssp             HHHCCEEEEEEECEESTTHHH-HHHHHHHHTEECCCC--TTCEEEEECHHHHHHHHHHHHHCGG-GTTCEEEEC-CE---
T ss_pred             HHcCCCEEEEeccccccccHH-HHHHHHHCCCEecCC--CCceeeeEEHHHHHHHHHHHHcCCC-cCCceEEeC-CC---
Confidence            4689999999998 5554321 111     1111111  1222368999999999999998753 348999999 76   


Q ss_pred             hhhHHHHHHHHHhccchh-hhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHhhhcHHHHHHHhhHHHHHHhhhhc
Q 044905          238 ARRVDELFSAIAEDGRRA-AYAEALAKEKAEKEARIAAEK-AREAAEAATKLEEEVKKLSEQEAKAASLAEEAQEKADVA  315 (427)
Q Consensus       238 ~~s~~ell~~i~~~~~~~-~~~~~~~~~~~~eea~~~~~~-a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (427)
                      ..++.|++..+.+..++. .|.....     ++.+..... .+.+...+.....    +  ...........++.-.|.+
T Consensus       201 ~~s~~e~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~~p~~~~~~~~~~~~~----~--~~g~~~~~~~~~~~~~G~~  269 (289)
T 3e48_A          201 SYDMKELAAILSEASGTEIKYEPVSL-----ETFAEMYDEPKGFGALLASMYHA----G--ARGLLDQESNDFKQLVNDQ  269 (289)
T ss_dssp             EEEHHHHHHHHHHHHTSCCEECCCCH-----HHHHHHTCCSTTHHHHHHHHHHH----H--HTTTTCCCCSHHHHHHSSC
T ss_pred             cCCHHHHHHHHHHHHCCceeEEeCCH-----HHHHHHhcCCccHHHHHHHHHHH----H--HCCCccccCchHHHHhCCC
Confidence            678888888888765543 3332222     121111111 1122221111111    0  1111112234567788999


Q ss_pred             CCCHHHHHHhhcc
Q 044905          316 GAPMDTLLSKAKG  328 (427)
Q Consensus       316 ~~~~~~~~~~~~~  328 (427)
                      .+||++++..-|.
T Consensus       270 p~~~~~~~~~~~~  282 (289)
T 3e48_A          270 PQTLQSFLQENIL  282 (289)
T ss_dssp             CCCHHHHHHC---
T ss_pred             CCCHHHHHHHHHH
Confidence            9999999987664

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.93  E-value=6.4e-26  Score=218.56  Aligned_cols=210  Identities=24%  Similarity=0.308  Sum_probs=154.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|+|||||||+|++|++.|+++  |++|++++|++.+...+...             +++++.+|++|.+++.++++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~-------------~~~~~~~D~~d~~~l~~~~~~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQ-------------GVEVRHGDYNQPESLQKAFAGV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHT-------------TCEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhc-------------CCeEEEeccCCHHHHHHHHhcC
Confidence            57999999999999999999999  99999999998765554332             3458999999999999999999


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      |+|||+++...   ...+|+.++.+++++|+++|+++|||+||.+++..       + .     .|+..+ ...|.+++ 
T Consensus        68 d~vi~~a~~~~---~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-------~-~-----~y~~~K-~~~E~~~~-  129 (287)
T 2jl1_A           68 SKLLFISGPHY---DNTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-------I-I-----PLAHVH-LATEYAIR-  129 (287)
T ss_dssp             SEEEECCCCCS---CHHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-------C-S-----THHHHH-HHHHHHHH-
T ss_pred             CEEEEcCCCCc---CchHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-------C-C-----chHHHH-HHHHHHHH-
Confidence            99999998632   12458889999999999999999999998875310       1 1     233332 34565553 


Q ss_pred             HhcCCCeEEEEeCCCC-CCCCCCCcc-----ceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCC
Q 044905          163 VIETDVSYTFIKTSLT-EDFSPESSY-----NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       163 l~~~gl~~tilRPG~~-~~~~~~~~~-----~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~  236 (427)
                        +.|++++++|||.+ +++......     +....+.+  ....++++++|+|++++.++.++ ...+++||++++.  
T Consensus       130 --~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~~~--  202 (287)
T 2jl1_A          130 --TTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTNAG--SGIVNSVTRNELALAAATVLTEE-GHENKTYNLVSNQ--  202 (287)
T ss_dssp             --HTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEESCT--TCCBCCBCHHHHHHHHHHHHTSS-SCTTEEEEECCSS--
T ss_pred             --HcCCCeEEEECCEeccccchhhHHHHhhCCceeccCC--CCccCccCHHHHHHHHHHHhcCC-CCCCcEEEecCCC--
Confidence              48999999999843 222111111     11111111  12346999999999999999764 3468899999987  


Q ss_pred             ChhhHHHHHHHHHhccc
Q 044905          237 PARRVDELFSAIAEDGR  253 (427)
Q Consensus       237 ~~~s~~ell~~i~~~~~  253 (427)
                       ..++.|++..+.+..+
T Consensus       203 -~~s~~e~~~~i~~~~g  218 (287)
T 2jl1_A          203 -PWTFDELAQILSEVSG  218 (287)
T ss_dssp             -CBCHHHHHHHHHHHHS
T ss_pred             -cCCHHHHHHHHHHHHC
Confidence             5667777777766544

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=4.4e-25  Score=219.46  Aligned_cols=242  Identities=10%  Similarity=0.048  Sum_probs=165.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+|+|||||||||||++|++.|+++|++|++++|+... ...+......   +......++.++.+|++|.+++.++++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSL---VSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH---SCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhh---cccccCCceEEEECCCCCHHHHHHHhc
Confidence            457899999999999999999999999999999997642 1122111000   000012456789999999999999999


Q ss_pred             CcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccc
Q 044905           81 NAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQ  152 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~  152 (427)
                      ++|+|||+++....     +  ..+++|+.++.+++++|...++++|||+||.++|+.....+. +..+....+.|+..+
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK  181 (352)
T 1sb8_A          102 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK  181 (352)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH
T ss_pred             CCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHH
Confidence            99999999997542     1  145688889999999999999999999999998765432221 211212234555544


Q ss_pred             cccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC------c----c------ceEEecccccCCCCCcccHHHHHHHHH
Q 044905          153 PLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES------S----Y------NVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       153 ~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~------~----~------~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                       ...|.++..+. +.|++++++||| +++......      .    .      .+.+.+.+  ....++++++|+|++++
T Consensus       182 -~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g--~~~~~~i~v~Dva~a~~  258 (352)
T 1sb8_A          182 -YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDG--ETSRDFCYIENTVQANL  258 (352)
T ss_dssp             -HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS--CCEECCEEHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCC--CceEeeEEHHHHHHHHH
Confidence             55787776655 468999999997 333322110      0    0      01111111  11236999999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      .++...+...+++||++++.   ..++.|++..+.+..
T Consensus       259 ~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          259 LAATAGLDARNQVYNIAVGG---RTSLNQLFFALRDGL  293 (352)
T ss_dssp             HHHTCCGGGCSEEEEESCSC---CEEHHHHHHHHHHHH
T ss_pred             HHHhccccCCCceEEeCCCC---CccHHHHHHHHHHHH
Confidence            88875334468999999987   566666666665443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.93  E-value=6.4e-25  Score=206.72  Aligned_cols=227  Identities=17%  Similarity=0.248  Sum_probs=158.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +.+++|+||||||+||++|++.|+++  |++|++++|++.+...+              ..++.++.+|++|.+++.+++
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------------~~~~~~~~~D~~d~~~~~~~~   67 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------GGEADVFIGDITDADSINPAF   67 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------TCCTTEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------------CCCeeEEEecCCCHHHHHHHH
Confidence            56789999999999999999999999  89999999987654332              124458999999999999999


Q ss_pred             cCcCEEEEccCCCCCC-----------C---------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           80 GNAGKVVVTIGPTEDG-----------P---------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~-----------~---------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                      +++|+|||++|.....           +         ..++|+.++.+++++|++.++++||++||.+++..     ..+
T Consensus        68 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~-----~~~  142 (253)
T 1xq6_A           68 QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP-----DHP  142 (253)
T ss_dssp             TTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT-----TCG
T ss_pred             cCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC-----CCc
Confidence            9999999999865310           1         13688889999999999999999999998874311     111


Q ss_pred             CCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCccceEEecccc-cCCCCCcccHHHHHHHHHHHh
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPESSYNVVVSAEAS-VDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~-~~~~~~~i~v~DVA~~v~~al  217 (427)
                      ...+....|...+ ...|.++   ...|++++++||| ++++...  ...+....... ......+++++|+|++++.++
T Consensus       143 ~~~~~~~~y~~sK-~~~e~~~---~~~~i~~~~vrpg~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~  216 (253)
T 1xq6_A          143 LNKLGNGNILVWK-RKAEQYL---ADSGTPYTIIRAGGLLDKEGG--VRELLVGKDDELLQTDTKTVPRADVAEVCIQAL  216 (253)
T ss_dssp             GGGGGGCCHHHHH-HHHHHHH---HTSSSCEEEEEECEEECSCSS--SSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHT
T ss_pred             cccccchhHHHHH-HHHHHHH---HhCCCceEEEecceeecCCcc--hhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHH
Confidence            2222222233222 3345443   4589999999998 3333211  11222211111 111235899999999999999


Q ss_pred             cCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          218 SNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       218 ~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      .++ ...+++|++++++.....++.|++..+.+..++
T Consensus       217 ~~~-~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          217 LFE-EAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             TCG-GGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             cCc-cccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            865 346889999997521124566666666655443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=6.4e-25  Score=216.73  Aligned_cols=240  Identities=12%  Similarity=0.094  Sum_probs=166.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      +|+|||||||||||++|++.|+++|++|++++|+.............      ....++.++.+|++|.+++.++++  +
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEK------ITGKTPAFHETDVSDERALARIFDAHP   78 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHH------HHSCCCEEECCCTTCHHHHHHHHHHSC
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHh------hcCCCceEEEeecCCHHHHHHHHhccC
Confidence            46899999999999999999999999999999987653322211100      012356789999999999999998  8


Q ss_pred             cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhcccc
Q 044905           82 AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQP  153 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~  153 (427)
                      +|+|||++|....+       ..++.|+.++.+++++|++.++++||++||+++|+.....+. +..+....+.|+.++ 
T Consensus        79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK-  157 (341)
T 3enk_A           79 ITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTK-  157 (341)
T ss_dssp             CCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHH-
T ss_pred             CcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHH-
Confidence            99999999976421       145678999999999999999999999999998755433222 222222234565554 


Q ss_pred             ccHHHHHHHHh-cC-CCeEEEEeCC-CCCCCCC-----------CC------------ccceEEeccc----ccCCCCCc
Q 044905          154 LTVPEFLQKVI-ET-DVSYTFIKTS-LTEDFSP-----------ES------------SYNVVVSAEA----SVDANDYK  203 (427)
Q Consensus       154 l~~E~~l~~l~-~~-gl~~tilRPG-~~~~~~~-----------~~------------~~~i~~~~~~----~~~~~~~~  203 (427)
                      ...|.++..+. +. +++++++||+ .++....           ..            ...+...+..    ......++
T Consensus       158 ~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  237 (341)
T 3enk_A          158 LMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDY  237 (341)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECE
T ss_pred             HHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEee
Confidence            56788877665 44 5999999986 3322110           00            0111221210    11112369


Q ss_pred             ccHHHHHHHHHHHhcCc-ccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          204 VAKSQIASLVADVFSNT-AVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~-~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ||++|+|++++.++.++ +...+++||++++.   ..++.|++..+.+..+
T Consensus       238 i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  285 (341)
T 3enk_A          238 IHVVDLARGHIAALDALERRDASLTVNLGTGR---GYSVLEVVRAFEKASG  285 (341)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHTSCEEEEESCSC---CEEHHHHHHHHHHHHC
T ss_pred             EEHHHHHHHHHHHHHhhhcCCcceEEEeCCCC---ceeHHHHHHHHHHHhC
Confidence            99999999999988753 13468999999987   5677777777766533

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.93  E-value=5.8e-25  Score=221.37  Aligned_cols=229  Identities=12%  Similarity=0.047  Sum_probs=164.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .||+|||||||||||++|++.|+++|++|++++|+......+.             ..+++++.+|++|.+++.++++++
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~~~v~~~~~Dl~d~~~~~~~~~~~   94 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-------------MFCDEFHLVDLRVMENCLKVTEGV   94 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-------------GTCSEEEECCTTSHHHHHHHHTTC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-------------cCCceEEECCCCCHHHHHHHhCCC
Confidence            4679999999999999999999999999999999876422110             235568999999999999999999


Q ss_pred             CEEEEccCCCCC-----C-C--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-----C-CCC--Cccchh
Q 044905           83 GKVVVTIGPTED-----G-P--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-----L-DGI--SSFFNN  146 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~-~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-----~-~~~--~~~~~~  146 (427)
                      |+|||+++....     . +  .+++|+.++.+++++|++.++++|||+||.++|+......     . +..  +....+
T Consensus        95 d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~  174 (379)
T 2c5a_A           95 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD  174 (379)
T ss_dssp             SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred             CEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCC
Confidence            999999997542     1 1  4568899999999999999999999999998876432110     0 000  111223


Q ss_pred             hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC------c----------cc-eEEecccccCCCCCcccHH
Q 044905          147 LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES------S----------YN-VVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~------~----------~~-i~~~~~~~~~~~~~~i~v~  207 (427)
                      .|+..+ +..|.++..+. +.|+++++|||| +++......      .          .. +...+.+.  ...+++|++
T Consensus       175 ~Y~~sK-~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~--~~~~~i~v~  251 (379)
T 2c5a_A          175 AFGLEK-LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL--QTRSFTFID  251 (379)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC--CEECCEEHH
T ss_pred             hhHHHH-HHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCC--eeEEEEEHH
Confidence            455444 55777776654 568999999997 333321110      0          00 22222211  123699999


Q ss_pred             HHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          208 QIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       208 DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      |+|++++.++.++   .+++||++++.   ..++.|++..+.+..+
T Consensus       252 Dva~ai~~~l~~~---~~~~~ni~~~~---~~s~~e~~~~i~~~~g  291 (379)
T 2c5a_A          252 ECVEGVLRLTKSD---FREPVNIGSDE---MVSMNEMAEMVLSFEE  291 (379)
T ss_dssp             HHHHHHHHHHHSS---CCSCEEECCCC---CEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhhcc---CCCeEEeCCCC---ccCHHHHHHHHHHHhC
Confidence            9999999999754   47899999987   6677888888876544

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.93  E-value=8e-26  Score=220.46  Aligned_cols=227  Identities=11%  Similarity=0.028  Sum_probs=162.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|||||||||||++|++.|+++|++|++++|+........             ..+++++.+|+.|.+ +.+++++ |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~~Dl~d~~-~~~~~~~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------------NPSAELHVRDLKDYS-WGAGIKG-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------------CTTSEEECCCTTSTT-TTTTCCC-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------------CCCceEEECccccHH-HHhhcCC-CE
Confidence            68999999999999999999999999999999876432221             234568999999998 8888888 99


Q ss_pred             EEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC-CCCccchhhhhccccccH
Q 044905           85 VVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD-GISSFFNNLFSRNQPLTV  156 (427)
Q Consensus        85 Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~-~~~~~~~~~~~k~~~l~~  156 (427)
                      |||+++......       .+++|+.++.+++++|++.++++|||+||+++|+.....+.. ..+....+.|+.++ ...
T Consensus        66 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK-~~~  144 (312)
T 3ko8_A           66 VFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAK-AAG  144 (312)
T ss_dssp             EEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHH-HHH
T ss_pred             EEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHH-HHH
Confidence            999999643211       456889999999999999999999999999988765432222 22222234565555 567


Q ss_pred             HHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc------------cceEEecccccCCCCCcccHHHHHHHHHHHhcCc--
Q 044905          157 PEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS------------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNT--  220 (427)
Q Consensus       157 E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~------------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~--  220 (427)
                      |.++..+. +.|++++++||+ +++.......            ..+...+.+.  ...+++|++|+|++++.++.++  
T Consensus       145 e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~i~v~Dva~a~~~~~~~~~~  222 (312)
T 3ko8_A          145 EVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGT--QRKSYLYVRDAVEATLAAWKKFEE  222 (312)
T ss_dssp             HHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC------CEECEEEHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCC--eEEeeEEHHHHHHHHHHHHHhccc
Confidence            88777765 469999999997 4443222110            0111212111  1236999999999999998751  


Q ss_pred             ccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          221 AVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       221 ~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      ....+++||++++.   ..++.|++..+.+..
T Consensus       223 ~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~  251 (312)
T 3ko8_A          223 MDAPFLALNVGNVD---AVRVLDIAQIVAEVL  251 (312)
T ss_dssp             SCCSEEEEEESCSS---CEEHHHHHHHHHHHH
T ss_pred             cCCCCcEEEEcCCC---ceeHHHHHHHHHHHh
Confidence            12467899999987   566777777766543

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.93  E-value=1.1e-24  Score=199.11  Aligned_cols=204  Identities=14%  Similarity=0.172  Sum_probs=149.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |..|+|+||||||++|++|++.|+++|++|++++|++++...+.             ..++.++.+|++|.+++.+++++
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~~~~   67 (206)
T 1hdo_A            1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-------------PRPAHVVVGDVLQAADVDKTVAG   67 (206)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-------------CCCSEEEESCTTSHHHHHHHHTT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-------------CCceEEEEecCCCHHHHHHHHcC
Confidence            44579999999999999999999999999999999976532110             23567899999999999999999


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHH
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQ  161 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~  161 (427)
                      +|+|||++|........++|+.++.+++++|++.++++||++||.+++.....     .+. ....|...+ ...|.++ 
T Consensus        68 ~d~vi~~a~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~-----~~~-~~~~y~~~K-~~~e~~~-  139 (206)
T 1hdo_A           68 QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK-----VPP-RLQAVTDDH-IRMHKVL-  139 (206)
T ss_dssp             CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC-----SCG-GGHHHHHHH-HHHHHHH-
T ss_pred             CCEEEECccCCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCccc-----ccc-cchhHHHHH-HHHHHHH-
Confidence            99999999976542335688889999999999999999999999886543221     111 223344333 2345444 


Q ss_pred             HHhcCCCeEEEEeCCCC-CCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          162 KVIETDVSYTFIKTSLT-EDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       162 ~l~~~gl~~tilRPG~~-~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                        ...+++|+++|||.+ .+...   ..+...-...+.  ..+++++|+|++++.++.++ ...|++|++.++.
T Consensus       140 --~~~~i~~~~lrp~~~~~~~~~---~~~~~~~~~~~~--~~~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~g~  205 (206)
T 1hdo_A          140 --RESGLKYVAVMPPHIGDQPLT---GAYTVTLDGRGP--SRVISKHDLGHFMLRCLTTD-EYDGHSTYPSHQY  205 (206)
T ss_dssp             --HHTCSEEEEECCSEEECCCCC---SCCEEESSSCSS--CSEEEHHHHHHHHHHTTSCS-TTTTCEEEEECCC
T ss_pred             --HhCCCCEEEEeCCcccCCCCC---cceEecccCCCC--CCccCHHHHHHHHHHHhcCc-cccccceeeeccc
Confidence              458999999999854 22211   111111111111  26999999999999999875 4678999999874

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.92  E-value=4.7e-25  Score=215.51  Aligned_cols=226  Identities=10%  Similarity=0.108  Sum_probs=159.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ||+|||||||||||++|++.|+++|+ ++++++ +......+              ..++.++.+|++| +++.++++++
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~-~~~~~~~~~~   64 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFV--------------NEAARLVKADLAA-DDIKDYLKGA   64 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGS--------------CTTEEEECCCTTT-SCCHHHHTTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhc--------------CCCcEEEECcCCh-HHHHHHhcCC
Confidence            57999999999999999999999994 555554 43322111              2345689999999 9999999999


Q ss_pred             CEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC-CCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD-GISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~-~~~~~~~~~~~k~~~l  154 (427)
                      |+|||+++.....       ..+++|+.++.+++++|++.++++|||+||+++|+.....+.. ..+....+.|+.++ .
T Consensus        65 d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK-~  143 (313)
T 3ehe_A           65 EEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASK-L  143 (313)
T ss_dssp             SEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHH-H
T ss_pred             CEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHH-H
Confidence            9999999864321       1567899999999999999999999999999987654432222 12222234565554 5


Q ss_pred             cHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc------------cceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          155 TVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS------------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       155 ~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~------------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      ..|.++..+. +.|++++++||+ +++.......            ..+...+.+.  ...+++|++|+|++++.++.. 
T Consensus       144 ~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~i~v~Dva~a~~~~~~~-  220 (313)
T 3ehe_A          144 ACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGE--QNKSYIYISDCVDAMLFGLRG-  220 (313)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSC--CEECCEEHHHHHHHHHHHTTC-
T ss_pred             HHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCC--eEEeEEEHHHHHHHHHHHhcc-
Confidence            6788887765 579999999997 4433222100            1111222211  223699999999999999973 


Q ss_pred             ccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          221 AVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       221 ~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                       ...+++||++++.   ..++.|++..+.+..+
T Consensus       221 -~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  249 (313)
T 3ehe_A          221 -DERVNIFNIGSED---QIKVKRIAEIVCEELG  249 (313)
T ss_dssp             -CSSEEEEECCCSC---CEEHHHHHHHHHHHTT
T ss_pred             -CCCCceEEECCCC---CeeHHHHHHHHHHHhC
Confidence             3467999999988   5677777777776544

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.92  E-value=4.9e-25  Score=216.55  Aligned_cols=233  Identities=10%  Similarity=0.110  Sum_probs=162.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      ||+|||||||||||++|++.|+++|++|++++|+.......         +    ..+++++.+|++|.+++.++++  +
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~----~~~~~~~~~D~~~~~~~~~~~~~~~   67 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDA---------I----TEGAKFYNGDLRDKAFLRDVFTQEN   67 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---------S----CTTSEEEECCTTCHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhh---------c----CCCcEEEECCCCCHHHHHHHHhhcC
Confidence            57999999999999999999999999999999976532100         0    1245689999999999999998  9


Q ss_pred             cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhcccc
Q 044905           82 AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQP  153 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~  153 (427)
                      +|+|||+++.....       ..+++|+.++.+++++|++.++++|||+||.++|+.....+. +..+....+.|+..+ 
T Consensus        68 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK-  146 (330)
T 2c20_A           68 IEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETK-  146 (330)
T ss_dssp             EEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHH-
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHH-
Confidence            99999999976421       145788999999999999999999999999988765432221 111112224555554 


Q ss_pred             ccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC----------CCc------------cceEEeccc----ccCCCCCccc
Q 044905          154 LTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP----------ESS------------YNVVVSAEA----SVDANDYKVA  205 (427)
Q Consensus       154 l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~----------~~~------------~~i~~~~~~----~~~~~~~~i~  205 (427)
                      ...|.++..+. +.|++++++||+ +++....          ...            ..+.+.+..    ......++||
T Consensus       147 ~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~  226 (330)
T 2c20_A          147 LAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIH  226 (330)
T ss_dssp             HHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEE
T ss_pred             HHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEe
Confidence            56788777665 569999999996 3322100          000            011121100    1111236899


Q ss_pred             HHHHHHHHHHHhcCcccc-cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          206 KSQIASLVADVFSNTAVA-ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~-~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++|+|++++.++.++... .+++||++++.   ..++.|++..+.+..+
T Consensus       227 v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  272 (330)
T 2c20_A          227 VEDLVAAHFLGLKDLQNGGESDFYNLGNGN---GFSVKEIVDAVREVTN  272 (330)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCEEEECCCTT---CBCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccccCCCCCeEEeCCCC---CccHHHHHHHHHHHhC
Confidence            999999999988754221 36899999887   5667777777766544

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.92  E-value=1.5e-24  Score=216.60  Aligned_cols=241  Identities=10%  Similarity=0.009  Sum_probs=164.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHH--CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLR--EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~--~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-   78 (427)
                      +.+|+|||||||||||++|++.|++  +|++|++++|+...............-.......++.++.+|++|.+++..+ 
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   87 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE   87 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence            3467999999999999999999999  9999999999765211000000000000011123567999999999999999 


Q ss_pred             hcCcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccc
Q 044905           79 IGNAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQP  153 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~  153 (427)
                      +.++|+|||+||.....     ..+++|+.++.+++++|++.+++ |||+||+++|+....+..+..+....+.|+.++ 
T Consensus        88 ~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK-  165 (362)
T 3sxp_A           88 KLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSK-  165 (362)
T ss_dssp             TSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHH-
T ss_pred             ccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHH-
Confidence            88999999999965431     15678899999999999999987 999999988766544322222323334566555 


Q ss_pred             ccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC------c----------cceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          154 LTVPEFLQKVIETDVSYTFIKTS-LTEDFSPES------S----------YNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       154 l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~------~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      ...|.++..+... +++++|||+ +++......      .          ..+...+.+  ....+++|++|+|++++.+
T Consensus       166 ~~~E~~~~~~~~~-~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~i~v~Dva~ai~~~  242 (362)
T 3sxp_A          166 LCMDEFVLSHSND-NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFG--EQLRDFVYIEDVIQANVKA  242 (362)
T ss_dssp             HHHHHHHHHTTTT-SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGG--CCEEECEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcc-CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCC--CeEEccEEHHHHHHHHHHH
Confidence            5678777776544 999999996 443322110      0          001111111  1223699999999999999


Q ss_pred             hcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          217 FSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +..+  ..| +||++++.   ..++.|++..+.+..+
T Consensus       243 ~~~~--~~g-~~~i~~~~---~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          243 MKAQ--KSG-VYNVGYSQ---ARSYNEIVSILKEHLG  273 (362)
T ss_dssp             TTCS--SCE-EEEESCSC---EEEHHHHHHHHHHHHC
T ss_pred             HhcC--CCC-EEEeCCCC---CccHHHHHHHHHHHcC
Confidence            9854  245 99999988   5677777777766544

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=6.6e-25  Score=214.84  Aligned_cols=227  Identities=9%  Similarity=0.041  Sum_probs=162.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.+++|||||||||||++|++.|+++|++|++++|+... ..+                ++.++.+|++|.+++.+++++
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l----------------~~~~~~~Dl~d~~~~~~~~~~   72 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP----------------NVEMISLDIMDSQRVKKVISD   72 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT----------------TEEEEECCTTCHHHHHHHHHH
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc----------------eeeEEECCCCCHHHHHHHHHh
Confidence            567899999999999999999999999999999998754 111                235899999999999999986


Q ss_pred             --cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHc-CCCeEEEEecccccccc--cCCC-CCCCCccchhhh
Q 044905           82 --AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAAS--TYNV-LDGISSFFNNLF  148 (427)
Q Consensus        82 --~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~--~~~~-~~~~~~~~~~~~  148 (427)
                        +|+|||++|....     +  ..+++|+.++.+++++|... ++++|||+||.++|+..  ...+ .+..+....+.|
T Consensus        73 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y  152 (321)
T 2pk3_A           73 IKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPY  152 (321)
T ss_dssp             HCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHH
T ss_pred             cCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCcc
Confidence              9999999997642     1  15678999999999999876 69999999999887653  2111 122122223455


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC--c------------c---ceEEecccccCCCCCcccHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES--S------------Y---NVVVSAEASVDANDYKVAKSQI  209 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~--~------------~---~i~~~~~~~~~~~~~~i~v~DV  209 (427)
                      +.++ ...|.++..+. +.|++++++||+ +++......  .            .   .+...+.+.  ...++++++|+
T Consensus       153 ~~sK-~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~v~v~Dv  229 (321)
T 2pk3_A          153 GVSK-ASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLE--AVRDFTDVRDI  229 (321)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSS--CEEEEEEHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCC--cEEeeEEHHHH
Confidence            5554 56777776654 459999999997 333322110  0            0   111111111  12358999999


Q ss_pred             HHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          210 ASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       210 A~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      |++++.++.++  ..+++||++++.   ..++.|++..+.+..+
T Consensus       230 a~a~~~~~~~~--~~g~~~~i~~~~---~~s~~e~~~~i~~~~g  268 (321)
T 2pk3_A          230 VQAYWLLSQYG--KTGDVYNVCSGI---GTRIQDVLDLLLAMAN  268 (321)
T ss_dssp             HHHHHHHHHHC--CTTCEEEESCSC---EEEHHHHHHHHHHHSS
T ss_pred             HHHHHHHHhCC--CCCCeEEeCCCC---CeeHHHHHHHHHHHhC
Confidence            99999998754  357899999987   6778888888876544

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=1.9e-24  Score=213.42  Aligned_cols=238  Identities=9%  Similarity=0.087  Sum_probs=162.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ||+|||||||||||++|++.|+++|++|++++|+.. ..........        ...++.++.+|++|.+++.+++++ 
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~--------~~~~~~~~~~Dl~d~~~~~~~~~~~   72 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS--------SLGNFEFVHGDIRNKNDVTRLITKY   72 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH--------TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc--------cCCceEEEEcCCCCHHHHHHHHhcc
Confidence            579999999999999999999999999999998542 2111111000        023567899999999999999988 


Q ss_pred             -cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCC-eEEEEecccccccccCCC----------------
Q 044905           82 -AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGNTTAASTYNV----------------  136 (427)
Q Consensus        82 -~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~v~~~~~~~~----------------  136 (427)
                       +|+|||+++....     +  ..+++|+.++.+++++|...+++ +|||+||.++|+......                
T Consensus        73 ~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~  152 (347)
T 1orr_A           73 MPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNG  152 (347)
T ss_dssp             CCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTC
T ss_pred             CCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccC
Confidence             9999999997542     1  14678999999999999999986 999999998876432110                


Q ss_pred             -CCCCCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCCC-CCCCCCCC-----cc---------------ceEEec
Q 044905          137 -LDGISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTSL-TEDFSPES-----SY---------------NVVVSA  193 (427)
Q Consensus       137 -~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG~-~~~~~~~~-----~~---------------~i~~~~  193 (427)
                       .+..+....+.|+.++ ...|.++..+. +.|+++++||||. ++......     ..               .+...+
T Consensus       153 ~~e~~~~~~~~~Y~~sK-~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  231 (347)
T 1orr_A          153 YDESTQLDFHSPYGCSK-GAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISG  231 (347)
T ss_dssp             BCTTSCCCCCHHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEES
T ss_pred             ccccCCCCCCCchHHHH-HHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEec
Confidence             0111111234555554 56787777655 4589999999973 33321110     00               111111


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          194 EASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       194 ~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      .+.  ...++++++|+|++++.++.++....|++||++++.. ...++.|++..+.+..+
T Consensus       232 ~g~--~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~-~~~s~~e~~~~i~~~~g  288 (347)
T 1orr_A          232 NGK--QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIV-NSLSLLELFKLLEDYCN  288 (347)
T ss_dssp             SSC--CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGG-GEEEHHHHHHHHHHHHT
T ss_pred             CCc--ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCC-CCccHHHHHHHHHHHhC
Confidence            111  1225899999999999998753334688999998741 02577777777766533

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.92  E-value=1.8e-24  Score=208.51  Aligned_cols=215  Identities=10%  Similarity=0.059  Sum_probs=152.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +||+|||||| ||||++|++.|+++||+|++++|++.+...+...             +++++.+|++|.+     +.++
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------------~~~~~~~D~~d~~-----~~~~   64 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-------------GAEPLLWPGEEPS-----LDGV   64 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHT-------------TEEEEESSSSCCC-----CTTC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhC-------------CCeEEEecccccc-----cCCC
Confidence            4679999998 9999999999999999999999998876655443             3458999999944     8899


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHH--cCCCeEEEEecccccccccCCCC-CCCCccchhhhhccccccHHHH
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL--AGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQPLTVPEF  159 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~--~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~l~~E~~  159 (427)
                      |+|||+++.....    .  ..+.+++++|+.  .++++|||+||+++|+.....+. +..+....+.|+..+ +..|.+
T Consensus        65 d~vi~~a~~~~~~----~--~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK-~~~E~~  137 (286)
T 3ius_A           65 THLLISTAPDSGG----D--PVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWR-VMAEQQ  137 (286)
T ss_dssp             CEEEECCCCBTTB----C--HHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHH-HHHHHH
T ss_pred             CEEEECCCccccc----c--HHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHH-HHHHHH
Confidence            9999999975422    1  245789999999  78999999999998766543221 222222234565554 557766


Q ss_pred             HHHHhcCCCeEEEEeCC-CCCCCCCC---Cc--cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          160 LQKVIETDVSYTFIKTS-LTEDFSPE---SS--YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       160 l~~l~~~gl~~tilRPG-~~~~~~~~---~~--~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      +..+  .+++++++||+ +++.....   ..  ..+.+.+..   ...++||++|+|++++.++.++.  .+++||++++
T Consensus       138 ~~~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~---~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~i~~~  210 (286)
T 3ius_A          138 WQAV--PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPG---QVFSRIHVEDIAQVLAASMARPD--PGAVYNVCDD  210 (286)
T ss_dssp             HHHS--TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTT---CCBCEEEHHHHHHHHHHHHHSCC--TTCEEEECCS
T ss_pred             HHhh--cCCCEEEEeccceECCCchHHHHHhcCCccccCCCC---cccceEEHHHHHHHHHHHHhCCC--CCCEEEEeCC
Confidence            6654  59999999997 33322111   00  112222221   22369999999999999998653  6789999998


Q ss_pred             CCCChhhHHHHHHHHHhccc
Q 044905          234 PSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       234 ~~~~~~s~~ell~~i~~~~~  253 (427)
                      .   ..++.|++..+.+..+
T Consensus       211 ~---~~s~~e~~~~i~~~~g  227 (286)
T 3ius_A          211 E---PVPPQDVIAYAAELQG  227 (286)
T ss_dssp             C---CBCHHHHHHHHHHHHT
T ss_pred             C---CccHHHHHHHHHHHcC
Confidence            8   4566666666665433

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.92  E-value=7.5e-26  Score=218.61  Aligned_cols=226  Identities=12%  Similarity=0.129  Sum_probs=159.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+|+||||| +||||++|++.|+++|++|++++|+.+..                 ..+++++.+|++|.+++.+++++
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------~~~~~~~~~Dl~d~~~~~~~~~~   62 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------------PAGVQTLIADVTRPDTLASIVHL   62 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------------CTTCCEEECCTTCGGGCTTGGGG
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------ccCCceEEccCCChHHHHHhhcC
Confidence            6678999999 59999999999999999999999987642                 13456899999999999999988


Q ss_pred             -cCEEEEccCCCCC--CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccccccHH
Q 044905           82 -AGKVVVTIGPTED--GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQPLTVP  157 (427)
Q Consensus        82 -~d~Vi~~ag~~~~--~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~l~~E  157 (427)
                       +|+|||+++....  ....++|+.++.+++++|++.++++|||+||+++|+.....+. +..+....+.|+.++ +.+|
T Consensus        63 ~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK-~~~E  141 (286)
T 3gpi_A           63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRM-LEAE  141 (286)
T ss_dssp             CCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHH-HHHH
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHH-HHHH
Confidence             9999999986432  2256889999999999999999999999999998776543221 222222234565554 4456


Q ss_pred             HHHHHHhcCCCeEEEEeCC-CCCCCCCCCccceEE-ecccccCCCCCcccHHHHHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          158 EFLQKVIETDVSYTFIKTS-LTEDFSPESSYNVVV-SAEASVDANDYKVAKSQIASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       158 ~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      .+ .   .. ++++++||+ +++.........+.. ..........+++|++|+|++++.++.++. ...+++||++++.
T Consensus       142 ~~-~---~~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~  216 (286)
T 3gpi_A          142 AL-L---AA-YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQ  216 (286)
T ss_dssp             HH-G---GG-SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSC
T ss_pred             HH-H---hc-CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCC
Confidence            55 2   23 999999997 443322111001100 001111222368999999999999987531 3468999999987


Q ss_pred             CCChhhHHHHHHHHHhccch
Q 044905          235 SAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       235 ~~~~~s~~ell~~i~~~~~~  254 (427)
                         ..++.|++..+.+..+.
T Consensus       217 ---~~s~~e~~~~i~~~~g~  233 (286)
T 3gpi_A          217 ---PLPVHDLLRWLADRQGI  233 (286)
T ss_dssp             ---CEEHHHHHHHHHHHTTC
T ss_pred             ---CCCHHHHHHHHHHHcCC
Confidence               56777777777765443

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.92  E-value=3.3e-25  Score=215.44  Aligned_cols=221  Identities=17%  Similarity=0.162  Sum_probs=155.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +|+|+||||||++|++|++.|+++| ++|++++|++++.  ..+..             .+++++.+|++|++++.++++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~-------------~~~~~~~~D~~d~~~l~~~~~   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL-------------QGAEVVQGDQDDQVIMELALN   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH-------------TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH-------------CCCEEEEecCCCHHHHHHHHh
Confidence            4789999999999999999999999 9999999998753  22222             234689999999999999999


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHH
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL  160 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l  160 (427)
                      ++|+|||+++..... ....++.++.+++++|+++|++|||++|+.+++.....    .   +. ..|...+ ...|.++
T Consensus        72 ~~d~vi~~a~~~~~~-~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~----~---~~-~~y~~sK-~~~e~~~  141 (299)
T 2wm3_A           72 GAYATFIVTNYWESC-SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAG----R---LA-AAHFDGK-GEVEEYF  141 (299)
T ss_dssp             TCSEEEECCCHHHHT-CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTT----S---CC-CHHHHHH-HHHHHHH
T ss_pred             cCCEEEEeCCCCccc-cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCC----c---cc-CchhhHH-HHHHHHH
Confidence            999999999853211 24456778999999999999999999776665432111    0   11 1222222 2355554


Q ss_pred             HHHhcCCCeEEEEeCC-CCCCCCCCCccce-------EEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEec
Q 044905          161 QKVIETDVSYTFIKTS-LTEDFSPESSYNV-------VVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFT  232 (427)
Q Consensus       161 ~~l~~~gl~~tilRPG-~~~~~~~~~~~~i-------~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~  232 (427)
                      +   ++|++|++|||| +++++........       .+..+ ......++++++|+|++++.++.+++.+.|++|++++
T Consensus       142 ~---~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g  217 (299)
T 2wm3_A          142 R---DIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLP-TGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST  217 (299)
T ss_dssp             H---HHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCC-CTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS
T ss_pred             H---HCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEec-CCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee
Confidence            3   479999999998 5555322111100       11111 1122346899999999999999865445689999987


Q ss_pred             CCCCChhhHHHHHHHHHhccchh
Q 044905          233 DPSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       233 ~~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      +    ..++.|++..+.+..++.
T Consensus       218 ~----~~s~~e~~~~~~~~~g~~  236 (299)
T 2wm3_A          218 C----RHTAEEYAALLTKHTRKV  236 (299)
T ss_dssp             E----EECHHHHHHHHHHHHSSC
T ss_pred             c----cCCHHHHHHHHHHHHCCC
Confidence            4    578888888888765443

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=1.1e-24  Score=215.63  Aligned_cols=231  Identities=12%  Similarity=0.073  Sum_probs=162.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ||+|||||||||||++|++.|+++  |++|++++|+...  ...+..          ....+++++.+|++|.+++.+++
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~~Dl~d~~~~~~~~   73 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA----------ILGDRVELVVGDIADAELVDKLA   73 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG----------GCSSSEEEEECCTTCHHHHHHHH
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhh----------hccCCeEEEECCCCCHHHHHHHh
Confidence            679999999999999999999999  8999999997531  111100          00145678999999999999999


Q ss_pred             cCcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-------------CCCCC
Q 044905           80 GNAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-------------NVLDG  139 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-------------~~~~~  139 (427)
                      +++|+|||++|....     ++  .+++|+.++.+++++|...++ +|||+||.++|+....             +..+.
T Consensus        74 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~  152 (348)
T 1oc2_A           74 AKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE  152 (348)
T ss_dssp             TTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT
T ss_pred             hcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCC
Confidence            999999999997642     11  457888999999999999998 9999999988754321             11111


Q ss_pred             CCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-c----------ceEEecccccCCCCCccc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-Y----------NVVVSAEASVDANDYKVA  205 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-~----------~i~~~~~~~~~~~~~~i~  205 (427)
                      .+....+.|+.++ ...|.++..+. +.|++++++||+ +++..... .. .          .+.+.+.+.  ...+++|
T Consensus       153 ~~~~~~~~Y~~sK-~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~  229 (348)
T 1oc2_A          153 TNYNPSSPYSSTK-AASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGK--NVRDWIH  229 (348)
T ss_dssp             SCCCCCSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSC--CEEECEE
T ss_pred             CCCCCCCccHHHH-HHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCC--ceEeeEE
Confidence            1112224555554 56777777655 468999999997 33332211 00 0          011111111  1226899


Q ss_pred             HHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          206 KSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++|+|++++.++.++  ..+++||++++.   ..++.|++..+.+..+
T Consensus       230 v~Dva~~~~~~~~~~--~~g~~~~i~~~~---~~s~~e~~~~i~~~~g  272 (348)
T 1oc2_A          230 TNDHSTGVWAILTKG--RMGETYLIGADG---EKNNKEVLELILEKMG  272 (348)
T ss_dssp             HHHHHHHHHHHHHHC--CTTCEEEECCSC---EEEHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhhCC--CCCCeEEeCCCC---CCCHHHHHHHHHHHhC
Confidence            999999999988743  368899999987   6677888887776544

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.92  E-value=4.4e-25  Score=214.09  Aligned_cols=222  Identities=11%  Similarity=0.046  Sum_probs=157.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+|+|||||||||||++|++.|+++|+      +...                  ...+++++.+|++|.+++.+++++
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------------~~~~~~~~~~D~~d~~~~~~~~~~   59 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------------------DWVFVSSKDADLTDTAQTRALFEK   59 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------------------EEEECCTTTCCTTSHHHHHHHHHH
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------------------cccccCceecccCCHHHHHHHHhh
Confidence            6788999999999999999999999998      1110                  012334668999999999999987


Q ss_pred             --cCEEEEccCCCCC------CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC-----Cccchh
Q 044905           82 --AGKVVVTIGPTED------GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI-----SSFFNN  146 (427)
Q Consensus        82 --~d~Vi~~ag~~~~------~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~-----~~~~~~  146 (427)
                        +|+|||+++....      ++  ..++|+.++.+++++|++.++++|||+||+++|+.....+..+.     +....+
T Consensus        60 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  139 (319)
T 4b8w_A           60 VQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSN  139 (319)
T ss_dssp             SCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSS
T ss_pred             cCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCc
Confidence              9999999998541      11  56889999999999999999999999999998765443222111     111112


Q ss_pred             -hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----------c----------cceEEecccccCCCCCc
Q 044905          147 -LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----------S----------YNVVVSAEASVDANDYK  203 (427)
Q Consensus       147 -~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----------~----------~~i~~~~~~~~~~~~~~  203 (427)
                       .|+.++ +..|.++..+. +.+++++++||+ +++......          .          ..+.+.+.+.  ...++
T Consensus       140 ~~Y~~sK-~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~  216 (319)
T 4b8w_A          140 FGYSYAK-RMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGN--PRRQF  216 (319)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSC--CEECE
T ss_pred             chHHHHH-HHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCC--eeEEE
Confidence             355444 56787776655 569999999997 333322100          0          0122222221  22368


Q ss_pred             ccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          204 VAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ||++|+|++++.++.++....+++||++++.   ..++.|++..+.+..+
T Consensus       217 i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  263 (319)
T 4b8w_A          217 IYSLDLAQLFIWVLREYNEVEPIILSVGEED---EVSIKEAAEAVVEAMD  263 (319)
T ss_dssp             EEHHHHHHHHHHHHHHCCCSSCEEECCCGGG---CEEHHHHHHHHHHHTT
T ss_pred             EeHHHHHHHHHHHHhccccCCceEEEecCCC---ceeHHHHHHHHHHHhC
Confidence            9999999999999976444567899999887   5677777777766544

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.92  E-value=7.5e-24  Score=209.60  Aligned_cols=236  Identities=12%  Similarity=0.113  Sum_probs=161.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch----------HHHHHHHHhhhhhhhhhhhccceEEEecCCCHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA----------AQELARLAASYKILSKEELKRLNAVESNFDSAE   73 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~----------~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~   73 (427)
                      +|+|||||||||||++|++.|+++|++|++++|+...          ...+...          ...++.++.+|++|.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~----------~~~~~~~~~~D~~~~~   71 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------TGRSVEFEEMDILDQG   71 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------HTCCCEEEECCTTCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc----------cCCceEEEECCCCCHH
Confidence            4799999999999999999999999999999986432          2222110          0235678999999999


Q ss_pred             HHHHHhc--CcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCcc
Q 044905           74 SIAKAIG--NAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISSF  143 (427)
Q Consensus        74 sl~~al~--g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~~  143 (427)
                      ++.++++  ++|+|||+++....     +  ..+++|+.++.+++++|++.++++|||+||.++|+.....+..+ .+..
T Consensus        72 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~  151 (348)
T 1ek6_A           72 ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTG  151 (348)
T ss_dssp             HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             HHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCC
Confidence            9999998  89999999997542     1  14578899999999999999999999999998876433222111 1111


Q ss_pred             c-hhhhhccccccHHHHHHHHhcCC--CeEEEEeCC-CCCCCC------------CCC-----------ccceEEeccc-
Q 044905          144 F-NNLFSRNQPLTVPEFLQKVIETD--VSYTFIKTS-LTEDFS------------PES-----------SYNVVVSAEA-  195 (427)
Q Consensus       144 ~-~~~~~k~~~l~~E~~l~~l~~~g--l~~tilRPG-~~~~~~------------~~~-----------~~~i~~~~~~-  195 (427)
                      . .+.|+.++ ...|.++..+...+  ++++++||+ +++...            ...           ...+.+.+.. 
T Consensus       152 p~~~~Y~~sK-~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  230 (348)
T 1ek6_A          152 GCTNPYGKSK-FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY  230 (348)
T ss_dssp             CCSSHHHHHH-HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCCCchHHHH-HHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcc
Confidence            1 34555554 56788877765324  999999986 332210            000           0011111100 


Q ss_pred             ---ccCCCCCcccHHHHHHHHHHHhcCcccccC-cEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          196 ---SVDANDYKVAKSQIASLVADVFSNTAVAEN-KVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       196 ---~~~~~~~~i~v~DVA~~v~~al~~~~~~~g-~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                         ......++||++|+|++++.++.++....+ ++||++++.   ..++.|++..+.+..+
T Consensus       231 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~---~~s~~e~~~~i~~~~g  289 (348)
T 1ek6_A          231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGT---GYSVLQMVQAMEKASG  289 (348)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSC---CEEHHHHHHHHHHHHC
T ss_pred             cCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCC---CccHHHHHHHHHHHhC
Confidence               111123689999999999998875422234 899999887   5677777777766544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=4.5e-24  Score=210.23  Aligned_cols=236  Identities=8%  Similarity=0.052  Sum_probs=163.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |.+|+|||||||||||++|++.|+++|  ++|++++|+..  ....+...         ....++.++.+|++|.+++.+
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~   71 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDL---------EDDPRYTFVKGDVADYELVKE   71 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTT---------TTCTTEEEEECCTTCHHHHHH
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhh---------ccCCceEEEEcCCCCHHHHHH
Confidence            556799999999999999999999997  99999998752  11111100         012356789999999999999


Q ss_pred             HhcCcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCC-CeEEEEecccccccccCCCC-CCCCccchhhh
Q 044905           78 AIGNAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGV-GHVAIIYDGNTTAASTYNVL-DGISSFFNNLF  148 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gV-k~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~  148 (427)
                      ++.++|+|||++|....     ++  .+++|+.++.+++++|...++ ++|||+||.++|+.....+. +..+....+.|
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  151 (336)
T 2hun_A           72 LVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPY  151 (336)
T ss_dssp             HHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHH
T ss_pred             HhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCcc
Confidence            99999999999997542     11  567899999999999999875 79999999988765322111 11111223455


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-----------cceEEecccccCCCCCcccHHHHHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-----------YNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +.++ ...|.++..+. +.|++++++||+ +++..... ..           ..+...+.+.  ...+++|++|+|++++
T Consensus       152 ~~sK-~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~  228 (336)
T 2hun_A          152 SATK-AASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGK--NVRDWLYVEDHVRAIE  228 (336)
T ss_dssp             HHHH-HHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC-----CEEEEEHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCC--ceeeeEEHHHHHHHHH
Confidence            5554 56788777665 579999999997 33332211 00           0111111111  1126899999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      .++.+.  ..+++||++++.   ..++.|++..+.+..+.
T Consensus       229 ~~~~~~--~~g~~~~v~~~~---~~s~~e~~~~i~~~~g~  263 (336)
T 2hun_A          229 LVLLKG--ESREIYNISAGE---EKTNLEVVKIILRLMGK  263 (336)
T ss_dssp             HHHHHC--CTTCEEEECCSC---EECHHHHHHHHHHHTTC
T ss_pred             HHHhCC--CCCCEEEeCCCC---cccHHHHHHHHHHHhCC
Confidence            988643  368899999987   56777887777665443

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.91  E-value=3.1e-24  Score=211.31  Aligned_cols=235  Identities=12%  Similarity=0.028  Sum_probs=164.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .++|+|||||||||||++|++.|+++|++|++++|+....  ..+....         ...++.++.+|++|.+++.+++
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~   82 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---------IEGDIQYEDGDMADACSVQRAV   82 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---------CGGGEEEEECCTTCHHHHHHHH
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---------ccCceEEEECCCCCHHHHHHHH
Confidence            4678999999999999999999999999999999987642  2221110         1235678999999999999999


Q ss_pred             cC--cCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCC-CeEEEEecccccccccCCCC-CCCCccchhhh
Q 044905           80 GN--AGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGV-GHVAIIYDGNTTAASTYNVL-DGISSFFNNLF  148 (427)
Q Consensus        80 ~g--~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gV-k~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~  148 (427)
                      ++  +|+|||+++....     ++  .+++|+.++.+++++|...++ ++|||+||.++|+.....+. +..+....+.|
T Consensus        83 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  162 (335)
T 1rpn_A           83 IKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPY  162 (335)
T ss_dssp             HHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             HHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChh
Confidence            86  5999999997542     11  457888899999999999996 99999999988765433221 11111222355


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc--------------c--ceEEecccccCCCCCcccHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS--------------Y--NVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~--------------~--~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      +.++ +..|.++..+. +.+++++++||+ .++.......              .  .....+.+  ....+++|++|+|
T Consensus       163 ~~sK-~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g--~~~~~~i~v~Dva  239 (335)
T 1rpn_A          163 GVAK-LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNV--DAKRDWGFAGDYV  239 (335)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCT--TCEEECEEHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCC--cceeceEEHHHHH
Confidence            5554 56787777665 458999999985 3332111100              0  01111111  1123689999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++++.++.++.   +++||++++.   ..++.|++..+.+..+.
T Consensus       240 ~a~~~~~~~~~---~~~~ni~~~~---~~s~~e~~~~i~~~~g~  277 (335)
T 1rpn_A          240 EAMWLMLQQDK---ADDYVVATGV---TTTVRDMCQIAFEHVGL  277 (335)
T ss_dssp             HHHHHHHHSSS---CCCEEECCSC---EEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHHhcCC---CCEEEEeCCC---CccHHHHHHHHHHHhCC
Confidence            99999997642   5899999987   67888888888776554

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=6.3e-24  Score=209.44  Aligned_cols=232  Identities=13%  Similarity=0.088  Sum_probs=163.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC---C---CeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE---G---FSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~---G---~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |+|||||||||||++|++.|+++   |   ++|++++|+...  ...+...         ....++.++.+|++|.+++.
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~   71 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV---------DADPRLRFVHGDIRDAGLLA   71 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG---------TTCTTEEEEECCTTCHHHHH
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhc---------ccCCCeEEEEcCCCCHHHHH
Confidence            58999999999999999999997   8   999999997531  1111100         01235678999999999999


Q ss_pred             HHhcCcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhh
Q 044905           77 KAIGNAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLF  148 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~  148 (427)
                      +++.++|+|||+++....     ++  .+++|+.++.+++++|...++++|||+||.++|+...... .+..+....+.|
T Consensus        72 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y  151 (337)
T 1r6d_A           72 RELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY  151 (337)
T ss_dssp             HHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH
T ss_pred             HHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCch
Confidence            999999999999997542     11  4578889999999999999999999999998876542211 111121223455


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-----------cceEEecccccCCCCCcccHHHHHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-----------YNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +.++ ...|.++..+. +.|++++++||+ +++..... ..           ..+.+.+.+.  ...+++|++|+|++++
T Consensus       152 ~~sK-~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~a~~  228 (337)
T 1r6d_A          152 AASK-AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGA--NVREWVHTDDHCRGIA  228 (337)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSC--CEEEEEEHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCC--eeEeeEeHHHHHHHHH
Confidence            5554 56777776655 568999999997 33332211 00           0111112111  1126899999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      .++.++  ..+++||++++.   ..++.|++..+.+..+
T Consensus       229 ~~~~~~--~~g~~~~v~~~~---~~s~~e~~~~i~~~~g  262 (337)
T 1r6d_A          229 LVLAGG--RAGEIYHIGGGL---ELTNRELTGILLDSLG  262 (337)
T ss_dssp             HHHHHC--CTTCEEEECCCC---EEEHHHHHHHHHHHHT
T ss_pred             HHHhCC--CCCCEEEeCCCC---CccHHHHHHHHHHHhC
Confidence            988743  367899999987   5677788877766544

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=2.4e-24  Score=203.01  Aligned_cols=201  Identities=10%  Similarity=0.118  Sum_probs=140.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+|++||||||||+||++|++.|+++| ++|++++|++++...+.             ..++.++.+|++|.+++.++++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-------------~~~~~~~~~Dl~d~~~~~~~~~   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-------------PTNSQIIMGDVLNHAALKQAMQ   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-------------CTTEEEEECCTTCHHHHHHHHT
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-------------cCCcEEEEecCCCHHHHHHHhc
Confidence            567789999999999999999999999 99999999987543321             1345689999999999999999


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC---CCCCccchhhhhccccccHH
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL---DGISSFFNNLFSRNQPLTVP  157 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~---~~~~~~~~~~~~k~~~l~~E  157 (427)
                      ++|+|||+++...    .   ...+.+++++|++.++++||++||.+++........   ..........|.     ..+
T Consensus        88 ~~D~vv~~a~~~~----~---~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  155 (236)
T 3qvo_A           88 GQDIVYANLTGED----L---DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFR-----RAA  155 (236)
T ss_dssp             TCSEEEEECCSTT----H---HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHH-----HHH
T ss_pred             CCCEEEEcCCCCc----h---hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHH-----HHH
Confidence            9999999998632    1   135788999999999999999999887654322111   111111111121     133


Q ss_pred             HHHHHHhcCCCeEEEEeCCC-CCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCC
Q 044905          158 EFLQKVIETDVSYTFIKTSL-TEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPS  235 (427)
Q Consensus       158 ~~l~~l~~~gl~~tilRPG~-~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~  235 (427)
                         +.+...|++|++||||+ +++...    ............+ .+++.+|||++++.++.++..+.++.|+++++..
T Consensus       156 ---~~l~~~gi~~~~vrPg~i~~~~~~----~~~~~~~~~~~~~-~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~  226 (236)
T 3qvo_A          156 ---DAIEASGLEYTILRPAWLTDEDII----DYELTSRNEPFKG-TIVSRKSVAALITDIIDKPEKHIGENIGINQPGT  226 (236)
T ss_dssp             ---HHHHTSCSEEEEEEECEEECCSCC----CCEEECTTSCCSC-SEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred             ---HHHHHCCCCEEEEeCCcccCCCCc----ceEEeccCCCCCC-cEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence               33457899999999994 433221    1112111122111 4799999999999999877657899999999853

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.91  E-value=2.9e-24  Score=213.71  Aligned_cols=237  Identities=11%  Similarity=0.002  Sum_probs=163.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+|+|||||||||||++|++.|+++|++|++++|++.....+.....        ...++.++.+|++|.+++.+++++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~   78 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------VADGMQSEIGDIRDQNKLLESIRE   78 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------TTTTSEEEECCTTCHHHHHHHHHH
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--------cCCceEEEEccccCHHHHHHHHHh
Confidence            346799999999999999999999999999999998765433322100        023567899999999999999986


Q ss_pred             --cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccC--CCCCCCCccchhhhh
Q 044905           82 --AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTY--NVLDGISSFFNNLFS  149 (427)
Q Consensus        82 --~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~--~~~~~~~~~~~~~~~  149 (427)
                        +|+|||++|....     +  ..+++|+.++.+++++|...+ +++|||+||.++|+....  ...+..+....+.|+
T Consensus        79 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~  158 (357)
T 1rkx_A           79 FQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYS  158 (357)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHH
T ss_pred             cCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccH
Confidence              8999999995321     1  145688889999999999987 899999999998765432  111111112234555


Q ss_pred             ccccccHHHHHHHHhc----------CCCeEEEEeCC-CCCCCCCC---Ccc----------ceEEecccccCCCCCccc
Q 044905          150 RNQPLTVPEFLQKVIE----------TDVSYTFIKTS-LTEDFSPE---SSY----------NVVVSAEASVDANDYKVA  205 (427)
Q Consensus       150 k~~~l~~E~~l~~l~~----------~gl~~tilRPG-~~~~~~~~---~~~----------~i~~~~~~~~~~~~~~i~  205 (427)
                      .++ ...|.++..+..          .|++++++||| +++.....   ...          .+.+.+   .....+++|
T Consensus       159 ~sK-~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~v~  234 (357)
T 1rkx_A          159 NSK-GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRN---PHAIRPWQH  234 (357)
T ss_dssp             HHH-HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSC---TTCEECCEE
T ss_pred             HHH-HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECC---CCCeeccEe
Confidence            554 567777766542          28999999997 33322110   000          111111   112236999


Q ss_pred             HHHHHHHHHHHhcCc---ccccCcEEEEecC--CCCChhhHHHHHHHHHhccc
Q 044905          206 KSQIASLVADVFSNT---AVAENKVVKVFTD--PSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       206 v~DVA~~v~~al~~~---~~~~g~~~nI~~~--~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++|+|++++.++.+.   ....+++||++++  .   ..++.|++..+.+..+
T Consensus       235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~---~~s~~e~~~~i~~~~g  284 (357)
T 1rkx_A          235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDAD---ATPVKNIVEQMVKYWG  284 (357)
T ss_dssp             THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGG---CEEHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCC---cccHHHHHHHHHHHhC
Confidence            999999999888631   1245789999974  3   4677778777766544

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.91  E-value=9.4e-24  Score=209.68  Aligned_cols=218  Identities=20%  Similarity=0.186  Sum_probs=149.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |.+|+|+||||||++|++|++.|+++|++|++++|+++    +...+...          ...+++++.+|+.|.+++.+
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l----------~~~~v~~~~~Dl~d~~~l~~   77 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL----------EDKGAIIVYGLINEQEAMEK   77 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH----------HHTTCEEEECCTTCHHHHHH
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH----------HhCCcEEEEeecCCHHHHHH
Confidence            44578999999999999999999999999999999872    22222111          12456799999999999999


Q ss_pred             Hhc--CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhccccc
Q 044905           78 AIG--NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        78 al~--g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l  154 (427)
                      +++  ++|+|||+++..        |+.++.+++++|+++| +++||+ |+.   + .......+..+  ...|+..+ .
T Consensus        78 ~~~~~~~d~Vi~~a~~~--------n~~~~~~l~~aa~~~g~v~~~v~-S~~---g-~~~~e~~~~~p--~~~y~~sK-~  141 (346)
T 3i6i_A           78 ILKEHEIDIVVSTVGGE--------SILDQIALVKAMKAVGTIKRFLP-SEF---G-HDVNRADPVEP--GLNMYREK-R  141 (346)
T ss_dssp             HHHHTTCCEEEECCCGG--------GGGGHHHHHHHHHHHCCCSEEEC-SCC---S-SCTTTCCCCTT--HHHHHHHH-H
T ss_pred             HHhhCCCCEEEECCchh--------hHHHHHHHHHHHHHcCCceEEee-ccc---C-CCCCccCcCCC--cchHHHHH-H
Confidence            999  999999999862        4457899999999999 999984 322   2 11111122222  23344333 3


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCc---------cceEEecccccCCCCCcccHHHHHHHHHHHhcCccccc
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSPESS---------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAE  224 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~---------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~  224 (427)
                      ..|+++   .+.|++|+++||| +++.+.+...         ..+.+.+.+  ....++++++|+|++++.++.++ ...
T Consensus       142 ~~e~~l---~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g--~~~~~~i~~~Dva~~~~~~l~~~-~~~  215 (346)
T 3i6i_A          142 RVRQLV---EESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDG--NVKAYFVAGTDIGKFTMKTVDDV-RTL  215 (346)
T ss_dssp             HHHHHH---HHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTS--CCCEEEECHHHHHHHHHHHTTCG-GGT
T ss_pred             HHHHHH---HHcCCCEEEEEecccccccCccccccccccCCCceEEEccCC--CceEEecCHHHHHHHHHHHHhCc-ccc
Confidence            355444   3589999999998 5554432211         112222222  22346999999999999999876 456


Q ss_pred             CcEEEEec-CCCCChhhHHHHHHHHHhccch
Q 044905          225 NKVVKVFT-DPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       225 g~~~nI~~-~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +++|++.+ +.   ..++.|++..+.+..++
T Consensus       216 ~~~~~i~g~~~---~~s~~e~~~~~~~~~g~  243 (346)
T 3i6i_A          216 NKSVHFRPSCN---CLNINELASVWEKKIGR  243 (346)
T ss_dssp             TEEEECCCGGG---EECHHHHHHHHHHHHTS
T ss_pred             CeEEEEeCCCC---CCCHHHHHHHHHHHHCC
Confidence            89999984 34   57778888888776554

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.91  E-value=4.9e-24  Score=210.27  Aligned_cols=229  Identities=10%  Similarity=0.102  Sum_probs=158.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~g~   82 (427)
                      |+|||||||||||++|++.|+++ |++|++++|+..+...+.            ...+++++.+|++| .+.+.++++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------NHPHFHFVEGDISIHSEWIEYHVKKC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------TCTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------------cCCCeEEEeccccCcHHHHHhhccCC
Confidence            58999999999999999999998 899999999876543221            12356789999998 46788899999


Q ss_pred             CEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CC-----c--cchhh
Q 044905           83 GKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-IS-----S--FFNNL  147 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~-----~--~~~~~  147 (427)
                      |+|||++|....     +  ..+++|+.++.+++++|...+ ++|||+||.++|+........+ .+     +  ...+.
T Consensus        69 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~  147 (345)
T 2bll_A           69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI  147 (345)
T ss_dssp             SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGH
T ss_pred             CEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccc
Confidence            999999987542     1  145678889999999999999 8999999998876543221111 11     0  11235


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----------c----------cceEEecccccCCCCCccc
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----------S----------YNVVVSAEASVDANDYKVA  205 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----------~----------~~i~~~~~~~~~~~~~~i~  205 (427)
                      |+..+ ...|.++..+. +.|++++++||+ +++......          .          ..+...+.+.  ...+++|
T Consensus       148 Y~~sK-~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~i~  224 (345)
T 2bll_A          148 YSVSK-QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK--QKRCFTD  224 (345)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC--CEEECEE
T ss_pred             cHHHH-HHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCC--EEEEEEE
Confidence            55554 56787776654 569999999997 333321100          0          0111111111  1226999


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++|+|++++.++.++.. ..+++||++++..  ..++.|++..+.+.
T Consensus       225 v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~--~~s~~e~~~~i~~~  269 (345)
T 2bll_A          225 IRDGIEALYRIIENAGNRCDGEIINIGNPEN--EASIEELGEMLLAS  269 (345)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTTEEEEECCTTS--EEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccccCCCceEEeCCCCC--CCCHHHHHHHHHHH
Confidence            99999999999986532 4688999998730  35666666666554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.91  E-value=3e-24  Score=209.09  Aligned_cols=228  Identities=10%  Similarity=0.007  Sum_probs=163.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +|+|||||||||||++|++.|+++  |++|++++|+..... +.              .++.++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--------------~~~~~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--------------NSGPFEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--------------HSSCEEECCTTCHHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--------------CCCceEEecCCCHHHHHHHHhh
Confidence            468999999999999999999999  899999999876522 11              134589999999999999998 


Q ss_pred             -CcCEEEEccCCCCC----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-CCC-CCCCccchhhhhcc
Q 044905           81 -NAGKVVVTIGPTED----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-NVL-DGISSFFNNLFSRN  151 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-~~~-~~~~~~~~~~~~k~  151 (427)
                       ++|+|||+++....    +  ..+++|+.++.+++++|++.++++|||+||.++|+.... .+. +..+....+.|+..
T Consensus        67 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~s  146 (312)
T 2yy7_A           67 HKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGIS  146 (312)
T ss_dssp             TTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHH
T ss_pred             cCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHH
Confidence             89999999997532    1  146788899999999999999999999999988765322 111 11111223455555


Q ss_pred             ccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC------c----------cceEEecccccCCCCCcccHHHHHHHH
Q 044905          152 QPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES------S----------YNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       152 ~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~------~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      + +..|.++..+. +.|++++++||+ +++....+.      .          ..+...+  ......+++|++|+|+++
T Consensus       147 K-~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~  223 (312)
T 2yy7_A          147 K-QAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFL--SSETKMPMMYMDDAIDAT  223 (312)
T ss_dssp             H-HHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESS--CTTCCEEEEEHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEec--CCCceeeeeeHHHHHHHH
Confidence            4 56777776654 468999999997 443221100      0          0111111  112234789999999999


Q ss_pred             HHHhcCcccc--cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          214 ADVFSNTAVA--ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       214 ~~al~~~~~~--~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +.++.++...  .+++||+++ .   ..++.|++..+.+..+
T Consensus       224 ~~~~~~~~~~~~~~~~~ni~~-~---~~s~~e~~~~i~~~~~  261 (312)
T 2yy7_A          224 INIMKAPVEKIKIHSSYNLAA-M---SFTPTEIANEIKKHIP  261 (312)
T ss_dssp             HHHHHSCGGGCCCSSCEECCS-E---EECHHHHHHHHHTTCT
T ss_pred             HHHHhCcccccccCceEEeCC-C---ccCHHHHHHHHHHHCC
Confidence            9999765322  248999986 4   5788889988887655

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.91  E-value=1.4e-23  Score=211.77  Aligned_cols=238  Identities=13%  Similarity=0.092  Sum_probs=158.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHH-------------HHHHhhhhhhhhhhhccceEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQEL-------------ARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l-------------~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      .+++|||||||||||++|++.|+++|++|++++|........             ......   +......++.++.+|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR---WKALTGKSIELYVGDI   86 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHH---HHHHHCCCCEEEESCT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhh---HhhccCCceEEEECCC
Confidence            568999999999999999999999999999999875321100             000000   0001124677999999


Q ss_pred             CCHHHHHHHhcC--cCEEEEccCCCCC-----CC-----CccccHHHHHHHHHHHHHcCC-CeEEEEecccccccccCCC
Q 044905           70 DSAESIAKAIGN--AGKVVVTIGPTED-----GP-----TSEVSTSDAFQVIQAAQLAGV-GHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        70 ~D~~sl~~al~g--~d~Vi~~ag~~~~-----~~-----~~~vn~~~~~~ll~Aa~~~gV-k~~V~vSSs~v~~~~~~~~  136 (427)
                      +|.+++.+++++  +|+|||+||....     ++     .+++|+.++.+++++|...++ ++|||+||.++|+....+.
T Consensus        87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~  166 (404)
T 1i24_A           87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDI  166 (404)
T ss_dssp             TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCB
T ss_pred             CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCC
Confidence            999999999987  9999999997542     11     347899999999999999998 5999999998876443211


Q ss_pred             CCC--------------CCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC----------------
Q 044905          137 LDG--------------ISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE----------------  184 (427)
Q Consensus       137 ~~~--------------~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~----------------  184 (427)
                      .+.              .+....+.|+.++ ...|.++..+. +.|++++++||| +++....+                
T Consensus       167 ~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK-~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~  245 (404)
T 1i24_A          167 EEGYITITHNGRTDTLPYPKQASSFYHLSK-VHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAV  245 (404)
T ss_dssp             CSSEEEEEETTEEEEEECCCCCCSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTT
T ss_pred             CccccccccccccccccCCCCCCChhHHHH-HHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccc
Confidence            111              1111224455554 45677776654 459999999997 33332110                


Q ss_pred             --C-c----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccC--cEEEEecCCCCChhhHHHHHHHHH
Q 044905          185 --S-S----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN--KVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       185 --~-~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g--~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                        . .          ..+.+.+.+.  ...++||++|+|++++.++.++. ..+  ++||+++ .   ..++.|++..+.
T Consensus       246 ~~~~~~~~~~~~~~g~~~~~~g~g~--~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~-~---~~s~~e~~~~i~  318 (404)
T 1i24_A          246 FGTALNRFCVQAAVGHPLTVYGKGG--QTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT-E---QFSVNELASLVT  318 (404)
T ss_dssp             TCCHHHHHHHHHHHTCCEEEETTSC--CEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS-E---EEEHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHcCCeeEEeCCCC--ceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC-C---CCcHHHHHHHHH
Confidence              0 0          0111212211  12368999999999999997642 235  7999988 5   567777777775


Q ss_pred             hc
Q 044905          250 ED  251 (427)
Q Consensus       250 ~~  251 (427)
                      +.
T Consensus       319 ~~  320 (404)
T 1i24_A          319 KA  320 (404)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=1.4e-24  Score=218.40  Aligned_cols=232  Identities=13%  Similarity=0.086  Sum_probs=157.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      .+|+|||||||||||++|++.|+++| ++|++++|+..... .+.            ...+++++.+|++|.+++.++++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------------~~~~v~~~~~Dl~d~~~l~~~~~   98 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------------DHPAVRFSETSITDDALLASLQD   98 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------------CCTTEEEECSCTTCHHHHHHCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------------CCCceEEEECCCCCHHHHHHHhh
Confidence            45789999999999999999999999 99999999865321 110            02356789999999999999999


Q ss_pred             CcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccCCCCC---CC---Cc-cch
Q 044905           81 NAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTYNVLD---GI---SS-FFN  145 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~~~~~---~~---~~-~~~  145 (427)
                      ++|+|||+++.....       ..+++|+.++.+++++|++. ++++|||+||.++|+........   ..   +. ...
T Consensus        99 ~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~  178 (377)
T 2q1s_A           99 EYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND  178 (377)
T ss_dssp             CCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCC
T ss_pred             CCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCC
Confidence            999999999976421       14567888999999999999 99999999999887653321111   11   11 122


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCC---------C-----CC-ccceE---Eecc-----cccCCC
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFS---------P-----ES-SYNVV---VSAE-----ASVDAN  200 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~---------~-----~~-~~~i~---~~~~-----~~~~~~  200 (427)
                      +.|+..+ ...|.++..+. +.|+++++|||| +++...         .     .. ...+.   ..+.     +.....
T Consensus       179 ~~Y~~sK-~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~  257 (377)
T 2q1s_A          179 SPYSMSK-IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVAT  257 (377)
T ss_dssp             SHHHHHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCE
T ss_pred             CchHHHH-HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeE
Confidence            3455544 56787776654 469999999997 343322         1     00 00000   0010     111122


Q ss_pred             CCcccHHHHHHH-HHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          201 DYKVAKSQIASL-VADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       201 ~~~i~v~DVA~~-v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      .++|+++|+|++ ++.++.++.  .| +||++++.   ..++.|++..+.+..+
T Consensus       258 ~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~---~~s~~e~~~~i~~~~g  305 (377)
T 2q1s_A          258 RDFIFVEDVANGLIACAADGTP--GG-VYNIASGK---ETSIADLATKINEITG  305 (377)
T ss_dssp             ECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCC---CEEHHHHHHHHHHHHT
T ss_pred             EeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCC---ceeHHHHHHHHHHHhC
Confidence            368999999999 999988643  45 99999987   5667777777765433

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.91  E-value=4.5e-24  Score=205.30  Aligned_cols=207  Identities=19%  Similarity=0.261  Sum_probs=147.5

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            6 TVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +|+|||||||+|++|++.|+++  |++|++++|++++...+...             ++.++.+|++|++++.++++++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQ-------------GITVRQADYGDEAALTSALQGVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHT-------------TCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcC-------------CCeEEEcCCCCHHHHHHHHhCCC
Confidence            5899999999999999999999  99999999998765554332             34589999999999999999999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV  163 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l  163 (427)
                      +|||+++...     ..++.++.+++++|+++|+++||++||.+++.       .+ .     .|+..+ ...|.++.  
T Consensus        68 ~vi~~a~~~~-----~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------~~-~-----~y~~sK-~~~e~~~~--  126 (286)
T 2zcu_A           68 KLLLISSSEV-----GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT-------SP-L-----GLADEH-IETEKMLA--  126 (286)
T ss_dssp             EEEECC-------------CHHHHHHHHHHHHTCCEEEEEEETTTTT-------CC-S-----TTHHHH-HHHHHHHH--
T ss_pred             EEEEeCCCCc-----hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------Cc-c-----hhHHHH-HHHHHHHH--
Confidence            9999998632     23556899999999999999999999887641       01 1     223222 34565554  


Q ss_pred             hcCCCeEEEEeCCCCCCCCCCCc-----cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCCh
Q 044905          164 IETDVSYTFIKTSLTEDFSPESS-----YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPA  238 (427)
Q Consensus       164 ~~~gl~~tilRPG~~~~~~~~~~-----~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~  238 (427)
                       +.|++++++|||++.+......     .+....+.  .....++++++|+|++++.++.++ ...+++|+++++.   .
T Consensus       127 -~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~Dva~~~~~~~~~~-~~~g~~~~i~~~~---~  199 (286)
T 2zcu_A          127 -DSGIVYTLLRNGWYSENYLASAPAALEHGVFIGAA--GDGKIASATRADYAAAAARVISEA-GHEGKVYELAGDS---A  199 (286)
T ss_dssp             -HHCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESC--TTCCBCCBCHHHHHHHHHHHHHSS-SCTTCEEEECCSS---C
T ss_pred             -HcCCCeEEEeChHHhhhhHHHhHHhhcCCceeccC--CCCccccccHHHHHHHHHHHhcCC-CCCCceEEEeCCC---c
Confidence             4799999999984432111110     11111111  122346999999999999999864 3468999999987   4


Q ss_pred             hhHHHHHHHHHhccc
Q 044905          239 RRVDELFSAIAEDGR  253 (427)
Q Consensus       239 ~s~~ell~~i~~~~~  253 (427)
                      .++.|++..+.+..+
T Consensus       200 ~s~~e~~~~i~~~~g  214 (286)
T 2zcu_A          200 WTLTQLAAELTKQSG  214 (286)
T ss_dssp             BCHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHC
Confidence            667777777766544

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=3.6e-24  Score=209.05  Aligned_cols=225  Identities=14%  Similarity=0.135  Sum_probs=156.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      |+|||||||||||++|++.|+++|++|++++|.... ...+              ..++.++.+|++|.+++.++++  +
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~~~   66 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV--------------PKGVPFFRVDLRDKEGVERAFREFR   66 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS--------------CTTCCEECCCTTCHHHHHHHHHHHC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc--------------ccCeEEEECCCCCHHHHHHHHHhcC
Confidence            589999999999999999999999999999985432 1111              1234589999999999999998  8


Q ss_pred             cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecc-ccccc-ccC-CCCCCCCccchhhhhcc
Q 044905           82 AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG-NTTAA-STY-NVLDGISSFFNNLFSRN  151 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs-~v~~~-~~~-~~~~~~~~~~~~~~~k~  151 (427)
                      +|+|||+++....     +  ..+++|+.++.+++++|++.++++||++||. ++|+. ... +..+..+....+.|+.+
T Consensus        67 ~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~s  146 (311)
T 2p5y_A           67 PTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAAS  146 (311)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHH
T ss_pred             CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHH
Confidence            9999999987542     1  1457888899999999999999999999998 66543 111 11111111122345555


Q ss_pred             ccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----c-----------cceEEe-----cccccCCCCCcccHHHH
Q 044905          152 QPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----S-----------YNVVVS-----AEASVDANDYKVAKSQI  209 (427)
Q Consensus       152 ~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----~-----------~~i~~~-----~~~~~~~~~~~i~v~DV  209 (427)
                      + ...|.++..+. +.|++++++||+ +++......    .           ..+...     +.+.  ...+++|++|+
T Consensus       147 K-~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~i~v~Dv  223 (311)
T 2p5y_A          147 K-AAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEG--CVRDYVYVGDV  223 (311)
T ss_dssp             H-HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCC--CEECEEEHHHH
T ss_pred             H-HHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCC--eEEeeEEHHHH
Confidence            4 55777776654 568999999997 333221100    0           011111     1111  11268999999


Q ss_pred             HHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          210 ASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       210 A~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      |++++.++.++    +++||++++.   ..++.|++..+.+..+
T Consensus       224 a~a~~~~~~~~----~~~~~i~~~~---~~s~~e~~~~i~~~~g  260 (311)
T 2p5y_A          224 AEAHALALFSL----EGIYNVGTGE---GHTTREVLMAVAEAAG  260 (311)
T ss_dssp             HHHHHHHHHHC----CEEEEESCSC---CEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhCC----CCEEEeCCCC---CccHHHHHHHHHHHhC
Confidence            99999988642    7899999987   5666777777665433

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.91  E-value=9.3e-24  Score=206.63  Aligned_cols=219  Identities=14%  Similarity=0.049  Sum_probs=156.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |.+|+|||||||||||++|++.|+++|++|++++|+.                           .+|+.|.+++.++++ 
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~d~~~~~~~~~~   53 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFAS   53 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCccCHHHHHHHHHh
Confidence            5567999999999999999999999999999988762                           158999999999999 


Q ss_pred             -CcCEEEEccCCCCC------C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC-----Cccc-h
Q 044905           81 -NAGKVVVTIGPTED------G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI-----SSFF-N  145 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~------~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~-----~~~~-~  145 (427)
                       ++|+|||+++....      +  ..+++|+.++.+++++|.+.++++|||+||.++|+........+.     +... .
T Consensus        54 ~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  133 (321)
T 1e6u_A           54 ERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTN  133 (321)
T ss_dssp             HCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGG
T ss_pred             cCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCC
Confidence             99999999997641      1  145678899999999999999999999999998765332221111     1111 2


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-----C-c---------------cceEEecccccCCCCC
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-----S-S---------------YNVVVSAEASVDANDY  202 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-----~-~---------------~~i~~~~~~~~~~~~~  202 (427)
                      +.|+..+ +..|.++..+. +.+++++++||+ +++.....     . .               ..+.+.+.+.  ...+
T Consensus       134 ~~Y~~sK-~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~--~~~~  210 (321)
T 1e6u_A          134 EPYAIAK-IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT--PMRE  210 (321)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC--CEEC
T ss_pred             CccHHHH-HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCC--EEEE
Confidence            3555554 56777776655 458999999997 33332210     0 0               1122222211  2236


Q ss_pred             cccHHHHHHHHHHHhcCcccc-------cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          203 KVAKSQIASLVADVFSNTAVA-------ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~~-------~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +||++|+|++++.++.++...       .+++||++++.   ..++.|++..+.+..+
T Consensus       211 ~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~---~~s~~e~~~~i~~~~g  265 (321)
T 1e6u_A          211 FLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV---DCTIRELAQTIAKVVG  265 (321)
T ss_dssp             EEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSC---CEEHHHHHHHHHHHHT
T ss_pred             eEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCC---CccHHHHHHHHHHHhC
Confidence            999999999999999865321       26899999887   5667777777765433

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=2.5e-23  Score=209.76  Aligned_cols=243  Identities=11%  Similarity=0.050  Sum_probs=162.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEecCcch---------HHHHHHHHhhhhhhhhh-hhcc---ceEEEecC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLL-REGFSVRAGVPELGA---------AQELARLAASYKILSKE-ELKR---LNAVESNF   69 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL-~~G~~V~al~R~~~~---------~~~l~~~~~~~~~~~~~-~~~r---l~vv~gDl   69 (427)
                      .|+|||||||||||++|++.|+ ++|++|++++|+...         ...+......   +... ...+   +.++.+|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Dl   78 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQ---SDGPKPPWADRYAALEVGDV   78 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHH---SCSSCCTTTTCCCEEEESCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHH---hhccccccCCceEEEEECCC
Confidence            3699999999999999999999 999999999997653         2333211000   0000 0013   67999999


Q ss_pred             CCHHHHHHHhc--C-cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEeccccccccc------
Q 044905           70 DSAESIAKAIG--N-AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAAST------  133 (427)
Q Consensus        70 ~D~~sl~~al~--g-~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~------  133 (427)
                      +|.+++.++++  + +|+|||+++.....       ..+++|+.++.+++++|++.++++|||+||.++|+...      
T Consensus        79 ~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~  158 (397)
T 1gy8_A           79 RNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVST  158 (397)
T ss_dssp             TCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----
T ss_pred             CCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccc
Confidence            99999999997  6 99999999976421       15678899999999999999999999999998875433      


Q ss_pred             -CCC-CCCCCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCC----------CCCcc------------
Q 044905          134 -YNV-LDGISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFS----------PESSY------------  187 (427)
Q Consensus       134 -~~~-~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~----------~~~~~------------  187 (427)
                       ..+ .+..+....+.|+.++ +..|.++..+. +.|++++++||+ +++...          .....            
T Consensus       159 ~~~~~~E~~~~~p~~~Y~~sK-~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  237 (397)
T 1gy8_A          159 NAEPIDINAKKSPESPYGESK-LIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIA  237 (397)
T ss_dssp             CCCCBCTTSCCBCSSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHS
T ss_pred             cccCcCccCCCCCCCchHHHH-HHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHH
Confidence             111 1111112224555554 56787777665 459999999997 332211          00000            


Q ss_pred             ---------------ceEEeccc----ccCCCCCcccHHHHHHHHHHHhcCccccc----C---cEEEEecCCCCChhhH
Q 044905          188 ---------------NVVVSAEA----SVDANDYKVAKSQIASLVADVFSNTAVAE----N---KVVKVFTDPSAPARRV  241 (427)
Q Consensus       188 ---------------~i~~~~~~----~~~~~~~~i~v~DVA~~v~~al~~~~~~~----g---~~~nI~~~~~~~~~s~  241 (427)
                                     .+.+.+..    ......++||++|+|++++.++.++....    +   ++||++++.   ..++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~---~~s~  314 (397)
T 1gy8_A          238 PDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR---GYSV  314 (397)
T ss_dssp             CC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC---CEEH
T ss_pred             hcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCC---cccH
Confidence                           01111100    11112368999999999999886432211    3   899999887   5667


Q ss_pred             HHHHHHHHhccc
Q 044905          242 DELFSAIAEDGR  253 (427)
Q Consensus       242 ~ell~~i~~~~~  253 (427)
                      .|++..+.+..+
T Consensus       315 ~e~~~~i~~~~g  326 (397)
T 1gy8_A          315 REVIEVARKTTG  326 (397)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhC
Confidence            777777765433

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.90  E-value=1.1e-23  Score=205.46  Aligned_cols=222  Identities=8%  Similarity=0.027  Sum_probs=154.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++++|||||||||||++|++.|+++|++|++++|+..    ....+...         ....+++++.+|+.        
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~~Dl~--------   68 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKF---------LEKPVLELEERDLS--------   68 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEE---------ECSCGGGCCHHHHT--------
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhh---------ccCCCeeEEeCccc--------
Confidence            4689999999999999999999999999999999875    11111000         01123456666665        


Q ss_pred             hcCcCEEEEccCCCCC-------CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC-CCCccchhhhhc
Q 044905           79 IGNAGKVVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD-GISSFFNNLFSR  150 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~-~~~~~~~~~~~k  150 (427)
                        ++|+|||+++....       ..... |+.++.+++++|+++|+++|||+||.++|+.....+.. ..+....+.|+.
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~  145 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAA  145 (321)
T ss_dssp             --TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             --cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHH
Confidence              89999999986542       12455 99999999999999999999999999987665432222 222222345655


Q ss_pred             cccccHHHHHHHHh-cCCC-eEEEEeCC-CCCCCCCCC--c----------cceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          151 NQPLTVPEFLQKVI-ETDV-SYTFIKTS-LTEDFSPES--S----------YNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       151 ~~~l~~E~~l~~l~-~~gl-~~tilRPG-~~~~~~~~~--~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .+ +..|.++..+. +.++ +++++||+ +++......  .          ..+...+.+.  ...+++|++|+|++++.
T Consensus       146 sK-~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~~~~~  222 (321)
T 3vps_A          146 SK-VGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGE--QRRDFTYITDVVDKLVA  222 (321)
T ss_dssp             HH-HHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSC--CEECEEEHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCC--ceEceEEHHHHHHHHHH
Confidence            54 56788887766 5789 99999997 444322210  0          0122222222  22369999999999999


Q ss_pred             HhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          216 VFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       216 al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++.++.  .| +||++++.   ..++.|++..+. ..+.
T Consensus       223 ~~~~~~--~g-~~~i~~~~---~~s~~e~~~~i~-~~g~  254 (321)
T 3vps_A          223 LANRPL--PS-VVNFGSGQ---SLSVNDVIRILQ-ATSP  254 (321)
T ss_dssp             GGGSCC--CS-EEEESCSC---CEEHHHHHHHHH-TTCT
T ss_pred             HHhcCC--CC-eEEecCCC---cccHHHHHHHHH-HhCC
Confidence            998653  36 99999987   577888888887 6553

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=1.5e-23  Score=208.46  Aligned_cols=232  Identities=9%  Similarity=0.072  Sum_probs=161.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |+|||||||||||++|++.|+++ |++|++++|+..  ....+...         ....++.++.+|++|.+++.++++ 
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~   71 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI---------SESNRYNFEHADICDSAEITRIFEQ   71 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT---------TTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhh---------hcCCCeEEEECCCCCHHHHHHHHhh
Confidence            57999999999999999999998 799999999752  22222100         012356789999999999999998 


Q ss_pred             -CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHc--CCC-------eEEEEecccccccccC---------
Q 044905           81 -NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLA--GVG-------HVAIIYDGNTTAASTY---------  134 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~--gVk-------~~V~vSSs~v~~~~~~---------  134 (427)
                       ++|+|||++|....     ++  .+++|+.++.+++++|...  +++       +|||+||.++|+....         
T Consensus        72 ~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  151 (361)
T 1kew_A           72 YQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             HCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             cCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccccc
Confidence             99999999997642     11  5678889999999999998  887       9999999988654321         


Q ss_pred             --CCCCCCCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-----------cceEEecccccC
Q 044905          135 --NVLDGISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-----------YNVVVSAEASVD  198 (427)
Q Consensus       135 --~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-----------~~i~~~~~~~~~  198 (427)
                        ...+..+....+.|+.++ ...|.++..+. +.|++++++||+ +++..... ..           ..+...+.+.  
T Consensus       152 ~~~~~E~~~~~~~~~Y~~sK-~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  228 (361)
T 1kew_A          152 LPLFTETTAYAPSSPYSASK-ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD--  228 (361)
T ss_dssp             CCCBCTTSCCCCCSHHHHHH-HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC--
T ss_pred             CCCCCCCCCCCCCCccHHHH-HHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCc--
Confidence              111111112234555554 56787777665 458999999997 33332211 00           0111111111  


Q ss_pred             CCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          199 ANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       199 ~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ...+++|++|+|++++.++.+.  ..|++||++++.   ..++.|++..+.+..+
T Consensus       229 ~~~~~i~v~Dva~a~~~~~~~~--~~g~~~~v~~~~---~~s~~e~~~~i~~~~g  278 (361)
T 1kew_A          229 QIRDWLYVEDHARALHMVVTEG--KAGETYNIGGHN---EKKNLDVVFTICDLLD  278 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHC--CTTCEEEECCCC---EEEHHHHHHHHHHHHH
T ss_pred             eeEeeEEHHHHHHHHHHHHhCC--CCCCEEEecCCC---eeeHHHHHHHHHHHhC
Confidence            1126899999999999988743  368899999987   5667777777655433

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.90  E-value=2.3e-23  Score=203.06  Aligned_cols=222  Identities=12%  Similarity=0.157  Sum_probs=149.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +|+|+||||||++|++|++.|+++|++|++++|+.+     +...+...          ...+++++.+|++|++++.++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~----------~~~~~~~~~~D~~d~~~l~~~   73 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF----------KQLGAKLIEASLDDHQRLVDA   73 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH----------HTTTCEEECCCSSCHHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH----------HhCCeEEEeCCCCCHHHHHHH
Confidence            678999999999999999999999999999999854     22222111          123456899999999999999


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhccccccHH
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVP  157 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E  157 (427)
                      ++++|+|||+++....    ..++.++.+++++|+++| ++|||+ |+.   +........+..+ ....| ..+ ...|
T Consensus        74 ~~~~d~vi~~a~~~~~----~~~~~~~~~l~~aa~~~g~v~~~v~-S~~---g~~~~~~~~~~~p-~~~~y-~sK-~~~e  142 (313)
T 1qyd_A           74 LKQVDVVISALAGGVL----SHHILEQLKLVEAIKEAGNIKRFLP-SEF---GMDPDIMEHALQP-GSITF-IDK-RKVR  142 (313)
T ss_dssp             HTTCSEEEECCCCSSS----STTTTTHHHHHHHHHHSCCCSEEEC-SCC---SSCTTSCCCCCSS-TTHHH-HHH-HHHH
T ss_pred             HhCCCEEEECCccccc----hhhHHHHHHHHHHHHhcCCCceEEe-cCC---cCCccccccCCCC-CcchH-HHH-HHHH
Confidence            9999999999987532    224457899999999999 999984 322   2111111111111 12233 322 3355


Q ss_pred             HHHHHHhcCCCeEEEEeCC-CCCCCCCCCc----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCc
Q 044905          158 EFLQKVIETDVSYTFIKTS-LTEDFSPESS----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENK  226 (427)
Q Consensus       158 ~~l~~l~~~gl~~tilRPG-~~~~~~~~~~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~  226 (427)
                      +++   .+.|++|+++||| +++++.+...          ..+...+  ......++++++|+|++++.++.++ ...++
T Consensus       143 ~~~---~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~i~~~Dva~~~~~~l~~~-~~~~~  216 (313)
T 1qyd_A          143 RAI---EAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYG--DGNVKGIWVDEDDVGTYTIKSIDDP-QTLNK  216 (313)
T ss_dssp             HHH---HHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBT--TSCSEEEEECHHHHHHHHHHHTTCG-GGSSS
T ss_pred             HHH---HhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeC--CCCceEEEEEHHHHHHHHHHHHhCc-ccCCc
Confidence            444   4589999999997 3332211100          0111111  1122346899999999999999865 34578


Q ss_pred             EEEEecC-CCCChhhHHHHHHHHHhccchh
Q 044905          227 VVKVFTD-PSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       227 ~~nI~~~-~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      .|++.++ +   ..++.|++..+.+..++.
T Consensus       217 ~~~~~g~~~---~~s~~e~~~~~~~~~g~~  243 (313)
T 1qyd_A          217 TMYIRPPMN---ILSQKEVIQIWERLSEQN  243 (313)
T ss_dssp             EEECCCGGG---EEEHHHHHHHHHHHHTCC
T ss_pred             eEEEeCCCC---ccCHHHHHHHHHHhcCCC
Confidence            8888754 4   577888888887765543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=1.9e-23  Score=202.98  Aligned_cols=223  Identities=10%  Similarity=0.096  Sum_probs=154.1

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      +|||||||||||++|++.|+++| ++|++++|+....  ..+               .++. +.+|++|.+.+..++++ 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~---------------~~~~-~~~d~~~~~~~~~~~~~~   64 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL---------------VDLN-IADYMDKEDFLIQIMAGE   64 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHH---------------HTSC-CSEEEEHHHHHHHHHTTC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhc---------------Ccce-eccccccHHHHHHHHhcc
Confidence            58999999999999999999999 9999999987642  111               1123 67899999999999985 


Q ss_pred             ----cCEEEEccCCCCCC---C--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCccchhhhhcc
Q 044905           82 ----AGKVVVTIGPTEDG---P--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISSFFNNLFSRN  151 (427)
Q Consensus        82 ----~d~Vi~~ag~~~~~---~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~~~~~~~~k~  151 (427)
                          +|+|||+++.....   +  .+++|+.++.+++++|...|+ +|||+||.++|+.....+..+ .+....+.|+..
T Consensus        65 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~s  143 (310)
T 1eq2_A           65 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYS  143 (310)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHH
T ss_pred             ccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHH
Confidence                99999999976431   1  457899999999999999999 999999998876543212111 111122345555


Q ss_pred             ccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC------CCcc----------ceEEecccccCC-CCCcccHHHHHHH
Q 044905          152 QPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP------ESSY----------NVVVSAEASVDA-NDYKVAKSQIASL  212 (427)
Q Consensus       152 ~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~------~~~~----------~i~~~~~~~~~~-~~~~i~v~DVA~~  212 (427)
                      + ...|.++..+. +.|++++++||| +++....      ....          .+...+.  ... ..+++|++|+|++
T Consensus       144 K-~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~i~v~Dva~~  220 (310)
T 1eq2_A          144 K-FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEG--SENFKRDFVYVGDVADV  220 (310)
T ss_dssp             H-HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC---------------CBCEEEHHHHHHH
T ss_pred             H-HHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecC--CCcceEccEEHHHHHHH
Confidence            4 56788887765 568999999997 4443221      0000          0111111  112 3369999999999


Q ss_pred             HHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          213 VADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++.++.++.   +++||++++.   ..++.|++..+.+..+.
T Consensus       221 ~~~~~~~~~---~~~~~i~~~~---~~s~~e~~~~i~~~~g~  256 (310)
T 1eq2_A          221 NLWFLENGV---SGIFNLGTGR---AESFQAVADATLAYHKK  256 (310)
T ss_dssp             HHHHHHHCC---CEEEEESCSC---CBCHHHHHHHC------
T ss_pred             HHHHHhcCC---CCeEEEeCCC---ccCHHHHHHHHHHHcCC
Confidence            999987542   8899999887   56778888877665544

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.90  E-value=2.5e-23  Score=193.51  Aligned_cols=204  Identities=13%  Similarity=0.144  Sum_probs=142.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLL-REGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL-~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +|++|+||||||+||++|++.|+ ++|++|++++|+++ ++..+...           ..++.++.+|++|.+++.++++
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~   72 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIID-----------HERVTVIEGSFQNPGXLEQAVT   72 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHT-----------STTEEEEECCTTCHHHHHHHHT
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccC-----------CCceEEEECCCCCHHHHHHHHc
Confidence            34559999999999999999999 89999999999987 55544211           2355689999999999999999


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHH
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL  160 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l  160 (427)
                      ++|+|||++|..        |+. +.+++++|++.|+++||++||.+++................+.|...+ ...|.  
T Consensus        73 ~~d~vv~~ag~~--------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K-~~~e~--  140 (221)
T 3r6d_A           73 NAEVVFVGAMES--------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGE-RQARN--  140 (221)
T ss_dssp             TCSEEEESCCCC--------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHH-HHHHH--
T ss_pred             CCCEEEEcCCCC--------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHH-HHHHH--
Confidence            999999999853        333 899999999999999999999886543211000000000000333332 23443  


Q ss_pred             HHHhcCCCeEEEEeCCCC-CCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHh--cCcccccCcEEEEecCC
Q 044905          161 QKVIETDVSYTFIKTSLT-EDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVF--SNTAVAENKVVKVFTDP  234 (427)
Q Consensus       161 ~~l~~~gl~~tilRPG~~-~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al--~~~~~~~g~~~nI~~~~  234 (427)
                       .+...+++|++||||++ ++...   ..+.......... ..+++.+|||++++.++  +++..+.++.+.+.++.
T Consensus       141 -~~~~~~i~~~~vrpg~v~~~~~~---~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          141 -VLRESNLNYTILRLTWLYNDPEX---TDYELIPEGAQFN-DAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             -HHHHSCSEEEEEEECEEECCTTC---CCCEEECTTSCCC-CCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             -HHHhCCCCEEEEechhhcCCCCC---cceeeccCCccCC-CceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence             34468999999999943 33111   1222222121211 14899999999999999  87766789999998764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=2.8e-23  Score=212.30  Aligned_cols=240  Identities=11%  Similarity=0.132  Sum_probs=162.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH---HHHHHHHhhhh--hhhhhhhccceEEEecCCCHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA---QELARLAASYK--ILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~---~~l~~~~~~~~--~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      +.+++|||||||||||++|++.|+++|++|++++|+....   ..+......+.  .+......++.++.+|++|.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            4567899999999999999999999999999999998732   22222111110  001112367889999999988888


Q ss_pred             HHhcCcCEEEEccCCCCC----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC------CCCCCCC---cc
Q 044905           77 KAIGNAGKVVVTIGPTED----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY------NVLDGIS---SF  143 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~------~~~~~~~---~~  143 (427)
                       .+.++|+|||+++....    ....++|+.++.+++++|.. ++++|||+||.++ +....      ...+..+   ..
T Consensus       147 -~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~  223 (427)
T 4f6c_A          147 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL  223 (427)
T ss_dssp             -CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred             -CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence             78899999999997542    22567899999999999999 8899999999887 22100      0001111   11


Q ss_pred             chhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC---------ccce--------EEecccccCCCCCccc
Q 044905          144 FNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPES---------SYNV--------VVSAEASVDANDYKVA  205 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~---------~~~i--------~~~~~~~~~~~~~~i~  205 (427)
                      ..+.|+.++ ..+|.++..+.+.|++++++||| +++......         ...+        .+.. .......++++
T Consensus       224 ~~~~Y~~sK-~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~  301 (427)
T 4f6c_A          224 LTSPYTRSK-FYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSF  301 (427)
T ss_dssp             CCSHHHHHH-HHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEE
T ss_pred             CCCchHHHH-HHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEee
Confidence            234555554 56788888777789999999997 333322211         0000        0100 00122336999


Q ss_pred             HHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          206 KSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++|+|++++.++.++.  .+++||++++.   ..++.+++..+.+.
T Consensus       302 v~DvA~ai~~~~~~~~--~g~~~~l~~~~---~~s~~el~~~i~~~  342 (427)
T 4f6c_A          302 VDTTARQIVALAQVNT--PQIIYHVLSPN---KMPVKSLLECVKRK  342 (427)
T ss_dssp             HHHHHHHHHHHTTSCC--CCSEEEESCSC---CEEHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHcCCC--CCCEEEecCCC---CCcHHHHHHHHHHc
Confidence            9999999999998653  78999999987   67888888888763

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.90  E-value=4.1e-23  Score=214.75  Aligned_cols=249  Identities=14%  Similarity=0.124  Sum_probs=169.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC---CCeEEEEecCcchHHHHHHHHhhhh--------hhhhhhhccceEEEecCC-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE---GFSVRAGVPELGAAQELARLAASYK--------ILSKEELKRLNAVESNFD-   70 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~---G~~V~al~R~~~~~~~l~~~~~~~~--------~~~~~~~~rl~vv~gDl~-   70 (427)
                      .+|+|||||||||||++|+++|+++   |++|++++|+.+....+......+.        .+......++.++.+|++ 
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~  151 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE  151 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence            5789999999999999999999999   9999999999875433322111100        011112367889999998 


Q ss_pred             -----CHHHHHHHhcCcCEEEEccCCCCCC---CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           71 -----SAESIAKAIGNAGKVVVTIGPTEDG---PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        71 -----D~~sl~~al~g~d~Vi~~ag~~~~~---~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           |.+.+..+++++|+|||+++.....   ..+.+|+.++.+++++|...++++|||+||.++|+........+...
T Consensus       152 ~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~  231 (478)
T 4dqv_A          152 PDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDAD  231 (478)
T ss_dssp             GGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSC
T ss_pred             cccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCccc
Confidence                 7789999999999999999975432   25678999999999999999999999999998866533222111111


Q ss_pred             c------------chhhhhccccccHHHHHHHHhc-CCCeEEEEeCC-CCCCCC-C------CCccceE--------Eec
Q 044905          143 F------------FNNLFSRNQPLTVPEFLQKVIE-TDVSYTFIKTS-LTEDFS-P------ESSYNVV--------VSA  193 (427)
Q Consensus       143 ~------------~~~~~~k~~~l~~E~~l~~l~~-~gl~~tilRPG-~~~~~~-~------~~~~~i~--------~~~  193 (427)
                      .            ..+.|+.+| +..|.++..+.. .|++++++||| ++++.. .      .+...+.        ...
T Consensus       232 ~~p~~~~~~~~~~~~~~Y~~sK-~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P~  310 (478)
T 4dqv_A          232 IRVISPTRTVDGGWAGGYGTSK-WAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAPR  310 (478)
T ss_dssp             HHHHCCEEECCTTSEECHHHHH-HHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEES
T ss_pred             ccccCcccccccccccchHHHH-HHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCcccc
Confidence            0            012365555 567888877653 69999999998 333211 0      0000000        000


Q ss_pred             ----c---cc-cCCCCCcccHHHHHHHHHHHhcCc---ccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          194 ----E---AS-VDANDYKVAKSQIASLVADVFSNT---AVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       194 ----~---~~-~~~~~~~i~v~DVA~~v~~al~~~---~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                          .   +. .....+++|++|+|++++.++.+.   +...+++||++++... ..++.|++..+.+.+.
T Consensus       311 ~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~-~~s~~el~~~l~~~g~  380 (478)
T 4dqv_A          311 SFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDD-GIGLDEYVDWLIEAGY  380 (478)
T ss_dssp             CSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCS-SCSHHHHHHHHHHTTC
T ss_pred             cccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCC-CcCHHHHHHHHHHcCC
Confidence                0   00 022347899999999999887641   2346799999998731 1667777777776543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=6.1e-23  Score=202.15  Aligned_cols=235  Identities=11%  Similarity=0.033  Sum_probs=161.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |..|+|||||||||||++|++.|+++|++|++++|+....  ..+....         ...+++++.+|++|.+++.+++
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~   71 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG---------IENDVKIIHMDLLEFSNIIRTI   71 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT---------CTTTEEECCCCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc---------ccCceeEEECCCCCHHHHHHHH
Confidence            4568999999999999999999999999999999987643  1222111         0134568899999999999999


Q ss_pred             cC--cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCC-CeEEEEecccccccccCCCCCC-CCccchhhh
Q 044905           80 GN--AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGV-GHVAIIYDGNTTAASTYNVLDG-ISSFFNNLF  148 (427)
Q Consensus        80 ~g--~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gV-k~~V~vSSs~v~~~~~~~~~~~-~~~~~~~~~  148 (427)
                      ++  +|+|||++|....     +  ..+++|+.++.+++++|.+.++ ++||++||.++|+.....+..+ .+....+.|
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y  151 (345)
T 2z1m_A           72 EKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPY  151 (345)
T ss_dssp             HHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             HhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChh
Confidence            86  5999999997532     1  1457888999999999999997 8999999998876543222111 111222455


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc---------------cceEEecccccCCCCCcccHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS---------------YNVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~---------------~~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      +.++ ...|.++..+. +.+++++++|+. .+...... ..               ......+.+.  ...+++|++|+|
T Consensus       152 ~~sK-~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~Dva  228 (345)
T 2z1m_A          152 AVAK-LFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLN--AKRDWGYAPEYV  228 (345)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTT--CEECCEEHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCC--ceeeeEEHHHHH
Confidence            5554 56777777665 458999988863 22211000 00               0011111111  122589999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++++.++.++   .+++||++++.   ..++.|++..+.+..+.
T Consensus       229 ~a~~~~~~~~---~~~~~~i~~~~---~~s~~e~~~~i~~~~g~  266 (345)
T 2z1m_A          229 EAMWLMMQQP---EPDDYVIATGE---THTVREFVEKAAKIAGF  266 (345)
T ss_dssp             HHHHHHHTSS---SCCCEEECCSC---CEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhCC---CCceEEEeCCC---CccHHHHHHHHHHHhCC
Confidence            9999999754   24799999987   56777888777765443

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.90  E-value=3.2e-23  Score=206.32  Aligned_cols=227  Identities=10%  Similarity=0.081  Sum_probs=157.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .|+|||||||||||++|++.|+++| ++|++++|+..... +..            ..++. +.+|++|.+.+..+++  
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~------------~~~~~-~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN------------LVDLN-IADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGG------------TTTSC-CSEEEEHHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhc------------ccCce-EeeecCcHHHHHHHHhhc
Confidence            4789999999999999999999999 99999999875421 100            11223 6789999999999987  


Q ss_pred             ---CcCEEEEccCCCCCC---C--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCccchhhhhcc
Q 044905           81 ---NAGKVVVTIGPTEDG---P--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISSFFNNLFSRN  151 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~---~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~~~~~~~~k~  151 (427)
                         ++|+|||+++.....   +  .+++|+.++.+++++|...++ +|||+||.++|+.....+.++ .+....+.|+..
T Consensus       112 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~s  190 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYS  190 (357)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHH
T ss_pred             ccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHH
Confidence               599999999976431   1  457899999999999999999 999999998875543212111 111122355555


Q ss_pred             ccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC------Cc----------cceEEecccccCCCCCcccHHHHHHHH
Q 044905          152 QPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE------SS----------YNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       152 ~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~------~~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      + ...|.++..+. +.|+++++|||+ +++.....      ..          ..+...+.+... ..++++++|+|+++
T Consensus       191 K-~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~ai  268 (357)
T 2x6t_A          191 K-FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENF-KRDFVYVGDVADVN  268 (357)
T ss_dssp             H-HHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGC-EECEEEHHHHHHHH
T ss_pred             H-HHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcc-eEccEEHHHHHHHH
Confidence            4 56788877765 568999999997 33332110      00          011111111110 22589999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +.++.++.   +++||++++.   ..++.|++..+.+..+
T Consensus       269 ~~~~~~~~---~~~~~i~~~~---~~s~~e~~~~i~~~~g  302 (357)
T 2x6t_A          269 LWFLENGV---SGIFNLGTGR---AESFQAVADATLAYHK  302 (357)
T ss_dssp             HHHHHHCC---CEEEEESCSC---CEEHHHHHHHHHHHHT
T ss_pred             HHHHhcCC---CCeEEecCCC---cccHHHHHHHHHHHcC
Confidence            99987542   8999999987   5667777777766544

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.89  E-value=3.2e-23  Score=216.79  Aligned_cols=240  Identities=11%  Similarity=0.127  Sum_probs=165.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH---HHHHHHhhhh--hhhhhhhccceEEEecCCCHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ---ELARLAASYK--ILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~---~l~~~~~~~~--~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      ++|+|||||||||||++|++.|+++|++|++++|+.....   .+......+.  ........++.++.+|+.|++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            4678999999999999999999999999999999987432   2221111110  001122468899999999988777 


Q ss_pred             HhcCcCEEEEccCCCCC----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC------CCCCCCC---ccc
Q 044905           78 AIGNAGKVVVTIGPTED----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY------NVLDGIS---SFF  144 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~------~~~~~~~---~~~  144 (427)
                      ++.++|+|||+++....    .....+|+.++.+++++|.. ++++|||+||.++ +....      +..+...   ...
T Consensus       228 ~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~~~~~~  305 (508)
T 4f6l_B          228 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLL  305 (508)
T ss_dssp             CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCT-TSEECTTCSCCEECTTCSCSSBCC
T ss_pred             CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhh-ccCCccCCcCcccccccccccccC
Confidence            77899999999997542    22567899999999999998 7899999999987 21100      0011111   112


Q ss_pred             hhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC---------ccce--------EEecccccCCCCCcccH
Q 044905          145 NNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPES---------SYNV--------VVSAEASVDANDYKVAK  206 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~---------~~~i--------~~~~~~~~~~~~~~i~v  206 (427)
                      .+.|+.++ +.+|.++..+.+.|++++++||| +++.....+         ...+        .+.. .......+++++
T Consensus       306 ~~~Y~~sK-~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v  383 (508)
T 4f6l_B          306 TSPYTRSK-FYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFV  383 (508)
T ss_dssp             CSHHHHHH-HHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEH
T ss_pred             CCcHHHHH-HHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcH
Confidence            34566555 56888888777789999999997 333322111         0000        0110 111223469999


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      +|+|++++.++.++.  .+++||++++.   ..++.+++..+.+..
T Consensus       384 ~DvA~ai~~~~~~~~--~~~~~nl~~~~---~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          384 DTTARQIVALAQVNT--PQIIYHVLSPN---KMPVKSLLECVKRKE  424 (508)
T ss_dssp             HHHHHHHHHHTTBCC--SCSEEEESCSC---EEEHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHhCCC--CCCEEEeCCCC---CCCHHHHHHHHHHcC
Confidence            999999999997653  78999999998   788888888887644

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.89  E-value=6.6e-23  Score=200.23  Aligned_cols=221  Identities=11%  Similarity=0.099  Sum_probs=133.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      +|+|||||||||||++|++.|+++|++|++++|+...     .   .             ++.+|++|.+++.+++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----~---~-------------~~~~Dl~d~~~~~~~~~~~~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----P---K-------------FEQVNLLDSNAVHHIIHDFQ   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CHHHHHHHC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----C---C-------------eEEecCCCHHHHHHHHHhhC
Confidence            4689999999999999999999999999999987543     0   0             577899999999999885  


Q ss_pred             cCEEEEccCCCCC-------CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccc
Q 044905           82 AGKVVVTIGPTED-------GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-------~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l  154 (427)
                      +|+|||++|....       ...+++|+.++.+++++|...++ +|||+||.++|++...+..+..+....+.|+..+ .
T Consensus        61 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK-~  138 (315)
T 2ydy_A           61 PHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTK-L  138 (315)
T ss_dssp             CSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHH-H
T ss_pred             CCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHH-H
Confidence            8999999986532       12567889999999999999987 9999999998765322222222222234555554 4


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCC---CCccceE---E-eccc---ccCCCCCcccHHHHHHHHHHHhcCc--c
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSP---ESSYNVV---V-SAEA---SVDANDYKVAKSQIASLVADVFSNT--A  221 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~---~~~~~i~---~-~~~~---~~~~~~~~i~v~DVA~~v~~al~~~--~  221 (427)
                      ..|.++..   .++++++|||+ +++....   .....+.   . .+..   ......++++++|+|++++.++.++  .
T Consensus       139 ~~e~~~~~---~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~  215 (315)
T 2ydy_A          139 DGEKAVLE---NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLD  215 (315)
T ss_dssp             HHHHHHHH---HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHH---hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccc
Confidence            56766655   36788999996 3332211   0000000   0 0100   0112236899999999999888642  1


Q ss_pred             cccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          222 VAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       222 ~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ...+++||++++.   ..++.|++..+.+..+
T Consensus       216 ~~~~~~~~i~~~~---~~s~~e~~~~i~~~~g  244 (315)
T 2ydy_A          216 PSIKGTFHWSGNE---QMTKYEMACAIADAFN  244 (315)
T ss_dssp             TTCCEEEECCCSC---CBCHHHHHHHHHHHTT
T ss_pred             cCCCCeEEEcCCC---cccHHHHHHHHHHHhC
Confidence            2368999999987   5667777777765444

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.89  E-value=3.3e-22  Score=197.22  Aligned_cols=235  Identities=13%  Similarity=0.109  Sum_probs=156.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch----HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA----AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~----~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+|||||||||||++|++.|+++|++|++++|....    ...+....          ..++.++.+|++|.+++.++++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~   70 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG----------GKHPTFVEGDIRNEALMTEILH   70 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH----------TSCCEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc----------CCcceEEEccCCCHHHHHHHhh
Confidence            589999999999999999999999999999875321    22221110          1245689999999999999887


Q ss_pred             --CcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCc-cchhhhh
Q 044905           81 --NAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISS-FFNNLFS  149 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~-~~~~~~~  149 (427)
                        ++|+|||++|.....       ..+++|+.++.+++++|++.++++||++||.++|+.....+..+ .+. ...+.|+
T Consensus        71 ~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~  150 (338)
T 1udb_A           71 DHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYG  150 (338)
T ss_dssp             HTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH
T ss_pred             ccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHH
Confidence              599999999975321       14578899999999999999999999999998875432211111 111 1123455


Q ss_pred             ccccccHHHHHHHHh-cC-CCeEEEEeCC-CCCC--------CCC---CC------------ccceEEeccc----ccCC
Q 044905          150 RNQPLTVPEFLQKVI-ET-DVSYTFIKTS-LTED--------FSP---ES------------SYNVVVSAEA----SVDA  199 (427)
Q Consensus       150 k~~~l~~E~~l~~l~-~~-gl~~tilRPG-~~~~--------~~~---~~------------~~~i~~~~~~----~~~~  199 (427)
                      .+| ...|.++..+. +. +++++++||+ .++.        ...   ..            ...+...+..    ....
T Consensus       151 ~sK-~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  229 (338)
T 1udb_A          151 KSK-LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTG  229 (338)
T ss_dssp             HHH-HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred             HHH-HHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCce
Confidence            554 56787777665 33 7999999974 2211        000   00            0011111110    0011


Q ss_pred             CCCcccHHHHHHHHHHHhcCcc-cccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          200 NDYKVAKSQIASLVADVFSNTA-VAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~-~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ..++||++|+|++++.++.++. ...+++||++++.   ..++.|++..+.+..+
T Consensus       230 ~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~---~~s~~e~~~~i~~~~g  281 (338)
T 1udb_A          230 VRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV---GNSVLDVVNAFSKACG  281 (338)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC---CEEHHHHHHHHHHHHT
T ss_pred             eeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC---ceeHHHHHHHHHHHhC
Confidence            1268999999999998886431 1224799999887   5567777777665433

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.89  E-value=9.3e-23  Score=201.17  Aligned_cols=229  Identities=14%  Similarity=0.131  Sum_probs=156.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..|+|||||||||||++|++.|+++|++|++++|+......+..           ...++.++.+|++|.+++.++++ 
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~l~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP-----------PVAGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC-----------SCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh-----------ccCCceEEEeeCCCHHHHHHHHhh
Confidence            355799999999999999999999999999999997643211100           01355689999999999999999 


Q ss_pred             -CcCEEEEccCCCCCC-C---CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC--CCCCCCccchhhhhcccc
Q 044905           81 -NAGKVVVTIGPTEDG-P---TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN--VLDGISSFFNNLFSRNQP  153 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~-~---~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~--~~~~~~~~~~~~~~k~~~  153 (427)
                       ++|+|||++|..... .   .+++|+.++.+++++|.+.++++||++||.++|+.....  +.++.. ...+.|+.++ 
T Consensus        87 ~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~-~~~~~Y~~sK-  164 (330)
T 2pzm_A           87 FKPTHVVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT-APFTSYGISK-  164 (330)
T ss_dssp             HCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC-CCCSHHHHHH-
T ss_pred             cCCCEEEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC-CCCChHHHHH-
Confidence             999999999976431 0   146788899999999999999999999999886543211  111111 1223455443 


Q ss_pred             ccHHHHHHHHhcCCCeEEEEeCC-CCCCCCC-CCccceE---Eecc---cccCCCCCcccHHHHHH-HHHHHhcCccccc
Q 044905          154 LTVPEFLQKVIETDVSYTFIKTS-LTEDFSP-ESSYNVV---VSAE---ASVDANDYKVAKSQIAS-LVADVFSNTAVAE  224 (427)
Q Consensus       154 l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~-~~~~~i~---~~~~---~~~~~~~~~i~v~DVA~-~v~~al~~~~~~~  224 (427)
                      ...|.++..   .+++++++||+ .++.... .....+.   ..+.   .... ...+++++|+|+ +++.++.++ .  
T Consensus       165 ~~~e~~~~~---~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~-~--  237 (330)
T 2pzm_A          165 TAGEAFLMM---SDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIADLSLQEGR-P--  237 (330)
T ss_dssp             HHHHHHHHT---CSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHHHHTSTTC-C--
T ss_pred             HHHHHHHHH---cCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHHHHHhhcC-C--
Confidence            445655544   38999999975 3332211 1000000   0010   0011 236899999999 999998764 2  


Q ss_pred             CcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          225 NKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       225 g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +++||++++.   ..++.|++..+.+..+
T Consensus       238 g~~~~v~~~~---~~s~~e~~~~i~~~~g  263 (330)
T 2pzm_A          238 TGVFNVSTGE---GHSIKEVFDVVLDYVG  263 (330)
T ss_dssp             CEEEEESCSC---CEEHHHHHHHHHHHHT
T ss_pred             CCEEEeCCCC---CCCHHHHHHHHHHHhC
Confidence            8999999987   5667777777765433

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.89  E-value=7.9e-23  Score=204.87  Aligned_cols=238  Identities=11%  Similarity=0.042  Sum_probs=160.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ++|||||||||||++|++.|+++|++|++++|+....  ..+......   +......++.++.+|++|.+++.+++++ 
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKN---PQAHIEGNMKLHYGDLTDSTCLVKIINEV  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC------------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhh---hccccCCCceEEEccCCCHHHHHHHHHhc
Confidence            6899999999999999999999999999999986531  111000000   0000123567899999999999999986 


Q ss_pred             -cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCC---CeEEEEecccccccccCCCC-CCCCccchhhhh
Q 044905           82 -AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGV---GHVAIIYDGNTTAASTYNVL-DGISSFFNNLFS  149 (427)
Q Consensus        82 -~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gV---k~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~  149 (427)
                       +|+|||++|.....       ..+++|+.++.+++++|...++   ++|||+||.++|+.....+. +..+....+.|+
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~  181 (375)
T 1t2a_A          102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYG  181 (375)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhH
Confidence             59999999975421       1456888899999999999998   89999999988765432111 111111224555


Q ss_pred             ccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc---------------cceEEecccccCCCCCcccHHHHHH
Q 044905          150 RNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS---------------YNVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       150 k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~---------------~~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      .++ ...|.++..+. +.+++++++||+ .++..... ..               ......+.+  ....+++|++|+|+
T Consensus       182 ~sK-~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~--~~~~~~i~v~Dva~  258 (375)
T 1t2a_A          182 AAK-LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNL--DAKRDWGHAKDYVE  258 (375)
T ss_dssp             HHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCT--TCEECCEEHHHHHH
T ss_pred             HHH-HHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCC--CceeeeEEHHHHHH
Confidence            554 56777777665 458999999985 33221110 00               001111111  12236999999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +++.++.++.   +++||++++.   ..++.|++..+.+..+.
T Consensus       259 a~~~~~~~~~---~~~~ni~~~~---~~s~~e~~~~i~~~~g~  295 (375)
T 1t2a_A          259 AMWLMLQNDE---PEDFVIATGE---VHSVREFVEKSFLHIGK  295 (375)
T ss_dssp             HHHHHHHSSS---CCCEEECCSC---CEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHhcCC---CceEEEeCCC---cccHHHHHHHHHHHhCC
Confidence            9999987542   4889999987   56777787777665443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.89  E-value=5.4e-23  Score=203.13  Aligned_cols=228  Identities=17%  Similarity=0.162  Sum_probs=156.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..+|+|||||||||||++|++.|+++|++|++++|+.... ..+..            ..++.++.+|++|.+++.++++
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~------------~~~~~~~~~Dl~d~~~~~~~~~   86 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD------------HPNLTFVEGSIADHALVNQLIG   86 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC------------CTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh------------cCCceEEEEeCCCHHHHHHHHh
Confidence            4578999999999999999999999999999999986431 11100            1355689999999999999998


Q ss_pred             C--cCEEEEccCCCCCCC----CccccHHHHHHHHHHHHHcCCCeEEEEecccccc----cccCCCCCCCCccch-hhhh
Q 044905           81 N--AGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTA----ASTYNVLDGISSFFN-NLFS  149 (427)
Q Consensus        81 g--~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~----~~~~~~~~~~~~~~~-~~~~  149 (427)
                      +  +|+|||++|......    .+++|+.++.+++++|...++++|||+||.++|+    .... +..+.. ... +.|+
T Consensus        87 ~~~~D~vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~-~p~~~~Y~  164 (333)
T 2q1w_A           87 DLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR-NPANSSYA  164 (333)
T ss_dssp             HHCCSEEEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC-CCTTCHHH
T ss_pred             ccCCcEEEECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC-CCCCCchH
Confidence            8  999999999764311    1567888999999999999999999999998875    3221 111111 112 3455


Q ss_pred             ccccccHHHHHHH-HhcCCCeEEEEeCC-CCCCCCCC-CccceE---Eecccc--cCCCCCcccHHHHHHHHHHHhcCcc
Q 044905          150 RNQPLTVPEFLQK-VIETDVSYTFIKTS-LTEDFSPE-SSYNVV---VSAEAS--VDANDYKVAKSQIASLVADVFSNTA  221 (427)
Q Consensus       150 k~~~l~~E~~l~~-l~~~gl~~tilRPG-~~~~~~~~-~~~~i~---~~~~~~--~~~~~~~i~v~DVA~~v~~al~~~~  221 (427)
                      ..+ ...|.++.. +.    +++++||+ +++..... ....+.   ..+...  .....++++++|+|++++.++.++.
T Consensus       165 ~sK-~~~E~~~~~s~~----~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~  239 (333)
T 2q1w_A          165 ISK-SANEDYLEYSGL----DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG  239 (333)
T ss_dssp             HHH-HHHHHHHHHHTC----CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC
T ss_pred             HHH-HHHHHHHHhhhC----CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC
Confidence            444 456766655 43    89999997 44332110 000000   001000  1112368999999999999997642


Q ss_pred             cccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          222 VAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       222 ~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                         +++||++++.   ..++.|++..+.+..+.
T Consensus       240 ---g~~~~v~~~~---~~s~~e~~~~i~~~~g~  266 (333)
T 2q1w_A          240 ---HGAYHFSSGT---DVAIKELYDAVVEAMAL  266 (333)
T ss_dssp             ---CEEEECSCSC---CEEHHHHHHHHHHHTTC
T ss_pred             ---CCEEEeCCCC---CccHHHHHHHHHHHhCC
Confidence               8999999887   56777888777765443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=3.7e-23  Score=204.12  Aligned_cols=236  Identities=16%  Similarity=0.193  Sum_probs=153.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +++|||||||||||++|+++|+++||+|++++|+++....+.... ..   . ....+++++.+|++|.+++.++++++|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~---~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d   79 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLL-DL---P-KAETHLTLWKADLADEGSFDEAIKGCT   79 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHH-TS---T-THHHHEEEEECCTTSTTTTHHHHTTCS
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHH-hc---c-cCCCeEEEEEcCCCCHHHHHHHHcCCC
Confidence            578999999999999999999999999999999876432221110 00   0 001346689999999999999999999


Q ss_pred             EEEEccCCCCCC---C---CccccHHHHHHHHHHHHHcC-CCeEEEEecccc-cccccC-CCCCCCC--c--------cc
Q 044905           84 KVVVTIGPTEDG---P---TSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNT-TAASTY-NVLDGIS--S--------FF  144 (427)
Q Consensus        84 ~Vi~~ag~~~~~---~---~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v-~~~~~~-~~~~~~~--~--------~~  144 (427)
                      +|||++++....   +   .+++|+.++.+++++|.+++ +++|||+||++. ++.... ...++..  .        ..
T Consensus        80 ~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (337)
T 2c29_D           80 GVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMT  159 (337)
T ss_dssp             EEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT
T ss_pred             EEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCc
Confidence            999999875321   1   45778999999999999988 999999999873 322111 1111100  0        01


Q ss_pred             hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccc-eE-----Eeccccc---CCCCCcccHHHHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYN-VV-----VSAEASV---DANDYKVAKSQIASLV  213 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~-i~-----~~~~~~~---~~~~~~i~v~DVA~~v  213 (427)
                      ...|+.++ +..|.++..+. ..|++++++||+ .+++........ +.     ..+....   .....++|++|+|+++
T Consensus       160 ~~~Y~~sK-~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~  238 (337)
T 2c29_D          160 AWMYFVSK-TLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAH  238 (337)
T ss_dssp             THHHHHHH-HHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHH
T ss_pred             cchHHHHH-HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHH
Confidence            12355444 45677665554 469999999997 333322111100 00     0111000   0111389999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +.++.++ . .+..|+++++    ..++.|++..+.+.
T Consensus       239 ~~~~~~~-~-~~~~~~~~~~----~~s~~e~~~~i~~~  270 (337)
T 2c29_D          239 IYLFENP-K-AEGRYICSSH----DCIILDLAKMLREK  270 (337)
T ss_dssp             HHHHHCT-T-CCEEEEECCE----EEEHHHHHHHHHHH
T ss_pred             HHHhcCc-c-cCceEEEeCC----CCCHHHHHHHHHHH
Confidence            9988754 2 3456765544    35777887777653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.89  E-value=4.6e-23  Score=198.69  Aligned_cols=206  Identities=13%  Similarity=0.142  Sum_probs=150.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      |+|||||||||||++|++.|+++|++|++++|.                            .+|+.|.+++.++++  ++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------------~~D~~d~~~~~~~~~~~~~   57 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------------LLDITNISQVQQVVQEIRP   57 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------------TSCTTCHHHHHHHHHHHCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------------ccCCCCHHHHHHHHHhcCC
Confidence            389999999999999999999999999999992                            158999999999998  79


Q ss_pred             CEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~l  154 (427)
                      |+|||+++....     +  ...++|+.++.+++++|++.|+ +|||+||.++|++....+. +..+....+.|+..+ +
T Consensus        58 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK-~  135 (287)
T 3sc6_A           58 HIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASK-Y  135 (287)
T ss_dssp             SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHH-H
T ss_pred             CEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHH-H
Confidence            999999997642     1  1567888899999999999998 7999999998766443222 222222234555554 4


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCc----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccc
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSPESS----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVA  223 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~  223 (427)
                      ..|.++..+   +.+++++||+ +++.......          ..+...+.    ...+++|++|+|++++.++.++.  
T Consensus       136 ~~E~~~~~~---~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~v~Dva~~~~~~~~~~~--  206 (287)
T 3sc6_A          136 AGEQFVKEL---HNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVAD----QIGSPTYVADLNVMINKLIHTSL--  206 (287)
T ss_dssp             HHHHHHHHH---CSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECS----CEECCEEHHHHHHHHHHHHTSCC--
T ss_pred             HHHHHHHHh---CCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecC----cccCceEHHHHHHHHHHHHhCCC--
Confidence            567666553   4489999997 3332221110          11222221    22369999999999999998653  


Q ss_pred             cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          224 ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       224 ~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                       +++||++++.   ..++.|++..+.+..+
T Consensus       207 -~~~~~i~~~~---~~s~~e~~~~i~~~~g  232 (287)
T 3sc6_A          207 -YGTYHVSNTG---SCSWFEFAKKIFSYAN  232 (287)
T ss_dssp             -CEEEECCCBS---CEEHHHHHHHHHHHHT
T ss_pred             -CCeEEEcCCC---cccHHHHHHHHHHHcC
Confidence             7899999987   5677777777766544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=1.7e-22  Score=201.74  Aligned_cols=237  Identities=9%  Similarity=0.028  Sum_probs=157.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ||+|||||||||||++|++.|+++|++|++++|+.+..  ..+.......    .....++.++.+|++|.+++.+++++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDP----HTCNPKFHLHYGDLSDTSNLTRILRE   76 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhcc----ccCCCceEEEECCCCCHHHHHHHHHh
Confidence            57999999999999999999999999999999987531  1121110000    00013567889999999999999986


Q ss_pred             --cCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCC---CeEEEEecccccccccCCCC-CCCCccchhhh
Q 044905           82 --AGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGV---GHVAIIYDGNTTAASTYNVL-DGISSFFNNLF  148 (427)
Q Consensus        82 --~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gV---k~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~  148 (427)
                        +|+|||++|......       .+++|+.++.+++++|...++   ++||++||.++|+....... +..+....+.|
T Consensus        77 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y  156 (372)
T 1db3_A           77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY  156 (372)
T ss_dssp             HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHH
T ss_pred             cCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChH
Confidence              699999999754321       346788899999999999998   89999999988765432111 11111123455


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-------------c--ceEEecccccCCCCCcccHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-------------Y--NVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-------------~--~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      +.++ ...|.++..+. +.+++++++|++ .++..... ..             .  .....+.+.  ...+++|++|+|
T Consensus       157 ~~sK-~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~--~~~~~i~v~Dva  233 (372)
T 1db3_A          157 AVAK-LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD--SLRDWGHAKDYV  233 (372)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTT--CEECCEEHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCC--ceeeeeEHHHHH
Confidence            5554 56777777665 468999999974 33221110 00             0  111112111  223699999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++++.++.++   .+++||++++.   ..++.|++..+.+..+
T Consensus       234 ~a~~~~~~~~---~~~~~ni~~~~---~~s~~e~~~~i~~~~g  270 (372)
T 1db3_A          234 KMQWMMLQQE---QPEDFVIATGV---QYSVRQFVEMAAAQLG  270 (372)
T ss_dssp             HHHHHTTSSS---SCCCEEECCCC---CEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHhcC---CCceEEEcCCC---ceeHHHHHHHHHHHhC
Confidence            9999998754   25889999987   5677888888876544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.89  E-value=6.9e-23  Score=202.06  Aligned_cols=232  Identities=15%  Similarity=0.135  Sum_probs=153.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH---HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA---QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~---~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +|+|||||||||||++|++.|+++||+|++++|+++..   ..+....         ...+++++.+|++|.+++.++++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~---------~~~~~~~~~~Dl~d~~~~~~~~~   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ---------ELGDLKIFRADLTDELSFEAPIA   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG---------GGSCEEEEECCTTTSSSSHHHHT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC---------CCCcEEEEecCCCChHHHHHHHc
Confidence            47899999999999999999999999999999987532   2221111         12356789999999999999999


Q ss_pred             CcCEEEEccCCCCC---CC---CccccHHHHHHHHHHHHHcC-CCeEEEEeccc-ccccccC----CCCCCC--C-----
Q 044905           81 NAGKVVVTIGPTED---GP---TSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGN-TTAASTY----NVLDGI--S-----  141 (427)
Q Consensus        81 g~d~Vi~~ag~~~~---~~---~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~-v~~~~~~----~~~~~~--~-----  141 (427)
                      ++|+|||+|++...   ++   .+++|+.++.+++++|.+++ +++|||+||++ +++....    ...+..  .     
T Consensus        80 ~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~  159 (338)
T 2rh8_A           80 GCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLT  159 (338)
T ss_dssp             TCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC----
T ss_pred             CCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhcc
Confidence            99999999986532   11   56789999999999999986 99999999876 3321111    111110  0     


Q ss_pred             cc--chhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccceE------Eecccc----------cCCCC
Q 044905          142 SF--FNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYNVV------VSAEAS----------VDAND  201 (427)
Q Consensus       142 ~~--~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~i~------~~~~~~----------~~~~~  201 (427)
                      +.  ....|+.+| ...|.++..+. ..|+++++|||+ .+++..........      ..+...          .....
T Consensus       160 ~~~~~~~~Y~~sK-~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  238 (338)
T 2rh8_A          160 SAKPPTWGYPASK-TLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSV  238 (338)
T ss_dssp             ---CCCCCCTTSC-CHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSE
T ss_pred             ccCCccchHHHHH-HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcc
Confidence            00  001355555 56777776654 469999999997 44433221111000      011000          00112


Q ss_pred             CcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          202 YKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +++|++|+|++++.+++++.  .++.|+++++    ..++.|+++.+.+.
T Consensus       239 ~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~----~~s~~e~~~~l~~~  282 (338)
T 2rh8_A          239 SIAHVEDVCRAHIFVAEKES--ASGRYICCAA----NTSVPELAKFLSKR  282 (338)
T ss_dssp             EEEEHHHHHHHHHHHHHCTT--CCEEEEECSE----EECHHHHHHHHHHH
T ss_pred             cEEEHHHHHHHHHHHHcCCC--cCCcEEEecC----CCCHHHHHHHHHHh
Confidence            59999999999999887542  3457877654    35777887777653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.89  E-value=1e-22  Score=197.87  Aligned_cols=219  Identities=14%  Similarity=0.050  Sum_probs=141.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|||||||||||++|++.|+++||+|++++|++...                      -+..|    +.....+.++|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------------------~~~~~----~~~~~~l~~~d~   54 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------------------RITWD----ELAASGLPSCDA   54 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------------------EEEHH----HHHHHCCCSCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------------------eeecc----hhhHhhccCCCE
Confidence            7899999999999999999999999999999987531                      12222    223456789999


Q ss_pred             EEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCe--EEEEecccccccccCCCCCCCCccc-hhhhhc
Q 044905           85 VVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGH--VAIIYDGNTTAASTYNVLDGISSFF-NNLFSR  150 (427)
Q Consensus        85 Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~--~V~vSSs~v~~~~~~~~~~~~~~~~-~~~~~k  150 (427)
                      |||+++......           ....|+.++.++++++...++++  +|+.||+++|+.....+..+..+.. ...++.
T Consensus        55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~  134 (298)
T 4b4o_A           55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSN  134 (298)
T ss_dssp             EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHH
T ss_pred             EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHH
Confidence            999998532211           34567889999999999988655  6666777777665443332222222 222332


Q ss_pred             cccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCccce---EEec----ccccCCCCCcccHHHHHHHHHHHhcCccc
Q 044905          151 NQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPESSYNV---VVSA----EASVDANDYKVAKSQIASLVADVFSNTAV  222 (427)
Q Consensus       151 ~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~~i---~~~~----~~~~~~~~~~i~v~DVA~~v~~al~~~~~  222 (427)
                      ..  ...+........+++++++||+ .++.. .+....+   ...+    .+......+|||++|+|+++..++.++. 
T Consensus       135 ~~--~~~e~~~~~~~~~~~~~~~r~~~v~g~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~-  210 (298)
T 4b4o_A          135 LV--TKWEAAARLPGDSTRQVVVRSGVVLGRG-GGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH-  210 (298)
T ss_dssp             HH--HHHHHHHCCSSSSSEEEEEEECEEECTT-SHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT-
T ss_pred             HH--HHHHHHHHhhccCCceeeeeeeeEEcCC-CCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC-
Confidence            21  1122222223678999999997 33321 1100000   0000    1112223479999999999999998653 


Q ss_pred             ccCcEEEEecCCCCChhhHHHHHHHHHhccchhhh
Q 044905          223 AENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAY  257 (427)
Q Consensus       223 ~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~~  257 (427)
                       .+++||+++++   ..++.|++..+.+..+++..
T Consensus       211 -~~g~yn~~~~~---~~t~~e~~~~ia~~lgrp~~  241 (298)
T 4b4o_A          211 -VHGVLNGVAPS---SATNAEFAQTFGAALGRRAF  241 (298)
T ss_dssp             -CCEEEEESCSC---CCBHHHHHHHHHHHHTCCCC
T ss_pred             -CCCeEEEECCC---ccCHHHHHHHHHHHhCcCCc
Confidence             46799999998   56677777777776665543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.89  E-value=8.1e-23  Score=202.34  Aligned_cols=228  Identities=9%  Similarity=0.077  Sum_probs=155.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+|+|||||||||||++|++.|+++|++|++++|+..... .+..      +   ....+++++.+|+.|.     ++.
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~---~~~~~~~~~~~D~~~~-----~~~   90 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH------W---IGHENFELINHDVVEP-----LYI   90 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG------G---TTCTTEEEEECCTTSC-----CCC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhh------h---ccCCceEEEeCccCCh-----hhc
Confidence            46789999999999999999999999999999999754211 1100      0   0123567899999875     367


Q ss_pred             CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC------CCccchhh
Q 044905           81 NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG------ISSFFNNL  147 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~------~~~~~~~~  147 (427)
                      ++|+|||+++....     ++  .+++|+.++.+++++|...++ +|||+||.++|+.....+..+      .+....+.
T Consensus        91 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~  169 (343)
T 2b69_A           91 EVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRAC  169 (343)
T ss_dssp             CCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHH
T ss_pred             CCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCc
Confidence            89999999997542     11  457899999999999999997 999999998876543221111      11112245


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC---Cc-----------cceEEecccccCCCCCcccHHHHHH
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE---SS-----------YNVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~---~~-----------~~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      |+.++ +..|.++..+. +.+++++++||+ +++.....   ..           ..+...+.+.  ...++++++|+|+
T Consensus       170 Y~~sK-~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~v~Dva~  246 (343)
T 2b69_A          170 YDEGK-RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGS--QTRAFQYVSDLVN  246 (343)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSC--CEEECEEHHHHHH
T ss_pred             hHHHH-HHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCC--eEEeeEeHHHHHH
Confidence            65554 56777776654 569999999997 33332110   00           0111112111  1236899999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +++.++..+   .+++||++++.   ..++.|++..+.+..+
T Consensus       247 a~~~~~~~~---~~~~~~i~~~~---~~s~~e~~~~i~~~~g  282 (343)
T 2b69_A          247 GLVALMNSN---VSSPVNLGNPE---EHTILEFAQLIKNLVG  282 (343)
T ss_dssp             HHHHHHTSS---CCSCEEESCCC---EEEHHHHHHHHHHHHT
T ss_pred             HHHHHHhcC---CCCeEEecCCC---CCcHHHHHHHHHHHhC
Confidence            999988743   37899999987   5677777777765433

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.89  E-value=2.3e-22  Score=201.22  Aligned_cols=218  Identities=14%  Similarity=0.158  Sum_probs=150.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEec-CCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESN-FDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gD-l~D~~sl~~al   79 (427)
                      .+|+|+||||||+||++|++.|+++|++|++++|++++.  ..+..            ..+++++.+| ++|++++.+++
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~------------~~~v~~v~~D~l~d~~~l~~~~   71 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA------------IPNVTLFQGPLLNNVPLMDTLF   71 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT------------STTEEEEESCCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh------------cCCcEEEECCccCCHHHHHHHH
Confidence            357899999999999999999999999999999998754  22211            1245689999 99999999999


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHH
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPE  158 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~  158 (427)
                      +++|+|||+++...    ...|..+ .+++++|+++| ++||||+||.+..   .+.. .+.     ..|..++ ...|.
T Consensus        72 ~~~d~Vi~~a~~~~----~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~---~~~~-~~~-----~~y~~sK-~~~E~  136 (352)
T 1xgk_A           72 EGAHLAFINTTSQA----GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHS---LYGP-WPA-----VPMWAPK-FTVEN  136 (352)
T ss_dssp             TTCSEEEECCCSTT----SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGG---GTSS-CCC-----CTTTHHH-HHHHH
T ss_pred             hcCCEEEEcCCCCC----cHHHHHH-HHHHHHHHHcCCccEEEEeCCcccc---ccCC-CCC-----ccHHHHH-HHHHH
Confidence            99999999987642    2345555 99999999999 9999999987521   1110 011     1222332 33554


Q ss_pred             HHHHHhcCCCeEEEEeCCCCCCCCCCC---cc--------ceEEecccccCCCCCcccH-HHHHHHHHHHhcCcc-cccC
Q 044905          159 FLQKVIETDVSYTFIKTSLTEDFSPES---SY--------NVVVSAEASVDANDYKVAK-SQIASLVADVFSNTA-VAEN  225 (427)
Q Consensus       159 ~l~~l~~~gl~~tilRPG~~~~~~~~~---~~--------~i~~~~~~~~~~~~~~i~v-~DVA~~v~~al~~~~-~~~g  225 (427)
                      ++   ...++++++||||++.+.....   ..        .+...-........+++++ +|+|++++.++.++. ...+
T Consensus       137 ~~---~~~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g  213 (352)
T 1xgk_A          137 YV---RQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG  213 (352)
T ss_dssp             HH---HTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred             HH---HHcCCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCC
Confidence            44   3569999999998433211110   00        0101001112233468999 899999999997542 3468


Q ss_pred             cEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          226 KVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       226 ~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ++|+++++    ..++.|++..+.+..++
T Consensus       214 ~~~~l~~~----~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          214 HRIALTFE----TLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             CEEEECSE----EECHHHHHHHHHHHHTS
T ss_pred             eEEEEecC----CCCHHHHHHHHHHHHCC
Confidence            99999964    57788888888775443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.89  E-value=8e-23  Score=201.07  Aligned_cols=240  Identities=11%  Similarity=0.093  Sum_probs=160.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE-EecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV-ESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv-~gDl~D~~sl~~al~g   81 (427)
                      ..++|||||||||||++|++.|+++|++|++++|+.++...+......      ....+++++ .+|++|.+++.+++++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~~D~~d~~~~~~~~~~   83 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDA------KYPGRFETAVVEDMLKQGAYDEVIKG   83 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH------HSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhc------cCCCceEEEEecCCcChHHHHHHHcC
Confidence            457899999999999999999999999999999987765444322100      001345677 7999999999999999


Q ss_pred             cCEEEEccCCCCCCC----CccccHHHHHHHHHHHHH-cCCCeEEEEecccccccccC-----CCCCCC-----------
Q 044905           82 AGKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQL-AGVGHVAIIYDGNTTAASTY-----NVLDGI-----------  140 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~-~gVk~~V~vSSs~v~~~~~~-----~~~~~~-----------  140 (427)
                      +|+|||+++......    .+++|+.++.+++++|.. .++++|||+||.++++....     +..+..           
T Consensus        84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~  163 (342)
T 1y1p_A           84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT  163 (342)
T ss_dssp             CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred             CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence            999999999764321    457889999999999984 68999999999887643211     111111           


Q ss_pred             -----CccchhhhhccccccHHHHHHHHhc---CCCeEEEEeCC-CCCCCCCCCcc-----ceE---Eeccc----ccCC
Q 044905          141 -----SSFFNNLFSRNQPLTVPEFLQKVIE---TDVSYTFIKTS-LTEDFSPESSY-----NVV---VSAEA----SVDA  199 (427)
Q Consensus       141 -----~~~~~~~~~k~~~l~~E~~l~~l~~---~gl~~tilRPG-~~~~~~~~~~~-----~i~---~~~~~----~~~~  199 (427)
                           +....+.|+.++ +..|.++..+..   .+++++++||| +++........     .+.   ..+..    ....
T Consensus       164 ~~~~~~~~~~~~Y~~sK-~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (342)
T 1y1p_A          164 LPESDPQKSLWVYAASK-TEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMP  242 (342)
T ss_dssp             SCTTSTTHHHHHHHHHH-HHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCC
T ss_pred             ccccccccchHHHHHHH-HHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCC
Confidence                 111234566555 567877766542   37999999997 33332211100     000   00100    0011


Q ss_pred             CCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          200 NDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      ...++|++|+|++++.++.++ ...+..+ ++++.   ..++.|++..+.+..+.
T Consensus       243 ~~~~v~v~Dva~a~~~~~~~~-~~~g~~~-~~~g~---~~s~~e~~~~i~~~~~~  292 (342)
T 1y1p_A          243 PQYYVSAVDIGLLHLGCLVLP-QIERRRV-YGTAG---TFDWNTVLATFRKLYPS  292 (342)
T ss_dssp             SEEEEEHHHHHHHHHHHHHCT-TCCSCEE-EECCE---EECHHHHHHHHHHHCTT
T ss_pred             cCCEeEHHHHHHHHHHHHcCc-ccCCceE-EEeCC---CCCHHHHHHHHHHHCCC
Confidence            236899999999999988754 2345544 34444   46788888888765543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.89  E-value=8.7e-23  Score=195.93  Aligned_cols=207  Identities=13%  Similarity=0.097  Sum_probs=154.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+++|+||||||+||++|++.|+++|++|++++|+..+..                ..++.++.+|++|.+++.+++++
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------~~~~~~~~~Dl~d~~~~~~~~~~   64 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------------GPNEECVQCDLADANAVNAMVAG   64 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------------CTTEEEEECCTTCHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------------CCCCEEEEcCCCCHHHHHHHHcC
Confidence            56778999999999999999999999999999999975422                12446899999999999999999


Q ss_pred             cCEEEEccCCCCCCC---CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC--CCCCCCccchhhhhccccccH
Q 044905           82 AGKVVVTIGPTEDGP---TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN--VLDGISSFFNNLFSRNQPLTV  156 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~---~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~--~~~~~~~~~~~~~~k~~~l~~  156 (427)
                      +|+|||++|......   .+++|+.++.+++++|++.++++||++||..+++.....  ..+..+......|+.+| ...
T Consensus        65 ~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK-~~~  143 (267)
T 3rft_A           65 CDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSK-CFG  143 (267)
T ss_dssp             CSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHH-HHH
T ss_pred             CCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHH-HHH
Confidence            999999999865443   567899999999999999999999999998876432211  11112222234555554 557


Q ss_pred             HHHHHHHh-cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCC
Q 044905          157 PEFLQKVI-ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPS  235 (427)
Q Consensus       157 E~~l~~l~-~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~  235 (427)
                      |.+.+.+. +.|+++++||||.+.....          ....  ...+++++|+++.+..++..+ ...+.++++.++..
T Consensus       144 e~~~~~~a~~~g~~~~~vr~~~v~~~~~----------~~~~--~~~~~~~~d~a~~~~~~~~~~-~~~~~~~~~~s~~~  210 (267)
T 3rft_A          144 ENLARMYFDKFGQETALVRIGSCTPEPN----------NYRM--LSTWFSHDDFVSLIEAVFRAP-VLGCPVVWGASAND  210 (267)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECBCSSSCC----------STTH--HHHBCCHHHHHHHHHHHHHCS-CCCSCEEEECCCCT
T ss_pred             HHHHHHHHHHhCCeEEEEEeecccCCCC----------CCCc--eeeEEcHHHHHHHHHHHHhCC-CCCceEEEEeCCCC
Confidence            77776655 6799999999984432110          0011  124899999999999998754 34567888888764


Q ss_pred             CCh
Q 044905          236 APA  238 (427)
Q Consensus       236 ~~~  238 (427)
                      .+.
T Consensus       211 ~~~  213 (267)
T 3rft_A          211 AGW  213 (267)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.89  E-value=6.1e-23  Score=198.81  Aligned_cols=212  Identities=12%  Similarity=0.096  Sum_probs=151.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--A   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--~   82 (427)
                      |+|+|||||||||++|++.|+ +|++|++++|+..                        ++.+|+.|.+++.+++++  +
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------------~~~~D~~d~~~~~~~~~~~~~   55 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------------EFCGDFSNPKGVAETVRKLRP   55 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------------SSCCCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------------cccccCCCHHHHHHHHHhcCC
Confidence            589999999999999999999 8999999999861                        467899999999999986  9


Q ss_pred             CEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~l  154 (427)
                      |+|||+++....     ++  .+++|+.++.+++++|+..++ +|||+||.++|+....... +..+....+.|+..+ +
T Consensus        56 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK-~  133 (299)
T 1n2s_A           56 DVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTK-L  133 (299)
T ss_dssp             SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHH-H
T ss_pred             CEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHH-H
Confidence            999999997542     11  456788899999999999998 8999999998765432121 111222234555554 4


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCc----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcc-c
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSPESS----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTA-V  222 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~-~  222 (427)
                      ..|.++..+   ..+++++||+ +++.......          ..+...+  .  ...+++|++|+|++++.++.++. .
T Consensus       134 ~~E~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~i~v~Dva~~~~~~~~~~~~~  206 (299)
T 1n2s_A          134 AGEKALQDN---CPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--D--QYGAPTGAELLADCTAHAIRVALNK  206 (299)
T ss_dssp             HHHHHHHHH---CSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--S--CEECCEEHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHh---CCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--C--cccCCeeHHHHHHHHHHHHHHhccc
Confidence            567666554   3489999997 3333211110          0111211  1  22369999999999999987542 1


Q ss_pred             c-cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          223 A-ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       223 ~-~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      . .+++||++++.   ..++.|++..+.+..+
T Consensus       207 ~~~~~~~~i~~~~---~~s~~e~~~~i~~~~g  235 (299)
T 1n2s_A          207 PEVAGLYHLVAGG---TTTWHDYAALVFDEAR  235 (299)
T ss_dssp             GGGCEEEECCCBS---CEEHHHHHHHHHHHHH
T ss_pred             cccCceEEEeCCC---CCCHHHHHHHHHHHhC
Confidence            2 48999999987   5667777777655433

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.89  E-value=4e-22  Score=193.80  Aligned_cols=217  Identities=16%  Similarity=0.235  Sum_probs=147.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-------chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-------GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-------~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |++|+||||||++|++|++.|+++|++|++++|++       ++...+...          ...+++++.+|++|++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l----------~~~~v~~v~~D~~d~~~l~   71 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNY----------QSLGVILLEGDINDHETLV   71 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHH----------HHTTCEEEECCTTCHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHH----------HhCCCEEEEeCCCCHHHHH
Confidence            57899999999999999999999999999999997       333322111          0134568999999999999


Q ss_pred             HHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhcccccc
Q 044905           77 KAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~  155 (427)
                      ++++++|+|||+++...        +.++.+++++|+++| ++|||  +|+.  +. ......+..+ ....| ..+ ..
T Consensus        72 ~~~~~~d~vi~~a~~~~--------~~~~~~l~~aa~~~g~v~~~v--~S~~--g~-~~~~~~~~~p-~~~~y-~sK-~~  135 (307)
T 2gas_A           72 KAIKQVDIVICAAGRLL--------IEDQVKIIKAIKEAGNVKKFF--PSEF--GL-DVDRHDAVEP-VRQVF-EEK-AS  135 (307)
T ss_dssp             HHHTTCSEEEECSSSSC--------GGGHHHHHHHHHHHCCCSEEE--CSCC--SS-CTTSCCCCTT-HHHHH-HHH-HH
T ss_pred             HHHhCCCEEEECCcccc--------cccHHHHHHHHHhcCCceEEe--eccc--cc-CcccccCCCc-chhHH-HHH-HH
Confidence            99999999999998642        236789999999998 99998  3321  21 1111111111 12334 332 33


Q ss_pred             HHHHHHHHhcCCCeEEEEeCC-CCCCCCCCC---------ccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          156 VPEFLQKVIETDVSYTFIKTS-LTEDFSPES---------SYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       156 ~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~---------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      .|.++   .+.+++|+++||| +++++.+..         ...+...+.+  ....++++++|+|++++.++.++ ...|
T Consensus       136 ~e~~~---~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~~~~~~l~~~-~~~~  209 (307)
T 2gas_A          136 IRRVI---EAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDG--NVKGAYVTEADVGTFTIRAANDP-NTLN  209 (307)
T ss_dssp             HHHHH---HHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTS--CSEEEEECHHHHHHHHHHHHTCG-GGTT
T ss_pred             HHHHH---HHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCC--CcceEEeeHHHHHHHHHHHHcCc-cccC
Confidence            55444   3578999999998 444432211         0112222211  22346899999999999999865 3457


Q ss_pred             cEEEEecC-CCCChhhHHHHHHHHHhccchh
Q 044905          226 KVVKVFTD-PSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       226 ~~~nI~~~-~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      +.+++.++ .   ..++.|+++.+.+..++.
T Consensus       210 ~~~~~~~~~~---~~s~~e~~~~~~~~~g~~  237 (307)
T 2gas_A          210 KAVHIRLPKN---YLTQNEVIALWEKKIGKT  237 (307)
T ss_dssp             EEEECCCGGG---EEEHHHHHHHHHHHHTSC
T ss_pred             ceEEEeCCCC---cCCHHHHHHHHHHHhCCC
Confidence            88888754 4   467788888887765543

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.89  E-value=8.7e-23  Score=202.98  Aligned_cols=226  Identities=11%  Similarity=0.112  Sum_probs=157.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-----CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-----FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-----~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |+|||||||||||++|++.|+++|     ++|++++|++.... +             ...+++++.+|++|.+++.+++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~-------------~~~~~~~~~~Dl~d~~~~~~~~   67 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-H-------------EDNPINYVQCDISDPDDSQAKL   67 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-C-------------CSSCCEEEECCTTSHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-c-------------ccCceEEEEeecCCHHHHHHHH
Confidence            689999999999999999999999     99999999876422 0             0235678999999999999999


Q ss_pred             cC---cCEEEEccCCCCCCC--CccccHHHHHHHHHHHHHc--CCCeEE-------EEeccccccccc---CCCCCCCCc
Q 044905           80 GN---AGKVVVTIGPTEDGP--TSEVSTSDAFQVIQAAQLA--GVGHVA-------IIYDGNTTAAST---YNVLDGISS  142 (427)
Q Consensus        80 ~g---~d~Vi~~ag~~~~~~--~~~vn~~~~~~ll~Aa~~~--gVk~~V-------~vSSs~v~~~~~---~~~~~~~~~  142 (427)
                      ++   +|+|||+++....++  ..++|+.++.+++++|++.  ++++||       |+||.++|+...   .+..+..+.
T Consensus        68 ~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~  147 (364)
T 2v6g_A           68 SPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPR  147 (364)
T ss_dssp             TTCTTCCEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCC
T ss_pred             hcCCCCCEEEECCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccC
Confidence            98   999999999764332  5678999999999999998  899998       688888765531   111111111


Q ss_pred             c-chhhhhccccccHHHHHHHHh-cCC-CeEEEEeCC-CCCCCCCCCcc--------ceE--Eeccc-c-cC------CC
Q 044905          143 F-FNNLFSRNQPLTVPEFLQKVI-ETD-VSYTFIKTS-LTEDFSPESSY--------NVV--VSAEA-S-VD------AN  200 (427)
Q Consensus       143 ~-~~~~~~k~~~l~~E~~l~~l~-~~g-l~~tilRPG-~~~~~~~~~~~--------~i~--~~~~~-~-~~------~~  200 (427)
                      . ..+.|.     .+|.++..+. ..+ ++++++||+ +++........        ...  ..+.. . ..      .-
T Consensus       148 ~~~~~~y~-----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~  222 (364)
T 2v6g_A          148 LKYMNFYY-----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGY  222 (364)
T ss_dssp             CSSCCHHH-----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSC
T ss_pred             CccchhhH-----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccccccc
Confidence            1 112232     3677776655 456 999999997 44332211000        000  01110 1 11      11


Q ss_pred             CCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          201 DYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      .+++|++|+|++++.++.++ ...+++||++++.   ..++.|++..+.+..+
T Consensus       223 ~~~~~v~Dva~a~~~~~~~~-~~~g~~~ni~~~~---~~s~~e~~~~i~~~~g  271 (364)
T 2v6g_A          223 SDCSDADLIAEHHIWAAVDP-YAKNEAFNVSNGD---VFKWKHFWKVLAEQFG  271 (364)
T ss_dssp             BCCEEHHHHHHHHHHHHHCG-GGTTEEEEECCSC---CBCHHHHHHHHHHHHT
T ss_pred             CCCCcHHHHHHHHHHHHhCC-CCCCceEEecCCC---cCCHHHHHHHHHHHhC
Confidence            36788899999999999865 3367899999987   4666777766665433

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.89  E-value=1.2e-22  Score=198.34  Aligned_cols=223  Identities=13%  Similarity=0.093  Sum_probs=158.3

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            6 TVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      +|||||||||||++|++.|+++  |++|++++|+.....                  ++.++.+|++|.+++.++++  +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------------~~~~~~~D~~d~~~~~~~~~~~~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------------GIKFITLDVSNRDEIDRAVEKYS   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------------TCCEEECCTTCHHHHHHHHHHTT
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------------CceEEEecCCCHHHHHHHHhhcC
Confidence            5999999999999999999999  899999998765321                  12489999999999999998  8


Q ss_pred             cCEEEEccCCCCC----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-CCC-CCCCccchhhhhcccc
Q 044905           82 AGKVVVTIGPTED----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-NVL-DGISSFFNNLFSRNQP  153 (427)
Q Consensus        82 ~d~Vi~~ag~~~~----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-~~~-~~~~~~~~~~~~k~~~  153 (427)
                      +|+|||+++....    +  ..+++|+.++.+++++|++.++++|||+||.++|+.... ... +..+....+.|+.++ 
T Consensus        63 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK-  141 (317)
T 3ajr_A           63 IDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTK-  141 (317)
T ss_dssp             CCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHH-
T ss_pred             CcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHH-
Confidence            9999999987531    1  145788999999999999999999999999998765321 111 111111234555554 


Q ss_pred             ccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----------------ccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          154 LTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----------------SYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       154 l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----------------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      +..|.++..+. +.|++++++||+ +++....+.                ...+...+  ......+++|++|+|++++.
T Consensus       142 ~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~  219 (317)
T 3ajr_A          142 IAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYL--APNRALPMMYMPDALKALVD  219 (317)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECS--CTTCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeec--CccceeeeeEHHHHHHHHHH
Confidence            56777776654 568999999964 444221100                00111111  11223468999999999999


Q ss_pred             HhcCccc-c-cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          216 VFSNTAV-A-ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       216 al~~~~~-~-~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ++.++.. . .+++||++++    ..++.+++..+.+..+
T Consensus       220 ~l~~~~~~~~~g~~~~i~~~----~~s~~e~~~~i~~~~~  255 (317)
T 3ajr_A          220 LYEADRDKLVLRNGYNVTAY----TFTPSELYSKIKERIP  255 (317)
T ss_dssp             HHHCCGGGCSSCSCEECCSE----EECHHHHHHHHHTTCC
T ss_pred             HHhCCccccccCceEecCCc----cccHHHHHHHHHHHCC
Confidence            9876532 1 3589999864    4678888888877654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=5e-22  Score=197.95  Aligned_cols=216  Identities=12%  Similarity=0.147  Sum_probs=157.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..|+||||||||+||++|++.|+++ |+ +|++++|++.+...+.....         ..++.++.+|++|.+++.+++
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---------~~~v~~~~~Dl~d~~~l~~~~   89 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---------DPRMRFFIGDVRDLERLNYAL   89 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---------CTTEEEEECCTTCHHHHHHHT
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---------CCCEEEEECCCCCHHHHHHHH
Confidence            34679999999999999999999999 97 99999999776554432111         135678999999999999999


Q ss_pred             cCcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccc
Q 044905           80 GNAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQ  152 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~  152 (427)
                      +++|+|||++|....     .  ..+++|+.++.+++++|...|+++||++||...+.        +     .+.|+.++
T Consensus        90 ~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------p-----~~~Y~~sK  156 (344)
T 2gn4_A           90 EGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------P-----INLYGATK  156 (344)
T ss_dssp             TTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------C-----CSHHHHHH
T ss_pred             hcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------C-----ccHHHHHH
Confidence            999999999997542     1  15678999999999999999999999999865321        1     12444444


Q ss_pred             cccHHHHHHHHhc----CCCeEEEEeCC-CCCCCCC--CCc------c--ceEEecccccCCCCCcccHHHHHHHHHHHh
Q 044905          153 PLTVPEFLQKVIE----TDVSYTFIKTS-LTEDFSP--ESS------Y--NVVVSAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       153 ~l~~E~~l~~l~~----~gl~~tilRPG-~~~~~~~--~~~------~--~i~~~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                       ...|.++..+..    .|++++++||| +++....  +..      .  .+.+..   ......+++++|+|++++.++
T Consensus       157 -~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~---~~~~r~~i~v~D~a~~v~~~l  232 (344)
T 2gn4_A          157 -LCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITD---IRMTRFWITLDEGVSFVLKSL  232 (344)
T ss_dssp             -HHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESC---TTCEEEEECHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeC---CCeEEeeEEHHHHHHHHHHHH
Confidence             557877777652    58999999998 4433211  000      0  122211   111125899999999999998


Q ss_pred             cCcccccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          218 SNTAVAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       218 ~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      .++  ..+++|++.++    ..++.+++..+.
T Consensus       233 ~~~--~~g~~~~~~~~----~~s~~el~~~i~  258 (344)
T 2gn4_A          233 KRM--HGGEIFVPKIP----SMKMTDLAKALA  258 (344)
T ss_dssp             HHC--CSSCEEEECCC----EEEHHHHHHHHC
T ss_pred             hhc--cCCCEEecCCC----cEEHHHHHHHHH
Confidence            754  35789988665    477888888874

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.88  E-value=1e-22  Score=204.47  Aligned_cols=234  Identities=10%  Similarity=0.017  Sum_probs=160.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-----HHHHHHHHhhhhhhhhhhhc-cceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-----AQELARLAASYKILSKEELK-RLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-----~~~l~~~~~~~~~~~~~~~~-rl~vv~gDl~D~~sl~~a   78 (427)
                      ++|||||||||||++|++.|+++|++|++++|+.+.     ...+.....       .... ++.++.+|++|.+++.++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~Dl~d~~~~~~~  101 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-------NVNKALMKLHYADLTDASSLRRW  101 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------------CCEEEEECCTTCHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccc-------cccccceEEEECCCCCHHHHHHH
Confidence            689999999999999999999999999999998753     111100000       0012 567899999999999999


Q ss_pred             hcC--cCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCC-----eEEEEecccccccccCCCCCCCCccc
Q 044905           79 IGN--AGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVG-----HVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        79 l~g--~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk-----~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                      +++  +|+|||++|.....       ..+++|+.++.+++++|...+++     +|||+||.++|+....+..+..+...
T Consensus       102 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~  181 (381)
T 1n7h_A          102 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHP  181 (381)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCC
T ss_pred             HHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCC
Confidence            986  59999999976421       14577888999999999998876     99999999987654331112112222


Q ss_pred             hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-------------c--ceEEecccccCCCCCcccH
Q 044905          145 NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-------------Y--NVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-------------~--~i~~~~~~~~~~~~~~i~v  206 (427)
                      .+.|+..+ +..|.++..+. +.+++++++|++ .++..... ..             .  .....+.+.  ...+++++
T Consensus       182 ~~~Y~~sK-~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~--~~~~~v~v  258 (381)
T 1n7h_A          182 RSPYAASK-CAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQ--ASRDWGFA  258 (381)
T ss_dssp             CSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTT--CEEECEEH
T ss_pred             CCchHHHH-HHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCC--ceeeeEEH
Confidence            34555554 56787777665 458999999974 22221110 00             0  011111111  12368999


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +|+|++++.++.++.   +++||++++.   ..++.|++..+.+..+.
T Consensus       259 ~Dva~a~~~~~~~~~---~~~~~i~~~~---~~s~~e~~~~i~~~~g~  300 (381)
T 1n7h_A          259 GDYVEAMWLMLQQEK---PDDYVVATEE---GHTVEEFLDVSFGYLGL  300 (381)
T ss_dssp             HHHHHHHHHHHTSSS---CCEEEECCSC---EEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC---CCeEEeeCCC---CCcHHHHHHHHHHHcCC
Confidence            999999999997542   5899999987   67788888888765543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.88  E-value=6.1e-23  Score=196.36  Aligned_cols=211  Identities=14%  Similarity=0.106  Sum_probs=152.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |++||||||||+||++|++.|+++|++|++++|++...  +              ..++.++.+|++|.+++.++++++|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~--------------~~~~~~~~~Dl~d~~~~~~~~~~~d   65 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--A--------------EAHEEIVACDLADAQAVHDLVKDCD   65 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--C--------------CTTEEECCCCTTCHHHHHHHHTTCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--c--------------CCCccEEEccCCCHHHHHHHHcCCC
Confidence            46899999999999999999999999999999987531  0              0134588999999999999999999


Q ss_pred             EEEEccCCCCCCC---CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC--CCCCCCCccchhhhhccccccHHH
Q 044905           84 KVVVTIGPTEDGP---TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY--NVLDGISSFFNNLFSRNQPLTVPE  158 (427)
Q Consensus        84 ~Vi~~ag~~~~~~---~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~--~~~~~~~~~~~~~~~k~~~l~~E~  158 (427)
                      +|||+++......   .+++|+.++.+++++|...++++|||+||.++++....  +..+..+......|+..+ ...|.
T Consensus        66 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK-~~~e~  144 (267)
T 3ay3_A           66 GIIHLGGVSVERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSK-CFGED  144 (267)
T ss_dssp             EEEECCSCCSCCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHH-HHHHH
T ss_pred             EEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHH-HHHHH
Confidence            9999999764322   45689999999999999999999999999987654221  111111111223455444 45777


Q ss_pred             HHHHHh-cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCC
Q 044905          159 FLQKVI-ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAP  237 (427)
Q Consensus       159 ~l~~l~-~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~  237 (427)
                      ++..+. +.|++++++|||.+.+. + .        ...  ....+++++|+|++++.++.++ ...+.++++.++...+
T Consensus       145 ~~~~~~~~~gi~~~~lrp~~v~~~-~-~--------~~~--~~~~~~~~~dva~~~~~~~~~~-~~~~~~~~~~~~~~~~  211 (267)
T 3ay3_A          145 LASLYYHKFDIETLNIRIGSCFPK-P-K--------DAR--MMATWLSVDDFMRLMKRAFVAP-KLGCTVVYGASANTES  211 (267)
T ss_dssp             HHHHHHHTTCCCEEEEEECBCSSS-C-C--------SHH--HHHHBCCHHHHHHHHHHHHHSS-CCCEEEEEECCSCSSC
T ss_pred             HHHHHHHHcCCCEEEEeceeecCC-C-C--------CCC--eeeccccHHHHHHHHHHHHhCC-CCCceeEecCCCcccc
Confidence            776654 67999999999854211 1 0        001  1125899999999999999764 2335788888776444


Q ss_pred             hhhHHHH
Q 044905          238 ARRVDEL  244 (427)
Q Consensus       238 ~~s~~el  244 (427)
                      ...+..+
T Consensus       212 ~~d~~~~  218 (267)
T 3ay3_A          212 WWDNDKS  218 (267)
T ss_dssp             CBCCGGG
T ss_pred             ccCHHHH
Confidence            4443333

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.88  E-value=2.1e-22  Score=196.89  Aligned_cols=232  Identities=16%  Similarity=0.198  Sum_probs=149.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-Ccch---HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGA---AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~---~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++|||||||||||++|++.|+++|++|++++| ++..   ...+....        ....++.++.+|++|.+++.++++
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~   73 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLP--------GASEKLHFFNADLSNPDSFAAAIE   73 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTST--------THHHHEEECCCCTTCGGGGHHHHT
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhh--------ccCCceEEEecCCCCHHHHHHHHc
Confidence            68999999999999999999999999999998 6532   12221100        001245688999999999999999


Q ss_pred             CcCEEEEccCCCCC---CC---CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccCC--CCCCCC---c-c----
Q 044905           81 NAGKVVVTIGPTED---GP---TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTYN--VLDGIS---S-F----  143 (427)
Q Consensus        81 g~d~Vi~~ag~~~~---~~---~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~~--~~~~~~---~-~----  143 (427)
                      ++|+|||++++...   ++   .+++|+.++.+++++|.+. ++++||++||.+.+.+....  ..++..   . +    
T Consensus        74 ~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  153 (322)
T 2p4h_X           74 GCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSV  153 (322)
T ss_dssp             TCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHH
T ss_pred             CCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhccc
Confidence            99999999976421   11   4578899999999999998 79999999998743221110  111100   0 0    


Q ss_pred             -chh-hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCccceE------Eecccc--cCCCCCcccHHHHHH
Q 044905          144 -FNN-LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESSYNVV------VSAEAS--VDANDYKVAKSQIAS  211 (427)
Q Consensus       144 -~~~-~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~i~------~~~~~~--~~~~~~~i~v~DVA~  211 (427)
                       ... .|+.+| ...|.++..+. ..|++++++||+ .+++..........      ..+...  .....+++|++|+|+
T Consensus       154 ~p~~~~Y~~sK-~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~  232 (322)
T 2p4h_X          154 KPFGWNYAVSK-TLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVAR  232 (322)
T ss_dssp             CCTTHHHHHHH-HHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHH
T ss_pred             CcccccHHHHH-HHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHH
Confidence             011 355544 45676665554 479999999997 33332211110000      011100  001125899999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +++.++.++ ...| .|+ +++.   ..++.|++..+.+.
T Consensus       233 a~~~~~~~~-~~~g-~~~-~~~~---~~s~~e~~~~i~~~  266 (322)
T 2p4h_X          233 AHIYLLENS-VPGG-RYN-CSPF---IVPIEEMSQLLSAK  266 (322)
T ss_dssp             HHHHHHHSC-CCCE-EEE-CCCE---EEEHHHHHHHHHHH
T ss_pred             HHHHHhhCc-CCCC-CEE-EcCC---CCCHHHHHHHHHHh
Confidence            999998754 2334 477 4444   56788888877543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.88  E-value=2.9e-22  Score=194.85  Aligned_cols=217  Identities=19%  Similarity=0.265  Sum_probs=146.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch------HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA------AQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~------~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |++|+||||||++|++|++.|+++|++|++++|+.+.      ...+...          ...+++++.+|++|++++.+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l----------~~~~v~~v~~D~~d~~~l~~   73 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------KASGANIVHGSIDDHASLVE   73 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------HTTTCEEECCCTTCHHHHHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH----------HhCCCEEEEeccCCHHHHHH
Confidence            6789999999999999999999999999999998642      1112111          12356799999999999999


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhccccccH
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTV  156 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~  156 (427)
                      +++++|+|||+++...      +  .++.+++++|+++| ++|||+ |+.+   . ......+..+ ....| ..+ ...
T Consensus        74 ~~~~~d~vi~~a~~~~------~--~~~~~l~~aa~~~g~v~~~v~-S~~g---~-~~~~~~~~~p-~~~~y-~sK-~~~  137 (308)
T 1qyc_A           74 AVKNVDVVISTVGSLQ------I--ESQVNIIKAIKEVGTVKRFFP-SEFG---N-DVDNVHAVEP-AKSVF-EVK-AKV  137 (308)
T ss_dssp             HHHTCSEEEECCCGGG------S--GGGHHHHHHHHHHCCCSEEEC-SCCS---S-CTTSCCCCTT-HHHHH-HHH-HHH
T ss_pred             HHcCCCEEEECCcchh------h--hhHHHHHHHHHhcCCCceEee-cccc---c-CccccccCCc-chhHH-HHH-HHH
Confidence            9999999999998531      2  25689999999999 999973 3222   1 1111111111 12334 332 335


Q ss_pred             HHHHHHHhcCCCeEEEEeCC-CCCCCCCC---------CccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCc
Q 044905          157 PEFLQKVIETDVSYTFIKTS-LTEDFSPE---------SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENK  226 (427)
Q Consensus       157 E~~l~~l~~~gl~~tilRPG-~~~~~~~~---------~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~  226 (427)
                      |.++   .+.+++|+++||| +++++.+.         ....+...+.+  ....++++++|+|++++.++.++ ...++
T Consensus       138 e~~~---~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~~~~~~l~~~-~~~~~  211 (308)
T 1qyc_A          138 RRAI---EAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDG--NARVVFVKEEDIGTFTIKAVDDP-RTLNK  211 (308)
T ss_dssp             HHHH---HHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTS--CCEEEEECHHHHHHHHHTTSSCG-GGTTE
T ss_pred             HHHH---HhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCC--CceEEEecHHHHHHHHHHHHhCc-cccCe
Confidence            5444   3478999999997 32221110         01122222222  22346899999999999999865 34578


Q ss_pred             EEEEecC-CCCChhhHHHHHHHHHhccchh
Q 044905          227 VVKVFTD-PSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       227 ~~nI~~~-~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      .|++.++ .   ..++.|++..+.+..++.
T Consensus       212 ~~~~~g~~~---~~s~~e~~~~~~~~~g~~  238 (308)
T 1qyc_A          212 TLYLRLPAN---TLSLNELVALWEKKIDKT  238 (308)
T ss_dssp             EEECCCGGG---EEEHHHHHHHHHHHTTSC
T ss_pred             EEEEeCCCC---ccCHHHHHHHHHHHhCCC
Confidence            8888753 4   578888888888765544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.88  E-value=3.3e-22  Score=193.20  Aligned_cols=208  Identities=13%  Similarity=0.114  Sum_probs=149.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ...++|||||||||||++|++.|+++|++|++++|+.                            +|++|.+++.++++ 
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------~Dl~d~~~~~~~~~~   61 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNE   61 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHH
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------------CCCCCHHHHHHHHHh
Confidence            3567899999999999999999999999999999861                            58999999999998 


Q ss_pred             -CcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhcc
Q 044905           81 -NAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRN  151 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~  151 (427)
                       ++|+|||++|....     +  ..+++|+.++.+++++|...++ +|||+||.++|+.....+. +..+....+.|+..
T Consensus        62 ~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~s  140 (292)
T 1vl0_A           62 KKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKT  140 (292)
T ss_dssp             HCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHH
T ss_pred             cCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHH
Confidence             89999999997542     1  1467888899999999999998 9999999988765432221 11111222455555


Q ss_pred             ccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCcc----------ceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          152 QPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPESSY----------NVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       152 ~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~----------~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      + ...|.++..+   +.+++++||+ +++. ......          .+...+  .  ...++++++|+|++++.++.++
T Consensus       141 K-~~~E~~~~~~---~~~~~~lR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          141 K-LEGENFVKAL---NPKYYIVRTAWLYGD-GNNFVKTMINLGKTHDELKVVH--D--QVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             H-HHHHHHHHHH---CSSEEEEEECSEESS-SSCHHHHHHHHHHHCSEEEEES--S--CEECCEEHHHHHHHHHHHHHHT
T ss_pred             H-HHHHHHHHhh---CCCeEEEeeeeeeCC-CcChHHHHHHHHhcCCcEEeec--C--eeeCCccHHHHHHHHHHHHhcC
Confidence            4 4567666553   4579999997 3432 111100          111111  1  2236899999999999998753


Q ss_pred             ccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          221 AVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       221 ~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                         .+++||++++.   ..++.|++..+.+..+
T Consensus       212 ---~~~~~~i~~~~---~~s~~e~~~~i~~~~g  238 (292)
T 1vl0_A          212 ---NYGTFHCTCKG---ICSWYDFAVEIFRLTG  238 (292)
T ss_dssp             ---CCEEEECCCBS---CEEHHHHHHHHHHHHC
T ss_pred             ---CCcEEEecCCC---CccHHHHHHHHHHHhC
Confidence               58999999987   5677777777766444

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.87  E-value=1.4e-22  Score=212.79  Aligned_cols=223  Identities=11%  Similarity=-0.000  Sum_probs=149.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +|+|||||||||||++|++.|+++|++|++++|+..+.        .             .+.+|+.|.  +..++.++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------~-------------~v~~d~~~~--~~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------G-------------KRFWDPLNP--ASDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------T-------------CEECCTTSC--CTTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------c-------------ceeecccch--hHHhcCCCC
Confidence            78999999999999999999999999999999997642        1             467787653  456788999


Q ss_pred             EEEEccCCCCCCC--------CccccHHHHHHHHHH-HHHcCCCeEEEEecccccc-cccCCCCCCCCccchhhhhcccc
Q 044905           84 KVVVTIGPTEDGP--------TSEVSTSDAFQVIQA-AQLAGVGHVAIIYDGNTTA-ASTYNVLDGISSFFNNLFSRNQP  153 (427)
Q Consensus        84 ~Vi~~ag~~~~~~--------~~~vn~~~~~~ll~A-a~~~gVk~~V~vSSs~v~~-~~~~~~~~~~~~~~~~~~~k~~~  153 (427)
                      +|||+++....+.        ..++|+.++.+++++ ++..++++|||+||+++|+ ...........+...+.|++.+ 
T Consensus       204 ~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~-  282 (516)
T 3oh8_A          204 VLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVC-  282 (516)
T ss_dssp             EEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHH-
T ss_pred             EEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHH-
Confidence            9999999753211        456799999999999 6777899999999999876 2222121221222233444332 


Q ss_pred             ccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCccce---EEec----ccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          154 LTVPEFLQKVIETDVSYTFIKTS-LTEDFSPESSYNV---VVSA----EASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       154 l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~~i---~~~~----~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      ..+|.++..+...|++++++||| +++.. ......+   ...+    .+......++||++|+|++++.++.++.  .+
T Consensus       283 ~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~-~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~  359 (516)
T 3oh8_A          283 RDWEHATAPASDAGKRVAFIRTGVALSGR-GGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ--IS  359 (516)
T ss_dssp             HHHHHTTHHHHHTTCEEEEEEECEEEBTT-BSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT--CC
T ss_pred             HHHHHHHHHHHhCCCCEEEEEeeEEECCC-CChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc--cC
Confidence            23455555555789999999997 44322 1100000   0000    0111122368999999999999998653  46


Q ss_pred             cEEEEecCCCCChhhHHHHHHHHHhccchhh
Q 044905          226 KVVKVFTDPSAPARRVDELFSAIAEDGRRAA  256 (427)
Q Consensus       226 ~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~  256 (427)
                      ++||++++.   ..++.|++..+.+..++..
T Consensus       360 g~~ni~~~~---~~s~~el~~~i~~~~g~~~  387 (516)
T 3oh8_A          360 GPINAVAPN---PVSNADMTKILATSMHRPA  387 (516)
T ss_dssp             EEEEESCSC---CEEHHHHHHHTTC------
T ss_pred             CcEEEECCC---CCCHHHHHHHHHHHhCCCC
Confidence            789999987   6788888888877655543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.87  E-value=9e-22  Score=192.88  Aligned_cols=218  Identities=13%  Similarity=0.181  Sum_probs=146.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-c-----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-G-----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~-----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      .||+|+||||||++|++|++.|+++|++|++++|++ +     +...+...          ...+++++.+|++|++++.
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~----------~~~~v~~v~~D~~d~~~l~   72 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEF----------RSMGVTIIEGEMEEHEKMV   72 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHH----------HHTTCEEEECCTTCHHHHH
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHh----------hcCCcEEEEecCCCHHHHH
Confidence            467899999999999999999999999999999987 2     22222111          1234569999999999999


Q ss_pred             HHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhcccccc
Q 044905           77 KAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~  155 (427)
                      ++++++|+|||+++...      +  .++.+++++|+++| ++|||  +|+.  +. ......+.. .....| ..+ ..
T Consensus        73 ~a~~~~d~vi~~a~~~~------~--~~~~~l~~aa~~~g~v~~~v--~S~~--g~-~~~~~~~~~-p~~~~y-~sK-~~  136 (321)
T 3c1o_A           73 SVLKQVDIVISALPFPM------I--SSQIHIINAIKAAGNIKRFL--PSDF--GC-EEDRIKPLP-PFESVL-EKK-RI  136 (321)
T ss_dssp             HHHTTCSEEEECCCGGG------S--GGGHHHHHHHHHHCCCCEEE--CSCC--SS-CGGGCCCCH-HHHHHH-HHH-HH
T ss_pred             HHHcCCCEEEECCCccc------h--hhHHHHHHHHHHhCCccEEe--cccc--cc-CccccccCC-CcchHH-HHH-HH
Confidence            99999999999998632      2  26689999999999 99998  3321  21 111111111 112334 332 33


Q ss_pred             HHHHHHHHhcCCCeEEEEeCC-CCCCCCC---------CCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccC
Q 044905          156 VPEFLQKVIETDVSYTFIKTS-LTEDFSP---------ESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN  225 (427)
Q Consensus       156 ~E~~l~~l~~~gl~~tilRPG-~~~~~~~---------~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g  225 (427)
                      .|.+++   +.+++|++|||| +++++.+         .....+...+.+  ....++++++|+|++++.++.++ ...|
T Consensus       137 ~e~~~~---~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~~~~~~l~~~-~~~g  210 (321)
T 3c1o_A          137 IRRAIE---AAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTG--ETKFVLNYEEDIAKYTIKVACDP-RCCN  210 (321)
T ss_dssp             HHHHHH---HHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTS--CCEEEEECHHHHHHHHHHHHHCG-GGTT
T ss_pred             HHHHHH---HcCCCeEEEEeceeccccccccccccccccccCceEEecCC--CcceeEeeHHHHHHHHHHHHhCc-cccC
Confidence            555443   578999999998 3332110         001122222222  22346899999999999999865 3468


Q ss_pred             cEEEEecC-CCCChhhHHHHHHHHHhccchh
Q 044905          226 KVVKVFTD-PSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       226 ~~~nI~~~-~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      +.|++.++ +   ..++.|++..+.+..++.
T Consensus       211 ~~~~~~g~~~---~~t~~e~~~~~~~~~g~~  238 (321)
T 3c1o_A          211 RIVIYRPPKN---IISQNELISLWEAKSGLS  238 (321)
T ss_dssp             EEEECCCGGG---EEEHHHHHHHHHHHHTSC
T ss_pred             eEEEEeCCCC---cccHHHHHHHHHHHcCCc
Confidence            88888753 4   578888888887765544

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.87  E-value=5.9e-22  Score=194.09  Aligned_cols=216  Identities=15%  Similarity=0.213  Sum_probs=145.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ++|+||||||++|++|++.|+++|++|++++|+++ +...+....          ..+++++.+|+.|++++.++++++|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~----------~~~v~~v~~Dl~d~~~l~~a~~~~d   81 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ----------SLGAIIVKGELDEHEKLVELMKKVD   81 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH----------HTTCEEEECCTTCHHHHHHHHTTCS
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh----------cCCCEEEEecCCCHHHHHHHHcCCC
Confidence            48999999999999999999999999999999985 333221110          1245699999999999999999999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      +|||+++...      +  .++.+++++|+++| ++|||+  |+  ++. ......+.. .....| ..+ ...|+++  
T Consensus        82 ~vi~~a~~~~------~--~~~~~l~~aa~~~g~v~~~v~--S~--~g~-~~~~~~~~~-p~~~~y-~sK-~~~e~~~--  143 (318)
T 2r6j_A           82 VVISALAFPQ------I--LDQFKILEAIKVAGNIKRFLP--SD--FGV-EEDRINALP-PFEALI-ERK-RMIRRAI--  143 (318)
T ss_dssp             EEEECCCGGG------S--TTHHHHHHHHHHHCCCCEEEC--SC--CSS-CTTTCCCCH-HHHHHH-HHH-HHHHHHH--
T ss_pred             EEEECCchhh------h--HHHHHHHHHHHhcCCCCEEEe--ec--ccc-CcccccCCC-CcchhH-HHH-HHHHHHH--
Confidence            9999998531      2  26789999999998 999983  32  121 111111111 112334 332 3355444  


Q ss_pred             HhcCCCeEEEEeCC-CCCCCCC----C--CccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecC-C
Q 044905          163 VIETDVSYTFIKTS-LTEDFSP----E--SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTD-P  234 (427)
Q Consensus       163 l~~~gl~~tilRPG-~~~~~~~----~--~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~-~  234 (427)
                       .+.+++|+++||| +++++.+    .  ....+...+.+  ....++++++|+|++++.++.++ ...++.|++.++ .
T Consensus       144 -~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~Dva~~~~~~l~~~-~~~~~~~~~~g~~~  219 (318)
T 2r6j_A          144 -EEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTG--EAKFAMNYEQDIGLYTIKVATDP-RALNRVVIYRPSTN  219 (318)
T ss_dssp             -HHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTS--CCEEEEECHHHHHHHHHHHTTCG-GGTTEEEECCCGGG
T ss_pred             -HhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCC--CceeeEeeHHHHHHHHHHHhcCc-cccCeEEEecCCCC
Confidence             4589999999998 3332111    0  01122222222  22346899999999999999865 345788888753 4


Q ss_pred             CCChhhHHHHHHHHHhccchh
Q 044905          235 SAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       235 ~~~~~s~~ell~~i~~~~~~~  255 (427)
                         ..++.|+++.+.+..++.
T Consensus       220 ---~~s~~e~~~~~~~~~g~~  237 (318)
T 2r6j_A          220 ---IITQLELISRWEKKIGKK  237 (318)
T ss_dssp             ---EEEHHHHHHHHHHHHTCC
T ss_pred             ---ccCHHHHHHHHHHHhCCC
Confidence               577888888887765543

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.87  E-value=7.6e-22  Score=212.90  Aligned_cols=231  Identities=10%  Similarity=0.098  Sum_probs=159.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH-HHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAES-IAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s-l~~al~   80 (427)
                      .+|+|||||||||||++|++.|+++ |++|++++|+......+.            ...++.++.+|++|.++ +..+++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~------------~~~~v~~v~~Dl~d~~~~~~~~~~  381 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------NHPHFHFVEGDISIHSEWIEYHVK  381 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT------------TCTTEEEEECCTTTCHHHHHHHHH
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc------------cCCceEEEECCCCCcHHHHHHhhc
Confidence            4678999999999999999999998 899999999876432221            12356789999999765 778899


Q ss_pred             CcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCc--------cch
Q 044905           81 NAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISS--------FFN  145 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~--------~~~  145 (427)
                      ++|+|||++|....     +  ..+++|+.++.+++++|...+ ++|||+||.++|+........+..+        ...
T Consensus       382 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~  460 (660)
T 1z7e_A          382 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPR  460 (660)
T ss_dssp             HCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTT
T ss_pred             CCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCC
Confidence            99999999997542     1  145678889999999999999 9999999998875533222111110        112


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC---------C-c----------cceEEecccccCCCCCc
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE---------S-S----------YNVVVSAEASVDANDYK  203 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~---------~-~----------~~i~~~~~~~~~~~~~~  203 (427)
                      +.|+.++ ...|.++..+. +.|++++++||| +++.....         . .          ..+...+.+.  ...++
T Consensus       461 ~~Y~~sK-~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~--~~~~~  537 (660)
T 1z7e_A          461 WIYSVSK-QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK--QKRCF  537 (660)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGC--CEEEC
T ss_pred             CCcHHHH-HHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCC--eEEEE
Confidence            3455554 56787776654 569999999997 33332210         0 0          0111111111  12369


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      +|++|+|++++.++.++.. ..+++||++++.  ...++.|++..+.+.
T Consensus       538 i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~--~~~s~~el~~~i~~~  584 (660)
T 1z7e_A          538 TDIRDGIEALYRIIENAGNRCDGEIINIGNPE--NEASIEELGEMLLAS  584 (660)
T ss_dssp             EEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG--GEEEHHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHhCccccCCCeEEEECCCC--CCcCHHHHHHHHHHH
Confidence            9999999999999876532 367899999873  025666776666544

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.86  E-value=1.7e-21  Score=211.27  Aligned_cols=240  Identities=10%  Similarity=0.105  Sum_probs=161.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .+|+|||||||||||++|++.|+++|++|++++|+.... ..+....       .....++.++.+|++|.+++.++++ 
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~-------~~~~~~v~~v~~Dl~d~~~l~~~~~~   82 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLE-------VLTKHHIPFYEVDLCDRKGLEKVFKE   82 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHH-------HHHTSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHh-------hccCCceEEEEcCCCCHHHHHHHHHh
Confidence            457899999999999999999999999999999976532 1111100       0012356789999999999999998 


Q ss_pred             -CcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-----CCCCCCCccchhh
Q 044905           81 -NAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-----NVLDGISSFFNNL  147 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-----~~~~~~~~~~~~~  147 (427)
                       ++|+|||+++.....       ..+++|+.++.+++++|++.++++||++||.++|+....     +..+..+....+.
T Consensus        83 ~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~  162 (699)
T 1z45_A           83 YKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNP  162 (699)
T ss_dssp             SCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSH
T ss_pred             CCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCCh
Confidence             899999999976421       145788999999999999999999999999988754321     1111111112235


Q ss_pred             hhccccccHHHHHHHHh-c--CCCeEEEEeCC-CCCCCCC-----------CCcc------------ceEEecc----cc
Q 044905          148 FSRNQPLTVPEFLQKVI-E--TDVSYTFIKTS-LTEDFSP-----------ESSY------------NVVVSAE----AS  196 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~--~gl~~tilRPG-~~~~~~~-----------~~~~------------~i~~~~~----~~  196 (427)
                      |+.++ ..+|.++..+. +  .+++++++||+ +++....           ....            .+.+.+.    ..
T Consensus       163 Y~~sK-~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  241 (699)
T 1z45_A          163 YGHTK-YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRD  241 (699)
T ss_dssp             HHHHH-HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CC
T ss_pred             HHHHH-HHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCC
Confidence            55554 56788777665 3  68999999985 2221100           0000            0111010    00


Q ss_pred             cCCCCCcccHHHHHHHHHHHhcCcc-----cccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          197 VDANDYKVAKSQIASLVADVFSNTA-----VAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       197 ~~~~~~~i~v~DVA~~v~~al~~~~-----~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      .....++||++|+|++++.++....     ...+++||++++.   ..++.|++..+.+..+
T Consensus       242 g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~---~~s~~el~~~i~~~~g  300 (699)
T 1z45_A          242 GTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK---GSTVFEVYHAFCKASG  300 (699)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC---CEEHHHHHHHHHHHHT
T ss_pred             CCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCC---CCcHHHHHHHHHHHhC
Confidence            1112368999999999998886321     1235799999987   5677777777766544

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.86  E-value=7.1e-22  Score=197.83  Aligned_cols=199  Identities=14%  Similarity=0.087  Sum_probs=144.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |+|||||||||+|++|++.|+++|+ +|++++|+                                .|.+++.++++++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------~d~~~l~~~~~~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------TKEEELESALLKAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------CCHHHHHHHHHHCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CCHHHHHHHhccCC
Confidence            6899999999999999999999998 66665553                                56778888899999


Q ss_pred             EEEEccCCCCCC---CCccccHHHHHHHHHHHHHcCCC-eEEEEecccccccccCCCCCCCCccchhhhhccccccHHHH
Q 044905           84 KVVVTIGPTEDG---PTSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEF  159 (427)
Q Consensus        84 ~Vi~~ag~~~~~---~~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~  159 (427)
                      +|||+++.....   ...++|+.++.+++++|+++|++ +|||+||.+++.              .+.|+..+ ...|.+
T Consensus        49 ~Vih~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~--------------~~~Y~~sK-~~~E~~  113 (369)
T 3st7_A           49 FIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ--------------DNPYGESK-LQGEQL  113 (369)
T ss_dssp             EEEECCCSBCTTCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS--------------CSHHHHHH-HHHHHH
T ss_pred             EEEECCcCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC--------------CCCchHHH-HHHHHH
Confidence            999999875432   25677888999999999999988 999999988654              12344443 457877


Q ss_pred             HHHHh-cCCCeEEEEeCC-CCCCCCCCCccce-------EEec-c---cccCCCCCcccHHHHHHHHHHHhcCcccccCc
Q 044905          160 LQKVI-ETDVSYTFIKTS-LTEDFSPESSYNV-------VVSA-E---ASVDANDYKVAKSQIASLVADVFSNTAVAENK  226 (427)
Q Consensus       160 l~~l~-~~gl~~tilRPG-~~~~~~~~~~~~i-------~~~~-~---~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~  226 (427)
                      +..+. +.|++++++||+ +++....+....+       ...+ .   .......+++|++|+|++++.++.++....++
T Consensus       114 ~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~  193 (369)
T 3st7_A          114 LREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENG  193 (369)
T ss_dssp             HHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETT
T ss_pred             HHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCc
Confidence            77665 469999999997 4443222110000       0001 0   01122236899999999999999865332389


Q ss_pred             EEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          227 VVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       227 ~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      +||++++.   ..++.|++..+.+..+
T Consensus       194 ~~~i~~~~---~~s~~e~~~~~~~~~g  217 (369)
T 3st7_A          194 VPTVPNVF---KVTLGEIVDLLYKFKQ  217 (369)
T ss_dssp             EECCSCCE---EEEHHHHHHHHHHHHH
T ss_pred             eEEeCCCC---ceeHHHHHHHHHHHhC
Confidence            99999887   6778888888766544

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=7.7e-22  Score=194.87  Aligned_cols=233  Identities=9%  Similarity=0.021  Sum_probs=160.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG-------FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAES   74 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G-------~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s   74 (427)
                      +.+|+|||||||||||++|++.|+++|       ++|++++|+.......             ...++.++.+|++|.++
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~-------------~~~~~~~~~~Dl~d~~~   78 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG-------------FSGAVDARAADLSAPGE   78 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT-------------CCSEEEEEECCTTSTTH
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc-------------cCCceeEEEcCCCCHHH
Confidence            456789999999999999999999999       8999999986532110             12356689999999999


Q ss_pred             HHHHh-cCcCEEEEccCCCCC----CC--CccccHHHHHHHHHHHHHcC-----CCeEEEEecccccccccCCC-CCCCC
Q 044905           75 IAKAI-GNAGKVVVTIGPTED----GP--TSEVSTSDAFQVIQAAQLAG-----VGHVAIIYDGNTTAASTYNV-LDGIS  141 (427)
Q Consensus        75 l~~al-~g~d~Vi~~ag~~~~----~~--~~~vn~~~~~~ll~Aa~~~g-----Vk~~V~vSSs~v~~~~~~~~-~~~~~  141 (427)
                      +.+++ .++|+|||++|....    ++  .+++|+.++.+++++|...+     +++||++||.++|+.....+ .+..+
T Consensus        79 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~  158 (342)
T 2hrz_A           79 AEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFH  158 (342)
T ss_dssp             HHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCC
T ss_pred             HHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCC
Confidence            99999 489999999997531    11  45788899999999999887     89999999998876532211 12212


Q ss_pred             ccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCC-CCCC--C---Ccc----------ceEEecccccCCCCCc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTE-DFSP--E---SSY----------NVVVSAEASVDANDYK  203 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~-~~~~--~---~~~----------~i~~~~~~~~~~~~~~  203 (427)
                      ....+.|+.++ ...|.++..+. +.+++++++|++ .+. ....  .   ...          .+.+....  ....++
T Consensus       159 ~~~~~~Y~~sK-~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  235 (342)
T 2hrz_A          159 TTPLTSYGTQK-AICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPE--SIRHWH  235 (342)
T ss_dssp             CCCSSHHHHHH-HHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCT--TCEEEE
T ss_pred             CCCcchHHHHH-HHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCC--ccceee
Confidence            11224555554 56787777665 457999999964 221 1110  0   000          01111111  112257


Q ss_pred             ccHHHHHHHHHHHhcCccc--ccCcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          204 VAKSQIASLVADVFSNTAV--AENKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~--~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +|++|+|++++.++..+..  ..+++||+++ .   ..++.|++..+.+..+.
T Consensus       236 ~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g-~---~~s~~e~~~~i~~~~g~  284 (342)
T 2hrz_A          236 ASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG-L---SATVGEQIEALRKVAGE  284 (342)
T ss_dssp             ECHHHHHHHHHHHHHSCHHHHCSCCEEECCC-E---EEEHHHHHHHHHHHHCH
T ss_pred             EehHHHHHHHHHHHhccccccCCccEEEcCC-C---CCCHHHHHHHHHHHcCc
Confidence            8999999999999875422  2478999964 3   47788888888765443

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=3.6e-22  Score=183.98  Aligned_cols=193  Identities=17%  Similarity=0.104  Sum_probs=137.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++|+|+||||||++|++|++.|+++|+  +|++++|++..    .             ..+++++.+|++|.+++.+++ 
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~-------------~~~~~~~~~D~~~~~~~~~~~-   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----E-------------HPRLDNPVGPLAELLPQLDGS-   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----C-------------CTTEECCBSCHHHHGGGCCSC-
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----c-------------CCCceEEeccccCHHHHHHhh-
Confidence            346899999999999999999999998  99999998764    0             124457889999998888887 


Q ss_pred             CcCEEEEccCCCCC-----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccccc
Q 044905           81 NAGKVVVTIGPTED-----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~  155 (427)
                       +|+|||++|....     ....++|+.++.+++++|.+.++++||++||.+++..       +.     ..|+..+ ..
T Consensus        66 -~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------~~-----~~y~~sK-~~  131 (215)
T 2a35_A           66 -IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------SS-----IFYNRVK-GE  131 (215)
T ss_dssp             -CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------CS-----SHHHHHH-HH
T ss_pred             -hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------Cc-----cHHHHHH-HH
Confidence             9999999997542     1145678889999999999999999999999886431       11     2344332 23


Q ss_pred             HHHHHHHHhcCCCe-EEEEeCCC-CCCCCCCC-ccceEEecccc-cCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEe
Q 044905          156 VPEFLQKVIETDVS-YTFIKTSL-TEDFSPES-SYNVVVSAEAS-VDANDYKVAKSQIASLVADVFSNTAVAENKVVKVF  231 (427)
Q Consensus       156 ~E~~l~~l~~~gl~-~tilRPG~-~~~~~~~~-~~~i~~~~~~~-~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~  231 (427)
                      .|.+   +...+++ ++++|||. +++..... ...+. ..... .....++++++|+|++++.++.++   .+++|+++
T Consensus       132 ~e~~---~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~---~~~~~~i~  204 (215)
T 2a35_A          132 LEQA---LQEQGWPQLTIARPSLLFGPREEFRLAEILA-APIARILPGKYHGIEACDLARALWRLALEE---GKGVRFVE  204 (215)
T ss_dssp             HHHH---HTTSCCSEEEEEECCSEESTTSCEEGGGGTT-CCCC----CHHHHHHHHHHHHHHHHHHTCC---CSEEEEEE
T ss_pred             HHHH---HHHcCCCeEEEEeCceeeCCCCcchHHHHHH-HhhhhccCCCcCcEeHHHHHHHHHHHHhcC---CCCceEEc
Confidence            4433   3457999 99999984 33321100 00000 00000 001235899999999999999865   27899999


Q ss_pred             cCC
Q 044905          232 TDP  234 (427)
Q Consensus       232 ~~~  234 (427)
                      +++
T Consensus       205 ~~~  207 (215)
T 2a35_A          205 SDE  207 (215)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            875

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.84  E-value=1.5e-21  Score=183.47  Aligned_cols=201  Identities=15%  Similarity=0.171  Sum_probs=138.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |..|+|+||||||+||++|++.|+++|+  +|++++|++.....+.             ..++.++.+|++|.+++.+++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------------~~~~~~~~~D~~d~~~~~~~~   82 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------------YKNVNQEVVDFEKLDDYASAF   82 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------------GGGCEEEECCGGGGGGGGGGG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------------cCCceEEecCcCCHHHHHHHh
Confidence            3457999999999999999999999999  9999999986532211             124568999999999999999


Q ss_pred             cCcCEEEEccCCCCCC----CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccccc
Q 044905           80 GNAGKVVVTIGPTEDG----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~  155 (427)
                      +++|+|||++|.....    ...++|+.++.+++++|++.++++||++||.+++..       +.     ..|+..+ ..
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------~~-----~~Y~~sK-~~  149 (242)
T 2bka_A           83 QGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------SN-----FLYLQVK-GE  149 (242)
T ss_dssp             SSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------CS-----SHHHHHH-HH
T ss_pred             cCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------Cc-----chHHHHH-HH
Confidence            9999999999975321    145678889999999999999999999999876431       11     1233332 23


Q ss_pred             HHHHHHHHhcCCC-eEEEEeCCCC-CCCCCCCccceEEe---cccc-cCCCCCcccHHHHHHHHHHHhcCcccccCcEEE
Q 044905          156 VPEFLQKVIETDV-SYTFIKTSLT-EDFSPESSYNVVVS---AEAS-VDANDYKVAKSQIASLVADVFSNTAVAENKVVK  229 (427)
Q Consensus       156 ~E~~l~~l~~~gl-~~tilRPG~~-~~~~~~~~~~i~~~---~~~~-~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~n  229 (427)
                      .|.++   ...++ ++++||||.+ ++............   .... ......+++++|+|++++.++.++.  ..+.+.
T Consensus       150 ~e~~~---~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~--~~~~~~  224 (242)
T 2bka_A          150 VEAKV---EELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQMEL  224 (242)
T ss_dssp             HHHHH---HTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEE
T ss_pred             HHHHH---HhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc--ccCeeE
Confidence            45443   45688 6999999843 33211100000000   0000 0011248999999999999998642  335555


Q ss_pred             EecC
Q 044905          230 VFTD  233 (427)
Q Consensus       230 I~~~  233 (427)
                      +.++
T Consensus       225 ~~~~  228 (242)
T 2bka_A          225 LENK  228 (242)
T ss_dssp             EEHH
T ss_pred             eeHH
Confidence            5443

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.83  E-value=2.9e-20  Score=177.38  Aligned_cols=207  Identities=13%  Similarity=0.097  Sum_probs=145.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--A   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--~   82 (427)
                      |+|+||||||+||++|++.|+ +|++|++++|++...        .            . +.+|++|.+++.+++++  +
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~--------~------------~-~~~Dl~~~~~~~~~~~~~~~   58 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ--------G------------G-YKLDLTDFPRLEDFIIKKRP   58 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT--------T------------C-EECCTTSHHHHHHHHHHHCC
T ss_pred             CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC--------C------------C-ceeccCCHHHHHHHHHhcCC
Confidence            489999999999999999999 599999999987420        1            1 78999999999999986  9


Q ss_pred             CEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccccc
Q 044905           83 GKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        83 d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~  155 (427)
                      |+|||++|....+       ..+++|+.++.+++++|...++ +||++||.++|.+...+..+..+....+.|+..+ ..
T Consensus        59 d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK-~~  136 (273)
T 2ggs_A           59 DVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSK-LL  136 (273)
T ss_dssp             SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHH-HH
T ss_pred             CEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHH-HH
Confidence            9999999976421       1456788899999999999887 9999999988755432222221222224555443 23


Q ss_pred             HHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCcc----------ceEEecccccCCCCCcccHHHHHHHHHHHhcCccccc
Q 044905          156 VPEFLQKVIETDVSYTFIKTS-LTEDFSPESSY----------NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAE  224 (427)
Q Consensus       156 ~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~----------~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~  224 (427)
                      .|.++    .. ++++++||+ ++++  .....          .+...+.     ..++++++|+|++++.++.++   .
T Consensus       137 ~e~~~----~~-~~~~~iR~~~v~G~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~~i~~~~~~~---~  201 (273)
T 2ggs_A          137 GETFA----LQ-DDSLIIRTSGIFRN--KGFPIYVYKTLKEGKTVFAFKG-----YYSPISARKLASAILELLELR---K  201 (273)
T ss_dssp             HHHHH----CC-TTCEEEEECCCBSS--SSHHHHHHHHHHTTCCEEEESC-----EECCCBHHHHHHHHHHHHHHT---C
T ss_pred             HHHHH----hC-CCeEEEeccccccc--cHHHHHHHHHHHcCCCEEeecC-----CCCceEHHHHHHHHHHHHhcC---c
Confidence            44333    23 889999997 4431  11000          1111111     236899999999999998753   2


Q ss_pred             CcEEEEecCCCCChhhHHHHHHHHHhccch
Q 044905          225 NKVVKVFTDPSAPARRVDELFSAIAEDGRR  254 (427)
Q Consensus       225 g~~~nI~~~~~~~~~s~~ell~~i~~~~~~  254 (427)
                      +++||+++ .   ..++.|++..+.+..+.
T Consensus       202 ~g~~~i~~-~---~~s~~e~~~~~~~~~g~  227 (273)
T 2ggs_A          202 TGIIHVAG-E---RISRFELALKIKEKFNL  227 (273)
T ss_dssp             CEEEECCC-C---CEEHHHHHHHHHHHTTC
T ss_pred             CCeEEECC-C---cccHHHHHHHHHHHhCC
Confidence            56999998 6   56777888777665443

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.81  E-value=2.8e-19  Score=169.15  Aligned_cols=215  Identities=14%  Similarity=0.100  Sum_probs=143.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+......+......       ...++.++.+|++|.+++.++++ 
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   81 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-------LGGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-------hCCceEEEEcCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999998765444322111       02356689999999999988876 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            ++|+|||++|.....+          .+++|+.++.++++++.    +.+.++||++||.+.+...     .+.
T Consensus        82 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~  156 (255)
T 1fmc_A           82 AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----INM  156 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----TTC
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----CCC
Confidence                  8999999999754321          34578888888888774    4578899999987643211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCC-CCCc-cceEEe-cccccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFS-PESS-YNVVVS-AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~-~~~~-~~i~~~-~~~~~~~~~~~i~v~DVA~~v  213 (427)
                           ..|+.++ .+.+.+.+.+.    ..|++++++|||++.... .... ...... ....+..  .+++++|+|+++
T Consensus       157 -----~~Y~~sK-~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~  228 (255)
T 1fmc_A          157 -----TSYASSK-AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR--RLGQPQDIANAA  228 (255)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC--SCBCHHHHHHHH
T ss_pred             -----cccHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcc--cCCCHHHHHHHH
Confidence                 1233322 23455554443    468999999999654311 0000 000000 0011111  378999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCCCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      +.++++... ..|++|++.++...
T Consensus       229 ~~l~~~~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          229 LFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             HHHhCCccccCCCcEEEECCceec
Confidence            999875333 35789999988643

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.81  E-value=1.1e-18  Score=168.28  Aligned_cols=219  Identities=13%  Similarity=0.122  Sum_probs=145.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .+++|+||||+|+||+++++.|+++|++|++++|+.+....+....          ..++.++.+|++|.+++.++++  
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~~~~~~~~~   73 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----------PDRAEAISLDVTDGERIDVVAADV   73 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----------TTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------cCCceEEEeeCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999988766554321          2356789999999999888876  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHH----HHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSD----AFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~----~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.+    +..++..+++.+.++||++||.+.+..     ..+.
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----~~~~  148 (281)
T 3m1a_A           74 LARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----FAGF  148 (281)
T ss_dssp             HHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----CTTC
T ss_pred             HHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----CCCc
Confidence                 7899999999653321           45678888    455555557778889999998763211     1111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecc--------------cccCCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAE--------------ASVDANDY  202 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~--------------~~~~~~~~  202 (427)
                           ..|+.+| .+.+.+.+.+.    ..|+++++++||.+.......... .....              ........
T Consensus       149 -----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (281)
T 3m1a_A          149 -----SAYSATK-AALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAA-YFSEENPAYAEKVGPTRQLVQGSDGSQ  221 (281)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCE-EECCBCTTTHHHHHHHHHHHHC-----
T ss_pred             -----hHHHHHH-HHHHHHHHHHHHHhhccCcEEEEEecCcccccccccccc-ccCCcchhhHHHhHHHHHHHhhccCCC
Confidence                 2333333 33555555443    468999999999554321110000 00000              00111224


Q ss_pred             cccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHH
Q 044905          203 KVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i  248 (427)
                      +.+++|+|++++.+++++  ..+..|+++++.   ...+.+.+..+
T Consensus       222 ~~~~~dva~a~~~~~~~~--~~~~~~~l~s~~---~~~i~g~~~~i  262 (281)
T 3m1a_A          222 PGDPAKAAAAIRLALDTE--KTPLRLALGGDA---VDFLTGHLDSV  262 (281)
T ss_dssp             CBCHHHHHHHHHHHHHSS--SCCSEEEESHHH---HHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhCC--CCCeEEecCchH---HHHHHHHHHHH
Confidence            789999999999999864  357789998875   44444444443

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.80  E-value=1.1e-18  Score=167.35  Aligned_cols=227  Identities=12%  Similarity=0.129  Sum_probs=150.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||++++++|+++|++|++++|+......+......        ..++.++.+|++|.+++.++++ 
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--------PDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--------CCceEEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999987654443221100        1256789999999999988876 


Q ss_pred             ------CcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCC
Q 044905           81 ------NAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                            ++|+|||++|....  .+           .+++|+.++.++++++..    .+.++||++||.+.+....    
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  161 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----  161 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----
Confidence                  79999999996532  11           456788888999888866    4678999999887533211    


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE---Eec--ccccCCCCCcccHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV---VSA--EASVDANDYKVAKSQ  208 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~---~~~--~~~~~~~~~~i~v~D  208 (427)
                      .+.     ..|+.++ .+.+.+.+.+.    ..|++++++|||.+............   ...  .........+++.+|
T Consensus       162 ~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (278)
T 2bgk_A          162 GVS-----HVYTATK-HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED  235 (278)
T ss_dssp             TSC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred             CCC-----cchHHHH-HHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHH
Confidence            011     1233222 23555555443    46899999999954332111110000   000  000011114789999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      +|++++.++.+... ..|..|++.++.   ..++.+++..+.
T Consensus       236 va~~~~~l~~~~~~~~~G~~~~v~gg~---~~~~~e~~~~i~  274 (278)
T 2bgk_A          236 VADAVAYLAGDESKYVSGLNLVIDGGY---TRTNPAFPTALK  274 (278)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG---GGCCTHHHHHSC
T ss_pred             HHHHHHHHcCcccccCCCCEEEECCcc---cccCCccchhhh
Confidence            99999999874322 358899999987   456666666653

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.79  E-value=2.5e-18  Score=163.68  Aligned_cols=222  Identities=20%  Similarity=0.133  Sum_probs=139.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.+....+................++.++.+|++|.+++.++++.
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            45578999999999999999999999999999999987655443211000000000013567899999999998888765


Q ss_pred             -------c-CEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCC
Q 044905           82 -------A-GKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        82 -------~-d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                             . |+|||++|.....+           .+++|+.++.++++++...    + .++||++||.....+.     
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  159 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN-----  159 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC-----
T ss_pred             HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC-----
Confidence                   3 99999999764321           4567888999998887653    4 5789999887532111     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .+.     ..|+.++ .+.+.+.+.+.    ..|++++++|||.+..........-.............+++.+|+|+++
T Consensus       160 ~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  233 (264)
T 2pd6_A          160 VGQ-----TNYAASK-AGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVV  233 (264)
T ss_dssp             TTB-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHH
T ss_pred             CCC-----hhhHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence            111     2233332 33455554443    4789999999995543211110000000000000111367999999999


Q ss_pred             HHHhcCcc-cccCcEEEEecCC
Q 044905          214 ADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      +.++.+.. ...|..+++.++.
T Consensus       234 ~~l~~~~~~~~~G~~~~v~gg~  255 (264)
T 2pd6_A          234 AFLASEDSGYITGTSVEVTGGL  255 (264)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHcCCcccCCCCCEEEECCCc
Confidence            99887432 2468899998885

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.79  E-value=1.2e-18  Score=164.12  Aligned_cols=213  Identities=20%  Similarity=0.136  Sum_probs=139.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.++.+.+......      ....++.++.+|++|.+++.++++ 
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~   78 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIAN------KYGVKAHGVEMNLLSEESINKAFEE   78 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH------HHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh------hcCCceEEEEccCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999997765544321110      002345689999999999988886 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++    ++.+.++||++||...+.+.     .+
T Consensus        79 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~  153 (248)
T 2pnf_A           79 IYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----VG  153 (248)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----TT
T ss_pred             HHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----CC
Confidence                  7999999999765322           4567777886665544    45678899999987532211     01


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.++ .+.+.+.+.+    ...++++++++||.+..............  ....+.  ..+++.+|+|+++
T Consensus       154 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~  225 (248)
T 2pnf_A          154 QV-----NYSTTK-AGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPL--GRFGSPEEVANVV  225 (248)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTT--SSCBCHHHHHHHH
T ss_pred             Cc-----hHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCC--CCccCHHHHHHHH
Confidence            11     222222 2344444443    34689999999996543211110000000  000111  1478999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.++..... ..|+.|++.++
T Consensus       226 ~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          226 LFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCchhhcCCCcEEEeCCC
Confidence            998875322 35889999876

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.79  E-value=2.5e-18  Score=164.14  Aligned_cols=212  Identities=13%  Similarity=0.126  Sum_probs=132.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+......+......       ...++.++.+|++|.+++.+++   
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   85 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-------KGFQVTGSVCDASLRPEREKLMQTV   85 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeeEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999997765444322111       0235668999999999888877   


Q ss_pred             -----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           80 -----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        80 -----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .++|+|||++|.....+           .+++|+.++.++++++    ++.+.++||++||.+.+.+.     .+
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~  160 (266)
T 1xq1_A           86 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----SV  160 (266)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------
T ss_pred             HHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----CC
Confidence                 57899999999654321           4568888999998888    45678999999987643211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ceEEec--ccccCCCCCcccHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NVVVSA--EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i~~~~--~~~~~~~~~~i~v~DVA~~  212 (427)
                      ..     .|+.++ ...+.+.+.+.    ..|++++++|||.+......... ......  ...+..  .+++.+|+|++
T Consensus       161 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  232 (266)
T 1xq1_A          161 GS-----IYSATK-GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLG--RFGEPEEVSSL  232 (266)
T ss_dssp             CC-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHH
T ss_pred             Cc-----hHHHHH-HHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCC--CCcCHHHHHHH
Confidence            11     233222 23455554443    46899999999955432111000 000000  001111  36799999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.+++.... ..|+.|++.++.
T Consensus       233 ~~~l~~~~~~~~~G~~~~v~gG~  255 (266)
T 1xq1_A          233 VAFLCMPAASYITGQTICVDGGL  255 (266)
T ss_dssp             HHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHcCccccCccCcEEEEcCCc
Confidence            9998874322 358889988874

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.79  E-value=3.4e-18  Score=164.57  Aligned_cols=227  Identities=11%  Similarity=0.081  Sum_probs=140.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.++.+.+.......    .....++.++.+|++|.+++.++++ 
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAA----GVSEQNVNSVVADVTTDAGQDEILST   79 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----ccCCCceeEEecccCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999987655443321000    0012356789999999999988876 


Q ss_pred             ------CcCEEEEccCCCCCCC---------------CccccHHHHHHHHHHHHHc----CCCeEEEEecccc-cccccC
Q 044905           81 ------NAGKVVVTIGPTEDGP---------------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNT-TAASTY  134 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~---------------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v-~~~~~~  134 (427)
                            ++|+|||++|.....+               .+++|+.++.++++++...    + ++||++||.+. +.+.  
T Consensus        80 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~--  156 (278)
T 1spx_A           80 TLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT--  156 (278)
T ss_dssp             HHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC--
T ss_pred             HHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC--
Confidence                  8999999999653221               3467777888888877653    6 89999998763 2110  


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cc-eEE-------ec--ccccCC
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YN-VVV-------SA--EASVDA  199 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~-i~~-------~~--~~~~~~  199 (427)
                         .+.     ..|+.+| .+.+.+.+.+.    ..|+++++|+||++........ .. -..       ..  ...+..
T Consensus       157 ---~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  227 (278)
T 1spx_A          157 ---PDF-----PYYSIAK-AAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG  227 (278)
T ss_dssp             ---TTS-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS
T ss_pred             ---CCc-----cHHHHHH-HHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCc
Confidence               111     1233222 23444444433    5689999999996543211100 00 000       00  001111


Q ss_pred             CCCcccHHHHHHHHHHHhcCccc--ccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          200 NDYKVAKSQIASLVADVFSNTAV--AENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~--~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                        .+.+.+|||++++.+++.+..  ..|..|++.++.   ..++.++.+.+.
T Consensus       228 --~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~---~~~~~~~~~~~~  274 (278)
T 1spx_A          228 --VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS---SLIMGLHCQDFA  274 (278)
T ss_dssp             --SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG---GGC---------
T ss_pred             --CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCc---ccccCcccccHH
Confidence              378999999999998874332  358999999987   455566655553

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.79  E-value=3.1e-20  Score=175.24  Aligned_cols=210  Identities=11%  Similarity=0.063  Sum_probs=139.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      |++|+||||||+||++|++.|+++|++|++++|+++....                    .+.+|++|.+++.++++   
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------------~~~~D~~~~~~~~~~~~~~~   60 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------------DLSTPGGRETAVAAVLDRCG   60 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------------CTTSHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------------cccCCcccHHHHHHHHHHcC
Confidence            4689999999999999999999999999999998754210                    14578888888888886   


Q ss_pred             -CcCEEEEccCCCC-CCC---CccccHHHHHHHHHHHHHc----CCCeEEEEecccccccccCCCC--------CCC---
Q 044905           81 -NAGKVVVTIGPTE-DGP---TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNTTAASTYNVL--------DGI---  140 (427)
Q Consensus        81 -g~d~Vi~~ag~~~-~~~---~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v~~~~~~~~~--------~~~---  140 (427)
                       ++|+|||++|... ...   .+++|+.++.++++++...    +.++||++||.+.+........        +..   
T Consensus        61 ~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (255)
T 2dkn_A           61 GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAI  140 (255)
T ss_dssp             TCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHH
T ss_pred             CCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhh
Confidence             8999999999765 222   5678888999999987654    6789999999886543211000        000   


Q ss_pred             -----CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEEecccccC--CCCCcccHHH
Q 044905          141 -----SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVVSAEASVD--ANDYKVAKSQ  208 (427)
Q Consensus       141 -----~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~~~~~~~~--~~~~~i~v~D  208 (427)
                           .......|+.++ .+.+.+.+.+.    ..|++++++|||.+........ ............  ....+++++|
T Consensus       141 ~~~~~~~~~~~~Y~~sK-~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  219 (255)
T 2dkn_A          141 ELAEQQGQTHLAYAGSK-YAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPRE  219 (255)
T ss_dssp             HHHHHHCCHHHHHHHHH-HHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHH
T ss_pred             hhccccCCcchhHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCHHH
Confidence                 001223454444 44566665544    3689999999985533111000 000000000000  1125899999


Q ss_pred             HHHHHHHHhcCcc-cccCcEEEEecCC
Q 044905          209 IASLVADVFSNTA-VAENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~-~~~g~~~nI~~~~  234 (427)
                      +|++++.++.++. ...|+.|++.++.
T Consensus       220 va~~~~~l~~~~~~~~~G~~~~v~gg~  246 (255)
T 2dkn_A          220 VAEAIAFLLGPQASFIHGSVLFVDGGM  246 (255)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHhCCCcccceeeEEEecCCe
Confidence            9999999987542 2368899998885

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.78  E-value=2.3e-18  Score=162.28  Aligned_cols=213  Identities=12%  Similarity=0.099  Sum_probs=134.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||||+||+++++.|+++|++|+++ .|+......+......       ...++.++.+|++|.+++.++++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   75 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-------AGINVVVAKGDVKNPEDVENMVK   75 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH-------TTCCEEEEESCTTSHHHHHHHHH
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHH
Confidence            346799999999999999999999999999999 5676655444322111       02356689999999999988776


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|+|||++|.....+           .+++|+.++.++++++.    +.+.++||++||.+...+.     .
T Consensus        76 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~  150 (247)
T 2hq1_A           76 TAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGN-----A  150 (247)
T ss_dssp             HHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------------
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----C
Confidence                   7999999998653211           45688888888877765    3577899999987421111     0


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~  212 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|+++++++||.+..............  ....+.  ..+++.+|+|++
T Consensus       151 ~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~  222 (247)
T 2hq1_A          151 GQ-----ANYAASK-AGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPL--KRFGTPEEVANV  222 (247)
T ss_dssp             -C-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTT--SSCBCHHHHHHH
T ss_pred             CC-----cHhHHHH-HHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCC--CCCCCHHHHHHH
Confidence            11     1233222 23455554443    4589999999996543211000000000  001111  147899999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.++..+.. ..|++|++.++.
T Consensus       223 ~~~l~~~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          223 VGFLASDDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHcCcccccccCcEEEeCCCc
Confidence            9988874322 358899998874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.78  E-value=1.6e-18  Score=165.65  Aligned_cols=211  Identities=15%  Similarity=0.097  Sum_probs=140.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++| +....+.+......       ...++.++.+|++|.+++.++++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~   91 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-------LGAQGVAIQADISKPSEVVALFD   91 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHH
Confidence            34578999999999999999999999999999999 55444433221110       02355689999999999988876


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEeccccc-ccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTT-AASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~-~~~~~~~~~  138 (427)
                             ++|+|||++|.....+           .+++|+.++.++++++...   + ++||++||.+.+ .+.     .
T Consensus        92 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~-----~  165 (274)
T 1ja9_A           92 KAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI-----P  165 (274)
T ss_dssp             HHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC-----C
T ss_pred             HHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC-----C
Confidence                   7999999999764321           4567888999999888765   5 689999987643 211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC--------C-ccceE----Ee--cccccCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE--------S-SYNVV----VS--AEASVDA  199 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~--------~-~~~i~----~~--~~~~~~~  199 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|+++++++||.+......        . .....    ..  ....+. 
T Consensus       166 ~~-----~~Y~~sK-~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  238 (274)
T 1ja9_A          166 NH-----ALYAGSK-AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-  238 (274)
T ss_dssp             SC-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-
T ss_pred             CC-----chHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCC-
Confidence            11     1233332 33555555443    45899999999855321100        0 00000    00  001111 


Q ss_pred             CCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          200 NDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                       ..+++++|+|++++.++.++.. ..|++|++.++
T Consensus       239 -~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          239 -KRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence             1478999999999999875433 26889999876

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.78  E-value=1.1e-17  Score=160.10  Aligned_cols=207  Identities=14%  Similarity=0.114  Sum_probs=139.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.++.+.+....          ..++.++.+|++|.+++.++++ 
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----------ADAARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------hcCceEEEecCCCHHHHHHHHHH
Confidence            44578999999999999999999999999999999987655443221          1134688999999999988887 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.++.+++++    +++.+.++||++||.+.+.+.     .+
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  149 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----VA  149 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----CC
Confidence                  8999999999754321           446777777655554    455678899999987643221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .     ..|+.++ .+.+.+.+.+.    ..|+++++||||++........... ..  ..+..  .+.+.+|+|++++.
T Consensus       150 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~--~~~~~--~~~~~~dvA~~v~~  218 (260)
T 1nff_A          150 C-----HGYTATK-FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-IF--QTALG--RAAEPVEVSNLVVY  218 (260)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-CS--CCSSS--SCBCHHHHHHHHHH
T ss_pred             c-----hhHHHHH-HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhh-HH--hCccC--CCCCHHHHHHHHHH
Confidence            1     1233222 23455544433    4689999999996543211100000 00  11111  36899999999999


Q ss_pred             HhcCccc-ccCcEEEEecCC
Q 044905          216 VFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.... ..|..|++.++.
T Consensus       219 l~s~~~~~~~G~~~~v~gG~  238 (260)
T 1nff_A          219 LASDESSYSTGAEFVVDGGT  238 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HhCccccCCcCCEEEECCCe
Confidence            8875332 358899998874

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.77  E-value=5.8e-18  Score=160.73  Aligned_cols=214  Identities=14%  Similarity=0.126  Sum_probs=141.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||++|++.|+++|++|++++|+......+......       ...++.++.+|++|.+++.++++  
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   84 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-------EGHDVSSVVMDVTNTESVQNAVRSV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999997655443321111       02356789999999999888875  


Q ss_pred             -----CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|+|||++|... ..+           .+++|+.++.++++++..    .+..+||++||...+...       
T Consensus        85 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  157 (260)
T 3awd_A           85 HEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN-------  157 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC-------
Confidence                 7899999999654 211           356788888888887754    467899999877532211       


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-Ccc-ceEEec--ccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-SSY-NVVVSA--EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~~~-~i~~~~--~~~~~~~~~~i~v~DVA~  211 (427)
                       +......|+.++ .+.+.+.+.+.    ..|++++++|||.+...... ... .-....  ...+..  .+++.+|+|+
T Consensus       158 -~~~~~~~Y~~sK-~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~  233 (260)
T 3awd_A          158 -RPQQQAAYNASK-AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMG--RVGQPDEVAS  233 (260)
T ss_dssp             -SSSCCHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTS--SCBCHHHHHH
T ss_pred             -CCCCccccHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcC--CCCCHHHHHH
Confidence             111012333333 33555555544    36899999999965442211 000 000000  011111  3789999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.++..... ..|..|++.++.
T Consensus       234 ~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          234 VVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhccCCCcEEEECCce
Confidence            99998875332 367899998874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.77  E-value=1.4e-17  Score=158.95  Aligned_cols=213  Identities=17%  Similarity=0.087  Sum_probs=136.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.++...+......     .....++.++.+|++|.+++.++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIAS-----LVSGAQVDIVAGDIREPGDIDRLFEKA   80 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----HSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----cCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765444321110     0001156689999999999998886  


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|+|||++|.....+           .+++|+.++.++++++    ++.+.++||++||...+.+.     .+. 
T Consensus        81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~-  154 (260)
T 2z1n_A           81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-----QDL-  154 (260)
T ss_dssp             HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTB-
T ss_pred             HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----CCC-
Confidence                6999999999654322           4567777876666555    45678899999987643211     111 


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC-CCCCC---------CccceE-Eec--ccccCCCCCcc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE-DFSPE---------SSYNVV-VSA--EASVDANDYKV  204 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~-~~~~~---------~~~~i~-~~~--~~~~~~~~~~i  204 (427)
                          ..|+.++ .+.+.+.+.+    ...|+++++|+||++. ++...         ....-. ...  ...+..  .+.
T Consensus       155 ----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~  227 (260)
T 2z1n_A          155 ----ALSNIMR-LPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMG--RVG  227 (260)
T ss_dssp             ----HHHHHHT-HHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTS--SCC
T ss_pred             ----chhHHHH-HHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCC--Ccc
Confidence                1233322 2344444433    3568999999998432 21110         000000 000  001111  367


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+|||++++.+++.... ..|..+++.++
T Consensus       228 ~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          228 KPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            999999999999875433 36888888776

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.77  E-value=3.8e-18  Score=165.85  Aligned_cols=228  Identities=10%  Similarity=0.056  Sum_probs=147.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+......+......      ....++.++.+|++|.+++.++++.
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS------QTGNKVHAIQCDVRDPDMVQNTVSE   97 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------hcCCceEEEEeCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998765444322110      0023567899999999998887764


Q ss_pred             -------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH-----cCCCeEEEEecccccccccCCCCC
Q 044905           82 -------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL-----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        82 -------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~-----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             +|+|||++|.....+           .+++|+.++.++++++..     .+..+||++||...+.+.     .
T Consensus        98 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~  172 (302)
T 1w6u_A           98 LIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----G  172 (302)
T ss_dssp             HHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----T
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----C
Confidence                   599999999654321           456788888888877753     345789999887532211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCC-CCCCc-cc-eE--EecccccCCCCCcccHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDF-SPESS-YN-VV--VSAEASVDANDYKVAKSQI  209 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~-~~~~~-~~-i~--~~~~~~~~~~~~~i~v~DV  209 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|++++++|||.+... ..... .. ..  ......+.  ..+++++|+
T Consensus       173 ~~-----~~Y~~sK-~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~dv  244 (302)
T 1w6u_A          173 FV-----VPSASAK-AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC--GRLGTVEEL  244 (302)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT--SSCBCHHHH
T ss_pred             Cc-----chhHHHH-HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc--CCCCCHHHH
Confidence            11     1233322 33555555443    47899999999965331 11000 00 00  00001111  137899999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      |++++.++..... ..|..|++.++.   ..++.+++..+.+.
T Consensus       245 a~~~~~l~~~~~~~~~G~~~~v~gg~---~~~~~~~~~~~~~~  284 (302)
T 1w6u_A          245 ANLAAFLCSDYASWINGAVIKFDGGE---EVLISGEFNDLRKV  284 (302)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTH---HHHHHSTTGGGGGC
T ss_pred             HHHHHHHcCCcccccCCCEEEECCCe---eeccCCccccchhh
Confidence            9999999874332 258899999886   45556665555433

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.77  E-value=3.3e-18  Score=160.94  Aligned_cols=209  Identities=13%  Similarity=0.074  Sum_probs=141.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+......+...           ..++.++.+|++|.+++.++++ 
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~   73 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-----------CPGIEPVCVDLGDWDATEKALGG   73 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------STTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----------ccCCCcEEecCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999999997665544321           1234578999999999999886 


Q ss_pred             --CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        ++|+|||++|.....+           .+++|+.++.++++++...    + .++||++||...+...     .+.  
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~--  146 (244)
T 1cyd_A           74 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----PNL--  146 (244)
T ss_dssp             CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----TTB--
T ss_pred             cCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----CCc--
Confidence              4799999999654322           4567788888888877653    5 6799999987643221     111  


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-C-ccceEEe--cccccCCCCCcccHHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-S-SYNVVVS--AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~-~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                         ..|+.++ .+.+.+.+.+.    ..|++++++|||.+...... . .......  ....+.  ..+++++|+|++++
T Consensus       147 ---~~Y~~sK-~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~~  220 (244)
T 1cyd_A          147 ---ITYSSTK-GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL--RKFAEVEDVVNSIL  220 (244)
T ss_dssp             ---HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTT--SSCBCHHHHHHHHH
T ss_pred             ---chhHHHH-HHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCc--cCCCCHHHHHHHHH
Confidence               2233332 34555555543    36899999999965431100 0 0000000  001111  25899999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++++.. ..|..+++.++.
T Consensus       221 ~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          221 FLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             HHHSGGGTTCCSSEEEESTTG
T ss_pred             HHhCchhhcccCCEEEECCCc
Confidence            99875432 357888887763

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.77  E-value=2.7e-17  Score=156.58  Aligned_cols=210  Identities=13%  Similarity=0.060  Sum_probs=140.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.+....+....          ..++.++.+|++|.+++.++++ 
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~   79 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----------GNNCVFAPADVTSEKDVQTALAL   79 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----------CCceEEEEcCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999987665543321          1245689999999999988886 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------------CccccHHHHHHHHHHHHHc----------CCCeEEEEeccc
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------------TSEVSTSDAFQVIQAAQLA----------GVGHVAIIYDGN  127 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------------~~~vn~~~~~~ll~Aa~~~----------gVk~~V~vSSs~  127 (427)
                            ++|+|||++|.....+                 .+++|+.++.++++++...          +..+||++||..
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~  159 (265)
T 2o23_A           80 AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA  159 (265)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             HHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChh
Confidence                  8999999999753321                 3457888888999888764          677899998876


Q ss_pred             ccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCC
Q 044905          128 TTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDAND  201 (427)
Q Consensus       128 v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~  201 (427)
                      .+.+.     .+.     ..|+.++ .+.+.+.+.+    ...|+++++|+||++..........-....  ...+. ..
T Consensus       160 ~~~~~-----~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~  227 (265)
T 2o23_A          160 AFEGQ-----VGQ-----AAYSASK-GGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPF-PS  227 (265)
T ss_dssp             HHHCC-----TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSS-SC
T ss_pred             hcCCC-----CCC-----chhHHHH-HHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCC-cC
Confidence            43211     111     1233222 2234444333    356899999999966442211100000000  00111 01


Q ss_pred             CcccHHHHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      .+++.+|+|++++.++.+. ...|+.+.+.++.
T Consensus       228 ~~~~~~dva~~~~~l~~~~-~~~G~~i~vdgG~  259 (265)
T 2o23_A          228 RLGDPAEYAHLVQAIIENP-FLNGEVIRLDGAI  259 (265)
T ss_dssp             SCBCHHHHHHHHHHHHHCT-TCCSCEEEESTTC
T ss_pred             CCCCHHHHHHHHHHHhhcC-ccCceEEEECCCE
Confidence            4789999999999988743 4578899998875

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.77  E-value=3.7e-18  Score=160.51  Aligned_cols=211  Identities=19%  Similarity=0.155  Sum_probs=135.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceE-EEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNA-VESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~v-v~gDl~D~~sl~~al~-   80 (427)
                      +++|+||||||+||+++++.|+++|++|+++ .|+.+....+......       ...++.. +.+|++|.+++.++++ 
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~~   73 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR-------RGSPLVAVLGANLLEAEAATALVHQ   73 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH-------TTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCceEEEEeccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999998 7887655444322111       0123445 8999999999888754 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++    +..+++.+.++||++||...+.+..     +
T Consensus        74 ~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----~  148 (245)
T 2ph3_A           74 AAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP-----G  148 (245)
T ss_dssp             HHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----S
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----C
Confidence                  7999999999764321           356677774444    4555567889999999875322110     1


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .     ..|+.++ .+.+.+.+.+    ...|++++++|||.+...............  ...+.  ..+++.+|+|+++
T Consensus       149 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~  220 (245)
T 2ph3_A          149 Q-----ANYVASK-AGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPA--GRFGRPEEVAEAV  220 (245)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTT--CSCBCHHHHHHHH
T ss_pred             C-----cchHHHH-HHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCC--CCCcCHHHHHHHH
Confidence            1     1232222 2344444443    345899999999965431110000000000  00111  1478999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++.++.. ..|+.|++.++.
T Consensus       221 ~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          221 AFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHhCcccccccCCEEEECCCC
Confidence            999875432 358899998874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.76  E-value=8e-18  Score=159.41  Aligned_cols=212  Identities=16%  Similarity=0.138  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.++++||||+|+||+++++.|+++|++|+++.|+. +..+.+......       ...++.++.+|++|.+++.++++ 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA-------KGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999988754 344433222111       12345689999999999888776 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+.+.+.     .+
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  150 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGN-----PG  150 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----CC
Confidence                  7899999999765322           5678888999999888    55677899999987632221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.+| .+.+.+.+.+    ...|+++..++||++..........-...  ....+..  .+.+.+|||+++
T Consensus       151 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--r~~~~~dva~~v  222 (246)
T 3osu_A          151 QA-----NYVATK-AGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLA--RFGQDTDIANTV  222 (246)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTC--SCBCHHHHHHHH
T ss_pred             Ch-----HHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            11     233222 2244444433    35689999999996543211111000000  0111111  367899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++++... ..|..|++.++.
T Consensus       223 ~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          223 AFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCccccCCCCCEEEeCCCc
Confidence            998875433 358999998873

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.76  E-value=1.1e-17  Score=157.89  Aligned_cols=212  Identities=12%  Similarity=0.081  Sum_probs=137.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+......+......        ..++.++.+|++|.+++.++++ 
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~   75 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------PDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--------cCceEEEECCCCCHHHHHHHHHH
Confidence            5667999999999999999999999999999999997655444322110        1356789999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCC-CeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGV-GHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gV-k~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|+|||++|.....+           .+++|+.++.+++++    +++.+. ++||++||...+.+.     .
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~  150 (251)
T 1zk4_A           76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----P  150 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----T
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----C
Confidence                  4899999999754322           345666666555544    445666 799999987643221     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEE-e--cccccCCCCCcccHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVV-S--AEASVDANDYKVAKSQI  209 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~-~--~~~~~~~~~~~i~v~DV  209 (427)
                      +.     ..|+.++ .+.+.+.+.+.      ..|++++++|||++............. .  ....+..  .+++.+|+
T Consensus       151 ~~-----~~Y~~sK-~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv  222 (251)
T 1zk4_A          151 SL-----GAYNASK-GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMG--HIGEPNDI  222 (251)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTS--SCBCHHHH
T ss_pred             CC-----ccchHHH-HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCC--CCcCHHHH
Confidence            11     1233222 22444443322      568999999999654321100000000 0  0011111  37899999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.++.+... ..|..+++.++.
T Consensus       223 a~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          223 AYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHcCcccccccCcEEEECCCc
Confidence            9999999875433 358899998873

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.76  E-value=1.9e-17  Score=156.29  Aligned_cols=211  Identities=17%  Similarity=0.130  Sum_probs=138.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +++|+||||||+||+++++.|+++|++|++++|+.+....+......      ....++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH------AYADKVLRVRADVADEGDVNAAIAATM   75 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST------TTGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------hcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998765544332100      002356789999999999988876   


Q ss_pred             ----CcCEEEEccCCCCCCC--------------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP--------------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~--------------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                          ++|+|||++|.....+              .+++|+.++.++++++    ++.+.++||++||.+.+.+.     .
T Consensus        76 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~  150 (250)
T 2cfc_A           76 EQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF-----P  150 (250)
T ss_dssp             HHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----T
T ss_pred             HHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-----C
Confidence                7999999999654321              3356777776655554    45578899999987643211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-cc-ceEEe--cccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-SY-NVVVS--AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~~-~i~~~--~~~~~~~~~~~i~v~DVA  210 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|++++++|||.+....... .. .-...  ....+..  .+.+.+|+|
T Consensus       151 ~~-----~~Y~~sK-~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva  222 (250)
T 2cfc_A          151 GR-----SAYTTSK-GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQK--EIGTAAQVA  222 (250)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTC--SCBCHHHHH
T ss_pred             Cc-----hhHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCC--CCcCHHHHH
Confidence            11     1233222 23455554443    458999999999654322111 00 00000  0001111  367999999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++++.+++++.. ..|..+++.++
T Consensus       223 ~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          223 DAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             HHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             HHHHHHcCchhhcccCCEEEECCc
Confidence            999999875433 35889998876

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.76  E-value=9.8e-18  Score=162.25  Aligned_cols=213  Identities=14%  Similarity=0.104  Sum_probs=138.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|+++.|+.++...+......       ...++.++.+|++|.+++.++++ 
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~d~~~v~~~~~~  114 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-------FGYESSGYAGDVSKKEEISEVINK  114 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-------cCCceeEEECCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999887665544322111       02355689999999999988773 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.++.++++++.    +.+.++||++||.+.+.+..     +
T Consensus       115 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----~  189 (285)
T 2c07_A          115 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----G  189 (285)
T ss_dssp             HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----T
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC-----C
Confidence                  6899999999764322           34567778777766664    46778999999876322211     1


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .     ..|+.++ .+.+.+.+.+    ...|+++++++||.+...............  ...+..  .+++.+|+|+++
T Consensus       190 ~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dvA~~~  261 (285)
T 2c07_A          190 Q-----ANYSSSK-AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAG--RMGTPEEVANLA  261 (285)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTS--SCBCHHHHHHHH
T ss_pred             C-----chHHHHH-HHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCC--CCCCHHHHHHHH
Confidence            1     1233222 2344444443    346899999999965432211100000000  001111  378999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++.+... ..|..|++.++.
T Consensus       262 ~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          262 CFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCCCCCEEEeCCCc
Confidence            998875433 368889988763

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.76  E-value=1.4e-17  Score=158.51  Aligned_cols=210  Identities=14%  Similarity=0.061  Sum_probs=138.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.++...+....          ..++.++.+|++|.+++.++++ 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   72 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceeEEEecCCCHHHHHHHHHH
Confidence            56789999999999999999999999999999999976655443211          1234688999999999888776 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHH----HHHHHHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAF----QVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~----~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.    .++..+++.+.++||++||.+.+.+.     .+
T Consensus        73 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  147 (254)
T 1hdc_A           73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----AL  147 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----CC
Confidence                  7999999999764322           3456766776    44555666778899999987642211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcc-cHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKV-AKSQIASL  212 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i-~v~DVA~~  212 (427)
                      .     ..|+.+| .+.+.+.+.+    ...|+++++|+||++..........-....  ...+..  .+. +.+|+|++
T Consensus       148 ~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~--~~~~~~~dvA~~  219 (254)
T 1hdc_A          148 T-----SSYGASK-WGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMG--RVGNEPGEIAGA  219 (254)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTS--SCB-CHHHHHHH
T ss_pred             c-----hhHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCC--CCCCCHHHHHHH
Confidence            1     1233222 2344444443    356899999999965432110000000000  001111  356 99999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.++++... ..|..+++.++.
T Consensus       220 v~~l~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          220 VVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhCchhcCCCCCEEEECCCc
Confidence            9999875432 368899998875

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.76  E-value=6.1e-17  Score=155.70  Aligned_cols=209  Identities=17%  Similarity=0.127  Sum_probs=143.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++.++++  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----------GRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----------CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------CCCeEEEECCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988765543321          1244689999999999888876  


Q ss_pred             -----CcCEEEEccCCCCC--C-----------CCccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTED--G-----------PTSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~--~-----------~~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|++||++|....  .           ..+++|+.++.++++++    ++.+..+||++||...+.+.     .
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~  154 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-----D  154 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-----S
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-----C
Confidence                 79999999997622  1           14678899999999888    66778899999987643211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-CccceEEe--cccccCCCCCcccHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-SSYNVVVS--AEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~~~~i~~~--~~~~~~~~~~~i~v~DVA~  211 (427)
                      +..     .|+.+| .+.+.+.+.+.    ..|+++..|+||++...... ....-...  ....+..  .+.+.+|||+
T Consensus       155 ~~~-----~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--r~~~p~dvA~  226 (271)
T 3tzq_B          155 MST-----AYACTK-AAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAG--RIGEPHEIAE  226 (271)
T ss_dssp             SCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTS--SCBCHHHHHH
T ss_pred             CCh-----HHHHHH-HHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCC--CCcCHHHHHH
Confidence            111     233222 23444444433    47899999999966542211 00000000  0011111  3678999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.++++... ..|..+++.++.
T Consensus       227 ~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          227 LVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCcccCCcCCCEEEECCCc
Confidence            99999875433 368999998884

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.76  E-value=1e-17  Score=158.56  Aligned_cols=213  Identities=15%  Similarity=0.113  Sum_probs=137.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||||+||+++++.|+++|++|+++.| +.++.+.+......       ...++.++.+|++|.+++.++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-------LGSDAIAVRADVANAEDVTNMVK   74 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHH
Confidence            45689999999999999999999999999999999 66554443321110       01345689999999999888776


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|++||++|....++           .+++|+.++.++++++    ++.+.++||++||.+...+.     .
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  149 (246)
T 2uvd_A           75 QTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN-----P  149 (246)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----T
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC-----C
Confidence                   7999999999764322           4567777866666554    45677899999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~  212 (427)
                      +..     .|+.++ .+.+.+.+.    +...|++++.|+||++..........-...  ....+..  .+++.+|+|++
T Consensus       150 ~~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~~  221 (246)
T 2uvd_A          150 GQA-----NYVAAK-AGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAA--QFGEAQDIANA  221 (246)
T ss_dssp             TBH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTC--SCBCHHHHHHH
T ss_pred             CCc-----hHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCC--CCcCHHHHHHH
Confidence            111     222222 223333333    335789999999996543211110000000  0001111  37899999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.+++.... ..|..+++.++.
T Consensus       222 ~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          222 VTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHcCchhcCCCCCEEEECcCc
Confidence            9999874433 358889888763

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.76  E-value=1.7e-18  Score=158.73  Aligned_cols=181  Identities=14%  Similarity=0.118  Sum_probs=129.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---C
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---N   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---g   81 (427)
                      |+|+||||||+||+++++.|+++  +|++++|++.+...+.....           . .++.+|++|++++.++++   +
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----------~-~~~~~D~~~~~~~~~~~~~~~~   66 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----------A-RALPADLADELEAKALLEEAGP   66 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----------C-EECCCCTTSHHHHHHHHHHHCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----------C-cEEEeeCCCHHHHHHHHHhcCC
Confidence            58999999999999999999999  99999999766554432111           1 478999999999999988   8


Q ss_pred             cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhc
Q 044905           82 AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSR  150 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k  150 (427)
                      +|+|||++|....++           .+++|+.++.+++++++..+.++||++||.+.+...     .+.     ..|+.
T Consensus        67 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----~~~-----~~Y~~  136 (207)
T 2yut_A           67 LDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----PGF-----AAYAA  136 (207)
T ss_dssp             EEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----TTB-----HHHHH
T ss_pred             CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----CCc-----chHHH
Confidence            999999999754321           457889999999999977778899999988743221     111     22333


Q ss_pred             cccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          151 NQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       151 ~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      .+ ...+.+.+.+.    ..|++++++|||.+.....        .+.....  ..+++.+|+|++++.++.++
T Consensus       137 sK-~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~--------~~~~~~~--~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          137 AK-GALEAYLEAARKELLREGVHLVLVRLPAVATGLW--------APLGGPP--KGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HH-HHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGG--------GGGTSCC--TTCBCHHHHHHHHHHHHC--
T ss_pred             HH-HHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCc--------cccCCCC--CCCCCHHHHHHHHHHHHhCC
Confidence            32 23455555443    4799999999996543210        0111111  25899999999999999754

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.76  E-value=4.4e-17  Score=155.43  Aligned_cols=213  Identities=13%  Similarity=0.086  Sum_probs=143.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++ 
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~   76 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-------FPGQILTVQMDVRNTDDIQKMIEQ   76 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-------STTCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            5678999999999999999999999999999999998776555432211       12356789999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH-----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA-----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa-----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|.....+           .+++|+.++.++++++     ++.+..+||++||...+...     .
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  151 (257)
T 3imf_A           77 IDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG-----P  151 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----T
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----C
Confidence                  7899999999654432           4678888999988887     33457799999887632111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh-----cCCCeEEEEeCCCCCCCCCCCccceEEec-------ccccCCCCCcccH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI-----ETDVSYTFIKTSLTEDFSPESSYNVVVSA-------EASVDANDYKVAK  206 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~-----~~gl~~tilRPG~~~~~~~~~~~~i~~~~-------~~~~~~~~~~i~v  206 (427)
                      +..     .|+.+| .+.+.+.+.+.     ..|+++..|+||++......  .......       ...+..  .+.+.
T Consensus       152 ~~~-----~Y~asK-aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~--~~~~~~~~~~~~~~~~~p~~--r~~~p  221 (257)
T 3imf_A          152 GVI-----HSAAAK-AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGA--DKLWISEEMAKRTIQSVPLG--RLGTP  221 (257)
T ss_dssp             TCH-----HHHHHH-HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---------CCSHHHHTTSTTC--SCBCH
T ss_pred             CcH-----HHHHHH-HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcch--hhcccCHHHHHHHHhcCCCC--CCcCH
Confidence            111     222222 22333333332     35899999999966432110  0000000       001111  36799


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecCCCC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      +|||++++.++++... ..|..+++.++...
T Consensus       222 edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  252 (257)
T 3imf_A          222 EEIAGLAYYLCSDEAAYINGTCMTMDGGQHL  252 (257)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTS
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEECCCccc
Confidence            9999999999875433 36899999888643

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.76  E-value=1.5e-17  Score=156.52  Aligned_cols=208  Identities=13%  Similarity=0.105  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.++.+.+...           ..++.++.+|++|.+++.++++  
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~   74 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-----------CPGIEPVCVDLGDWEATERALGSV   74 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------STTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----------cCCCCEEEEeCCCHHHHHHHHHHc
Confidence            346899999999999999999999999999999997665544321           1134578999999999999886  


Q ss_pred             -CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCCCCcc
Q 044905           81 -NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                       ++|+|||++|.....+           .+++|+.++.++++++..    .+ .++||++||...+...        +. 
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------~~-  145 (244)
T 3d3w_A           75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV--------TN-  145 (244)
T ss_dssp             CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC--------TT-
T ss_pred             CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC--------CC-
Confidence             5899999999754322           456778888888887765    35 6799999987632211        11 


Q ss_pred             chhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc---cce-EEecccccCCCCCcccHHHHHHHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS---YNV-VVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~---~~i-~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                       ...|+.+| .+.+.+.+.+.    ..|+++++++||.+........   ... .......+.  ..+++++|+|++++.
T Consensus       146 -~~~Y~~sK-~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~~~~  221 (244)
T 3d3w_A          146 -HSVYCSTK-GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPL--GKFAEVEHVVNAILF  221 (244)
T ss_dssp             -BHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTT--CSCBCHHHHHHHHHH
T ss_pred             -CchHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCC--CCCcCHHHHHHHHHH
Confidence             12333333 34566555543    3689999999996543211000   000 000001111  147899999999999


Q ss_pred             HhcCccc-ccCcEEEEecCC
Q 044905          216 VFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++++... ..|+.|++.++.
T Consensus       222 l~~~~~~~~~G~~~~v~gG~  241 (244)
T 3d3w_A          222 LLSDRSGMTTGSTLPVEGGF  241 (244)
T ss_dssp             HHSGGGTTCCSCEEEESTTG
T ss_pred             HcCccccCCCCCEEEECCCc
Confidence            9875322 358899998873

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.76  E-value=9.4e-18  Score=160.62  Aligned_cols=203  Identities=12%  Similarity=0.144  Sum_probs=138.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+......                .++.++.+|++|++++.++++  
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------------~~~~~~~~Dv~d~~~v~~~~~~~   90 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------------PDIHTVAGDISKPETADRIVREG   90 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------------TTEEEEESCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------------CceEEEEccCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998764221                134589999999999888776  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||+||.....+           .+++|+.++.++++++    ++.+..+||++||+..+...        
T Consensus        91 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~--------  162 (260)
T 3un1_A           91 IERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM--------  162 (260)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB--------
T ss_pred             HHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC--------
Confidence                 7999999999765432           4568888998888877    56678899999887642111        


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      +......|+.+| .+.+.+.+.+.    ..|+++..|+||++..........-.. ....+..  .+.+++|||++++.+
T Consensus       163 ~~~~~~~Y~~sK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~-~~~~p~~--r~~~~~dva~av~~L  238 (260)
T 3un1_A          163 VGMPSALASLTK-GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTL-AGLHPVG--RMGEIRDVVDAVLYL  238 (260)
T ss_dssp             TTCCCHHHHHHH-HHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHH-HTTSTTS--SCBCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHH-HHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHH-hccCCCC--CCcCHHHHHHHHHHh
Confidence            111112233222 23455554443    458999999999665432211000000 0111111  377999999999988


Q ss_pred             hcCcccccCcEEEEecCC
Q 044905          217 FSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~~  234 (427)
                      ... ....|.+|++.++.
T Consensus       239 ~~~-~~itG~~i~vdGG~  255 (260)
T 3un1_A          239 EHA-GFITGEILHVDGGQ  255 (260)
T ss_dssp             HHC-TTCCSCEEEESTTG
T ss_pred             ccc-CCCCCcEEEECCCe
Confidence            442 23478999998874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.76  E-value=1.4e-17  Score=158.91  Aligned_cols=213  Identities=13%  Similarity=0.068  Sum_probs=142.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++.+++  
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   79 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-------KGFKVEASVCDLSSRSERQELMNT   79 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998765444322111       0134568999999999988877  


Q ss_pred             ------cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           80 ------GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        80 ------~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .++|+|||++|.....+           .+++|+.++.++++++    ++.+.++||++||.+.+.+.     .
T Consensus        80 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  154 (260)
T 2ae2_A           80 VANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----P  154 (260)
T ss_dssp             HHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----T
T ss_pred             HHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----C
Confidence                  57999999999754322           4567888888888887    35677899999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-c--cceE----EecccccCCCCCcccHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-S--YNVV----VSAEASVDANDYKVAKS  207 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~--~~i~----~~~~~~~~~~~~~i~v~  207 (427)
                      +.     ..|+.+| .+.+.+.+.+.    ..|++++.++||.+....... .  ....    ......+..  .+++.+
T Consensus       155 ~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  226 (260)
T 2ae2_A          155 YE-----AVYGATK-GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR--RMGEPK  226 (260)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC--SCBCHH
T ss_pred             Cc-----chHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCC--CCCCHH
Confidence            11     2233332 33555555443    458999999999664321100 0  0000    000001111  378999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |+|++++.+++.... ..|..+++.++.
T Consensus       227 dvA~~v~~l~s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          227 ELAAMVAFLCFPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            999999998874333 368899998874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.76  E-value=1.1e-17  Score=158.33  Aligned_cols=209  Identities=15%  Similarity=0.105  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++|+||||+|+||+++++.|+++|++|++++|+.+++..+....          ..++.++.+|++|.+++.++++  
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~   82 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL----------KDNYTIEVCNLANKEECSNLISKT   82 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------ccCccEEEcCCCCHHHHHHHHHhc
Confidence            5678999999999999999999999999999999987665553321          1355689999999999998886  


Q ss_pred             -CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCCccc
Q 044905           81 -NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                       ++|++||++|......           .+++|+.++.++++++.    +.+..+||++||...+.+.     .+.    
T Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~----  153 (249)
T 3f9i_A           83 SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----PGQ----  153 (249)
T ss_dssp             SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----SCS----
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----CCC----
Confidence             6899999999654321           45678888888877764    3566799999987643221     111    


Q ss_pred             hhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHHHHhc
Q 044905          145 NNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                       ..|+.+| .+.+.+.+.+    ...|+++..++||++..........-...  ....+..  .+.+.+|+|++++.+++
T Consensus       154 -~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~l~s  229 (249)
T 3f9i_A          154 -ANYCASK-AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLG--TYGIPEDVAYAVAFLAS  229 (249)
T ss_dssp             -HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTC--SCBCHHHHHHHHHHHHS
T ss_pred             -chhHHHH-HHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHcC
Confidence             1233222 2344444433    35689999999996654221111000000  0011111  47889999999999987


Q ss_pred             Cccc-ccCcEEEEecCC
Q 044905          219 NTAV-AENKVVKVFTDP  234 (427)
Q Consensus       219 ~~~~-~~g~~~nI~~~~  234 (427)
                      +... ..|+.|++.++.
T Consensus       230 ~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          230 NNASYITGQTLHVNGGM  246 (249)
T ss_dssp             GGGTTCCSCEEEESTTS
T ss_pred             CccCCccCcEEEECCCE
Confidence            5433 368999998874

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.76  E-value=5e-17  Score=154.21  Aligned_cols=209  Identities=15%  Similarity=0.133  Sum_probs=136.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHH-HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQE-LARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~-l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|++ +.... +...           ..++.++.+|++|.+++.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~   73 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-----------GRRVLTVKCDVSQPGDVEAFG   73 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-----------TCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhc-----------CCcEEEEEeecCCHHHHHHHH
Confidence            4557899999999999999999999999999999998 54433 2111           134568999999999888775


Q ss_pred             -------cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCC
Q 044905           80 -------GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        80 -------~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             .++|+|||++|.....+           .+++|+.++.+++++    +++.+..+||++||...+.+.     
T Consensus        74 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  148 (249)
T 2ew8_A           74 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----  148 (249)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----
Confidence                   47999999999764332           456777787777776    556678899999987643211     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC-Ccc-c--eEEecccccCCCCCcccHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE-SSY-N--VVVSAEASVDANDYKVAKSQI  209 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~-~~~-~--i~~~~~~~~~~~~~~i~v~DV  209 (427)
                      .+.     ..|+.+| .+.+.+.+.+.    ..|++++.|+||++...... ... .  -.......+..  .+.+.+|+
T Consensus       149 ~~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~dv  220 (249)
T 2ew8_A          149 EAY-----THYISTK-AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIP--RLQVPLDL  220 (249)
T ss_dssp             SSC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSC--SCCCTHHH
T ss_pred             CCc-----hhHHHHH-HHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccC--CCCCHHHH
Confidence            111     1233222 23444444433    46899999999965432111 000 0  00000001111  36899999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.+++.... ..|..+++.++.
T Consensus       221 a~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          221 TGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHcCcccCCCCCcEEEECCCc
Confidence            9999999874322 368888888774

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.76  E-value=1e-17  Score=160.09  Aligned_cols=213  Identities=13%  Similarity=0.089  Sum_probs=140.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.++.+.+......      ....++.++.+|++|.+++.++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE------KFGVRVLEVAVDVATPEGVDAVVESV   79 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHCCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH------hcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765544322110      001345689999999999888776  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++.    +.+.++||++||.+.+.+.     .+.
T Consensus        80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  154 (263)
T 3ai3_A           80 RSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----WYE  154 (263)
T ss_dssp             HHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----CCc
Confidence                 7999999999754322           34567778888877764    4577899999988743221     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-c-----------ceEE-eccc-ccCCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-Y-----------NVVV-SAEA-SVDANDY  202 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~-----------~i~~-~~~~-~~~~~~~  202 (427)
                           ..|+.+| .+.+.+.+.+.    ..|+++++|+||++........ .           .... .... .+..  .
T Consensus       155 -----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~  226 (263)
T 3ai3_A          155 -----PIYNVTK-AALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIK--R  226 (263)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTC--S
T ss_pred             -----chHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCC--C
Confidence                 1233222 23444444433    4689999999996543210000 0           0000 0000 1111  4


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+|||++++.+++.+.. ..|..|++.++.
T Consensus       227 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          227 FASPEELANFFVFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            78999999999999875433 358899998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.76  E-value=1.9e-17  Score=155.53  Aligned_cols=201  Identities=13%  Similarity=0.145  Sum_probs=133.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |.+++|+||||+|+||+++++.|+++|  ++|++++|+....+.+...          ...++.++.+|++|.+++.+++
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~----------~~~~~~~~~~D~~~~~~~~~~~   70 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----------KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc----------cCCceEEEEeecCCHHHHHHHH
Confidence            567899999999999999999999999  9999999998766555321          1235678999999999998887


Q ss_pred             c---------CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHHc----------C-----CCeEEEE
Q 044905           80 G---------NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQLA----------G-----VGHVAII  123 (427)
Q Consensus        80 ~---------g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~~----------g-----Vk~~V~v  123 (427)
                      +         ++|+|||++|... ..+           .+++|+.++.++++++...          +     ..+||++
T Consensus        71 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  150 (250)
T 1yo6_A           71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEe
Confidence            6         8999999999765 221           4567778888888776543          5     7899999


Q ss_pred             ecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCC
Q 044905          124 YDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDA  199 (427)
Q Consensus       124 SSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~  199 (427)
                      ||...+.+...  ..... .....|+.++ .+.+.+.+.+.    ..|+++++++||++.....   ..           
T Consensus       151 sS~~~~~~~~~--~~~~~-~~~~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~---~~-----------  212 (250)
T 1yo6_A          151 SSGLGSITDNT--SGSAQ-FPVLAYRMSK-AAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG---GK-----------  212 (250)
T ss_dssp             CCGGGCSTTCC--STTSS-SCBHHHHHHH-HHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------
T ss_pred             ccCccccCCcc--ccccc-CCccHHHHHH-HHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC---CC-----------
Confidence            98764322110  00000 1112343333 34555555544    3589999999997654211   00           


Q ss_pred             CCCcccHHHHHHHHHHHhcCcccc-cCcEEEEe
Q 044905          200 NDYKVAKSQIASLVADVFSNTAVA-ENKVVKVF  231 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~~-~g~~~nI~  231 (427)
                       ..+++.+|+|+.++.++...... .|..+.+.
T Consensus       213 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~  244 (250)
T 1yo6_A          213 -NAALTVEQSTAELISSFNKLDNSHNGRFFMRN  244 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred             -CCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence             13679999999999999765433 45555443

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.75  E-value=9.6e-18  Score=160.08  Aligned_cols=209  Identities=14%  Similarity=0.125  Sum_probs=141.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+....+....          ..++.++.+|++|.+++.++++  
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----------GPAAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCCceEEEeeCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987665543321          1244689999999999888876  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++...    + ..+||++||...+.+.     .+
T Consensus        77 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  151 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----AL  151 (259)
T ss_dssp             HHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TT
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----CC
Confidence                 7999999999765422           4558888888888887543    3 4589999887632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-----------c-c-eEEecccccCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-----------Y-N-VVVSAEASVDANDY  202 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-----------~-~-i~~~~~~~~~~~~~  202 (427)
                      .     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++........           . . ........+..  .
T Consensus       152 ~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r  223 (259)
T 4e6p_A          152 V-----AIYCATK-AAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFG--R  223 (259)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS--S
T ss_pred             C-----hHHHHHH-HHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCC--C
Confidence            1     2233332 23444444443    5689999999996654211000           0 0 00000111112  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+.+|||++++.+++.... ..|.+|++.++.
T Consensus       224 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          224 MGTAEDLTGMAIFLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             CBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence            78999999999998874332 358999998885

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.75  E-value=2.5e-17  Score=155.96  Aligned_cols=207  Identities=16%  Similarity=0.119  Sum_probs=138.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|++++|+.++...+....            ++.++.+|++|.+++.++++ 
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~D~~~~~~~~~~~~~   70 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------------GAHPVVMDVADPASVERGFAE   70 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------------TCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------------CCEEEEecCCCHHHHHHHHHH
Confidence            45679999999999999999999999999999999976655443210            13588999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.++.++++++..    .+..+||++||.+ ..+..     +
T Consensus        71 ~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~-----~  144 (245)
T 1uls_A           71 ALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNL-----G  144 (245)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCT-----T
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCC-----C
Confidence                  4899999999764332           456888888888887754    3678999999876 22211     1


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|..++ ...+.+.+.    +...|++++.|+||++..........-....  ...+..  .+.+.+|+|+++
T Consensus       145 ~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~~v  216 (245)
T 1uls_A          145 QA-----NYAASM-AGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLG--RAGKPLEVAYAA  216 (245)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTC--SCBCHHHHHHHH
T ss_pred             ch-----hHHHHH-HHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCC--CCcCHHHHHHHH
Confidence            11     222222 123333333    3457899999999966442211110000000  001111  378999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++++... ..|..+.+.++.
T Consensus       217 ~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          217 LFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCchhcCCcCCEEEECCCc
Confidence            998875432 368888888774

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.75  E-value=2.8e-17  Score=153.84  Aligned_cols=195  Identities=16%  Similarity=0.160  Sum_probs=126.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||||+||+++++.|+++|++|++++|+......+...           ..++.++.+|++|.+++.++++   
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   73 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAE-----------LEGALPLPGDVREEGDWARAVAAME   73 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------STTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----------hhhceEEEecCCCHHHHHHHHHHHH
Confidence            45799999999999999999999999999999997665544321           1245689999999998887765   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHH----HHHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVI----QAAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll----~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|+|||++|....++           .+++|+.++.+++    ..+++.+.++||++||.+.+...     .+. 
T Consensus        74 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~-  147 (234)
T 2ehd_A           74 EAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF-----KGG-  147 (234)
T ss_dssp             HHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC-----TTC-
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC-----CCC-
Confidence                6899999999754322           3456666766444    44566778899999987643211     111 


Q ss_pred             ccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHh
Q 044905          142 SFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                          ..|+..+ .+.+.+.+.    +...|++++++|||++......   ..    +.. .   .+++.+|+|++++.++
T Consensus       148 ----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~----~~~-~---~~~~~~dvA~~~~~l~  211 (234)
T 2ehd_A          148 ----AAYNASK-FGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAG---NT----PGQ-A---WKLKPEDVAQAVLFAL  211 (234)
T ss_dssp             ----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------CCHHHHHHHHHHHH
T ss_pred             ----chhhHHH-HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccc---cc----ccc-c---CCCCHHHHHHHHHHHh
Confidence                1233222 223444433    3357899999999966442111   10    000 1   1579999999999999


Q ss_pred             cCcccccCcEEEEe
Q 044905          218 SNTAVAENKVVKVF  231 (427)
Q Consensus       218 ~~~~~~~g~~~nI~  231 (427)
                      .++..+....+.+.
T Consensus       212 ~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          212 EMPGHAMVSEIELR  225 (234)
T ss_dssp             HSCCSSCCCEEECC
T ss_pred             CCCcccccceEEEe
Confidence            76544444444444

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.75  E-value=7e-18  Score=154.28  Aligned_cols=180  Identities=13%  Similarity=0.132  Sum_probs=129.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      .+|+|+||||||+||+++++.|+ +|++|++++|+..                        .+.+|++|.+++.++++. 
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------~~~~D~~~~~~~~~~~~~~   56 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------DVTVDITNIDSIKKMYEQV   56 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------SEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------ceeeecCCHHHHHHHHHHh
Confidence            34689999999999999999999 9999999999863                        368999999999988875 


Q ss_pred             --cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCCccch
Q 044905           82 --AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        82 --~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                        +|+|||++|.....+           .+++|+.++.++++++...   + ++||++||...+..        .+..  
T Consensus        57 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~--------~~~~--  125 (202)
T 3d7l_A           57 GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP--------IVQG--  125 (202)
T ss_dssp             CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC--------CTTC--
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC--------CCcc--
Confidence              899999999654322           3467888999999999876   4 68999987753211        1111  


Q ss_pred             hhhhccccccHHHHHHHHh-c--CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCccc
Q 044905          146 NLFSRNQPLTVPEFLQKVI-E--TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAV  222 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~--~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~  222 (427)
                      ..|+..+ ...+.+.+.+. +  .|++++++|||++.....    .   .+...  ....+++++|+|++++.++..  .
T Consensus       126 ~~Y~~sK-~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~----~---~~~~~--~~~~~~~~~dva~~~~~~~~~--~  193 (202)
T 3d7l_A          126 ASAAMAN-GAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD----K---LEPFF--EGFLPVPAAKVARAFEKSVFG--A  193 (202)
T ss_dssp             HHHHHHH-HHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH----H---HGGGS--TTCCCBCHHHHHHHHHHHHHS--C
T ss_pred             HHHHHHH-HHHHHHHHHHHHHccCCeEEEEEecCccCCchh----h---hhhhc--cccCCCCHHHHHHHHHHhhhc--c
Confidence            2333332 34677777665 2  489999999996543211    0   01111  123589999999999888742  3


Q ss_pred             ccCcEEEE
Q 044905          223 AENKVVKV  230 (427)
Q Consensus       223 ~~g~~~nI  230 (427)
                      ..|++|++
T Consensus       194 ~~G~~~~v  201 (202)
T 3d7l_A          194 QTGESYQV  201 (202)
T ss_dssp             CCSCEEEE
T ss_pred             ccCceEec
Confidence            46778876

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.75  E-value=2.7e-17  Score=155.31  Aligned_cols=213  Identities=15%  Similarity=0.138  Sum_probs=142.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|+++.|+......+......       ...++.++.+|++|.+++.++++ 
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   75 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-------KGFKARGLVLNISDIESIQNFFAE   75 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHH
Confidence            3567999999999999999999999999999999998766554432211       12356789999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++..    .+..+||++||...+.+.     .+
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  150 (247)
T 3lyl_A           76 IKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGN-----PG  150 (247)
T ss_dssp             HHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----CC
Confidence                  5799999999765432           456788888888877643    456799999887632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEE--ecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVV--SAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~--~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.++ .+.+.+.+.+    ...|+++..++||++..........-..  .....+..  .+.+.+|+|+++
T Consensus       151 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~i  222 (247)
T 3lyl_A          151 QT-----NYCAAK-AGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSG--QIGEPKDIAAAV  222 (247)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTC--CCBCHHHHHHHH
T ss_pred             cH-----HHHHHH-HHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCC--CCcCHHHHHHHH
Confidence            11     233222 2234444433    3568999999999665432211110000  00111111  478999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++++... ..|+.|++.++.
T Consensus       223 ~~l~s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          223 AFLASEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCccCCEEEECCCE
Confidence            998875433 368999998874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.75  E-value=9.7e-18  Score=157.68  Aligned_cols=210  Identities=15%  Similarity=0.098  Sum_probs=137.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      ++|+||||||+||+++++.|+++|++|+++ .|+....+.+......       ...++.++.+|++|.+++.++++   
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~   74 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-------YGGQAITFGGDVSKEADVEAMMKTAI   74 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------HTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            689999999999999999999999999995 7877655444322111       02356689999999999988876   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|+|||++|.....+           .+++|+.++.++++++..    .+.++||++||.+.+.+.     .+..
T Consensus        75 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----~~~~  149 (244)
T 1edo_A           75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----IGQA  149 (244)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----TTCH
T ss_pred             HHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----CCCc
Confidence                7899999999765322           456788888888887765    477899999987532211     1111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                           .|+.++ .+.+.+.+.+    ...|++++++|||++..............  ....+..  .+++.+|+|++++.
T Consensus       150 -----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~~~  221 (244)
T 1edo_A          150 -----NYAAAK-AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLG--RTGQPENVAGLVEF  221 (244)
T ss_dssp             -----HHHHHH-HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTC--SCBCHHHHHHHHHH
T ss_pred             -----cchhhH-HHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCC--CCCCHHHHHHHHHH
Confidence                 222222 2234444333    35689999999996543211000000000  0001111  37899999999999


Q ss_pred             HhcCcc--cccCcEEEEecCC
Q 044905          216 VFSNTA--VAENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~--~~~g~~~nI~~~~  234 (427)
                      ++..+.  ...|+.|++.++.
T Consensus       222 l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          222 LALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTTT
T ss_pred             HhCCCccCCcCCCEEEeCCCc
Confidence            884332  2358899998773

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.75  E-value=2e-17  Score=156.77  Aligned_cols=210  Identities=13%  Similarity=0.099  Sum_probs=125.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++.++++ 
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   79 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-------DGGTAISVAVDVSDPESAKAMADR   79 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999998766555432211       12456789999999999888776 


Q ss_pred             ------CcCEEEEccCCCCC---------C-----CCccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           81 ------NAGKVVVTIGPTED---------G-----PTSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~---------~-----~~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                            ++|+|||++|....         .     ..+++|+.++.++++++    ++.+..+||++||...+.      
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------  153 (253)
T 3qiv_A           80 TLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWL------  153 (253)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC-----------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccC------
Confidence                  79999999997321         1     15578888866665554    456778999999887431      


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEEec--ccccCCCCCcccHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVVSA--EASVDANDYKVAKSQI  209 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~~~--~~~~~~~~~~i~v~DV  209 (427)
                        +..     .|+.++ .+.+.+.+.+.    ..|+++..++||++........ ..-....  ...+..  .+.+.+|+
T Consensus       154 --~~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dv  223 (253)
T 3qiv_A          154 --YSN-----YYGLAK-VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLS--RMGTPDDL  223 (253)
T ss_dssp             -------------CCH-HHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------CCHH
T ss_pred             --CCc-----hhHHHH-HHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCC--CCCCHHHH
Confidence              111     233222 23444444443    4589999999996543211000 0000000  001111  35678999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.++++... ..|+.|++.++.
T Consensus       224 a~~~~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          224 VGMCLFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEC----
T ss_pred             HHHHHHHcCccccCCCCCEEEECCCe
Confidence            9999998874322 368999998875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.75  E-value=5.9e-17  Score=154.29  Aligned_cols=210  Identities=15%  Similarity=0.106  Sum_probs=136.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+......+....          ..++.++.+|++|.+++.++++  
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----------GAAVRFRNADVTNEADATAALAFA   75 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------CCceEEEEccCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987654443211          1245689999999999888876  


Q ss_pred             -----CcCEEEEccCCCCCCC---------------CccccHHHHHHHHHHHHHc----------CCCeEEEEecccccc
Q 044905           81 -----NAGKVVVTIGPTEDGP---------------TSEVSTSDAFQVIQAAQLA----------GVGHVAIIYDGNTTA  130 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~---------------~~~vn~~~~~~ll~Aa~~~----------gVk~~V~vSSs~v~~  130 (427)
                           ++|++||++|......               .+++|+.++.++++++...          +..+||++||.+.+.
T Consensus        76 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tpc_A           76 KQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD  155 (257)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc
Confidence                 7999999999764321               4568888999999888763          456799998876432


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcc
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKV  204 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i  204 (427)
                      +..     +.     ..|+.+| .+.+.+.+.+    ...|+++..++||++..........-...  ....+.. ..+.
T Consensus       156 ~~~-----~~-----~~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~-~r~~  223 (257)
T 3tpc_A          156 GQI-----GQ-----AAYAASK-GGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFP-PRLG  223 (257)
T ss_dssp             CCT-----TC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSS-CSCB
T ss_pred             CCC-----CC-----cchHHHH-HHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCC-CCCC
Confidence            211     11     1233222 2234443333    35789999999996644221110000000  0011110 1378


Q ss_pred             cHHHHHHHHHHHhcCcccccCcEEEEecCCC
Q 044905          205 AKSQIASLVADVFSNTAVAENKVVKVFTDPS  235 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~  235 (427)
                      +.+|+|++++.++++ .-..|..+++.++..
T Consensus       224 ~~~dva~~v~~l~s~-~~itG~~i~vdGG~~  253 (257)
T 3tpc_A          224 RAEEYAALVKHICEN-TMLNGEVIRLDGALR  253 (257)
T ss_dssp             CHHHHHHHHHHHHHC-TTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHHHHccc-CCcCCcEEEECCCcc
Confidence            999999999999875 345789999988853

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.75  E-value=1.7e-17  Score=158.26  Aligned_cols=213  Identities=13%  Similarity=0.091  Sum_probs=141.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++ 
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~~   84 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG-------EGLSVTGTVCHVGKAEDRERLVAM   84 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998765443321110       01345688999999998887775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|.... .+           .+++|+.++.++++++.    +.+.++||++||.+.+...     .
T Consensus        85 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  159 (260)
T 2zat_A           85 AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF-----P  159 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----T
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----C
Confidence                  79999999996431 11           45678888888887764    5678899999987743211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc--cc-e-EEecccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS--YN-V-VVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~--~~-i-~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|++++.++||++........  .. . .......+..  .+.+.+|||
T Consensus       160 ~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva  231 (260)
T 2zat_A          160 NL-----GPYNVSK-TALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIR--RLGNPEDCA  231 (260)
T ss_dssp             TB-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCS--SCBCGGGGH
T ss_pred             Cc-----hhHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCC--CCCCHHHHH
Confidence            11     1233222 23445554443    4689999999996654221100  00 0 0000001111  378999999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++++.++++... ..|.+|++.++.
T Consensus       232 ~~v~~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          232 GIVSFLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             HHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHcCcccCCccCCEEEECCCc
Confidence            999999875433 368899999886

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.75  E-value=1.3e-17  Score=157.75  Aligned_cols=210  Identities=14%  Similarity=0.096  Sum_probs=137.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccc-eEEEecCCCHHHHHHHh--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRL-NAVESNFDSAESIAKAI--   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl-~vv~gDl~D~~sl~~al--   79 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.++.+.+....          ..++ .++.+|++|.+++.+++  
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL----------GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------cccceeEEEEecCCHHHHHHHHHH
Confidence            4468999999999999999999999999999999987654443211          1233 57899999999988876  


Q ss_pred             ----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           80 ----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          .++|+|||++|.....+           .+++|+.++.++++++    ++.+.++||++||.+.+.+..       
T Consensus        80 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------  152 (254)
T 2wsb_A           80 AEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR-------  152 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS-------
T ss_pred             HHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC-------
Confidence                47899999999754322           3456777766666654    456788999999876432211       


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc---ceEEe-cccccCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY---NVVVS-AEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~---~i~~~-~~~~~~~~~~~i~v~DVA~~  212 (427)
                       ......|+.++ .+.+.+.+.+.    ..|++++++|||.+.........   ..... ....+.  ..+++.+|+|++
T Consensus       153 -~~~~~~Y~~sK-~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dva~~  228 (254)
T 2wsb_A          153 -PQFASSYMASK-GAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM--GRCGEPSEIAAA  228 (254)
T ss_dssp             -SSCBHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT--SSCBCHHHHHHH
T ss_pred             -CCcchHHHHHH-HHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC--CCCCCHHHHHHH
Confidence             11112333332 33455554443    45899999999965432110000   00000 000111  147899999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecC
Q 044905          213 VADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++.++.+... ..|..+++.++
T Consensus       229 ~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          229 ALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCcccccccCCEEEECCC
Confidence            9998875332 36889998877

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.75  E-value=2.7e-17  Score=156.12  Aligned_cols=209  Identities=18%  Similarity=0.154  Sum_probs=141.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+.+..+.+.....          .+...+.+|++|.+++.++++  
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----------DNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------ccceEEEEeCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999999876655433211          234579999999999888776  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++..    .+..+||++||...+.+.     .+.
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~  152 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----AGQ  152 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TTC
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----CCC
Confidence                 7999999999765432           457788888888887744    567799999887632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEE--ecccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVV--SAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~--~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      .     .|+.+| .+.+.+.+.+    ...|+++..|+||++..........-..  .....+..  .+.+.+|||++++
T Consensus       153 ~-----~Y~asK-~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva~~v~  224 (248)
T 3op4_A          153 A-----NYAAAK-AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAG--RLGDPREIASAVA  224 (248)
T ss_dssp             H-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTC--SCBCHHHHHHHHH
T ss_pred             h-----HHHHHH-HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            2     232222 2233344333    3568999999999665432211100000  00011111  3779999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++.... ..|+.+++.++.
T Consensus       225 ~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          225 FLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHcCCccCCccCcEEEECCCe
Confidence            98874332 368999998874

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.75  E-value=1.9e-17  Score=159.56  Aligned_cols=214  Identities=17%  Similarity=0.184  Sum_probs=133.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+..+...+.......     ....++.++.+|++|.+++.++++  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-----GYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc-----CCCceEEEEEecCCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999987655443221110     001345689999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHH----HHHHHHHHHHcCC--CeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSD----AFQVIQAAQLAGV--GHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~----~~~ll~Aa~~~gV--k~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|+|||++|.....+           .+++|+.+    +.+++.++++.++  ++||++||.+.+...      
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~------  179 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------  179 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC------
T ss_pred             HHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC------
Confidence                 7999999999654322           34566667    6667777888876  799999987632110      


Q ss_pred             CCCccchhhhhccccccHHHHHHH----Hh--cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VI--ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~--~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      +.+  ....|+..+ .+.+.+.+.    +.  ..+++++.|+||++..........-.............+++.+|+|++
T Consensus       180 ~~~--~~~~Y~~sK-~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  256 (279)
T 1xg5_A          180 PLS--VTHFYSATK-YAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEA  256 (279)
T ss_dssp             SCG--GGHHHHHHH-HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHH
T ss_pred             CCC--CCchhHHHH-HHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHH
Confidence            111  112333332 233444333    23  568999999999664321100000000000000011247899999999


Q ss_pred             HHHHhcCcccccCcEEEE
Q 044905          213 VADVFSNTAVAENKVVKV  230 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI  230 (427)
                      ++.++..+.......+.+
T Consensus       257 i~~l~~~~~~~~~g~i~i  274 (279)
T 1xg5_A          257 VIYVLSTPAHIQIGDIQM  274 (279)
T ss_dssp             HHHHHHSCTTEEEEEEEE
T ss_pred             HHHHhcCCcceEeeeEEE
Confidence            999998654333333333

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.75  E-value=3.6e-17  Score=156.55  Aligned_cols=216  Identities=15%  Similarity=0.123  Sum_probs=143.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......      ....++.++.+|++|.+++.++++  
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ------LGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT------TSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------hCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999998766554332111      111356789999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----CCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++...    +..+||++||......    ...+.
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----~~~~~  158 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----GYPGW  158 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----CCTTC
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----CCCCC
Confidence                 7999999999765432           4577888888888877654    7889999998762100    00111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ceEE-ecccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NVVV-SAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i~~-~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                           ..|+.+| .+.+.+.+.+.    ..|+++..|+||++......... .... .....+..  .+.+.+|||++++
T Consensus       159 -----~~Y~asK-~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva~~v~  230 (262)
T 3pk0_A          159 -----SHYGATK-AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAG--ALGTPEDIGHLAA  230 (262)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTS--SCBCHHHHHHHHH
T ss_pred             -----hhhHHHH-HHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence                 1233222 23444444433    46999999999966432100000 0000 00011111  3679999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCCCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      .+++.... ..|..+++.++...
T Consensus       231 ~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          231 FLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCcCCEEEECCCeec
Confidence            98875432 46899999888644

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.75  E-value=1.3e-17  Score=159.20  Aligned_cols=209  Identities=16%  Similarity=0.133  Sum_probs=139.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+......+....          ..++.++.+|++|.+++.++++  
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----------ENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----------TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------hcCCeEEEEeCCCHHHHHHHHHHH
Confidence            3468999999999999999999999999999999976554442210          1145689999999999988876  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++..    .+ ..+||++||...+.+.     .+
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  155 (263)
T 3ak4_A           81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA-----PL  155 (263)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----TT
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC-----CC
Confidence                 7999999999754332           446777788888877754    35 6899999887632111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-----------ceEEe--cccccCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-----------NVVVS--AEASVDANDY  202 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-----------~i~~~--~~~~~~~~~~  202 (427)
                      .     ..|+.++ .+.+.+.+.+    ...|+++++|+||++.........           .-...  ....+..  .
T Consensus       156 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~  227 (263)
T 3ak4_A          156 L-----AHYSASK-FAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLG--R  227 (263)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTC--S
T ss_pred             c-----hhHHHHH-HHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCC--C
Confidence            1     1233322 2344444443    346999999999966432110000           00000  0001111  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+|||++++.++++... ..|..|++.++.
T Consensus       228 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          228 IEEPEDVADVVVFLASDAARFMTGQGINVTGGV  260 (263)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence            78999999999999875432 368899998874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.74  E-value=2.9e-17  Score=159.36  Aligned_cols=221  Identities=13%  Similarity=0.003  Sum_probs=143.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+..+...+....          ..++.++.+|++|.+++.++++ 
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~d~~~v~~~~~~   83 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----------AGQVEVRELDLQDLSSVRRFADG   83 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----------SSEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------cCCeeEEEcCCCCHHHHHHHHHh
Confidence            34578999999999999999999999999999999987655443211          2356789999999999999887 


Q ss_pred             --CcCEEEEccCCCCCC---------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC--CC-CCccchh
Q 044905           81 --NAGKVVVTIGPTEDG---------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL--DG-ISSFFNN  146 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~---------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~--~~-~~~~~~~  146 (427)
                        ++|+|||+||.....         ..+++|+.++.++++++.....++||++||.+.+.+......  .. .+.....
T Consensus        84 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~  163 (291)
T 3rd5_A           84 VSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWL  163 (291)
T ss_dssp             CCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHH
T ss_pred             cCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcc
Confidence              579999999975421         156789999999999999888889999998875433211100  00 1111123


Q ss_pred             hhhccccccHHHHHHHHh----cCC--CeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          147 LFSRNQPLTVPEFLQKVI----ETD--VSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~----~~g--l~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      .|+.+| .+.+.+.+.+.    ..|  +++..++||++.....................+....+.+|+|+.++.++.++
T Consensus       164 ~Y~~sK-~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~  242 (291)
T 3rd5_A          164 AYSQSK-LANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQD  242 (291)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSC
T ss_pred             hHHHHH-HHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCC
Confidence            444443 33444444433    345  99999999965432211110000000000001112346899999999988764


Q ss_pred             ccccCcEEEEecCC
Q 044905          221 AVAENKVVKVFTDP  234 (427)
Q Consensus       221 ~~~~g~~~nI~~~~  234 (427)
                       ...|..+.+.++.
T Consensus       243 -~~~G~~~~vdgG~  255 (291)
T 3rd5_A          243 -LPGDSFVGPRFGY  255 (291)
T ss_dssp             -CCTTCEEEETTSS
T ss_pred             -CCCCceeCCcccc
Confidence             4578888887664

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.74  E-value=5.3e-17  Score=156.23  Aligned_cols=212  Identities=12%  Similarity=0.083  Sum_probs=138.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.++.+......       ...++.++.+|++|.+++.+++   
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~   92 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-------KGLNVEGSVCDLLSRTERDKLMQTV   92 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999998765444322111       0234568999999999888877   


Q ss_pred             -----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           80 -----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        80 -----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||.+.+.+.     .+
T Consensus        93 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~  167 (273)
T 1ae1_A           93 AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----PS  167 (273)
T ss_dssp             HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----TT
T ss_pred             HHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----CC
Confidence                 57999999999754322           34578888888888773    4567899999987643221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce-EEec-------ccccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV-VVSA-------EASVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i-~~~~-------~~~~~~~~~~i~v~  207 (427)
                      .     ..|+.+| .+.+.+.+.+    ...|++++.|+||++........... ....       ...+..  .+.+.+
T Consensus       168 ~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~  239 (273)
T 1ae1_A          168 V-----SLYSASK-GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG--RAGKPQ  239 (273)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC--SCBCHH
T ss_pred             c-----chhHHHH-HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCC--CCcCHH
Confidence            1     1233222 2344444443    35689999999996543211100000 0000       001111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.+++.... ..|..+++.++.
T Consensus       240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          240 EVSALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCccccCcCCCEEEECCCc
Confidence            999999998874332 368899988873

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.74  E-value=1.8e-16  Score=148.56  Aligned_cols=205  Identities=13%  Similarity=0.124  Sum_probs=137.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ++++++||||+|+||++++++|+++|++|++++|+.++...+......      ....++.++.+|++|.+++.++++  
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~v~~~~~~~   74 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ------EQGVEVFYHHLDVSKAESVEEFSKKV   74 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHCCCEEEEECCTTCHHHHHHHCC-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------hcCCeEEEEEeccCCHHHHHHHHHHH
Confidence            367899999999999999999999999999999998766544332110      112456789999999999998876  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|++||++|.....+           .+++|+.++.++++++...   +..++|++||+......     ... 
T Consensus        75 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----~~~-  148 (235)
T 3l77_A           75 LERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI-----PYG-  148 (235)
T ss_dssp             HHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC-----TTC-
T ss_pred             HHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC-----CCc-
Confidence                 6899999999765432           4578888998888887542   34567777666522111     011 


Q ss_pred             ccchhhhhccccccHHHHHHHHh--cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI--ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~--~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                          ..|+.++ .+.+.+.+.+.  ..++++..++||++..........      ....  ..+++.+|+|++++.++++
T Consensus       149 ----~~Y~~sK-aa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~------~~~~--~~~~~p~dva~~v~~l~~~  215 (235)
T 3l77_A          149 ----GGYVSTK-WAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG------KPKE--KGYLKPDEIAEAVRCLLKL  215 (235)
T ss_dssp             ----HHHHHHH-HHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC------CCGG--GTCBCHHHHHHHHHHHHTS
T ss_pred             ----chHHHHH-HHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC------cccc--cCCCCHHHHHHHHHHHHcC
Confidence                1233222 23455554443  568999999999765432211110      0111  1378999999999999987


Q ss_pred             cccccCcEEEEec
Q 044905          220 TAVAENKVVKVFT  232 (427)
Q Consensus       220 ~~~~~g~~~nI~~  232 (427)
                      +..+....+.+..
T Consensus       216 ~~~~~~~~~~~~~  228 (235)
T 3l77_A          216 PKDVRVEELMLRS  228 (235)
T ss_dssp             CTTCCCCEEEECC
T ss_pred             CCCCccceEEEee
Confidence            6554444444433

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.74  E-value=1.3e-17  Score=158.65  Aligned_cols=221  Identities=11%  Similarity=0.126  Sum_probs=141.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+............      .....++.++.+|++|.+++.++++ 
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~------~~~~~~~~~~~~Dl~~~~~~~~~~~~   85 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVG------KEFGVKTKAYQCDVSNTDIVTKTIQQ   85 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHH------HHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHH------HhcCCeeEEEEeeCCCHHHHHHHHHH
Confidence            345689999999999999999999999999999997665432211110      0012356789999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----C-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----G-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            .+|+|||++|.....+           .+++|+.++.++++++...    + .++||++||...+.+.... ..
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~  164 (265)
T 1h5q_A           86 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-LN  164 (265)
T ss_dssp             HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-TT
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc-cc
Confidence                  4899999999765432           3567888888888887543    3 4789999987643221100 00


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ceEEe-cccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NVVVS-AEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i~~~-~~~~~~~~~~~i~v~DVA~~  212 (427)
                      +  ......|+.++ .+.+.+.+.+.    ..|++++++|||.+......... ..... ....+..  .+++.+|+|++
T Consensus       165 ~--~~~~~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~  239 (265)
T 1h5q_A          165 G--SLTQVFYNSSK-AACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLN--RFAQPEEMTGQ  239 (265)
T ss_dssp             E--ECSCHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTS--SCBCGGGGHHH
T ss_pred             c--cccccccHHHH-HHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCccc--CCCCHHHHHHH
Confidence            0  01112343333 33555555443    45899999999966442211100 00000 0001111  37899999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.++.+... ..|..|++.++.
T Consensus       240 ~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          240 AILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhhccCchhcCcCcEEEecCCE
Confidence            9999875432 468899998873

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.74  E-value=9.8e-17  Score=155.26  Aligned_cols=213  Identities=17%  Similarity=0.123  Sum_probs=139.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+. .....+......      ....++.++.+|++|.+++.++++
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~Dv~d~~~v~~~~~   96 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAG------LSSGTVLHHPADMTKPSEIADMMA   96 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHT------TCSSCEEEECCCTTCHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhh------ccCCcEEEEeCCCCCHHHHHHHHH
Confidence            4457899999999999999999999999999999954 344433322111      112456789999999999888775


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||...+.+.     .
T Consensus        97 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  171 (281)
T 3v2h_A           97 MVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS-----P  171 (281)
T ss_dssp             HHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----T
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC-----C
Confidence                   7899999999765432           4567888888888887    45677899999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-cce------E-----E--ecccccCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-YNV------V-----V--SAEASVDAN  200 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-~~i------~-----~--~~~~~~~~~  200 (427)
                      ..     ..|+.+| .+.+.+.+.+    ...|+++..|+||++........ ...      .     .  .....+.. 
T Consensus       172 ~~-----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-  244 (281)
T 3v2h_A          172 FK-----SAYVAAK-HGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK-  244 (281)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTC-
T ss_pred             Cc-----hHHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCC-
Confidence            11     1233222 2344444443    35689999999996543211100 000      0     0  00111111 


Q ss_pred             CCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          201 DYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                       .+++.+|||++++.++++... ..|..+++.++
T Consensus       245 -r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          245 -KFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             -SCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             -CccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence             478999999999999875433 36889999887

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.74  E-value=4.4e-17  Score=155.44  Aligned_cols=215  Identities=13%  Similarity=0.173  Sum_probs=140.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++|+||||+|+||+++++.|+++|++|+++.|+.... ..+......       ...++.++.+|++|.+++.++++  
T Consensus         7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~   79 (264)
T 3i4f_A            7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD-------VEERLQFVQADVTKKEDLHKIVEEA   79 (264)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG-------GGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999998876543 333222111       12467799999999999888876  


Q ss_pred             -----CcCEEEEccCC--CCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGP--TEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~--~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|+|||++|.  ....+           .+++|+.++.++++++    ++.+..+||++||.+.+...      
T Consensus        80 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------  153 (264)
T 3i4f_A           80 MSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP------  153 (264)
T ss_dssp             HHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC------
T ss_pred             HHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC------
Confidence                 78999999994  22111           4577888999998887    66777899999887532111      


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc-eE-EecccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN-VV-VSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~-i~-~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      +.+  ....|+.+| .+.+.+.+.+.    ..|+++..++||++.......... .. ......+..  .+.+.+|||++
T Consensus       154 ~~~--~~~~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--r~~~~~dva~~  228 (264)
T 3i4f_A          154 GWI--YRSAFAAAK-VGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIG--RSGTGEDIART  228 (264)
T ss_dssp             CCT--TCHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC----------CCCCHHHHHHH
T ss_pred             CCC--CCchhHHHH-HHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCC--CCcCHHHHHHH
Confidence            111  112233222 23444444433    468999999999654321111000 00 000011111  36789999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCCCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      ++.+++.... ..|.+|++.++...
T Consensus       229 v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          229 ISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             HHHHcCcccCCCCCcEEEEcCceee
Confidence            9999875433 36899999888533

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.74  E-value=6.6e-17  Score=152.12  Aligned_cols=203  Identities=13%  Similarity=0.131  Sum_probs=136.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      .++|+||||||+||++|++.|+++|+       +|++++|+......+......       ...++.++.+|++|.+++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~   74 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-------EGALTDTITADISDMADVR   74 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-------TTCEEEEEECCTTSHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-------cCCeeeEEEecCCCHHHHH
Confidence            46899999999999999999999999       999999997665544322111       1235678999999999988


Q ss_pred             HHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccC
Q 044905           77 KAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        77 ~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~  134 (427)
                      ++++       ++|+|||++|....++           .+++|+.++.++++++.    +.+.++||++||.+.+.+.  
T Consensus        75 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--  152 (244)
T 2bd0_A           75 RLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF--  152 (244)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--
T ss_pred             HHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC--
Confidence            8875       6999999999764332           45678888888888774    3577899999987743211  


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHH
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                         .+.     ..|+.++ .+.+.+.+.+    ...|++++++|||.+.......   .  ....    ...+++.+|+|
T Consensus       153 ---~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---~--~~~~----~~~~~~~~dva  214 (244)
T 2bd0_A          153 ---RHS-----SIYCMSK-FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---V--DDEM----QALMMMPEDIA  214 (244)
T ss_dssp             ---TTC-----HHHHHHH-HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---C--CSTT----GGGSBCHHHHH
T ss_pred             ---CCC-----chhHHHH-HHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhh---c--cccc----cccCCCHHHHH
Confidence               111     2233332 2345554433    3578999999999554322111   1  0010    12478999999


Q ss_pred             HHHHHHhcCcccc-cCcEEEEecC
Q 044905          211 SLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      ++++.++..+..+ .+.++...++
T Consensus       215 ~~~~~l~~~~~~~~~g~~~~~~~~  238 (244)
T 2bd0_A          215 APVVQAYLQPSRTVVEEIILRPTS  238 (244)
T ss_dssp             HHHHHHHTSCTTEEEEEEEEEETT
T ss_pred             HHHHHHHhCCccccchheEEeccc
Confidence            9999998754332 3444444443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.74  E-value=3.2e-17  Score=155.82  Aligned_cols=213  Identities=10%  Similarity=0.031  Sum_probs=138.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++| +.+....+......       ...++.++.+|++|.+++.++++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-------~~~~~~~~~~D~~~~~~~~~~~~   77 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-------VGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHH
Confidence            34578999999999999999999999999999999 65544443222111       02345689999999999888776


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                             ++|+|||++|.....+           .+++|+.++.++++++..    .+ ..+||++||...+..     .
T Consensus        78 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----~  152 (261)
T 1gee_A           78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----W  152 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----C
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----C
Confidence                   7899999999754322           346777788877776543    45 679999998763211     1


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc--ceEEe--cccccCCCCCcccHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY--NVVVS--AEASVDANDYKVAKSQI  209 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~--~i~~~--~~~~~~~~~~~i~v~DV  209 (427)
                      .+.     ..|+.++ .+.+.+.+.+    ...|++++++|||.+.........  .-...  ....+.  ..+++.+|+
T Consensus       153 ~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dv  224 (261)
T 1gee_A          153 PLF-----VHYAASK-GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM--GYIGEPEEI  224 (261)
T ss_dssp             TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT--SSCBCHHHH
T ss_pred             CCc-----cHHHHHH-HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCC--CCCcCHHHH
Confidence            111     2233222 2344444433    356899999999965432110000  00000  000111  147899999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.++.+... ..|..+++.++.
T Consensus       225 a~~~~~l~~~~~~~~~G~~~~v~gg~  250 (261)
T 1gee_A          225 AAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCccccCCCCcEEEEcCCc
Confidence            9999998874322 368899998874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.74  E-value=4.5e-17  Score=155.17  Aligned_cols=207  Identities=13%  Similarity=0.072  Sum_probs=138.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.+. ..+....           .+ .++.+|++|.+++.++++ 
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----------~~-~~~~~D~~~~~~~~~~~~~   70 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----------GG-AFFQVDLEDERERVRFVEE   70 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----------TC-EEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----------hC-CEEEeeCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999876 4432211           12 488999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.++.++++++..    .+.++||++||.+.+.+.     .+
T Consensus        71 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~  145 (256)
T 2d1y_A           71 AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----QE  145 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----CC
Confidence                  6899999999754322           456788888888887643    567899999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc------cceEEe--cccccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS------YNVVVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~------~~i~~~--~~~~~~~~~~~i~v~  207 (427)
                      .     ..|+.+| .+.+.+.+.+.    ..|++++.++||++........      ..-...  ....+..  .+++.+
T Consensus       146 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  217 (256)
T 2d1y_A          146 N-----AAYNASK-GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR--RLGKPE  217 (256)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS--SCBCHH
T ss_pred             C-----hhHHHHH-HHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCC--CCcCHH
Confidence            1     1233322 23444444433    4689999999996643211000      000000  0001111  478999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.++++... ..|..|++.++.
T Consensus       218 dvA~~~~~l~s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          218 EVAEAVLFLASEKASFITGAILPVDGGM  245 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            999999999875432 368899998885

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.74  E-value=8.2e-17  Score=153.57  Aligned_cols=215  Identities=15%  Similarity=0.106  Sum_probs=138.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+... .+.+......      ....++.++.+|++|.+++.++++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~v~~~~~   75 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA------QHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH------HHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHh------ccCCcEEEEECCCCCHHHHHHHHH
Confidence            456789999999999999999999999999999999875 5444322110      001245688999999999888775


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             ++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||.+.+.+.     .
T Consensus        76 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  150 (260)
T 1x1t_A           76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----A  150 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----T
T ss_pred             HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----C
Confidence                   7999999999754322           45677778888877764    4567899999987642211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc-e----------EEecc-cccCCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN-V----------VVSAE-ASVDANDY  202 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~-i----------~~~~~-~~~~~~~~  202 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|++++.|+||++.......... .          ..... ........
T Consensus       151 ~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  224 (260)
T 1x1t_A          151 NK-----SAYVAAK-HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ  224 (260)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCC
T ss_pred             CC-----chHHHHH-HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCC
Confidence            11     1233322 23444444433    568999999999654321110000 0          00000 00001114


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+.+|+|++++.+++.... ..|..+++.++
T Consensus       225 ~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          225 FVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            78999999999998874322 36888888776

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.74  E-value=8.8e-18  Score=158.94  Aligned_cols=213  Identities=10%  Similarity=0.084  Sum_probs=137.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+ +...+.+......       ...++.++.+|++|.+++.++++ 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   78 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-------DGGDAAFFAADLATSEACQQLVDE   78 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999998 6655544322111       02356789999999999998887 


Q ss_pred             ------CcCEEEEccCC-CCCCC-----------CccccHHHHHHHHHHHHH----cC--C---CeEEEEeccccccccc
Q 044905           81 ------NAGKVVVTIGP-TEDGP-----------TSEVSTSDAFQVIQAAQL----AG--V---GHVAIIYDGNTTAAST  133 (427)
Q Consensus        81 ------g~d~Vi~~ag~-~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g--V---k~~V~vSSs~v~~~~~  133 (427)
                            ++|+|||++|. ....+           .+++|+.++.++++++..    .+  .   .+||++||...+... 
T Consensus        79 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  157 (258)
T 3afn_B           79 FVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-  157 (258)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-
T ss_pred             HHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-
Confidence                  89999999996 33221           346777788888776642    22  2   688888876532100 


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEE-ecccccCCCCCcccHH
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVV-SAEASVDANDYKVAKS  207 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~-~~~~~~~~~~~~i~v~  207 (427)
                         ..+.     ..|+.++ .+.+.+.+.+.    ..|++++++|||.+........ ..+.. .....+..  .+++++
T Consensus       158 ---~~~~-----~~Y~~sK-~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~  226 (258)
T 3afn_B          158 ---GPGA-----GLYGAAK-AFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMG--RFGTAE  226 (258)
T ss_dssp             ---CTTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTC--SCBCGG
T ss_pred             ---CCCc-----hHHHHHH-HHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCC--cCCCHH
Confidence               0111     1233332 33455554443    4589999999996543211110 00000 00011111  478999


Q ss_pred             HHHHHHHHHhcCccc--ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV--AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~--~~g~~~nI~~~~  234 (427)
                      |+|++++.++.+...  ..|+.|++.++.
T Consensus       227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          227 EMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            999999998874322  258899998874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.74  E-value=1.5e-17  Score=160.40  Aligned_cols=212  Identities=18%  Similarity=0.171  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++  
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~   93 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-------AGVEADGRTCDVRSVPEIEALVAAV   93 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999998765444322110       01345689999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc------CCCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA------GVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~------gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++...      +.++||++||.+.+.+.     .
T Consensus        94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~  168 (277)
T 2rhc_B           94 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-----V  168 (277)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-----T
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-----C
Confidence                 6899999999754322           4567888988998886554      66899999987632111     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc------------cceEE-ecccccCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS------------YNVVV-SAEASVDAND  201 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~------------~~i~~-~~~~~~~~~~  201 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..|+++++|+||++........            ..... .....+..  
T Consensus       169 ~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--  240 (277)
T 2rhc_B          169 HA-----APYSASK-HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG--  240 (277)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTS--
T ss_pred             CC-----ccHHHHH-HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCC--
Confidence            11     1233222 23444444433    5689999999996643211000            00000 00001111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++.+|||++++.+++++.. ..|..|++.++.
T Consensus       241 r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          241 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            378999999999999875432 368899998873

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.74  E-value=1.5e-16  Score=152.40  Aligned_cols=204  Identities=15%  Similarity=0.100  Sum_probs=135.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+... .+...+             +.++.+|++|.+++.++++ 
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~Dv~~~~~v~~~~~~   92 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-------------AVALYGDFSCETGIMAFIDL   92 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-------------CEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-------------CeEEECCCCCHHHHHHHHHH
Confidence            3467999999999999999999999999999999987642 232222             3589999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            ++|+|||++|......          .+++|+.++.++++++..    .+..+||++||...+.+.     .+.
T Consensus        93 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~  167 (260)
T 3gem_A           93 LKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-----SKH  167 (260)
T ss_dssp             HHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-----SSC
T ss_pred             HHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-----CCc
Confidence                  6899999999754322          456788888888887743    467899999987632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEe-cccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVS-AEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~-~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           ..|+.+| .+.+.+.+.+.   ..++++..|+||++...... ....... ....+..  .+.+.+|||++++.+
T Consensus       168 -----~~Y~asK-aa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~-~~~~~~~~~~~~p~~--r~~~~edva~~v~~L  238 (260)
T 3gem_A          168 -----IAYCATK-AGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD-DAAYRANALAKSALG--IEPGAEVIYQSLRYL  238 (260)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------CCSC--CCCCTHHHHHHHHHH
T ss_pred             -----HhHHHHH-HHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC-CHHHHHHHHhcCCCC--CCCCHHHHHHHHHHH
Confidence                 1233222 23444444443   23699999999966432110 0000000 0011111  256799999999998


Q ss_pred             hcCcccccCcEEEEecCC
Q 044905          217 FSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~~  234 (427)
                      +.. ....|..|++.++.
T Consensus       239 ~~~-~~itG~~i~vdGG~  255 (260)
T 3gem_A          239 LDS-TYVTGTTLTVNGGR  255 (260)
T ss_dssp             HHC-SSCCSCEEEESTTT
T ss_pred             hhC-CCCCCCEEEECCCc
Confidence            853 34578999998885

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.73  E-value=8.6e-17  Score=154.67  Aligned_cols=211  Identities=16%  Similarity=0.132  Sum_probs=139.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+. .....+......       ...++.++.+|++|.+++.++++ 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~d~~~v~~~~~~   99 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-------AGGEAFAVKADVSQESEVEALFAA   99 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHH
Confidence            356899999999999999999999999999999854 333433322111       12356689999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+...+.     .+
T Consensus       100 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  174 (269)
T 4dmm_A          100 VIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN-----PG  174 (269)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----CC
Confidence                  7899999999765432           4567888888888876    34567899999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      ..     .|+.+| .+.+.+.+.+    ...|+++..|+||++..........-.. ....+..  .+.+.+|||++++.
T Consensus       175 ~~-----~Y~asK-~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~p~~--r~~~~~dvA~~v~~  245 (269)
T 4dmm_A          175 QA-----NYSAAK-AGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKL-LEVIPLG--RYGEAAEVAGVVRF  245 (269)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHH-GGGCTTS--SCBCHHHHHHHHHH
T ss_pred             ch-----hHHHHH-HHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHH-HhcCCCC--CCCCHHHHHHHHHH
Confidence            11     233222 2234444333    3568999999999665432211000000 0111111  37799999999999


Q ss_pred             HhcCcc--cccCcEEEEecCC
Q 044905          216 VFSNTA--VAENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~--~~~g~~~nI~~~~  234 (427)
                      +++++.  -..|.+|++.++.
T Consensus       246 l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          246 LAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             HHHCGGGGGCCSCEEEESTTS
T ss_pred             HhCCcccCCCcCCEEEECCCe
Confidence            998632  2358999998874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.73  E-value=3.5e-17  Score=158.01  Aligned_cols=229  Identities=15%  Similarity=0.132  Sum_probs=147.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+....+.......    .....++.++.+|++|.+++.++++  
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL----GANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----CCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----CCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987655443321110    0001256789999999998888775  


Q ss_pred             -----CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|++||++|... ..+           .+++|+.++.++++++..    .+-.+||++||.+.+.+.     .+
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  160 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-----RW  160 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----TT
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC-----CC
Confidence                 6799999999632 211           456888899999887755    344589999987643221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc---cceEE-ecccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS---YNVVV-SAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~---~~i~~-~~~~~~~~~~~~i~v~DVA~  211 (427)
                      ..     .|+.+| .+.+.+.+.+    ...|+++..++||++........   ..... .....+..  .+.+.+|||+
T Consensus       161 ~~-----~Y~asK-~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~--r~~~~~dva~  232 (281)
T 3svt_A          161 FG-----AYGVTK-SAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLP--RQGEVEDVAN  232 (281)
T ss_dssp             CT-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSS--SCBCHHHHHH
T ss_pred             Ch-----hHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCC--CCCCHHHHHH
Confidence            12     232222 2344444443    35689999999997654211000   00000 00011111  3678999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCCCCC-hhhHHHHHHHH
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDPSAP-ARRVDELFSAI  248 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~~~~-~~s~~ell~~i  248 (427)
                      +++.++++... ..|..|++.++.... ...+.+++..+
T Consensus       233 ~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~  271 (281)
T 3svt_A          233 MAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPV  271 (281)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHH
T ss_pred             HHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccc
Confidence            99999875433 368999998886433 23344444444

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.73  E-value=4.4e-17  Score=156.44  Aligned_cols=214  Identities=15%  Similarity=0.118  Sum_probs=140.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+......+......      ....++.++.+|++|.+++.++++ 
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE------KYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------hcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999998765444321100      001245678999999998887775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++.    +.+.++||++||.++...       +
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-------~  165 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-------T  165 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-------C
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-------C
Confidence                  7899999999765432           34578888888877763    456789999998762111       0


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc--ceEEec--ccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY--NVVVSA--EASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~--~i~~~~--~~~~~~~~~~i~v~DVA~  211 (427)
                      .+..  ..|+.+| .+.+.+.+.+.    ..|+++++|+||++.........  .-....  ...+..  .+.+.+|||+
T Consensus       166 ~~~~--~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--~~~~p~dvA~  240 (267)
T 1vl8_A          166 MPNI--SAYAASK-GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG--RTGVPEDLKG  240 (267)
T ss_dssp             SSSC--HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS--SCBCGGGGHH
T ss_pred             CCCC--hhHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCC--CCcCHHHHHH
Confidence            1111  1233222 23444444433    46899999999966542211000  000000  001111  3789999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++.+++.... ..|..+.+.++
T Consensus       241 ~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          241 VAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHcCccccCCcCCeEEECCC
Confidence            99998875433 36888888776

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.73  E-value=1.4e-16  Score=153.00  Aligned_cols=212  Identities=15%  Similarity=0.119  Sum_probs=137.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|+++.|+... .+.+......       ...++.++.+|++|.+++.++++ 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-------KGYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCceEEEECCCCCHHHHHHHHHH
Confidence            45689999999999999999999999999999996543 3333221111       12356789999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++.    +.+..+||++||.....+.     .+
T Consensus       101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  175 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN-----MG  175 (271)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TT
T ss_pred             HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----CC
Confidence                  7899999999765432           45677778877777664    4567899999887632111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.++ .+.+.+.+.+.    ..|+++..++||++..........-....  ...+..  .+.+.+|+|+++
T Consensus       176 ~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~p~dvA~~i  247 (271)
T 4iin_A          176 QT-----NYSASK-GGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLN--RLGSAKEVAEAV  247 (271)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTC--SCBCHHHHHHHH
T ss_pred             ch-----HhHHHH-HHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcC--CCcCHHHHHHHH
Confidence            11     232222 23444444333    57899999999966543211111100000  111111  377999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++++... ..|..+++.++.
T Consensus       248 ~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          248 AFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCCcCCEEEeCCCe
Confidence            999875432 468999998873

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=8.6e-18  Score=157.49  Aligned_cols=201  Identities=16%  Similarity=0.104  Sum_probs=135.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||||+||++|++.|+++|++|++++|+.. ..                  ++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~------------------~~~~~~~D~~~~~~~~~~~~~~~   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GE------------------DLIYVEGDVTREEDVRRAVARAQ   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SS------------------SSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-cc------------------ceEEEeCCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999875 11                  12489999999999998887   


Q ss_pred             ---CcCEEEEccCCCCCCC---------------CccccHHHHHHHHHHHHHcC----------CCeEEEEecccccccc
Q 044905           81 ---NAGKVVVTIGPTEDGP---------------TSEVSTSDAFQVIQAAQLAG----------VGHVAIIYDGNTTAAS  132 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~---------------~~~vn~~~~~~ll~Aa~~~g----------Vk~~V~vSSs~v~~~~  132 (427)
                         ++|++||++|......               .+++|+.++.++++++....          ..+||++||.+.+.+.
T Consensus        63 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  142 (242)
T 1uay_A           63 EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  142 (242)
T ss_dssp             HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC
Confidence               7899999999754321               23577888899998887542          1289999887643221


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccH
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAK  206 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v  206 (427)
                           .+..     .|+.++ .+.+.+.+.+    ...|++++++|||++..............  ....+.. ..+++.
T Consensus       143 -----~~~~-----~Y~~sK-~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~  210 (242)
T 1uay_A          143 -----IGQA-----AYAASK-GGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFP-PRLGRP  210 (242)
T ss_dssp             -----TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSS-CSCCCH
T ss_pred             -----CCCc-----hhhHHH-HHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCc-ccCCCH
Confidence                 1111     232222 2344444433    34689999999996543111000000000  0011110 137899


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecCCCC
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~~~~  236 (427)
                      +|+|++++.++.+ ....|+.|++.++...
T Consensus       211 ~dva~~~~~l~~~-~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          211 EEYAALVLHILEN-PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             HHHHHHHHHHHHC-TTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHHhcC-CCCCCcEEEEcCCeec
Confidence            9999999999976 3457899999888633

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.73  E-value=2.2e-16  Score=150.28  Aligned_cols=202  Identities=15%  Similarity=0.191  Sum_probs=127.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.++++.+......       ...++.++.+|++|.+++.++++  
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-------AGGRIVARSLDARNEDEVTAFLNAA   78 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEECcCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998876655432211       02356789999999999988886  


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+...+.     .+..
T Consensus        79 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  153 (252)
T 3h7a_A           79 DAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-----SGFA  153 (252)
T ss_dssp             HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC-----TTCH
T ss_pred             HhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC-----CCCc
Confidence                6799999999765433           4567777888877766    44566799999987632111     1111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeE-EEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSY-TFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~-tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           .|+.+| .+.+.+.+.+    ...|+++ ..+.||++..........-.. .......+..+.+.+|+|++++.+
T Consensus       154 -----~Y~asK-aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~pedvA~~~~~l  226 (252)
T 3h7a_A          154 -----AFASAK-FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF-GKDALANPDLLMPPAAVAGAYWQL  226 (252)
T ss_dssp             -----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHH
T ss_pred             -----cHHHHH-HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh-hhhhhcCCccCCCHHHHHHHHHHH
Confidence                 232222 2234444333    3568999 899999654322111000000 000111122378999999999999


Q ss_pred             hcCcccc
Q 044905          217 FSNTAVA  223 (427)
Q Consensus       217 l~~~~~~  223 (427)
                      ++++...
T Consensus       227 ~s~~~~~  233 (252)
T 3h7a_A          227 YQQPKSA  233 (252)
T ss_dssp             HHCCGGG
T ss_pred             HhCchhc
Confidence            9865443

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.73  E-value=6.1e-17  Score=157.91  Aligned_cols=216  Identities=15%  Similarity=0.105  Sum_probs=143.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+...+..+......      ....++.++.+|++|.+++.++++  
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE------LGAGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT------SSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh------hCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999998876655432211      011356789999999988877664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||...... .   ..+.
T Consensus       114 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~-~---~~~~  189 (293)
T 3rih_A          114 VDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT-G---YPGW  189 (293)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB-B---CTTC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC-C---CCCC
Confidence                 6799999999765432           4578888999988887    4667889999998762100 0   0111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v~  214 (427)
                           ..|+.+| .+.+.+.+.+    ...|+++..|+||++..........-....  ...+..  .+.+.+|||++++
T Consensus       190 -----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--r~~~p~dvA~~v~  261 (293)
T 3rih_A          190 -----SHYGASK-AAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMG--MLGSPVDIGHLAA  261 (293)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTS--SCBCHHHHHHHHH
T ss_pred             -----HHHHHHH-HHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCC--CCCCHHHHHHHHH
Confidence                 2233322 2344444433    356899999999976542110000000000  011111  2568999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCCCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      .+++.... ..|.+|++.++...
T Consensus       262 fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          262 FLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEECCCccC
Confidence            98874433 36899999888643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.73  E-value=3.3e-17  Score=157.55  Aligned_cols=214  Identities=12%  Similarity=0.089  Sum_probs=140.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+......+......       ...++.++.+|++|.+++.++++.
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~~  104 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-------YGVHSKAYKCNISDPKSVEETISQ  104 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH-------HCSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcceEEEeecCCHHHHHHHHHH
Confidence            4557899999999999999999999999999999998765444322111       023566899999999998887754


Q ss_pred             -------cCEEEEccCCCCC-CC------------CccccHHH----HHHHHHHHHHcCCCeEEEEecccccccccCCCC
Q 044905           82 -------AGKVVVTIGPTED-GP------------TSEVSTSD----AFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        82 -------~d~Vi~~ag~~~~-~~------------~~~vn~~~----~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             +|+|||++|.... ++            .+++|+.+    +.+++..+++.+.++||++||.+.+.+.     
T Consensus       105 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  179 (279)
T 3ctm_A          105 QEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN-----  179 (279)
T ss_dssp             HHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------
T ss_pred             HHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC-----
Confidence                   8999999986543 21            23466667    4567777777888999999987632210     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc-ceEEe-cccccCCCCCcccHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY-NVVVS-AEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~-~i~~~-~~~~~~~~~~~i~v~DVA~  211 (427)
                       ..+  ....|+.++ .+.+.+.+.+.    ..+ +++.++||++......... ..... ....+..  .+++.+|+|+
T Consensus       180 -~~~--~~~~Y~~sK-~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~  252 (279)
T 3ctm_A          180 -IPQ--LQAPYNTAK-AACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLG--REGLTQELVG  252 (279)
T ss_dssp             ---C--CHHHHHHHH-HHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTC--SCBCGGGTHH
T ss_pred             -CCC--CcccHHHHH-HHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCcc--CCcCHHHHHH
Confidence             011  112333333 34555555544    357 9999999965443221100 00000 0001111  3789999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+++.... ..|..+++.++.
T Consensus       253 ~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          253 GYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCccccCccCCEEEECCCe
Confidence            99999875322 468899998874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.73  E-value=4.1e-17  Score=155.22  Aligned_cols=213  Identities=15%  Similarity=0.066  Sum_probs=136.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+..  ..+......       ...++.++.+|++|.+++.++++ 
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~-------~~~~~~~~~~D~~~~~~v~~~~~~   72 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR-------HGVKAVHHPADLSDVAQIEALFAL   72 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT-------TSCCEEEECCCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh-------cCCceEEEeCCCCCHHHHHHHHHH
Confidence            45689999999999999999999999999999999876  222111000       01245678899999999998887 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++    .+++.+.++||++||.+.+.+.     .+
T Consensus        73 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  147 (255)
T 2q2v_A           73 AEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----TG  147 (255)
T ss_dssp             HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----CC
Confidence                  8999999999754322           34566665555554    4466778899999987643211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc----ceE--E----ecc-cccCCCCCcc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY----NVV--V----SAE-ASVDANDYKV  204 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~----~i~--~----~~~-~~~~~~~~~i  204 (427)
                      .     ..|+.++ .+.+.+.+.+.    ..|+++++|+||++.........    ...  .    ... ........++
T Consensus       148 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  221 (255)
T 2q2v_A          148 K-----AAYVAAK-HGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFV  221 (255)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCB
T ss_pred             c-----hhHHHHH-HHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCc
Confidence            1     1233222 23444444443    46899999999966432110000    000  0    000 0001111478


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+|||++++.++..... ..|..|++.++.
T Consensus       222 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          222 TPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            999999999998875433 358899998773

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.73  E-value=6.3e-17  Score=154.59  Aligned_cols=212  Identities=14%  Similarity=0.121  Sum_probs=141.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.++++||||+|+||+++++.|+++|++|+++ .|+......+......       ...++.++.+|++|.+++.++++ 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~   75 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-------LGVKVLVVKANVGQPAKIKEMFQQ   75 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999987 7877655544332111       12356789999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            +.|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+.+..     ..+
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-----~~~  150 (258)
T 3oid_A           76 IDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY-----LEN  150 (258)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-----CTT
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-----CCC
Confidence                  5699999999654432           4577888888888877    4456679999998763211     111


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc---eEE-ecccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN---VVV-SAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~---i~~-~~~~~~~~~~~~i~v~DVA~  211 (427)
                      .     ..|+.+| .+.+.+.+.+.    ..|+++..++||++..........   ... .....+..  .+.+.+|||+
T Consensus       151 ~-----~~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~~~dva~  222 (258)
T 3oid_A          151 Y-----TTVGVSK-AALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAG--RMVEIKDMVD  222 (258)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTS--SCBCHHHHHH
T ss_pred             c-----HHHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCC--CCcCHHHHHH
Confidence            1     2233222 23445544443    458999999999665421110000   000 00011111  3789999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.++++... ..|..+++.++.
T Consensus       223 ~v~~L~s~~~~~itG~~i~vdGG~  246 (258)
T 3oid_A          223 TVEFLVSSKADMIRGQTIIVDGGR  246 (258)
T ss_dssp             HHHHHTSSTTTTCCSCEEEESTTG
T ss_pred             HHHHHhCcccCCccCCEEEECCCc
Confidence            99999875433 468999998885

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.73  E-value=1.6e-16  Score=153.27  Aligned_cols=210  Identities=14%  Similarity=0.138  Sum_probs=135.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN---   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g---   81 (427)
                      ++++||||+|+||+++++.|+++|++|++++|+.++++.+......        ..++.++.+|++|.+++.++++.   
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--------KTRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT--------TSCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--------CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999998765554332110        13556899999999999998865   


Q ss_pred             ----cCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCC-eEEEEecccccccccCCCCCCC
Q 044905           82 ----AGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVG-HVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        82 ----~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk-~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          +|+|||++|.... .+           .+++|+.++.++++++    ++.+.. +||++||...+.+        .
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~--------~  165 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP--------Y  165 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC--------C
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC--------C
Confidence                5999999997542 22           4566777877766655    455677 9999998763211        1


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      +..  ..|+.+| .+.+.+.+.+.    ..|++++.|+||++..........-.............+++.+|||++++.+
T Consensus       166 ~~~--~~Y~asK-aa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l  242 (272)
T 2nwq_A          166 PGS--HVYGGTK-AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWI  242 (272)
T ss_dssp             TTC--HHHHHHH-HHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHHH
T ss_pred             CCC--chHHHHH-HHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHH
Confidence            111  2233332 33566665554    3589999999996643211100000000000001111357999999999999


Q ss_pred             hcCcccccCcEEEEecC
Q 044905          217 FSNTAVAENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~  233 (427)
                      ++.+....+..+.+.++
T Consensus       243 ~s~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          243 MNQPAHLNINSLEIMPV  259 (272)
T ss_dssp             HTSCTTEEEEEEEEEET
T ss_pred             hCCCccCccceEEEeec
Confidence            98654456677777655

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.73  E-value=2.6e-16  Score=151.73  Aligned_cols=214  Identities=9%  Similarity=0.046  Sum_probs=140.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc------------hHHHHHHHHhhhhhhhhhhhccceEEEecCC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG------------AAQELARLAASYKILSKEELKRLNAVESNFD   70 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~------------~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~   70 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+..            ....+......       ...++.++.+|++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~   81 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK-------TGRRCISAKVDVK   81 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh-------cCCeEEEEeCCCC
Confidence            4578999999999999999999999999999999732            22222111110       1245678999999


Q ss_pred             CHHHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccc
Q 044905           71 SAESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNT  128 (427)
Q Consensus        71 D~~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v  128 (427)
                      |.+++.++++       ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||...
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  161 (281)
T 3s55_A           82 DRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLG  161 (281)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            9999888775       7999999999765322           4568888999988885    4456789999998763


Q ss_pred             cccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc---cceE----Eecc---
Q 044905          129 TAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS---YNVV----VSAE---  194 (427)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~---~~i~----~~~~---  194 (427)
                      +.+.     .+.     ..|+.+| .+.+.+.+.+.    ..|+++..|+||.+........   ..+.    ....   
T Consensus       162 ~~~~-----~~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  230 (281)
T 3s55_A          162 HSAN-----FAQ-----ASYVSSK-WGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDV  230 (281)
T ss_dssp             GSCC-----TTC-----HHHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHH
T ss_pred             cCCC-----CCC-----chhHHHH-HHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHH
Confidence            2211     111     1233222 23444544443    4689999999996543221100   0000    0000   


Q ss_pred             -----cccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          195 -----ASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       195 -----~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                           .....+..+.+.+|||++++.++++... ..|.+|++.++.
T Consensus       231 ~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  276 (281)
T 3s55_A          231 ESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGA  276 (281)
T ss_dssp             HHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence                 0000112478999999999999875433 358999998885

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.73  E-value=2e-16  Score=151.71  Aligned_cols=214  Identities=14%  Similarity=0.134  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+.. ....+......       ...++.++.+|++|.+++.++++ 
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~   96 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-------AGRDFKAYAVDVADFESCERCAEK   96 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-------TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHH
Confidence            4567999999999999999999999999999985443 33332221111       12467799999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++..    .+..+||++||...+.+.     .+
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  171 (269)
T 3gk3_A           97 VLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGA-----FG  171 (269)
T ss_dssp             HHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TT
T ss_pred             HHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCC-----CC
Confidence                  7999999999765322           456788888888877643    566799999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe-cccccCCCCCcccHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS-AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~-~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      .     ..|+.+| .+.+.+.+.+    ...|+++..++||++..........-... ..........+.+.+|+|++++
T Consensus       172 ~-----~~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~  245 (269)
T 3gk3_A          172 Q-----ANYASAK-AGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIA  245 (269)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHH
T ss_pred             c-----chHHHHH-HHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHH
Confidence            1     1233222 2234444433    35689999999996654322111110000 0000011113678999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++.... ..|..|++.++.
T Consensus       246 ~L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          246 FLCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             HHTSTTCTTCCSCEEEESTTS
T ss_pred             HHhCCCcCCeeCcEEEECCCE
Confidence            99875432 468999998875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.73  E-value=8.6e-17  Score=152.65  Aligned_cols=202  Identities=14%  Similarity=0.122  Sum_probs=132.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.+..    .             ..+.++.+|++|.+++.++++  
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~----~-------------~~~~~~~~D~~d~~~~~~~~~~~   68 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE----Q-------------YPFATEVMDVADAAQVAQVCQRL   68 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS----C-------------CSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh----c-------------CCceEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987520    0             013588999999999988875  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|....++           .+++|+.++.++++++    ++.+..+||++||.+.+...     .+.
T Consensus        69 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~  143 (250)
T 2fwm_X           69 LAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-----IGM  143 (250)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----TTC
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----CCC
Confidence                 7899999999754322           4567888888888877    45678899999987642211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc--c-ce---EEecc------cccCCCCCcc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS--Y-NV---VVSAE------ASVDANDYKV  204 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~--~-~i---~~~~~------~~~~~~~~~i  204 (427)
                           ..|+.+| .+.+.+.+.+.    ..|+++++|+||++........  . ..   .+...      ..+..  .+.
T Consensus       144 -----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~  215 (250)
T 2fwm_X          144 -----SAYGASK-AALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLG--KIA  215 (250)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------
T ss_pred             -----chHHHHH-HHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCC--CCc
Confidence                 1233222 23455544443    4689999999995543211000  0 00   00000      01111  367


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+|||++++.++++... ..|..+.+.++.
T Consensus       216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          216 RPQEIANTILFLASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999999999875432 368899988874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.73  E-value=9.2e-17  Score=153.97  Aligned_cols=209  Identities=15%  Similarity=0.074  Sum_probs=142.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|++++|+.+....+....          ..++.++.+|++|.+++.++++ 
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~   73 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----------EAEAIAVVADVSDPKAVEAVFAE   73 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----------CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------cCceEEEEcCCCCHHHHHHHHHH
Confidence            45679999999999999999999999999999999986655443211          1345689999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            .+|++||++|....++           .+++|+.++.++++++...-  ..+||++||.+.+ +.         
T Consensus        74 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~---------  143 (263)
T 2a4k_A           74 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA---------  143 (263)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH---------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC---------
Confidence                  4799999999654322           45688889999999987653  4589999988743 11         


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                       .....|+.+| .+.+.+.+.+    ...|+++++|+||++..........-...  ....+..  .+.+.+|+|++++.
T Consensus       144 -~~~~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--~~~~p~dvA~~v~~  219 (263)
T 2a4k_A          144 -FGLAHYAAGK-LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLG--RAGRPEEVAQAALF  219 (263)
T ss_dssp             -HHHHHHHHCS-SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTC--SCBCHHHHHHHHHH
T ss_pred             -CCcHHHHHHH-HHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCC--CCcCHHHHHHHHHH
Confidence             1122344443 3344444443    35789999999996644211110000000  0001111  37899999999999


Q ss_pred             HhcCccc-ccCcEEEEecCC
Q 044905          216 VFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.... ..|..+++.++.
T Consensus       220 l~s~~~~~~tG~~i~vdgG~  239 (263)
T 2a4k_A          220 LLSEESAYITGQALYVDGGR  239 (263)
T ss_dssp             HHSGGGTTCCSCEEEESTTT
T ss_pred             HhCccccCCcCCEEEECCCc
Confidence            9875432 368889998875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.73  E-value=5.2e-17  Score=156.94  Aligned_cols=211  Identities=16%  Similarity=0.203  Sum_probs=141.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||+|+||+++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++.++++   
T Consensus        24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~~   96 (279)
T 3sju_A           24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-------AGHDVDGSSCDVTSTDEVHAAVAAAV   96 (279)
T ss_dssp             -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-------TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999998766554332111       12356789999999998887765   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH------cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL------AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~------~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                          ++|+|||++|.....+           .+++|+.++.++++++..      .+..+||++||.+.+.+.     .+
T Consensus        97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~-----~~  171 (279)
T 3sju_A           97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV-----MY  171 (279)
T ss_dssp             HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC-----TT
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC-----CC
Confidence                6899999999765432           456888899999888754      567799999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-------cceEEe------cccccCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-------YNVVVS------AEASVDANDY  202 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-------~~i~~~------~~~~~~~~~~  202 (427)
                      .     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++........       ......      ....+..  .
T Consensus       172 ~-----~~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r  243 (279)
T 3sju_A          172 A-----APYTASK-HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLG--R  243 (279)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTS--S
T ss_pred             C-----hhHHHHH-HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCC--C
Confidence            1     1233222 23444444433    4689999999997643211000       000000      0011111  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+.+|||++++.++++... ..|..+++.++.
T Consensus       244 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          244 YSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             CBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             CCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            67999999999999875433 468899998874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.73  E-value=1.3e-16  Score=155.32  Aligned_cols=219  Identities=14%  Similarity=0.092  Sum_probs=139.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+.+....+.......  .......++.++.+|++|.+++.++++ 
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQAN--LPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--SCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--ccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            44578999999999999999999999999999999987654443221100  000012356789999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++..    .+..+||++||.+. .+.     ..
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~-----~~  167 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGF-----PL  167 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-TCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc-cCC-----Cc
Confidence                  5899999999654321           457888899999998765    24578999988762 111     01


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCC-CCCccc---eEEecccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFS-PESSYN---VVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~-~~~~~~---i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      ..     .|+..+ .+.+.+.+.+    ...|+++++||||.+.... ......   -.............+.+.+|+|+
T Consensus       168 ~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  241 (303)
T 1yxm_A          168 AV-----HSGAAR-AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSS  241 (303)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHH
T ss_pred             ch-----hhHHHH-HHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHH
Confidence            11     222111 1233333333    3458999999999554321 000000   00000000001113789999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+++.... ..|..+++.++.
T Consensus       242 ~i~~l~~~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          242 VVCFLLSPAASFITGQSVDVDGGR  265 (303)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCcccccCCCcEEEECCCe
Confidence            99999875332 368899998885

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.72  E-value=6.5e-17  Score=153.92  Aligned_cols=211  Identities=15%  Similarity=0.120  Sum_probs=138.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||||+||+++++.|+++|++|++++|+....+.+......       ...++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~~   74 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-------AGGHAVAVKVDVSDRDQVFAAVEQAR   74 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999998765544322111       01345689999999999988876   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          ++|+|||++|.....+           .+++|+.++.++++++..    .+ ..+||++||...+.+.     .+.
T Consensus        75 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  149 (256)
T 1geg_A           75 KTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----PEL  149 (256)
T ss_dssp             HHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----TTB
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----CCc
Confidence                7999999999754322           356777777777766643    45 6799999887632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-----------cceEEe--cccccCCCCCc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-----------YNVVVS--AEASVDANDYK  203 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-----------~~i~~~--~~~~~~~~~~~  203 (427)
                           ..|+.++ .+.+.+.+.+    ...|++++.|+||++........           ..-...  ....+..  .+
T Consensus       150 -----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~  221 (256)
T 1geg_A          150 -----AVYSSSK-FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG--RL  221 (256)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC--SC
T ss_pred             -----hhHHHHH-HHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCC--CC
Confidence                 1233222 2344444443    35689999999996643211000           000000  0001111  37


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+.+|||++++.+++.... ..|..+.+.++.
T Consensus       222 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          222 SEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            8999999999999875433 368888888774

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.72  E-value=3.9e-17  Score=157.27  Aligned_cols=213  Identities=15%  Similarity=0.091  Sum_probs=141.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+...++.+......       ...++..+.+|++|.+++.++++ 
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~   98 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ-------AGLEGRGAVLNVNDATAVDALVES   98 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-------HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEEeCCCHHHHHHHHHH
Confidence            3456899999999999999999999999999999998765554332111       02345689999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||.+.+.+.     .+
T Consensus        99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  173 (270)
T 3ftp_A           99 TLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN-----PG  173 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----CC
Confidence                  7899999999765422           45788889999888774    3456789999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-e-EEecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-V-VVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i-~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.+| .+.+.+.+.+    ...|+++..|+||++.......... . .......+..  .+.+.+|||+++
T Consensus       174 ~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA~~v  245 (270)
T 3ftp_A          174 QV-----NYAAAK-AGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLG--RLGSPEDIAHAV  245 (270)
T ss_dssp             BH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTC--SCBCHHHHHHHH
T ss_pred             ch-----hHHHHH-HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCC--CCCCHHHHHHHH
Confidence            11     233222 2234444433    3568999999999765421100000 0 0000111111  367999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+++.... ..|.+|++.++.
T Consensus       246 ~~L~s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          246 AFLASPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCCcCCccCcEEEECCCc
Confidence            998864332 368999998874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.72  E-value=2.4e-16  Score=149.64  Aligned_cols=208  Identities=17%  Similarity=0.132  Sum_probs=135.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.++.+....          ..++.++.+|++|.+++.++++    
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~   70 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----------GDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999987655443211          1245689999999999998875    


Q ss_pred             ---CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         ++|++||++|... ..+           .+++|+.++.++++++.    +.+..+||++||.+.+.+.     .+. 
T Consensus        71 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~-  144 (248)
T 3asu_A           71 EWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-----AGG-  144 (248)
T ss_dssp             TTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----TTC-
T ss_pred             hCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-----CCC-
Confidence               6899999999752 111           45678888888887775    4577899999987632110     111 


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCC-CCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTE-DFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~-~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                          ..|+.+| .+.+.+.+.+.    ..|++++.|+||++. .........-.............+++.+|+|++++.+
T Consensus       145 ----~~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l  219 (248)
T 3asu_A          145 ----NVYGATK-AFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWV  219 (248)
T ss_dssp             ----HHHHHHH-HHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHHH
T ss_pred             ----chHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHH
Confidence                2333332 23455554443    468999999999765 3211100000000000001111357999999999999


Q ss_pred             hcCcccccCcEEEEecC
Q 044905          217 FSNTAVAENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~  233 (427)
                      ++++....+..+.+...
T Consensus       220 ~s~~~~~~g~~i~v~~~  236 (248)
T 3asu_A          220 STLPAHVNINTLEMMPV  236 (248)
T ss_dssp             HHSCTTCCCCEEEECCT
T ss_pred             hcCCccceeeEEEEccc
Confidence            98655556777777654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.72  E-value=7.8e-17  Score=155.70  Aligned_cols=211  Identities=13%  Similarity=0.091  Sum_probs=141.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++.++++  
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----------GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987665553321          1345689999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||...+.+.     .+.
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  170 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-----ADR  170 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----TTB
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----CCC
Confidence                 7899999999754322           44578888888888774    3456799999987642211     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCC-CCCc---cc-eEE---ecccccCCCCCcccHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFS-PESS---YN-VVV---SAEASVDANDYKVAKSQ  208 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~-~~~~---~~-i~~---~~~~~~~~~~~~i~v~D  208 (427)
                           ..|+.+| .+.+.+.+.+    ...|+++..|+||++.... ....   .. ...   .....+..  .+.+.+|
T Consensus       171 -----~~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~ped  242 (277)
T 4dqx_A          171 -----TAYVASK-GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMD--RMGTAEE  242 (277)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTC--SCBCHHH
T ss_pred             -----hhHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCccc--CCcCHHH
Confidence                 1233222 2344444443    3568999999999765421 0000   00 000   00111111  3678999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCCCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      ||++++.++++... ..|..+++.++...
T Consensus       243 vA~~v~~L~s~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          243 IAEAMLFLASDRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESSSSSS
T ss_pred             HHHHHHHHhCCccCCCcCCEEEECCchhh
Confidence            99999999875433 36899999888643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.72  E-value=4e-17  Score=156.86  Aligned_cols=209  Identities=15%  Similarity=0.096  Sum_probs=135.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+..++..+....          ..++.++.+|++|.+++.++++  
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----------GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceEEEEeecCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987665543211          1345689999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++    ++.+..+||++||...+.+.        
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~--------  167 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN--------  167 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC--------------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC--------
Confidence                 7999999999765322           4567888866666554    45677899999987632211        


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +  ....|+.+| .+.+.+.+.+    ...|+++..|+||++..........-...  ....+..  .+.+.+|||++++
T Consensus       168 ~--~~~~Y~asK-aa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--r~~~~edvA~~v~  242 (266)
T 3grp_A          168 P--GQTNYCAAK-AGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMK--RMGIGEEIAFATV  242 (266)
T ss_dssp             ---CHHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTC--SCBCHHHHHHHHH
T ss_pred             C--CchhHHHHH-HHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            1  112233322 2234444433    35689999999997654211000000000  0111111  3678999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|.++++.++.
T Consensus       243 ~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          243 YLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCccccCccCCEEEECCCe
Confidence            98875433 368899998873

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.72  E-value=1.2e-16  Score=153.04  Aligned_cols=215  Identities=12%  Similarity=0.046  Sum_probs=138.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.++...+......     .....++.++.+|++|.+++.++++ 
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~v~~~~~~   85 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-----TAPDAEVLTTVADVSDEAQVEAYVTA   85 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----HCTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----hcCCceEEEEEccCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999998765444322111     0002345689999999999888775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|.... .+           .+++|+.++.++++    .+++.+..+||++||...+.+.     .
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  160 (267)
T 1iy8_A           86 TTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI-----G  160 (267)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-----S
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC-----C
Confidence                  68999999997543 22           34566666665544    4556678899999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-----cceEE-----ecccccCCCCCcc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-----YNVVV-----SAEASVDANDYKV  204 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-----~~i~~-----~~~~~~~~~~~~i  204 (427)
                      +.     ..|+.++ .+.+.+.+.+    ...|++++.|+||++........     .....     .....+..  .+.
T Consensus       161 ~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~  232 (267)
T 1iy8_A          161 NQ-----SGYAAAK-HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK--RYG  232 (267)
T ss_dssp             SB-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC--SCB
T ss_pred             CC-----ccHHHHH-HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCC--CCc
Confidence            11     1233222 2344444433    35689999999996543211000     00000     00001111  367


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+|||++++.+++++.. ..|..+++.++.
T Consensus       233 ~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          233 EAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            999999999999875432 368889988874

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.72  E-value=2.8e-16  Score=151.60  Aligned_cols=213  Identities=16%  Similarity=0.143  Sum_probs=138.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-------------cchHHHHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-------------LGAAQELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-------------~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+             ...++.+......       ...++.++.+|+
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv   86 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED-------QGRKALTRVLDV   86 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT-------TTCCEEEEECCT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-------cCCeEEEEEcCC
Confidence            45689999999999999999999999999999983             3333333222111       124566899999


Q ss_pred             CCHHHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecc
Q 044905           70 DSAESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDG  126 (427)
Q Consensus        70 ~D~~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs  126 (427)
                      +|.+++.++++       ++|++||++|.....+           .+++|+.++.++++++..    .+ ..+||++||.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           87 RDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            99999888775       7899999999765432           456788888888888743    33 5689999987


Q ss_pred             cccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc--------cceEEec-
Q 044905          127 NTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS--------YNVVVSA-  193 (427)
Q Consensus       127 ~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~--------~~i~~~~-  193 (427)
                      ..+.+.     .+.     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++........        ....... 
T Consensus       167 ~~~~~~-----~~~-----~~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  235 (280)
T 3pgx_A          167 AGLKAT-----PGN-----GHYSASK-HGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSF  235 (280)
T ss_dssp             GGTSCC-----TTB-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGS
T ss_pred             hhccCC-----CCc-----hhHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhh
Confidence            632211     111     1233222 22444444433    5789999999996654221100        0000000 


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          194 EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       194 ~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ......+..+.+.+|||++++.++++... ..|..+++.++
T Consensus       236 ~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  276 (280)
T 3pgx_A          236 PPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG  276 (280)
T ss_dssp             CCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred             hhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            00011112478999999999999875433 36889999877

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.72  E-value=2.7e-16  Score=150.20  Aligned_cols=213  Identities=18%  Similarity=0.128  Sum_probs=139.9

Q ss_pred             CCCCEEEEEcCCc-HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATG-QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG-~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++|+|||||| .||+++++.|+++|++|++++|+......+......      ....++.++.+|++|.+++.++++
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~~~~v~~~~~   93 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLAD------LGLGRVEAVVCDVTSTEAVDALIT   93 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT------TCSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh------cCCCceEEEEeCCCCHHHHHHHHH
Confidence            3456899999998 699999999999999999999998766554332211      112467799999999999888775


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc-----CCCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA-----GVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~-----gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             .+|+|||++|.....+           .+++|+.++.++++++...     +..+||++||...+...     
T Consensus        94 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----  168 (266)
T 3o38_A           94 QTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ-----  168 (266)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC-----
T ss_pred             HHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC-----
Confidence                   6799999999765432           4567888888888887654     55689988877632111     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-cceEEe--cccccCCCCCcccHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-YNVVVS--AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-~~i~~~--~~~~~~~~~~~i~v~DVA  210 (427)
                      .+.     ..|+.++ .+.+.+.+.+    ...|+++..|+||++........ ..-...  ....+..  .+.+.+|+|
T Consensus       169 ~~~-----~~Y~~sK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--r~~~~~dva  240 (266)
T 3o38_A          169 HSQ-----SHYAAAK-AGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFG--RAAEPWEVA  240 (266)
T ss_dssp             TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTS--SCCCHHHHH
T ss_pred             CCC-----chHHHHH-HHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcC--CCCCHHHHH
Confidence            111     1233222 2344444433    35789999999996654221110 000000  0111111  367999999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++++.+++.... ..|+++++.++
T Consensus       241 ~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          241 ATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHHcCccccCccCCEEEEcCC
Confidence            999998875332 46889999876

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.72  E-value=1.1e-16  Score=154.54  Aligned_cols=211  Identities=13%  Similarity=0.112  Sum_probs=138.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+....+......        ..++.++.+|++|.+++.++++  
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--------~~~~~~~~~Dv~d~~~v~~~~~~~   99 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA--------YGDCQAIPADLSSEAGARRLAQAL   99 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT--------SSCEEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------cCceEEEEeeCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999998765544322111        1245688999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCC----CeEEEEecccccccccCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGV----GHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gV----k~~V~vSSs~v~~~~~~~~  136 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++.    +.+.    ++||++||.+.+.+.    
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~----  175 (276)
T 2b4q_A          100 GELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM----  175 (276)
T ss_dssp             HHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC----
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC----
Confidence                 6899999999654321           45677888877777664    3454    799999987643221    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEe--cc--cccCCCCCcccHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVS--AE--ASVDANDYKVAKSQ  208 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~--~~~~~~~~~i~v~D  208 (427)
                       ....    ..|+.+| .+.+.+.+.+.    ..|++++.|+||++..........-...  ..  ..+..  .+.+.+|
T Consensus       176 -~~~~----~~Y~asK-~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~d  247 (276)
T 2b4q_A          176 -GEQA----YAYGPSK-AALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMG--RWGRPEE  247 (276)
T ss_dssp             -CCSC----TTHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTS--SCCCHHH
T ss_pred             -CCCc----cccHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCC--CcCCHHH
Confidence             1111    0222222 23444444433    5689999999996654221100000000  00  11111  3789999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ||++++.+++.... ..|..+++.++
T Consensus       248 vA~~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          248 MAALAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCccccCCCCCEEEeCCC
Confidence            99999999875432 36888888776

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.72  E-value=1.1e-16  Score=152.38  Aligned_cols=211  Identities=17%  Similarity=0.125  Sum_probs=139.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .++|+||||+|+||+++++.|+++|++|++++|+...  +..+......       ...++.++.+|++|.+++.++++ 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~   74 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA-------ADQKAVFVGLDVTDKANFDSAIDE   74 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999998875  4443322111       02356689999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCC-CeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGV-GHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gV-k~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|.....+           .+++|+.++.++++++..    .+. .+||++||.+.+.+.     .
T Consensus        75 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  149 (258)
T 3a28_C           75 AAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF-----P  149 (258)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----T
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----C
Confidence                  7999999999764432           456777788888877765    466 899999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCC-c-----------cceEE-ecccccCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPES-S-----------YNVVV-SAEASVDAND  201 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~-~-----------~~i~~-~~~~~~~~~~  201 (427)
                      +.     ..|+.++ .+.+.+.+.+    ...|++++.++||++....... .           ..... .....+..  
T Consensus       150 ~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--  221 (258)
T 3a28_C          150 IL-----SAYSTTK-FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALG--  221 (258)
T ss_dssp             TC-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTS--
T ss_pred             Cc-----hhHHHHH-HHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCC--
Confidence            11     1233222 2344444433    3568999999999664321100 0           00000 00001111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+.+.+|||++++.+++.... ..|..+++.++.
T Consensus       222 r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          222 RPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence            378999999999999875432 368889888774

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.72  E-value=7.3e-17  Score=153.91  Aligned_cols=213  Identities=16%  Similarity=0.122  Sum_probs=143.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++  
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-------AGGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765554332111       12456789999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|++||++|.....+          .+++|+.++.++++++    ++.+..+||++||...+.+.     .+..
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~  158 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN-----VRMA  158 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-----TTCH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-----CCch
Confidence                 7899999999765322          4567888888888886    34567799999987632111     1111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cc-eE-EecccccCCCCCcccHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YN-VV-VSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~-i~-~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                           .|+.+| .+.+.+.+.+.    ..|+++..++||++........ .. .. ......+..  .+.+.+|||++++
T Consensus       159 -----~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~--r~~~~~dva~~~~  230 (256)
T 3gaf_A          159 -----SYGSSK-AAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLG--RLGEAQDIANAAL  230 (256)
T ss_dssp             -----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTS--SCBCHHHHHHHHH
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCC--CCCCHHHHHHHHH
Confidence                 233222 23444444433    5689999999997654211000 00 00 000111111  3779999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDPS  235 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~~  235 (427)
                      .+++.... ..|.++++.++..
T Consensus       231 ~L~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          231 FLCSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSC
T ss_pred             HHcCCcccCccCCEEEECCCcc
Confidence            99874333 3689999998863

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.72  E-value=1.3e-16  Score=151.22  Aligned_cols=209  Identities=15%  Similarity=0.173  Sum_probs=134.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||||+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++ 
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~~~~~~~~~~~~   77 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-------AGAKVHVLELDVADRQGVDAAVAS   77 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHH
Confidence            4457899999999999999999999999999999998765544322111       01345689999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|....++           .+++|+.++.++++++.    +.+ .+||++||.+.+.+.     .+
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~~  151 (247)
T 2jah_A           78 TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-----RN  151 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-----CC
Confidence                  7999999999754332           35678888888888774    345 799999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.+| .+.+.+.+.    +...|++++.|+||++..........-....  ...+ .+..+++.+|||+++
T Consensus       152 ~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~pedvA~~v  224 (247)
T 2jah_A          152 AA-----VYQATK-FGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-SQIRKLQAQDIAEAV  224 (247)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-TTSCCBCHHHHHHHH
T ss_pred             Cc-----HHHHHH-HHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-cccCCCCHHHHHHHH
Confidence            11     232222 223333333    3357999999999966442211000000000  0001 111248999999999


Q ss_pred             HHHhcCcccccCcEEEE
Q 044905          214 ADVFSNTAVAENKVVKV  230 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI  230 (427)
                      +.+++++..+....+.+
T Consensus       225 ~~l~s~~~~~~~~~i~i  241 (247)
T 2jah_A          225 RYAVTAPHHATVHEIFI  241 (247)
T ss_dssp             HHHHHSCTTEEEEEEEE
T ss_pred             HHHhCCCccCccceEEe
Confidence            99987654444444444

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.72  E-value=1.2e-16  Score=153.39  Aligned_cols=214  Identities=15%  Similarity=0.132  Sum_probs=137.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH----HHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSA----ESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~----~sl~   76 (427)
                      |..++|+||||+|+||+++++.|+++|++|++++| +......+......      ....++.++.+|++|.    +++.
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~   82 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA------ARAGSAVLCKGDLSLSSSLLDCCE   82 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH------HSTTCEEEEECCCSSSTTHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH------hcCCceEEEeccCCCccccHHHHH
Confidence            44578999999999999999999999999999999 76655444322110      0013456899999999    8888


Q ss_pred             HHhc-------CcCEEEEccCCCCCCC----------------------CccccHHHHHHHHHHHHHc---CC------C
Q 044905           77 KAIG-------NAGKVVVTIGPTEDGP----------------------TSEVSTSDAFQVIQAAQLA---GV------G  118 (427)
Q Consensus        77 ~al~-------g~d~Vi~~ag~~~~~~----------------------~~~vn~~~~~~ll~Aa~~~---gV------k  118 (427)
                      ++++       ++|+|||++|.....+                      .+++|+.++.++++++...   +.      .
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g  162 (276)
T 1mxh_A           83 DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL  162 (276)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence            7765       7899999999654321                      3457788888999988773   44      7


Q ss_pred             eEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEe-c
Q 044905          119 HVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVS-A  193 (427)
Q Consensus       119 ~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~-~  193 (427)
                      +||++||.+.+...     .+.     ..|+.+| .+.+.+.+.+.    ..|++++.|+||++... .......... .
T Consensus       163 ~iv~isS~~~~~~~-----~~~-----~~Y~asK-~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~  230 (276)
T 1mxh_A          163 SVVNLCDAMTDLPL-----PGF-----CVYTMAK-HALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYR  230 (276)
T ss_dssp             EEEEECCGGGGSCC-----TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHH
T ss_pred             EEEEECchhhcCCC-----CCC-----eehHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHH
Confidence            89999987643211     111     1233322 23444444433    46899999999966443 1110000000 0


Q ss_pred             ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          194 EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       194 ~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ...+. +..+.+.+|+|++++.+++.... ..|..|++.++.
T Consensus       231 ~~~p~-~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          231 RKVPL-GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             TTCTT-TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hcCCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence            00111 10178999999999998874322 358889988773

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.72  E-value=3.8e-16  Score=150.26  Aligned_cols=219  Identities=16%  Similarity=0.110  Sum_probs=141.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC------------cchHHHHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE------------LGAAQELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~------------~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+            ...+..+......       ...++.++.+|+
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~   83 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED-------IGSRIVARQADV   83 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-------HTCCEEEEECCT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh-------cCCeEEEEeCCC
Confidence            345789999999999999999999999999999987            2222222211111       124667899999


Q ss_pred             CCHHHHHHHhc-------CcCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccc
Q 044905           70 DSAESIAKAIG-------NAGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTA  130 (427)
Q Consensus        70 ~D~~sl~~al~-------g~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~  130 (427)
                      +|.+++.++++       ++|++||++|......       .+++|+.++.++++++..    .+ ..+||++||.....
T Consensus        84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  163 (278)
T 3sx2_A           84 RDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLA  163 (278)
T ss_dssp             TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcC
Confidence            99999988876       7999999999765432       567888899999888644    33 56899999876322


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc--c----eE----Eecccc
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY--N----VV----VSAEAS  196 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~--~----i~----~~~~~~  196 (427)
                      +...      +......|+.+| .+.+.+.+.+    ...|+++..|+||++.........  .    ..    ......
T Consensus       164 ~~~~------~~~~~~~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (278)
T 3sx2_A          164 GVGS------ADPGSVGYVAAK-HGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMG  236 (278)
T ss_dssp             CCCC------SSHHHHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTS
T ss_pred             CCcc------CCCCchHhHHHH-HHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhh
Confidence            2110      111122343333 2344444443    356899999999966442211000  0    00    000000


Q ss_pred             cCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          197 VDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       197 ~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ...+..+++.+|||++++.+++.... ..|..|++.++.
T Consensus       237 ~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  275 (278)
T 3sx2_A          237 NAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF  275 (278)
T ss_dssp             CSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             hhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence            00112478999999999999875432 468899998874

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.72  E-value=2.1e-16  Score=151.71  Aligned_cols=211  Identities=13%  Similarity=0.123  Sum_probs=135.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +++|+||||+|+||+++++.|+++|++|+++ .|+....+.+......       ...++.++.+|++|.+++.++++  
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-------SGGEAVAIPGDVGNAADIAAMFSAV   98 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            4579999999999999999999999999887 5665554444332111       12456789999999998888775  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc-------CCCeEEEEecccccccccCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA-------GVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~-------gVk~~V~vSSs~v~~~~~~~~  136 (427)
                           ++|+|||++|.... .+           .+++|+.++.++++++...       +..+||++||.+.+.+..   
T Consensus        99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  175 (272)
T 4e3z_A           99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA---  175 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT---
T ss_pred             HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC---
Confidence                 68999999997643 21           4678888888888887654       356899999876422211   


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCC--ccceE-EecccccCCCCCcccHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPES--SYNVV-VSAEASVDANDYKVAKSQI  209 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~--~~~i~-~~~~~~~~~~~~~i~v~DV  209 (427)
                       ....     .|+.++ .+.+.+.+.+    ...|++++.|+||++.......  ..... ......+..  .+.+.+|+
T Consensus       176 -~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~edv  246 (272)
T 4e3z_A          176 -TQYV-----DYAASK-AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQ--RAGMPEEV  246 (272)
T ss_dssp             -TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTS--SCBCHHHH
T ss_pred             -CCcc-----hhHHHH-HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcC--CCcCHHHH
Confidence             0111     233222 2344444433    3568999999999665422110  00000 000111111  36789999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |++++.+++.... ..|..|++.++
T Consensus       247 A~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          247 ADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCCccccccCCEEeecCC
Confidence            9999999874332 35889999776

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.71  E-value=3.4e-16  Score=151.39  Aligned_cols=211  Identities=13%  Similarity=0.073  Sum_probs=131.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .++++||||+|+||+++++.|+++|++|++++| +......+......       ...++.++.+|++|.+++.++++  
T Consensus        29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-------LGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-------TTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999996 44444433222111       12356789999999888887775  


Q ss_pred             -----CcCEEEEccCCC--CCCC-----------CccccHHHHHHHHHHHHHc----C---CCeEEEEecccccccccCC
Q 044905           81 -----NAGKVVVTIGPT--EDGP-----------TSEVSTSDAFQVIQAAQLA----G---VGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 -----g~d~Vi~~ag~~--~~~~-----------~~~vn~~~~~~ll~Aa~~~----g---Vk~~V~vSSs~v~~~~~~~  135 (427)
                           ++|++||++|..  ...+           .+++|+.++.++++++...    +   ..+||++||.+.+.+.   
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---  178 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS---  178 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC---
Confidence                 789999999973  2211           5678999999888877543    3   4589999987632211   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-eE--EecccccCCCCCcccHHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-VV--VSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i~--~~~~~~~~~~~~~i~v~D  208 (427)
                        .+..     .|+.+| .+.+.+.+.+    ...|+++..|+||++.......... ..  ......+..  .+.+.+|
T Consensus       179 --~~~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~--r~~~ped  248 (280)
T 4da9_A          179 --PERL-----DYCMSK-AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMR--RWGEPED  248 (280)
T ss_dssp             ---CCH-----HHHHHH-HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHH
T ss_pred             --CCcc-----HHHHHH-HHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcC--CcCCHHH
Confidence              1111     232222 2344444433    3578999999999665422111000 00  000011111  3678999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ||++++.+++.... ..|..+++.++.
T Consensus       249 vA~~v~~L~s~~~~~itG~~i~vdGG~  275 (280)
T 4da9_A          249 IGNIVAGLAGGQFGFATGSVIQADGGL  275 (280)
T ss_dssp             HHHHHHHHHTSTTGGGTTCEEEESTTC
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCc
Confidence            99999999875433 468999998875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.71  E-value=2.1e-16  Score=152.57  Aligned_cols=214  Identities=10%  Similarity=0.071  Sum_probs=142.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++  
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~d~~~v~~~~~~~  103 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-------VGGKALPIRCDVTQPDQVRGMLDQM  103 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-------TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998876655432211       12356789999999999888876  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|++||++|.....+           .+++|+.++.++++++..    .+ -.+||++||.+.+....   ..+
T Consensus       104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~---~~~  180 (276)
T 3r1i_A          104 TGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI---PQQ  180 (276)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC---SSC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC---CCC
Confidence                 7999999999765432           345788888888887754    33 26789888776321110   011


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEE-ecccccCCCCCcccHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVV-SAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      .     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++............. .....+..  .+.+.+|||++++
T Consensus       181 ~-----~~Y~asK-aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~--r~~~pedvA~~v~  252 (276)
T 3r1i_A          181 V-----SHYCTSK-AAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLG--RMGRPEELTGLYL  252 (276)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTS--SCBCGGGSHHHHH
T ss_pred             c-----chHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            1     1233222 23444444433    468999999999665432211111000 00111111  3678999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+++.... ..|.++++.++.
T Consensus       253 fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          253 YLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHcCccccCccCcEEEECcCc
Confidence            99875433 368899998874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.71  E-value=5.1e-16  Score=148.34  Aligned_cols=193  Identities=15%  Similarity=0.149  Sum_probs=128.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+.+..+......       ...++.++.+|++|.+++.++++  
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~v~~~~~~~  100 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-------AGGEAESHACDLSHSDAIAAFATGV  100 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-------hCCceeEEEecCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999998766555332211       12356789999999999888765  


Q ss_pred             -----CcCEEEEccCCC-CCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPT-EDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~-~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           .+|+|||++|.. ..++           .+++|+.++.++++++.    +.+..+||++||.+.+.+.     .+
T Consensus       101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  175 (262)
T 3rkr_A          101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV-----AD  175 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC-----TT
T ss_pred             HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC-----CC
Confidence                 589999999973 2221           45678888888888764    4677899999987632111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .     ..|+.++ .+.+.+.+.+    ...|+++..++||++......   ...  .. .  ....+++.+|||++++.
T Consensus       176 ~-----~~Y~asK-aa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~---~~~--~~-~--~~~~~~~p~dvA~~v~~  241 (262)
T 3rkr_A          176 G-----AAYTASK-WGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGV---GLS--AK-K--SALGAIEPDDIADVVAL  241 (262)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCCHHHHHHHHHH
T ss_pred             C-----chHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccc---ccc--cc-c--ccccCCCHHHHHHHHHH
Confidence            1     1233222 2234444433    357899999999976542211   110  00 1  11237899999999999


Q ss_pred             HhcCcc
Q 044905          216 VFSNTA  221 (427)
Q Consensus       216 al~~~~  221 (427)
                      +++...
T Consensus       242 l~s~~~  247 (262)
T 3rkr_A          242 LATQAD  247 (262)
T ss_dssp             HHTCCT
T ss_pred             HhcCcc
Confidence            987643

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.71  E-value=3.4e-16  Score=154.81  Aligned_cols=161  Identities=16%  Similarity=0.195  Sum_probs=113.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-----hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-----AAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-----~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |..++|+||||||+||+++++.|+++|++|++++|+..     .++.+......       ...++.++.+|++|.+++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~-------~~~~~~~~~~Dvtd~~~v~   75 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-------NDVDLRTLELDVQSQVSVD   75 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH-------HTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh-------cCCcEEEEEeecCCHHHHH
Confidence            44578999999999999999999999999999998752     22222221111       1245678999999999998


Q ss_pred             HHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccC
Q 044905           77 KAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        77 ~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~  134 (427)
                      ++++       ++|+|||++|....++           .+++|+.++.++++++    ++.+.++||++||++...+.. 
T Consensus        76 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~-  154 (324)
T 3u9l_A           76 RAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP-  154 (324)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC-
Confidence            8876       8999999999764332           4578889999999988    667888999999876321110 


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCC
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTE  179 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~  179 (427)
                         ...     ..|+.+| .+.+.+.+.+.    ..|+++++|+||++.
T Consensus       155 ---~~~-----~~Y~asK-aa~~~~~~~la~el~~~gI~v~~v~PG~v~  194 (324)
T 3u9l_A          155 ---PYL-----APYFAAK-AAMDAIAVQYARELSRWGIETSIIVPGAFT  194 (324)
T ss_dssp             ---SSC-----HHHHHHH-HHHHHHHHHHHHHHHTTTEEEEEEEECCC-
T ss_pred             ---Ccc-----hhHHHHH-HHHHHHHHHHHHHhhhhCcEEEEEECCccc
Confidence               011     1233222 23455444443    579999999999553

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.71  E-value=1.9e-16  Score=151.02  Aligned_cols=198  Identities=9%  Similarity=0.097  Sum_probs=134.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +.+++|+||||||+||++|++.|+++|   ++|++++|+......+......        ..++.++.+|++|.+++.++
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~--------~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN--------HSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH--------CTTEEEEECCTTCGGGHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc--------CCceEEEEecCCChHHHHHH
Confidence            356789999999999999999999999   9999999998755444322111        23567899999999988887


Q ss_pred             hc---------CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHHc----------C-----CCeEEE
Q 044905           79 IG---------NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQLA----------G-----VGHVAI  122 (427)
Q Consensus        79 l~---------g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~~----------g-----Vk~~V~  122 (427)
                      ++         ++|+|||++|... ..+           .+++|+.++.++++++...          +     ..+||+
T Consensus        91 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           91 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            76         7999999999765 221           4567888888888887543          2     578999


Q ss_pred             EecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccC
Q 044905          123 IYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVD  198 (427)
Q Consensus       123 vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~  198 (427)
                      +||...+....  ...+.     ..|+.++ .+.+.+.+.+.    ..|+++++|+||++......   .          
T Consensus       171 isS~~~~~~~~--~~~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~----------  229 (267)
T 1sny_A          171 MSSILGSIQGN--TDGGM-----YAYRTSK-SALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG---S----------  229 (267)
T ss_dssp             ECCGGGCSTTC--CSCCC-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC---T----------
T ss_pred             EecccccccCC--CCCCc-----hHHHHHH-HHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCC---C----------
Confidence            99876432211  00111     1233332 33455554443    46899999999976542210   0          


Q ss_pred             CCCCcccHHHHHHHHHHHhcCccc-ccCcEEEE
Q 044905          199 ANDYKVAKSQIASLVADVFSNTAV-AENKVVKV  230 (427)
Q Consensus       199 ~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI  230 (427)
                        ..+++.+|+|+.++.++..... ..|..+.+
T Consensus       230 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~  260 (267)
T 1sny_A          230 --SAPLDVPTSTGQIVQTISKLGEKQNGGFVNY  260 (267)
T ss_dssp             --TCSBCHHHHHHHHHHHHHHCCGGGTTCEECT
T ss_pred             --CCCCCHHHHHHHHHHHHHhcCcCCCCcEEcc
Confidence              1367899999999998864333 24555443

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.71  E-value=7.5e-16  Score=149.24  Aligned_cols=215  Identities=16%  Similarity=0.144  Sum_probs=141.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+......       ...++.++.+|++|.+++.++++  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-------AGGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            346799999999999999999999999999999998766555432211       12356789999999998887775  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|++||++|.... .+           .+++|+.++.++++++    ++.+..+||++||.+......   ..+
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~---~~~  176 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFT---TPG  176 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC---STT
T ss_pred             HHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCC---CCC
Confidence                 79999999997532 11           4678888999988887    556778999999876321100   011


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE-------Eec--ccccCCCCCcccH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV-------VSA--EASVDANDYKVAK  206 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~-------~~~--~~~~~~~~~~i~v  206 (427)
                      .     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++............       ...  ...+...-.+.+.
T Consensus       177 ~-----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~p  250 (283)
T 3v8b_A          177 A-----TAYTATK-AAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRS  250 (283)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCH
T ss_pred             c-----hHHHHHH-HHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCH
Confidence            1     2233322 23444444443    46899999999965432211110000       000  0001100135689


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|||++++.++++... ..|..+++.++
T Consensus       251 edvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          251 EDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            9999999999875433 36888888777

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.71  E-value=1.2e-16  Score=152.47  Aligned_cols=202  Identities=16%  Similarity=0.165  Sum_probs=134.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ++.++|+||||||+||+++++.|+++|++|+++.|+.+..+.                  +.++.+|++|.+++.++++ 
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------------------~~~~~~Dl~d~~~v~~~~~~   80 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------------------FLAVKCDITDTEQVEQAYKE   80 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------------SEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------------------ceEEEecCCCHHHHHHHHHH
Confidence            346789999999999999999999999999999998764321                  2489999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            .+|+|||++|.....+           .+++|+.++.++++++..    .+..+||++||.+.+.+.       
T Consensus        81 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-------  153 (253)
T 2nm0_A           81 IEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-------  153 (253)
T ss_dssp             HHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-------
Confidence                  4799999999754321           456888888888886643    477899999987632110       


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                         .....|+.++ .+.+.+.+.+    ...|++++.++||++..........-....  ...+..  .+++.+|+|+++
T Consensus       154 ---~~~~~Y~asK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~--~~~~p~dvA~~i  227 (253)
T 2nm0_A          154 ---AGQANYAASK-AGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLG--RYARPEEIAATV  227 (253)
T ss_dssp             ---HHHHHHHHHH-HHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTC--SCBCHHHHHHHH
T ss_pred             ---CCcHHHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence               1112333332 2344444433    357899999999966442211000000000  001111  378999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++.++.. ..|..+.+.++.
T Consensus       228 ~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          228 RFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHhCccccCCcCcEEEECCcc
Confidence            999875433 368888888774

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.71  E-value=3.1e-16  Score=149.24  Aligned_cols=212  Identities=11%  Similarity=0.059  Sum_probs=136.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||++++++|+++|++|++++|+.+++..+....          ..++.++.+|++|.+++.++++ 
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~   76 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----------GDAALAVAADISKEADVDAAVEA   76 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----------CCceEEEEecCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999987766554321          2345689999999998888775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc----C----CCeEEEEecccccccccC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA----G----VGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~----g----Vk~~V~vSSs~v~~~~~~  134 (427)
                            ++|++||++|.... .+           .+++|+.++.++++++...    +    ..+||++||...+...  
T Consensus        77 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--  154 (261)
T 3n74_A           77 ALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR--  154 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC--
T ss_pred             HHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC--
Confidence                  68999999997542 11           4567888888888776432    1    3468988877632111  


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-----ceEE-ecccccCCCCCcc
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-----NVVV-SAEASVDANDYKV  204 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-----~i~~-~~~~~~~~~~~~i  204 (427)
                         ....     .|+.+| .+.+.+.+.+    ...|+++..++||++.........     .... .....+..  .++
T Consensus       155 ---~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  223 (261)
T 3n74_A          155 ---PNLA-----WYNATK-GWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMG--RLL  223 (261)
T ss_dssp             ---TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTS--SCC
T ss_pred             ---CCcc-----HHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcC--CCc
Confidence               1111     232222 2244444433    356899999999965432111000     0000 00011111  478


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCCCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      +.+|+|++++.+++.... ..|.++++.++...
T Consensus       224 ~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          224 KPDDLAEAAAFLCSPQASMITGVALDVDGGRSI  256 (261)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC
T ss_pred             CHHHHHHHHHHHcCCcccCcCCcEEEecCCccc
Confidence            999999999999864322 46899999988633

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.71  E-value=3.6e-16  Score=150.14  Aligned_cols=211  Identities=15%  Similarity=0.129  Sum_probs=133.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||+|+||+++++.|+++|++|++++|+.+.++.+......       ...++.++.+|++|.+++.++++  
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~   75 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD-------AGGTALAQVLDVTDRHSVAAFAQAA   75 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998766554332211       02345688999999998887765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||.+.+.+.     .+.
T Consensus        76 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----~~~  150 (264)
T 3tfo_A           76 VDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----PTA  150 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----TTC
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----CCC
Confidence                 7899999999765433           45678888887777664    4567899999987632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh-c-CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI-E-TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~-~-~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                           ..|+.+| .+.+.+.+.+. + .|+++..|+||++..........-.......... ..+.+.+|||++++.+++
T Consensus       151 -----~~Y~asK-aal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~pedvA~~v~~l~s  223 (264)
T 3tfo_A          151 -----AVYCATK-FAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETMAAMDTYR-AIALQPADIARAVRQVIE  223 (264)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHCSSEEEEEEEECCC------------------------CCCHHHHHHHHHHHHH
T ss_pred             -----hhHHHHH-HHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHHHHHHhhh-ccCCCHHHHHHHHHHHhc
Confidence                 1233222 23444444444 2 3899999999966542211100000000000001 124789999999999998


Q ss_pred             CcccccCcEEEEec
Q 044905          219 NTAVAENKVVKVFT  232 (427)
Q Consensus       219 ~~~~~~g~~~nI~~  232 (427)
                      .+.......+.+..
T Consensus       224 ~~~~~~~~~i~i~p  237 (264)
T 3tfo_A          224 APQSVDTTEITIRP  237 (264)
T ss_dssp             SCTTEEEEEEEEEE
T ss_pred             CCccCccceEEEec
Confidence            76443334444443

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.71  E-value=7.6e-17  Score=152.94  Aligned_cols=211  Identities=19%  Similarity=0.156  Sum_probs=141.2

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++..++++||||+|+||+++++.|+++|++|++++|+.+....+....          ..++.++.+|++|.+++.++++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~   72 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----------GKKARAIAADISDPGSVKALFA   72 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----------CTTEEECCCCTTCHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCceEEEEcCCCCHHHHHHHHH
Confidence            356789999999999999999999999999999999987665543321          1245688999999999888775


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHH----HHHcC-CCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQA----AQLAG-VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~A----a~~~g-Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                             ++|++||++|.....+           .+++|+.++.+++++    +++.+ ..+||++||...+.+.     
T Consensus        73 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  147 (247)
T 3rwb_A           73 EIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT-----  147 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC-----
T ss_pred             HHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC-----
Confidence                   7899999999765432           456788888888887    55555 6789999887632211     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-ceE--EecccccCCCCCcccHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-NVV--VSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-~i~--~~~~~~~~~~~~~i~v~DVA  210 (427)
                      .+..     .|+.+| .+.+.+.+.+    ...|+++..++||++......... ...  ......+..  .+.+.+|||
T Consensus       148 ~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--r~~~pedva  219 (247)
T 3rwb_A          148 PNMA-----AYVAAK-GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMK--GKGQPEHIA  219 (247)
T ss_dssp             TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSC--SCBCHHHHH
T ss_pred             CCch-----hhHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccC--CCcCHHHHH
Confidence            1112     222222 2233443333    357899999999976542110000 000  000001111  367899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++..++++... ..|..+++.++.
T Consensus       220 ~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          220 DVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhCccccCCCCCEEEECCCc
Confidence            999999875433 368899988774

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.71  E-value=3.8e-17  Score=156.35  Aligned_cols=215  Identities=12%  Similarity=0.091  Sum_probs=136.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++|+||||||+||+++++.|+++|++|++++|+.+....+......     .....++.++.+|++|.+++.++++   
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE-----QFEPQKTLFIQCDVADQQQLRDTFRKVV   81 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----TSCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----hcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999997665443221110     0001345689999999999888775   


Q ss_pred             ----CcCEEEEccCCCCCCC---CccccHHHHHHH----HHHHHHcC---CCeEEEEecccccccccCCCCCCCCccchh
Q 044905           81 ----NAGKVVVTIGPTEDGP---TSEVSTSDAFQV----IQAAQLAG---VGHVAIIYDGNTTAASTYNVLDGISSFFNN  146 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~---~~~vn~~~~~~l----l~Aa~~~g---Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~  146 (427)
                          ++|+|||++|......   .+++|+.++.++    +.++++.+   ..+||++||.+.+.+.     .+..     
T Consensus        82 ~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~-----  151 (267)
T 2gdz_A           82 DHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----AQQP-----  151 (267)
T ss_dssp             HHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTCH-----
T ss_pred             HHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----CCCc-----
Confidence                4799999999764332   455666655444    44554443   5789999987643211     1111     


Q ss_pred             hhhccccccHHHHHHH------HhcCCCeEEEEeCCCCCCCCCCCccce-EEecc----c---ccCCCCCcccHHHHHHH
Q 044905          147 LFSRNQPLTVPEFLQK------VIETDVSYTFIKTSLTEDFSPESSYNV-VVSAE----A---SVDANDYKVAKSQIASL  212 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~------l~~~gl~~tilRPG~~~~~~~~~~~~i-~~~~~----~---~~~~~~~~i~v~DVA~~  212 (427)
                      .|+.++ .+.+.+.+.      +...|++++.|+||++........... .....    .   .......+++.+|||++
T Consensus       152 ~Y~~sK-~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~  230 (267)
T 2gdz_A          152 VYCASK-HGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANG  230 (267)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHH
T ss_pred             hHHHHH-HHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHH
Confidence            222222 223444432      336799999999996643211000000 00000    0   00001136799999999


Q ss_pred             HHHHhcCcccccCcEEEEecCCC
Q 044905          213 VADVFSNTAVAENKVVKVFTDPS  235 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~~~  235 (427)
                      ++.++++. ...|.+|++.++..
T Consensus       231 v~~l~s~~-~~~G~~~~v~gg~~  252 (267)
T 2gdz_A          231 LITLIEDD-ALNGAIMKITTSKG  252 (267)
T ss_dssp             HHHHHHCT-TCSSCEEEEETTTE
T ss_pred             HHHHhcCc-CCCCcEEEecCCCc
Confidence            99999854 46789999998863

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.71  E-value=4.1e-17  Score=156.73  Aligned_cols=194  Identities=15%  Similarity=0.119  Sum_probs=130.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.+.+..+.             ..++.++.+|++|.+++.++++  
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-------------~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-------------LPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-------------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-------------cCCceEEEecCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999976543321             1244589999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|....++           .+++|+.++.++++++    ++.+..+||++||.+.+.+.     .+.
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----~~~  156 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----PDH  156 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----TTC
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----CCC
Confidence                 7899999999764422           4567888888876665    45678899999987642211     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-eEEec--c-cccCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-VVVSA--E-ASVDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i~~~~--~-~~~~~~~~~i~v~DVA~~  212 (427)
                      .     .|+.+| .+.+.+.+.+    ...|+++..|+||++.......... .....  . ..+..  .+++.+|||++
T Consensus       157 ~-----~Y~asK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--r~~~pedvA~a  228 (266)
T 3p19_A          157 A-----AYCGTK-FAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMG--GVLAADDVARA  228 (266)
T ss_dssp             H-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTT--CCBCHHHHHHH
T ss_pred             c-----hHHHHH-HHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhccccc--CCCCHHHHHHH
Confidence            1     232222 2234444333    3578999999999665422111000 00000  0 00111  37899999999


Q ss_pred             HHHHhcCccc
Q 044905          213 VADVFSNTAV  222 (427)
Q Consensus       213 v~~al~~~~~  222 (427)
                      ++.+++++..
T Consensus       229 v~~l~~~~~~  238 (266)
T 3p19_A          229 VLFAYQQPQN  238 (266)
T ss_dssp             HHHHHHSCTT
T ss_pred             HHHHHcCCCC
Confidence            9999987643

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.71  E-value=5.4e-17  Score=153.87  Aligned_cols=202  Identities=17%  Similarity=0.169  Sum_probs=133.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.++...+                  ..+.+|++|.+++.++++ 
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------------------~~~~~D~~~~~~~~~~~~~   74 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL------------------FGVEVDVTDSDAVDRAFTA   74 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS------------------EEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh------------------cCeeccCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999987643221                  137899999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||...+.+.     .+
T Consensus        75 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  149 (247)
T 1uzm_A           75 VEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----GN  149 (247)
T ss_dssp             HHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------C
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----CC
Confidence                  5799999999764321           45678888888888765    4577899999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .     ..|+.+| .+.+.+.+.+    ...|+++++++||++..........-...  ....+..  .+.+.+|+|+++
T Consensus       150 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~~~  221 (247)
T 1uzm_A          150 Q-----ANYAASK-AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK--RVGTPAEVAGVV  221 (247)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTC--SCBCHHHHHHHH
T ss_pred             C-----hhHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            1     1233222 2234444433    35689999999996643211000000000  0001111  378999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+++.... ..|..+++.++.
T Consensus       222 ~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          222 SFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHcCccccCCcCCEEEECCCc
Confidence            999874332 368899998874

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.71  E-value=2.1e-16  Score=150.45  Aligned_cols=205  Identities=11%  Similarity=-0.006  Sum_probs=137.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+++|+||||||+||+++++.|++ .|++|++++|+.+....+......       ...++.++.+|++|.+++..+++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-------EGLSPRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-------TTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-------cCCeeEEEECCCCCHHHHHHHHH
Confidence            3567999999999999999999999 999999999997765444322111       02356789999999999988876


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCC--CeEEEEecccccccccC--C---
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGV--GHVAIIYDGNTTAASTY--N---  135 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gV--k~~V~vSSs~v~~~~~~--~---  135 (427)
                             ++|+|||++|......           .+++|+.++.++++++.....  .+||++||...+.+...  +   
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~  154 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQ  154 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHH
Confidence                   7999999999654211           356788899999999977632  48999998764321000  0   


Q ss_pred             ------CC--------------------CCCCccchhhhhccccccHHHHHHHHh----c----CCCeEEEEeCCCCCCC
Q 044905          136 ------VL--------------------DGISSFFNNLFSRNQPLTVPEFLQKVI----E----TDVSYTFIKTSLTEDF  181 (427)
Q Consensus       136 ------~~--------------------~~~~~~~~~~~~k~~~l~~E~~l~~l~----~----~gl~~tilRPG~~~~~  181 (427)
                            ..                    .....+....|+.++ .+.+.+.+.+.    .    .|++++.|+||++...
T Consensus       155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK-~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~  233 (276)
T 1wma_A          155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTK-IGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD  233 (276)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHH-HHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred             hhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHH-HHHHHHHHHHHHHhhcccCCCceEEEEecCCccccC
Confidence                  00                    000001112344333 33455554433    3    5899999999976542


Q ss_pred             CCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcc---cccCcEEE
Q 044905          182 SPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTA---VAENKVVK  229 (427)
Q Consensus       182 ~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~---~~~g~~~n  229 (427)
                      ..   ..            ..+.+.+|+|+.++.++..+.   ...|..|.
T Consensus       234 ~~---~~------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~  269 (276)
T 1wma_A          234 MA---GP------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS  269 (276)
T ss_dssp             TT---CT------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             cC---Cc------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence            21   10            136899999999999987542   23455554

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.71  E-value=9e-17  Score=152.57  Aligned_cols=212  Identities=18%  Similarity=0.156  Sum_probs=137.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||++++++|+++|++|++++ |+......+......       ...++.++.+|++|.+++.++++ 
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-------LGFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-------TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCeeEEEecCCCCHHHHHHHHHH
Confidence            456899999999999999999999999999988 555444333221111       12356789999999998888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+.+.+.     .+
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  159 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----FG  159 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----SC
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----CC
Confidence                  6899999999765322           4567888877776665    45677899999987632211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.++ .+.+.+.+.+    ...|+++..++||++..........-....  ...+..  .+.+.+|+|+++
T Consensus       160 ~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~dva~~~  231 (256)
T 3ezl_A          160 QT-----NYSTAK-AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVR--RLGSPDEIGSIV  231 (256)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTS--SCBCHHHHHHHH
T ss_pred             Cc-----ccHHHH-HHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            11     233222 2234444333    356899999999976542110000000000  001111  367999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+++.... ..|..|++.++.
T Consensus       232 ~~l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          232 AWLASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTS
T ss_pred             HHHhCCcccCCcCcEEEECCCE
Confidence            998864322 468899998874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.70  E-value=4.2e-17  Score=154.34  Aligned_cols=208  Identities=13%  Similarity=0.104  Sum_probs=137.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+..+...+.    +        ..++.++.+|++|.+++.+++  
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~--------~~~~~~~~~D~~~~~~~~~~~~~   71 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE----K--------YPGIQTRVLDVTKKKQIDQFANE   71 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG----G--------STTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----h--------ccCceEEEeeCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999875443321    1        124568999999999888664  


Q ss_pred             -cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCCcc
Q 044905           80 -GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        80 -~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                       .++|+|||++|.....+           .+++|+.++.++++++.    +.+..+||++||.+.+....    .+.   
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~---  144 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV----VNR---  144 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----TTB---
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----CCC---
Confidence             57899999999765322           34677788888888764    45778999999876322110    011   


Q ss_pred             chhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-c------cceEE-ecccccCCCCCcccHHHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-S------YNVVV-SAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~------~~i~~-~~~~~~~~~~~~i~v~DVA~  211 (427)
                        ..|+.+| .+.+.+.+.+.    ..|++++++|||.+....... .      ..... .....+..  .+.+.+|||+
T Consensus       145 --~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dvA~  219 (246)
T 2ag5_A          145 --CVYSTTK-AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG--RFATAEEIAM  219 (246)
T ss_dssp             --HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS--SCEEHHHHHH
T ss_pred             --ccHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCC--CCCCHHHHHH
Confidence              1233332 23455554443    468999999999654311000 0      00000 00001111  3789999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++.+++.... ..|..+++.++
T Consensus       220 ~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          220 LCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             HHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHHHHhCccccCCCCCEEEECCC
Confidence            99999875433 36888888876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.70  E-value=4.3e-16  Score=146.74  Aligned_cols=189  Identities=15%  Similarity=0.141  Sum_probs=126.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |.+++++||||+|+||+++++.|+++|++|++++|+.+.++.+....          ..++.++.+|++|.+++.++++ 
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~   70 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL----------GNAVIGIVADLAHHEDVDVAFAA   70 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------cCCceEEECCCCCHHHHHHHHHH
Confidence            56789999999999999999999999999999999987665543321          1135689999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            ++|++||++|.....+           .+++|+.++.++++++...   .-.+||++||.+...+.        
T Consensus        71 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~--------  142 (235)
T 3l6e_A           71 AVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK--------  142 (235)
T ss_dssp             HHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC--------
T ss_pred             HHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC--------
Confidence                  6799999999754322           5678888998888887542   11389999887632111        


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      +.  ...|+.+| .+.+.+.+.+.    ..|+++..++||++.........   .    ..  ...+.+.+|+|+.++.+
T Consensus       143 ~~--~~~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~----~~--~~~~~~pedvA~~v~~l  210 (235)
T 3l6e_A          143 AN--ESLYCASK-WGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD---H----VD--PSGFMTPEDAAAYMLDA  210 (235)
T ss_dssp             SS--HHHHHHHH-HHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------CBCHHHHHHHHHHH
T ss_pred             CC--CcHHHHHH-HHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC---C----CC--CcCCCCHHHHHHHHHHH
Confidence            11  12333332 23444444443    56899999999966542211100   0    01  11478999999999999


Q ss_pred             hcCc
Q 044905          217 FSNT  220 (427)
Q Consensus       217 l~~~  220 (427)
                      ++.+
T Consensus       211 ~~~~  214 (235)
T 3l6e_A          211 LEAR  214 (235)
T ss_dssp             TCCC
T ss_pred             HhCC
Confidence            9754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=1.9e-16  Score=154.48  Aligned_cols=215  Identities=12%  Similarity=0.094  Sum_probs=139.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+..+...+.......    .....++.++.+|++|.+++.++++  
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA----GVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----CCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            4468999999999999999999999999999999987655443221110    0001156789999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           ++|+|||++|.....+             .+++|+.++.++++++..    .+ .+||++||...+...    ..
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~----~~  175 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA----HS  175 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC----CT
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC----CC
Confidence                 7899999999654322             456777788888777654    45 799999987632211    01


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc----------ceEEe-cccccCCCCCc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY----------NVVVS-AEASVDANDYK  203 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~----------~i~~~-~~~~~~~~~~~  203 (427)
                      +.     ..|+.+| .+.+.+.+.+    ...|+++++|+||++.........          ..... ....+..  .+
T Consensus       176 ~~-----~~Y~asK-aa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~  247 (297)
T 1xhl_A          176 GY-----PYYACAK-AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG--HC  247 (297)
T ss_dssp             TS-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS--SC
T ss_pred             Cc-----chHHHHH-HHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCC--CC
Confidence            11     1233222 2344444443    357999999999966542110000          00000 0001111  36


Q ss_pred             ccHHHHHHHHHHHhcCc-c-cccCcEEEEecCC
Q 044905          204 VAKSQIASLVADVFSNT-A-VAENKVVKVFTDP  234 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~-~-~~~g~~~nI~~~~  234 (427)
                      .+.+|||++++.+++.. . -..|..+++.++.
T Consensus       248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~  280 (297)
T 1xhl_A          248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  280 (297)
T ss_dssp             BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCCcccCCccCcEEEECCCc
Confidence            89999999999988643 2 2468899998885

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.70  E-value=6.3e-16  Score=152.39  Aligned_cols=201  Identities=12%  Similarity=0.163  Sum_probs=127.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++||||||||+||++|++.|+++|++|++++|+.++.+.+.......     ....++.++.+|++|.+++.++++   
T Consensus         8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-----~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-----GSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----TCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            458999999999999999999999999999999987665543321110     001256789999999999888775   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----------CCCeEEEEecccccccccCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----------GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----------gVk~~V~vSSs~v~~~~~~~  135 (427)
                          ++|+|||++|....++           .+++|+.++.++++++...          +..+||++||.+.+.+..  
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~--  160 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG--  160 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS--
T ss_pred             HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC--
Confidence                5799999999765433           5678888999988877553          356799999876422211  


Q ss_pred             CCCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCcc--ceEEec-----cc----ccCC-
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSY--NVVVSA-----EA----SVDA-  199 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~--~i~~~~-----~~----~~~~-  199 (427)
                         ..     ..|+.++ .+.+.+.+    .+...|+++++|+||++.........  .-...+     ..    .... 
T Consensus       161 ---~~-----~~Y~aSK-aal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (319)
T 3ioy_A          161 ---SP-----GIYNTTK-FAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGV  231 (319)
T ss_dssp             ---SS-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCG
T ss_pred             ---CC-----HHHHHHH-HHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHh
Confidence               11     1233222 22333333    33467899999999966432111000  000000     00    0000 


Q ss_pred             CCCcccHHHHHHHHHHHhcCc
Q 044905          200 NDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~  220 (427)
                      ....++.+|+|+.++.++..+
T Consensus       232 ~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          232 HEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             GGSSBCHHHHHHHHHHHHHTT
T ss_pred             hhcCCCHHHHHHHHHHHHHcC
Confidence            001279999999999998753

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.70  E-value=3.7e-16  Score=150.64  Aligned_cols=208  Identities=14%  Similarity=0.103  Sum_probs=131.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++.++++  
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~   96 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI----------GDDALCVPTDVTDPDSVRALFTAT   96 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------TSCCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------CCCeEEEEecCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999987665543321          1355689999999999888876  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----cC--CCeEEEEecccccccccCCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----AG--VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~g--Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                           ++|++||++|.... .+           .+++|+.++.++++++..    .+  ..+||++||...+.+.     
T Consensus        97 ~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----  171 (272)
T 4dyv_A           97 VEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-----  171 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC-----
Confidence                 79999999997543 11           456788888888776644    33  4689999987632211     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-ceEEecccccCCCCCcccHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-NVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      .+..     .|+.+| .+.+.+.+.+    ...|+++..|+||++......... ...........  ..+.+.+|||++
T Consensus       172 ~~~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~pedvA~~  243 (272)
T 4dyv_A          172 PYSA-----PYTATK-HAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKV--EPVMDVAHVASA  243 (272)
T ss_dssp             TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------CHHHHHHH
T ss_pred             CCch-----HHHHHH-HHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccchhhhhcccc--cCCCCHHHHHHH
Confidence            1111     233222 2344444433    356899999999965542211100 00000000111  137899999999


Q ss_pred             HHHHhcCcccccCcEEEEecC
Q 044905          213 VADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~~~g~~~nI~~~  233 (427)
                      ++.+++.+.......+.+...
T Consensus       244 v~fL~s~~~~~~~~~i~i~~~  264 (272)
T 4dyv_A          244 VVYMASLPLDANVQFMTIMAT  264 (272)
T ss_dssp             HHHHHHSCTTSCCCEEEEEEC
T ss_pred             HHHHhCCCCcCccceEEEecc
Confidence            999998765544455555443

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.70  E-value=3.2e-16  Score=151.71  Aligned_cols=213  Identities=14%  Similarity=0.074  Sum_probs=141.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+......       ...++.++.+|++|.+++..+++  
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-------GGGEAAALAGDVGDEALHEALVELA   79 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT-------TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999998766555432211       12456688999999998888775  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|++||++|.... ++           .+++|+.++.++++++..    .+..+||++||...+...    ..+
T Consensus        80 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~  155 (280)
T 3tox_A           80 VRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG----FAG  155 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC----CTT
T ss_pred             HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC----CCC
Confidence                 78999999996532 11           457788888888887643    456799999987632110    011


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCC-c---cceEE--ecccccCCCCCcccHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPES-S---YNVVV--SAEASVDANDYKVAKSQI  209 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~-~---~~i~~--~~~~~~~~~~~~i~v~DV  209 (427)
                      ..     .|+.+| .+.+.+.+.+    ...|+++..|+||++....... .   ..-..  .....+..  .+.+.+||
T Consensus       156 ~~-----~Y~asK-aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedv  227 (280)
T 3tox_A          156 VA-----PYAASK-AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALK--RIARPEEI  227 (280)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTS--SCBCHHHH
T ss_pred             ch-----hHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccC--CCcCHHHH
Confidence            11     232222 2244444433    3568999999999665422100 0   00000  00011111  36799999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.++++... ..|.+|++.++.
T Consensus       228 A~~v~~L~s~~a~~itG~~i~vdGG~  253 (280)
T 3tox_A          228 AEAALYLASDGASFVTGAALLADGGA  253 (280)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCccccCCcCcEEEECCCc
Confidence            9999999875433 468999999885

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.70  E-value=2.1e-16  Score=152.53  Aligned_cols=216  Identities=11%  Similarity=0.104  Sum_probs=140.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.......    .....++.++.+|++|.+++.++++ 
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS----GVSEKQVNSVVADVTTEDGQDQIINS   79 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCGGGEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc----CCCCcceEEEEecCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999987655443221110    0001156789999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC---------------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCC
Q 044905           81 ------NAGKVVVTIGPTEDGP---------------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~---------------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~  135 (427)
                            ++|+|||++|.....+               .+++|+.++.++++++..    .+ .+||++||...+...   
T Consensus        80 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~---  155 (280)
T 1xkq_A           80 TLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA---  155 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC---
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC---
Confidence                  6899999999654321               345677888888887754    35 799999987642211   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc----------ceEEe-cccccCCC
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY----------NVVVS-AEASVDAN  200 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~----------~i~~~-~~~~~~~~  200 (427)
                       ..+.     ..|+.+| .+.+.+.+.+    ...|++++.|+||++.........          ..... ....+.. 
T Consensus       156 -~~~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-  227 (280)
T 1xkq_A          156 -QPDF-----LYYAIAK-AALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG-  227 (280)
T ss_dssp             -CCSS-----HHHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS-
T ss_pred             -CCcc-----cHHHHHH-HHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCC-
Confidence             0111     1233222 2344444443    357999999999966432110000          00000 0001111 


Q ss_pred             CCcccHHHHHHHHHHHhcCc-c-cccCcEEEEecCC
Q 044905          201 DYKVAKSQIASLVADVFSNT-A-VAENKVVKVFTDP  234 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~-~-~~~g~~~nI~~~~  234 (427)
                       .+.+.+|||++++.+++.. . -..|..+++.++.
T Consensus       228 -~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~  262 (280)
T 1xkq_A          228 -AAGKPEHIANIILFLADRNLSFYILGQSIVADGGT  262 (280)
T ss_dssp             -SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             -CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCc
Confidence             3789999999999988643 2 2468899998874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.70  E-value=1.1e-15  Score=147.23  Aligned_cols=213  Identities=19%  Similarity=0.179  Sum_probs=139.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+.. ..+.+......       ...++.++.+|++|.+++.++++ 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-------AGGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHH
Confidence            4578999999999999999999999999999877653 33333222111       12356689999999999888776 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            ++|++||++|.....+           .+++|+.++.++++++...  ...+||++||+.....    ...+..
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----~~~~~~  178 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----PWPGIS  178 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----CSTTCH
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----CCCCch
Confidence                  7899999999765432           4567888999999988765  4568999987642111    011111


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEE-ecccccCCCCCcccHHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVV-SAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           .|+.+| .+.+.+.+.+    ...|+++..|+||++............. .....+..  .+.+.+|||++++.+
T Consensus       179 -----~Y~asK-aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--r~~~pedvA~~v~fL  250 (271)
T 3v2g_A          179 -----LYSASK-AALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATG--SYGEPQDIAGLVAWL  250 (271)
T ss_dssp             -----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTS--SCBCHHHHHHHHHHH
T ss_pred             -----HHHHHH-HHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCC--CCCCHHHHHHHHHHH
Confidence                 233222 2344444433    3568999999999665422211000000 00011111  367899999999998


Q ss_pred             hcCccc-ccCcEEEEecCC
Q 044905          217 FSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       217 l~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.... ..|..+++.++.
T Consensus       251 ~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          251 AGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTT
T ss_pred             hCcccCCccCCEEEeCcCc
Confidence            874333 368899988763

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.70  E-value=6.2e-16  Score=147.42  Aligned_cols=213  Identities=13%  Similarity=0.106  Sum_probs=142.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++..+++  
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----------GPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHHHHH
Confidence            3478999999999999999999999999999999987665553321          1345689999999988886654  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           ++|++||++|.....+           .+++|+.++.++++++...  .-.+||++||.+.+.+.     .+.  
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~--  149 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----PGM--  149 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----TTB--
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----CCc--
Confidence                 6899999999765432           4678888999999988764  23589999887632211     111  


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC--ccceEE------ecccccCCCCCcccHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES--SYNVVV------SAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~--~~~i~~------~~~~~~~~~~~~i~v~DVA  210 (427)
                         ..|+.+| .+.+.+.+.+.    ..|+++..|+||++.......  ......      .....+..  .+.+.+|||
T Consensus       150 ---~~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA  223 (255)
T 4eso_A          150 ---SVYSASK-AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK--RNGTADEVA  223 (255)
T ss_dssp             ---HHHHHHH-HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTS--SCBCHHHHH
T ss_pred             ---hHHHHHH-HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCC--CCcCHHHHH
Confidence               2233222 23444444443    458999999999665422110  000000      00001111  367899999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCCh
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPA  238 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~  238 (427)
                      ++++.+++...-..|..+++.++...+.
T Consensus       224 ~~v~~L~s~~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          224 RAVLFLAFEATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             HHHHHHHHTCTTCCSCEEEESTTTTTTB
T ss_pred             HHHHHHcCcCcCccCCEEEECCCccccC
Confidence            9999988753234689999998864443

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.70  E-value=3.1e-16  Score=150.12  Aligned_cols=211  Identities=16%  Similarity=0.151  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|+++. |+.............       ...++.++.+|++|.+++.++++ 
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA-------NGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-------cCCceEEEEecCCCHHHHHHHHHH
Confidence            456899999999999999999999999997766 554444333222111       12456789999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH-----HcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ-----LAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~-----~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++.     ..+..+||++||.+.+.+.     .
T Consensus        98 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  172 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN-----R  172 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----T
T ss_pred             HHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----C
Confidence                  7899999999765432           45678888888888773     4567799999887632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEE-ecccccCCCCCcccHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVV-SAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~-~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      +..     .|+.++ .+.+.+.+    .+...|+++..++||++............. .....+..  .+.+.+|+|+++
T Consensus       173 ~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~--~~~~~edva~~~  244 (267)
T 4iiu_A          173 GQV-----NYSAAK-AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMK--RMGQAEEVAGLA  244 (267)
T ss_dssp             TCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTC--SCBCHHHHHHHH
T ss_pred             CCc-----hhHHHH-HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            111     232222 22333333    333568999999999665432211100000 00011111  367999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecC
Q 044905          214 ADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+++.... ..|..+++.++
T Consensus       245 ~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          245 SYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             HHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCCcccCccCCEEEeCCC
Confidence            999875332 46889998876

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.70  E-value=4.3e-16  Score=150.17  Aligned_cols=224  Identities=14%  Similarity=0.054  Sum_probs=142.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc------------chHHHHHHHHhhhhhhhhhhhccceEEEecCC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL------------GAAQELARLAASYKILSKEELKRLNAVESNFD   70 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~------------~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~   70 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.            .....+......       ...++.++.+|++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~   81 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-------TGRKAYTAEVDVR   81 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-------TTSCEEEEECCTT
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-------cCCceEEEEccCC
Confidence            456899999999999999999999999999999872            222222111100       1246678999999


Q ss_pred             CHHHHHHHhc-------CcCEEEEccCCCCCC---------CCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccc
Q 044905           71 SAESIAKAIG-------NAGKVVVTIGPTEDG---------PTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        71 D~~sl~~al~-------g~d~Vi~~ag~~~~~---------~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~  132 (427)
                      |.+++.++++       ++|++||++|.....         ..+++|+.++.++++++...  +..+||++||.+.+.+.
T Consensus        82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA  161 (287)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc
Confidence            9999888775       799999999975432         15678888999999998765  34589999887643222


Q ss_pred             cCCC-CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc---ceE----Eec-------
Q 044905          133 TYNV-LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY---NVV----VSA-------  193 (427)
Q Consensus       133 ~~~~-~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~---~i~----~~~-------  193 (427)
                      .... ....+......|+.+| .+.+.+.+.+.    ..|+++..|+||++.........   .+.    ...       
T Consensus       162 ~~~~~~~~~~~~~~~~Y~asK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T 3pxx_A          162 AQPPGAGGPQGPGGAGYSYAK-QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA  240 (287)
T ss_dssp             HCCC-----CHHHHHHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             cccccccccCCCccchHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh
Confidence            1111 1111111223344333 33444444443    45899999999965432211000   000    000       


Q ss_pred             -ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          194 -EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       194 -~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                       ......+..+.+.+|||++++.++++... ..|..+++.++.
T Consensus       241 ~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~  283 (287)
T 3pxx_A          241 FPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA  283 (287)
T ss_dssp             GGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence             00001112478999999999999874333 368899998874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.70  E-value=2.1e-16  Score=152.37  Aligned_cols=211  Identities=16%  Similarity=0.119  Sum_probs=138.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.. ...+......       ...++.++.+|++|.+++.++.+  
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIAD-------GGGSAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHT-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999997643 2222221111       12456789999999988877654  


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||...+.+.     .+..
T Consensus       102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----~~~~  176 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-----RNVA  176 (273)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----SSCH
T ss_pred             HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-----CCCh
Confidence                7999999999765433           4567888888888876    44577899999987642211     1111


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCcc--ceEEe--cccccCCCCCcccHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSY--NVVVS--AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~--~i~~~--~~~~~~~~~~~i~v~DVA~~v  213 (427)
                           .|+.+| .+.+.+.+.+.    ..|+++..|+||++.........  .-...  ....+..  .+.+.+|||+++
T Consensus       177 -----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedva~~v  248 (273)
T 3uf0_A          177 -----AYAASK-HAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAG--RWATPEDMVGPA  248 (273)
T ss_dssp             -----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTS--SCBCGGGGHHHH
T ss_pred             -----hHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCC--CCCCHHHHHHHH
Confidence                 233222 23444444433    47899999999976542110000  00000  0011111  368899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+++.... ..|..+++.++.
T Consensus       249 ~~L~s~~a~~itG~~i~vdGG~  270 (273)
T 3uf0_A          249 VFLASDAASYVHGQVLAVDGGW  270 (273)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHhCchhcCCcCCEEEECcCc
Confidence            998875332 368999998874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.70  E-value=1.6e-16  Score=149.69  Aligned_cols=204  Identities=16%  Similarity=0.141  Sum_probs=132.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----   79 (427)
                      .++|+||||||+||+++++.|+++|++|++++|+.++...  ..+             +.++.+|++| +++.+++    
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~-------------~~~~~~D~~~-~~~~~~~~~~~   65 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--SLG-------------AVPLPTDLEK-DDPKGLVKRAL   65 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH--HHT-------------CEEEECCTTT-SCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH--hhC-------------cEEEecCCch-HHHHHHHHHHH
Confidence            4689999999999999999999999999999999865211  111             2478999998 6665544    


Q ss_pred             ---cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           80 ---GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 ---~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         .++|++||++|.....+           .+++|+.++.++++++    ++.+.++||++||.+.+.+..   ..+. 
T Consensus        66 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---~~~~-  141 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---PVPI-  141 (239)
T ss_dssp             HHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---TSCC-
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---CCCC-
Confidence               47999999999754322           3456777877777776    446788999999876432210   0111 


Q ss_pred             ccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc---ceEEe-cccccCCCCCcccHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY---NVVVS-AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~---~i~~~-~~~~~~~~~~~i~v~DVA~~v  213 (427)
                          ..|+.+| .+.+.+.+.+    ...|+++++|+||++.........   ..... ....+..  .+.+.+|+|+++
T Consensus       142 ----~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~dvA~~~  214 (239)
T 2ekp_A          142 ----PAYTTAK-TALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMG--RWARPEEIARVA  214 (239)
T ss_dssp             ----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTS--SCBCHHHHHHHH
T ss_pred             ----ccHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence                2233222 2344444433    356899999999966442110000   00000 0001111  368999999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.++++... ..|..+.+.++.
T Consensus       215 ~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          215 AVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTT
T ss_pred             HHHcCchhcCCCCCEEEECCCc
Confidence            999875333 368888888773

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.69  E-value=1.3e-16  Score=151.74  Aligned_cols=210  Identities=17%  Similarity=0.140  Sum_probs=135.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++..++|+||||||+||+++++.|+++|++|++++|+.+....+....          ..++.++.+|++|.+++.++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~   72 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----------GERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----------CTTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------CCceEEEEccCCCHHHHHHHHH
Confidence            356689999999999999999999999999999999976655443211          1244688999999998887765


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             .+|+|||++|.....+           .+++|+.++.++.+    .+++.+ .+||++||.+.+.+.     .
T Consensus        73 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~  146 (253)
T 1hxh_A           73 AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-----E  146 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-----T
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-----C
Confidence                   4699999999754322           34556555555544    445567 899999987643211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh----cC--CCeEEEEeCCCCCCCC-----CCCccce-EEec-ccccCCCCCccc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI----ET--DVSYTFIKTSLTEDFS-----PESSYNV-VVSA-EASVDANDYKVA  205 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~----~~--gl~~tilRPG~~~~~~-----~~~~~~i-~~~~-~~~~~~~~~~i~  205 (427)
                      +.     ..|+.++ .+.+.+.+.+.    ..  |+++++||||.+....     .+....- .... ...+..  .+.+
T Consensus       147 ~~-----~~Y~~sK-~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~  218 (253)
T 1hxh_A          147 QY-----AGYSASK-AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG--RAYM  218 (253)
T ss_dssp             TB-----HHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTC--CEEC
T ss_pred             CC-----ccHHHHH-HHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccC--CCCC
Confidence            11     1233322 23444444443    23  8999999999543211     0000000 0000 011111  3679


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+|+|++++.++++... ..|..+++.++.
T Consensus       219 ~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          219 PERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            99999999999875432 368889988874

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.69  E-value=1.7e-16  Score=152.10  Aligned_cols=201  Identities=13%  Similarity=0.075  Sum_probs=135.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||||+||+++++.|+++|++|++++|+...       +           .++.++.+|++|.+++.++++ 
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~-----------~~~~~~~~Dl~~~~~v~~~~~~   67 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------E-----------AKYDHIECDVTNPDQVKASIDH   67 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------S-----------CSSEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------C-----------CceEEEEecCCCHHHHHHHHHH
Confidence            345789999999999999999999999999999998754       1           133589999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|+|||++|....++           .+++|+.++.++++++..    .+..+||++||.+.+.+.     .+
T Consensus        68 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  142 (264)
T 2dtx_A           68 IFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-----KN  142 (264)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----CC
Confidence                  7999999999754322           456788888888887754    467899999987642211     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-------c-----ceEE-ecccccCCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-------Y-----NVVV-SAEASVDANDY  202 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-------~-----~i~~-~~~~~~~~~~~  202 (427)
                      .     ..|+.+| .+.+.+.+.+.    .. +++++|+||++........       .     .... .....+..  .
T Consensus       143 ~-----~~Y~~sK-~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~  213 (264)
T 2dtx_A          143 A-----SAYVTSK-HAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQ--R  213 (264)
T ss_dssp             B-----HHHHHHH-HHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTS--S
T ss_pred             c-----hhHHHHH-HHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCC--C
Confidence            1     2233322 23455554443    34 9999999996643211000       0     0000 00001111  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+|||++++.+++.... ..|..+++.++.
T Consensus       214 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          214 IGKPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            78999999999999875322 368889888774

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.69  E-value=4.7e-16  Score=145.47  Aligned_cols=188  Identities=12%  Similarity=0.084  Sum_probs=126.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA-   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~-   82 (427)
                      |++|+||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++.++++.+ 
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~~~~~   70 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------SNNVGYRARDLASHQEVEQLFEQLD   70 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------SSCCCEEECCTTCHHHHHHHHHSCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------hhccCeEeecCCCHHHHHHHHHHHh
Confidence            568999999999999999999999999999999987665553321          235668999999999999998765 


Q ss_pred             ---CEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCC---CeEEEEecccccccccCCCCCCCCccch
Q 044905           83 ---GKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGV---GHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        83 ---d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gV---k~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                         |+|||++|....++           .+++|+.++.++++++...-.   .+||++||...+.+.     .+..    
T Consensus        71 ~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-----~~~~----  141 (230)
T 3guy_A           71 SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK-----AQES----  141 (230)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC-----TTCH----
T ss_pred             hcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC-----CCCc----
Confidence               89999999765432           457888899999888765422   289999887632211     1111    


Q ss_pred             hhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          146 NLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                       .|+.++ .+.+.+.+.+.    ..|+++..++||++.......   .   .......  .+.+.+|+|++++.++.++
T Consensus       142 -~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~---~~~~~~~--~~~~~~dvA~~i~~l~~~~  210 (230)
T 3guy_A          142 -TYCAVK-WAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET---S---GKSLDTS--SFMSAEDAALMIHGALANI  210 (230)
T ss_dssp             -HHHHHH-HHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------CCCHHHHHHHHHHHCCEE
T ss_pred             -hhHHHH-HHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh---c---CCCCCcc--cCCCHHHHHHHHHHHHhCc
Confidence             233222 23444444443    458999999999665422111   0   0011111  4789999999999988744

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.69  E-value=3e-16  Score=151.68  Aligned_cols=209  Identities=14%  Similarity=0.144  Sum_probs=140.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++.++++  
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----------GCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------CCcceEEEecCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999987655543321          1345689999999998887765  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++..    .+..+||++||.....+.     .+.
T Consensus        98 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----~~~  172 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV-----GGT  172 (277)
T ss_dssp             HHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----TTB
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----CCc
Confidence                 6899999999765322           556788888888887744    566789999987632111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc----eEEec--c---cccCCCCCcccHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN----VVVSA--E---ASVDANDYKVAKS  207 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~----i~~~~--~---~~~~~~~~~i~v~  207 (427)
                           ..|+.+| .+.+.+.+.+    ...|+++..|+||.+..........    .....  .   ..+..  .+.+.+
T Consensus       173 -----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~pe  244 (277)
T 3gvc_A          173 -----GAYGMSK-AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQG--RMAAPE  244 (277)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHS--SCBCHH
T ss_pred             -----hhHHHHH-HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhcccc--CCCCHH
Confidence                 2233322 2344444433    3578999999999665321100000    00000  0   00111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.++++... ..|..+++.++.
T Consensus       245 dvA~~v~~L~s~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          245 EMAGIVVFLLSDDASMITGTTQIADGGT  272 (277)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCccCCccCcEEEECCcc
Confidence            999999999875432 368899998874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.69  E-value=2e-16  Score=151.50  Aligned_cols=212  Identities=13%  Similarity=0.123  Sum_probs=140.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+.++.+......       ...++.++.+|++|.+++.++++ 
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~   81 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-------TGRRALSVGTDITDDAQVAHLVDE   81 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998766555332211       12356789999999999888775 


Q ss_pred             ------CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|... ..+           .+++|+.++.++++++..    .+ .+||++||...+.+.     .
T Consensus        82 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~  155 (264)
T 3ucx_A           82 TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ-----A  155 (264)
T ss_dssp             HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC-----T
T ss_pred             HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC-----C
Confidence                  6899999998742 222           456788888888887643    34 699999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc------------ceE-EecccccCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY------------NVV-VSAEASVDAND  201 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~------------~i~-~~~~~~~~~~~  201 (427)
                      +..     .|+.+| .+.+.+.+.+    ...|+++..|+||++.........            .+. ......+..  
T Consensus       156 ~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--  227 (264)
T 3ucx_A          156 KYG-----AYKMAK-SALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLK--  227 (264)
T ss_dssp             TCH-----HHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSS--
T ss_pred             ccH-----HHHHHH-HHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcc--
Confidence            111     232222 2234444433    357899999999966431100000            000 000111111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+.+.+|||++++.++++... ..|.++++.++.
T Consensus       228 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          228 RLPTEDEVASAILFMASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             SCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            377999999999998875432 368999998875

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.69  E-value=9.7e-17  Score=152.14  Aligned_cols=207  Identities=12%  Similarity=0.049  Sum_probs=133.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      |++|+||||||+||+++++.|+++|++|++++|+..+...                    .+.+|++|.+++.++++.  
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------------------~~~~Dl~~~~~v~~~~~~~~   60 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------------------DLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------------CTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------------------ccccCCCCHHHHHHHHHHhC
Confidence            5689999999999999999999999999999998754210                    145789999999988854  


Q ss_pred             --cCEEEEccCCCC-CCC---CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCC-------------
Q 044905           82 --AGKVVVTIGPTE-DGP---TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLD-------------  138 (427)
Q Consensus        82 --~d~Vi~~ag~~~-~~~---~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~-------------  138 (427)
                        +|+|||++|... .++   .+++|+.++.++++++.    +.+..+||++||.+.+.....+...             
T Consensus        61 ~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (257)
T 1fjh_A           61 KGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKAR  140 (257)
T ss_dssp             TCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred             CCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhh
Confidence              599999999765 332   56788889999888875    4567899999988754211100000             


Q ss_pred             -----CCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEEecc----cccCCCCCcc
Q 044905          139 -----GISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVVSAE----ASVDANDYKV  204 (427)
Q Consensus       139 -----~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~~~~----~~~~~~~~~i  204 (427)
                           ..+......|+.+| .+.+.+.+.+.    ..|++++.|+||++........ ........    ..+..  .+.
T Consensus       141 ~~~~~~~~~~~~~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~  217 (257)
T 1fjh_A          141 AIVEHAGEQGGNLAYAGSK-NALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG--RRA  217 (257)
T ss_dssp             HHHHTCCTTHHHHHHHHHH-HHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT--SCC
T ss_pred             hhhhcccCCCCccHHHHHH-HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccC--CCC
Confidence                 00111223444443 34555554443    4689999999996543211110 00000000    01111  378


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+|+|++++.++..+.. ..|..+.+.++
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            999999999999875422 35788888877

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.69  E-value=2.1e-16  Score=150.95  Aligned_cols=211  Identities=11%  Similarity=0.088  Sum_probs=135.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......       ...++.++.+|++|.+++.++++ 
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   77 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-------KGVEARSYVCDVTSEEAVIGTVDS   77 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-------TTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHHHHH
Confidence            4567899999999999999999999999999999998765544322111       01345689999999998877665 


Q ss_pred             ------CcCEEEEccCCC-CCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPT-EDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~-~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|+|||++|.. ...+           .+++|+.++.++++++..    .+..+||++||.+.+.+.     .
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  152 (262)
T 1zem_A           78 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP-----P  152 (262)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC-----T
T ss_pred             HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----C
Confidence                  789999999975 2221           456778888888877654    467799999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCc-------------c--ce-EEe--cccc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESS-------------Y--NV-VVS--AEAS  196 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~-------------~--~i-~~~--~~~~  196 (427)
                      +..     .|+.++ .+.+.+.+.    +...|++++.|+||++........             .  .- ...  ....
T Consensus       153 ~~~-----~Y~asK-~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (262)
T 1zem_A          153 NMA-----AYGTSK-GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV  226 (262)
T ss_dssp             TBH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred             CCc-----hHHHHH-HHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcC
Confidence            111     222222 223333333    345789999999996654211000             0  00 000  0001


Q ss_pred             cCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEec
Q 044905          197 VDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFT  232 (427)
Q Consensus       197 ~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~  232 (427)
                      +..  .+.+.+|||++++.+++.... ..|..+.+.+
T Consensus       227 p~~--r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          227 PMR--RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             TTS--SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             CCC--CCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            111  367899999999998875433 3577777754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.69  E-value=2.8e-16  Score=150.06  Aligned_cols=212  Identities=16%  Similarity=0.119  Sum_probs=137.7

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++|+||||+  |+||+++++.|+++|++|++++|+......+......        ..++.++.+|++|.+++.+++
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--------~~~~~~~~~D~~~~~~v~~~~   77 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA--------LGGALLFRADVTQDEELDALF   77 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHH--------TTCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--------cCCcEEEECCCCCHHHHHHHH
Confidence            455789999999  9999999999999999999999987521122111110        123468999999999988877


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~  135 (427)
                      +       ++|+|||++|....    .+           .+++|+.++.++++++...-  -.+||++||.+.+...   
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---  154 (261)
T 2wyu_A           78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---  154 (261)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---
T ss_pred             HHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC---
Confidence            6       78999999997542    11           45678889999999987651  2589999986532111   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~  207 (427)
                        .+.     ..|+.+| .+.+.+.+.+.    ..|++++.|+||.+...........  ...  ....+..  .+.+.+
T Consensus       155 --~~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~  224 (261)
T 2wyu_A          155 --PKY-----NVMAIAK-AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR--RNITQE  224 (261)
T ss_dssp             --TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTS--SCCCHH
T ss_pred             --CCc-----hHHHHHH-HHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCC--CCCCHH
Confidence              111     1233322 23444444433    4689999999996654211100000  000  0001111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |+|++++.+++.... ..|..|++.++.
T Consensus       225 dva~~v~~l~s~~~~~~tG~~~~vdgG~  252 (261)
T 2wyu_A          225 EVGNLGLFLLSPLASGITGEVVYVDAGY  252 (261)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcChhhcCCCCCEEEECCCc
Confidence            999999998874332 358899998885

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.69  E-value=5.4e-16  Score=152.83  Aligned_cols=210  Identities=20%  Similarity=0.119  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC----------cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE----------LGAAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~----------~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+          ......+......       ...++.++.+|++|.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-------AGGEAVADGSNVADW   98 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-------TTCEEEEECCCTTSH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh-------cCCcEEEEECCCCCH
Confidence            34689999999999999999999999999999987          4444333222111       023556889999999


Q ss_pred             HHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcC----------CCeEEEEe
Q 044905           73 ESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAG----------VGHVAIIY  124 (427)
Q Consensus        73 ~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~g----------Vk~~V~vS  124 (427)
                      +++.++++       ++|++||++|.....+           .+++|+.++.++++++...-          -.+||++|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is  178 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS  178 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence            99888775       7899999999765432           46788889888888875431          14899998


Q ss_pred             cccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCC
Q 044905          125 DGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDAN  200 (427)
Q Consensus       125 Ss~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~  200 (427)
                      |.+.+.+.     .+..     .|+.+| .+.+.+.+.+.    ..|+++..|+||...+...........    .....
T Consensus       179 S~~~~~~~-----~~~~-----~Y~asK-aal~~l~~~la~e~~~~gI~vn~v~PG~~t~~~~~~~~~~~~----~~~~~  243 (322)
T 3qlj_A          179 SGAGLQGS-----VGQG-----NYSAAK-AGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMA----TQDQD  243 (322)
T ss_dssp             CHHHHHCB-----TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECTTSCCSCCSCCC------------
T ss_pred             CHHHccCC-----CCCc-----cHHHHH-HHHHHHHHHHHHHhcccCcEEEEecCCCCCccchhhhhhhhh----ccccc
Confidence            87632211     1111     233222 23444444433    478999999999322222111111110    11111


Q ss_pred             CCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          201 DYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..+++.+|||++++.+++.... ..|..|++.++.
T Consensus       244 ~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  278 (322)
T 3qlj_A          244 FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGK  278 (322)
T ss_dssp             CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTE
T ss_pred             cCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            2357899999999999874432 368899998875

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=3.7e-16  Score=150.09  Aligned_cols=190  Identities=12%  Similarity=0.071  Sum_probs=129.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+....+.+......       ...++.++.+|++|.+++.++++  
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~  102 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-------LGAKVHTFVVDCSNREDIYSSAKKV  102 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-------cCCeEEEEEeeCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765544322111       02356789999999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|+|||++|.....+           .+++|+.++.++++++    ++.+.++||++||.+.+.+.        
T Consensus       103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  174 (272)
T 1yb1_A          103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV--------  174 (272)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH--------
T ss_pred             HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC--------
Confidence                 7899999999765432           4567777877766655    45678899999987643211        


Q ss_pred             CccchhhhhccccccHHHHHHHHh-------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI-------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~-------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                        .....|+.++ .+.+.+.+.+.       ..|+++++|+||++.......        ......  .+++.+|+|+.+
T Consensus       175 --~~~~~Y~~sK-~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--------~~~~~~--~~~~~~dva~~i  241 (272)
T 1yb1_A          175 --PFLLAYCSSK-FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--------PSTSLG--PTLEPEEVVNRL  241 (272)
T ss_dssp             --HHHHHHHHHH-HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--------THHHHC--CCCCHHHHHHHH
T ss_pred             --CCchhHHHHH-HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--------cccccc--CCCCHHHHHHHH
Confidence              1112333333 33444444433       348999999999543221100        001111  378999999999


Q ss_pred             HHHhcCc
Q 044905          214 ADVFSNT  220 (427)
Q Consensus       214 ~~al~~~  220 (427)
                      +.++..+
T Consensus       242 ~~~~~~~  248 (272)
T 1yb1_A          242 MHGILTE  248 (272)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHcC
Confidence            9998753

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.68  E-value=4.8e-16  Score=147.57  Aligned_cols=204  Identities=14%  Similarity=0.138  Sum_probs=130.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCC-CHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFD-SAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~-D~~sl~~al~   80 (427)
                      ...++|+||||||+||+++++.|+++|++|++++|+.+....+   +            ++.++ +|+. +.+.+.+.+.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~---~------------~~~~~-~D~~~~~~~~~~~~~   80 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS---G------------HRYVV-CDLRKDLDLLFEKVK   80 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT---C------------SEEEE-CCTTTCHHHHHHHSC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh---C------------CeEEE-eeHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999986332221   1            22356 9983 4555555566


Q ss_pred             CcCEEEEccCCCCCCC-----------CccccHHHHHHH----HHHHHHcCCCeEEEEecccccccccCCCCCCCCccch
Q 044905           81 NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQV----IQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~l----l~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                      ++|+|||++|.....+           .+++|+.++.++    +..+++.+.++||++||.+.+...     .+.     
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~-----  150 (249)
T 1o5i_A           81 EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----ENL-----  150 (249)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTB-----
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----CCC-----
Confidence            8999999999754322           345666665554    455566788899999988743221     111     


Q ss_pred             hhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe-c--ccccCCCCCcccHHHHHHHHHHHhc
Q 044905          146 NLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS-A--EASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~-~--~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                      ..|+.++ .+.+.+.+.+    ...|++++.|+||++..........-... .  ...+.  ..+.+.+|+|++++.+++
T Consensus       151 ~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~--~~~~~~~dvA~~i~~l~s  227 (249)
T 1o5i_A          151 YTSNSAR-MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPM--RRMAKPEEIASVVAFLCS  227 (249)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTT--SSCBCHHHHHHHHHHHHS
T ss_pred             chHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCC--CCCcCHHHHHHHHHHHcC
Confidence            1232222 2244444433    35689999999996654221000000000 0  00111  137899999999999887


Q ss_pred             Cccc-ccCcEEEEecCC
Q 044905          219 NTAV-AENKVVKVFTDP  234 (427)
Q Consensus       219 ~~~~-~~g~~~nI~~~~  234 (427)
                      .... ..|..|++.++.
T Consensus       228 ~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          228 EKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             GGGTTCCSCEEEESTTC
T ss_pred             ccccCCCCCEEEECCCc
Confidence            5433 358899998874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.68  E-value=5e-16  Score=149.77  Aligned_cols=213  Identities=15%  Similarity=0.092  Sum_probs=140.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+...........      ....++.++.+|++|.+++.++++  
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG------ATGRRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH------HHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765443322110      112356789999999998887775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++.    +.+..+||++||.....+.     ...
T Consensus       100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  174 (277)
T 4fc7_A          100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQ-----ALQ  174 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTC-----TTC
T ss_pred             HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCC-----CCc
Confidence                 7899999999654432           45788889999988874    3456789999987632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCC-CCc---cc-eEEecccccCCCCCcccHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSP-ESS---YN-VVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~-~~~---~~-i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      .     .|+.+| .+.+.+.+.+    ...|+++..|+||++..... ...   .. ........+..  .+.+.+|||+
T Consensus       175 ~-----~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dvA~  246 (277)
T 4fc7_A          175 V-----HAGSAK-AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQ--RLGNKTEIAH  246 (277)
T ss_dssp             H-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTS--SCBCHHHHHH
T ss_pred             H-----HHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCC--CCcCHHHHHH
Confidence            1     222222 2234444333    35689999999997653210 000   00 00000011111  3679999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+++.... ..|..+++.++.
T Consensus       247 ~v~fL~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          247 SVLYLASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHcCCccCCcCCCEEEECCCc
Confidence            99999874322 468899998874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.68  E-value=7e-16  Score=150.17  Aligned_cols=212  Identities=11%  Similarity=0.065  Sum_probs=139.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+..  ..+.+......       ...++.++.+|++|.+++.++++
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~  120 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-------CGRKAVLLPGDLSDESFARSLVH  120 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-------TTCCEEECCCCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-------cCCcEEEEEecCCCHHHHHHHHH
Confidence            4578999999999999999999999999999988743  22333221111       12356688999999988877764


Q ss_pred             -------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHcCCC--eEEEEecccccccccCCCCCC
Q 044905           81 -------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLAGVG--HVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~gVk--~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             ++|++||++|.... .+           .+++|+.++.++++++...-.+  +||++||...+.+.     .+
T Consensus       121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~  195 (294)
T 3r3s_A          121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS-----PH  195 (294)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----TT
T ss_pred             HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----CC
Confidence                   78999999997542 11           5678888999999999776443  89999988743221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCC--CCC-ccceE-EecccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFS--PES-SYNVV-VSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~--~~~-~~~i~-~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      ..     .|+.+| .+.+.+.+.+    ...|+++..|+||++....  ... ..... ......+..  .+.+.+|||+
T Consensus       196 ~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dvA~  267 (294)
T 3r3s_A          196 LL-----DYAATK-AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMK--RAGQPAELAP  267 (294)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTS--SCBCGGGGHH
T ss_pred             ch-----HHHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCC--CCcCHHHHHH
Confidence            11     233222 2344444433    3568999999999664311  000 00000 000111111  3678999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+++.... ..|.+|++.++.
T Consensus       268 ~v~~L~s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          268 VYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHhCccccCCCCCEEEECCCc
Confidence            99998875433 368999998875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.68  E-value=1.7e-16  Score=150.59  Aligned_cols=210  Identities=13%  Similarity=0.070  Sum_probs=136.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~   77 (427)
                      +..++|+||||||+||+++++.|+++|++ |++++|+...  .+++....         ...++.++.+|++|. +++.+
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~---------~~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN---------PKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHC---------TTSEEEEEECCTTSCHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhC---------CCceEEEEEEecCCChHHHHH
Confidence            45678999999999999999999999996 9999998742  23332210         013566899999997 77777


Q ss_pred             Hhc-------CcCEEEEccCCCCCCC---CccccHHHHHHHHHHHHHcC-------CCeEEEEecccccccccCCCCCCC
Q 044905           78 AIG-------NAGKVVVTIGPTEDGP---TSEVSTSDAFQVIQAAQLAG-------VGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        78 al~-------g~d~Vi~~ag~~~~~~---~~~vn~~~~~~ll~Aa~~~g-------Vk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                      +++       ++|+|||++|......   .+++|+.++.++++++....       ..+||++||.+.+...     .+.
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  148 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----HQV  148 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----TTS
T ss_pred             HHHHHHHhcCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----CCc
Confidence            665       7999999999754332   56788899999999886532       3579999987643211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceE-Eecc-cccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVV-VSAE-ASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~-~~~~-~~~~~~~~~i~v~DVA~~v~  214 (427)
                           ..|+.++ .+.+.+.+.+.    ..|+++++++||++............ .... .......+..+.+|+|+.++
T Consensus       149 -----~~Y~~sK-~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~  222 (254)
T 1sby_A          149 -----PVYSASK-AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV  222 (254)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHH
T ss_pred             -----hHHHHHH-HHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHH
Confidence                 1233332 33455554443    36899999999965431100000000 0000 00001123558999999999


Q ss_pred             HHhcCcccccCcEEEEecC
Q 044905          215 DVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~  233 (427)
                      .++..  ...|..|++.++
T Consensus       223 ~~~~~--~~~G~~~~v~gG  239 (254)
T 1sby_A          223 KAIEA--NKNGAIWKLDLG  239 (254)
T ss_dssp             HHHHH--CCTTCEEEEETT
T ss_pred             HHHHc--CCCCCEEEEeCC
Confidence            88862  346889999887

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.68  E-value=1.7e-15  Score=145.86  Aligned_cols=214  Identities=13%  Similarity=0.137  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC-------------cchHHHHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE-------------LGAAQELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~-------------~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+             ...+..+......       ...++.++.+|+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~   82 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA-------ANRRIVAAVVDT   82 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH-------TTCCEEEEECCT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh-------cCCeEEEEECCC
Confidence            45789999999999999999999999999999983             3333332221111       124567899999


Q ss_pred             CCHHHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecc
Q 044905           70 DSAESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDG  126 (427)
Q Consensus        70 ~D~~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs  126 (427)
                      +|.+++.++++       ++|++||++|.....+           .+++|+.++.++++++..    .+ -.+||++||.
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  162 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA  162 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence            99998888764       5899999999765432           457788888888887543    33 4689999987


Q ss_pred             cccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc--ceE-----Eec--
Q 044905          127 NTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY--NVV-----VSA--  193 (427)
Q Consensus       127 ~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~--~i~-----~~~--  193 (427)
                      ..+.+.     ....     .|+.+| .+.+.+.+.+    ...|+++..|+||++.........  ...     ...  
T Consensus       163 ~~~~~~-----~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  231 (277)
T 3tsc_A          163 AGMKMQ-----PFMI-----HYTASK-HAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLS  231 (277)
T ss_dssp             GGTSCC-----SSCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGT
T ss_pred             hhCCCC-----CCch-----hhHHHH-HHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHH
Confidence            632211     1111     232222 2244444433    356899999999966542211000  000     000  


Q ss_pred             -ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          194 -EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       194 -~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                       ......+..+.+.+|||++++.++++... ..|..+++.++.
T Consensus       232 ~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          232 HVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             TTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence             00011112377999999999999875433 368899998873

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.68  E-value=9.5e-16  Score=148.08  Aligned_cols=213  Identities=17%  Similarity=0.120  Sum_probs=139.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+... .+.+......       ...++.++.+|++|.+++.++++ 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~  100 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-------NGSDAACVKANVGVVEDIVRMFEE  100 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-------hCCCeEEEEcCCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999998753 2222211110       01345689999999988877664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            ++|+|||++|.....+           .+++|+.++.++++++...  +..+||++||.+...+.    ..+. 
T Consensus       101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----~~~~-  175 (283)
T 1g0o_A          101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----VPKH-  175 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----CSSC-
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----CCCC-
Confidence                  6899999999764322           4678888999999999876  67899999987632111    0011 


Q ss_pred             ccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc------------cceEE-ecc--cccCCCCC
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS------------YNVVV-SAE--ASVDANDY  202 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~------------~~i~~-~~~--~~~~~~~~  202 (427)
                          ..|+.+| .+.+.+.+.+.    ..|+++++|+||++........            ..... ...  ..+..  .
T Consensus       176 ----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r  248 (283)
T 1g0o_A          176 ----AVYSGSK-GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR--R  248 (283)
T ss_dssp             ----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC--S
T ss_pred             ----cchHHHH-HHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCC--C
Confidence                2233322 23444444433    5689999999996543210000            00000 000  11111  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+.+|||++++.+++.... ..|..+++.++.
T Consensus       249 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          249 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            67999999999999875432 367888887763

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.68  E-value=1.8e-16  Score=152.67  Aligned_cols=212  Identities=11%  Similarity=0.075  Sum_probs=141.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+.+....+......       ...++.++.+|++|.+++.++++  
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~   97 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN-------VGHDAEAVAFDVTSESEIIEAFARL   97 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-------TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765544332111       12356688999999999888876  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++..    .+..+||++||.....+.     .+.
T Consensus        98 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~-----~~~  172 (271)
T 4ibo_A           98 DEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR-----ATV  172 (271)
T ss_dssp             HHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----TTC
T ss_pred             HHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-----CCc
Confidence                 7899999999765432           467788888888776644    466799999987632111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc---ceE-EecccccCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY---NVV-VSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~---~i~-~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      .     .|+.+| .+.+.+.+.+    ...|+++..|+||++.........   ... ......+..  .+.+.+|||++
T Consensus       173 ~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedva~~  244 (271)
T 4ibo_A          173 A-----PYTVAK-GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAK--RWGKPQELVGT  244 (271)
T ss_dssp             H-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTC--SCBCGGGGHHH
T ss_pred             h-----hHHHHH-HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCC--CCcCHHHHHHH
Confidence            1     233222 2244444443    357899999999976542211000   000 000011111  36789999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.+++.... ..|..+++.++.
T Consensus       245 v~~L~s~~~~~itG~~i~vdGG~  267 (271)
T 4ibo_A          245 AVFLSASASDYVNGQIIYVDGGM  267 (271)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHhCccccCCCCcEEEECCCe
Confidence            9998875433 368899998874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.68  E-value=1.5e-15  Score=146.84  Aligned_cols=211  Identities=10%  Similarity=0.088  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++|+||||+  |+||+++++.|+++|++|++++|+......+......        ..++.++.+|++|.+++.++++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--------~~~~~~~~~Dl~~~~~v~~~~~   91 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKG--------FGSDLVVKCDVSLDEDIKNLKK   91 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh--------cCCeEEEEcCCCCHHHHHHHHH
Confidence            34689999999  9999999999999999999999987521122111110        1234689999999999888775


Q ss_pred             -------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHcC---CCeEEEEecccccccccCC
Q 044905           81 -------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLAG---VGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~g---Vk~~V~vSSs~v~~~~~~~  135 (427)
                             ++|+|||++|....    .+           .+++|+.++.++++++...-   ..+||++||.+.+.+.   
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---  168 (285)
T 2p91_A           92 FLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---  168 (285)
T ss_dssp             HHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC---
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC---
Confidence                   68999999997542    11           45678889999999987653   3799999986632111   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~  207 (427)
                        .+..     .|+.++ .+.+.+.+.+    ...|++++.|+||++...........  ...  ....+..  .+.+.+
T Consensus       169 --~~~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~  238 (285)
T 2p91_A          169 --PHYN-----VMGIAK-AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFG--KPITIE  238 (285)
T ss_dssp             --TTTT-----HHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTS--SCCCHH
T ss_pred             --CCcc-----HHHHHH-HHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCC--CCcCHH
Confidence              1111     233222 2344444433    35689999999996654221100000  000  0001111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |+|++++.++..... ..|..|++.++.
T Consensus       239 dva~~~~~l~s~~~~~~tG~~~~vdgg~  266 (285)
T 2p91_A          239 DVGDTAVFLCSDWARAITGEVVHVDNGY  266 (285)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence            999999999874322 357889988873

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.68  E-value=5.8e-16  Score=150.54  Aligned_cols=212  Identities=9%  Similarity=0.038  Sum_probs=140.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|+++.|+.... ..+......       ...++.++.+|++|.+++.++++ 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~  118 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK-------EGVKCVLLPGDLSDEQHCKDIVQE  118 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-------TTCCEEEEESCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-------cCCcEEEEECCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987642 222221111       12356789999999998888775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            ++|++||++|.... .+           .+++|+.++.++++++...  ...+||++||...+.+..     +.
T Consensus       119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----~~  193 (291)
T 3ijr_A          119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----TL  193 (291)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----TC
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----CC
Confidence                  68999999996532 11           5678888999999999765  245899998876432211     11


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-ccc--eEEecccccCCCCCcccHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-SYN--VVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~~~--i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .     .|+.+| .+.+.+.+.+.    ..|+++..|+||++....... ...  ........+..  .+.+.+|||+++
T Consensus       194 ~-----~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dvA~~v  265 (291)
T 3ijr_A          194 I-----DYSATK-GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQ--RPGQPYELAPAY  265 (291)
T ss_dssp             H-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTS--SCBCGGGTHHHH
T ss_pred             h-----hHHHHH-HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCC--CCcCHHHHHHHH
Confidence            1     233222 23444444433    568999999999665421100 000  00000111111  367899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+++.... ..|..+++.++.
T Consensus       266 ~~L~s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          266 VYLASSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             HHHHSGGGTTCCSCEEEESSSC
T ss_pred             HHHhCCccCCCcCCEEEECCCc
Confidence            999875433 468899998874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.68  E-value=5.4e-16  Score=149.09  Aligned_cols=209  Identities=11%  Similarity=0.032  Sum_probs=138.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+.+..+.+....           .++.++.+|++|.+++.++++ 
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~Dv~d~~~v~~~~~~   75 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------PGAVFILCDVTQEDDVKTLVSE   75 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------TTEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------cCCeEEEcCCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999987655443221           124589999999999888775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.... .+           .+++|+.++.++++++..   .+..+||++||.....+.     ..
T Consensus        76 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  150 (270)
T 1yde_A           76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ-----AQ  150 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-----TT
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-----CC
Confidence                  78999999997532 11           456788888898888753   135799999987532111     01


Q ss_pred             CCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc----cce---EEec-ccccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS----YNV---VVSA-EASVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~----~~i---~~~~-~~~~~~~~~~i~v~  207 (427)
                      ..     .|+.+| .+.+.+.+.+.    ..|+++++|+||++........    ...   .... ...+..  .+.+.+
T Consensus       151 ~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~  222 (270)
T 1yde_A          151 AV-----PYVATK-GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG--RMGQPA  222 (270)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS--SCBCHH
T ss_pred             Cc-----ccHHHH-HHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCC--CCcCHH
Confidence            11     233222 23444444433    5789999999996543210000    000   0000 001111  267899


Q ss_pred             HHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      |||++++.++++..-..|..+.+.++.
T Consensus       223 dva~~v~~L~s~~~~itG~~i~vdGG~  249 (270)
T 1yde_A          223 EVGAAAVFLASEANFCTGIELLVTGGA  249 (270)
T ss_dssp             HHHHHHHHHHHHCTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHcccCCCcCCCEEEECCCe
Confidence            999999988874323468899998885

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.67  E-value=1e-15  Score=149.50  Aligned_cols=199  Identities=14%  Similarity=0.176  Sum_probs=129.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.+.+..+......       ...++.++.+|++|.+++.++++  
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~  102 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-------QGFDAHGVVCDVRHLDEMVRLADEA  102 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCceEEEEccCCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999998766554332111       02356789999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           ++|+|||++|....++           .+++|+.++.++++++..    .+ ..+||++||.+.+.+.     .+
T Consensus       103 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  177 (301)
T 3tjr_A          103 FRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----AG  177 (301)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----TT
T ss_pred             HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----CC
Confidence                 7899999999765422           556788888888888643    44 5689999887632111     11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc---ce--E-Eecc----cccCCCCCccc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY---NV--V-VSAE----ASVDANDYKVA  205 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~---~i--~-~~~~----~~~~~~~~~i~  205 (427)
                      ..     .|+.++ .+.+.+.+.+    ...|++++.|+||++.........   ..  . ...+    ........+++
T Consensus       178 ~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (301)
T 3tjr_A          178 LG-----TYGVAK-YGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVS  251 (301)
T ss_dssp             BH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCC
T ss_pred             ch-----HHHHHH-HHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCC
Confidence            11     233222 2234444333    356899999999966532110000   00  0 0000    00001124789


Q ss_pred             HHHHHHHHHHHhcC
Q 044905          206 KSQIASLVADVFSN  219 (427)
Q Consensus       206 v~DVA~~v~~al~~  219 (427)
                      .+|||+.++.++..
T Consensus       252 pedvA~~i~~~l~~  265 (301)
T 3tjr_A          252 ADDVARLTADAILA  265 (301)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.67  E-value=2.7e-16  Score=150.80  Aligned_cols=214  Identities=12%  Similarity=0.062  Sum_probs=140.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++|+||||+|+||+++++.|+++|++|+++.|+.+.+..+......      ....++.++.+|++|.+++.++++ 
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE------QFGTDVHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------hcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998765544322111      012356789999999888877765 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|.....+           .+++|+.++.++++++..    .+ ..+||++||...+.+.     .
T Consensus        92 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~  166 (266)
T 4egf_A           92 AAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-----P  166 (266)
T ss_dssp             HHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----T
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----C
Confidence                  7999999999765432           456788888888887754    33 4589999887632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc---ceEE-ecccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY---NVVV-SAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~---~i~~-~~~~~~~~~~~~i~v~DVA  210 (427)
                      +..     .|+.+| .+.+.+.+.+    ...|+++..|+||++.........   .... .....+..  .+.+.+|||
T Consensus       167 ~~~-----~Y~asK-~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva  238 (266)
T 4egf_A          167 DHY-----AYCTSK-AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLG--RFAVPHEVS  238 (266)
T ss_dssp             TCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTS--SCBCHHHHH
T ss_pred             CCh-----HHHHHH-HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCC--CCcCHHHHH
Confidence            111     232222 2234444433    356899999999966532110000   0000 00011111  367899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++++.++++... ..|.++++.++.
T Consensus       239 ~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          239 DAVVWLASDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCccCcEEEECCCc
Confidence            999999875333 368899998873

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.67  E-value=1.6e-15  Score=144.82  Aligned_cols=215  Identities=15%  Similarity=0.108  Sum_probs=135.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||+|+||+++++.|+++|++|+++.+ +.............       ...++.++.+|++|.+++.++++
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   78 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-------LGRSALAIKADLTNAAEVEAAIS   78 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT-------TTSCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCceEEEEcCCCCHHHHHHHHH
Confidence            34578999999999999999999999999999854 44443333221111       12356789999999999888775


Q ss_pred             -------CcCEEEEccCCC-CCCC-----------CccccHHHHHHHHHHHHHcCC--CeEEEEecccccccccCCCCCC
Q 044905           81 -------NAGKVVVTIGPT-EDGP-----------TSEVSTSDAFQVIQAAQLAGV--GHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -------g~d~Vi~~ag~~-~~~~-----------~~~vn~~~~~~ll~Aa~~~gV--k~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             ++|++||++|.. ...+           .+++|+.++.++++++...-.  .+||++||...+...    ..+
T Consensus        79 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----~~~  154 (259)
T 3edm_A           79 AAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG----GPG  154 (259)
T ss_dssp             HHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC----STT
T ss_pred             HHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC----CCC
Confidence                   789999999865 2211           457888899999999877643  389999887632110    011


Q ss_pred             CCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCcc-ceEEe--cccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSY-NVVVS--AEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~-~i~~~--~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      ..     .|+.+| .+.+.+.+.+.   ..++++..+.||++......... .-...  ....+..  .+.+.+|||+++
T Consensus       155 ~~-----~Y~asK-aa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~--r~~~pedva~~v  226 (259)
T 3edm_A          155 AL-----AYATSK-GAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLK--REGSSEDVAGLV  226 (259)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------CCBCHHHHHHHH
T ss_pred             cH-----HHHHHH-HHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCC--CCcCHHHHHHHH
Confidence            11     233222 23444444433   23499999999966442211100 00000  0011111  367899999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDPS  235 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~~  235 (427)
                      +.+++.... ..|..|++.++..
T Consensus       227 ~~L~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          227 AFLASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             HHHHSGGGTTCCSCEEEESBCSS
T ss_pred             HHHcCccccCccCCEEEECCCcC
Confidence            998875432 3689999988853

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.67  E-value=1.4e-15  Score=144.57  Aligned_cols=197  Identities=9%  Similarity=0.129  Sum_probs=129.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+.++.+.......    .....++.++.+|++|.+++.++++ 
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRS----NKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH----CTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----ccccCcceEEeccCCCHHHHHHHHHH
Confidence            34578999999999999999999999999999999987665543321110    0011456789999999998887765 


Q ss_pred             ------CcCEEEEccCCCCCCC----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                            ++|++||++|.....+          .+++|+.++.++++++    ++.+..+||++||.+...+.     .+.
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  155 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-----ADG  155 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------CCT
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-----CCC
Confidence                  6899999999754322          4567788888888877    44567799999887632111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      .     .|+.+| .+.+.+.+.+    ...|+++..++||++.....   ...   ......  ..+++.+|+|++++.+
T Consensus       156 ~-----~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~---~~~---~~~~~~--~~~~~p~dva~~v~~l  221 (250)
T 3nyw_A          156 G-----IYGSTK-FALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA---KKA---GTPFKD--EEMIQPDDLLNTIRCL  221 (250)
T ss_dssp             T-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH---HHT---TCCSCG--GGSBCHHHHHHHHHHH
T ss_pred             c-----chHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh---hhc---CCCccc--ccCCCHHHHHHHHHHH
Confidence            2     222222 2234444333    35689999999997654211   000   000111  1378999999999999


Q ss_pred             hcCcc
Q 044905          217 FSNTA  221 (427)
Q Consensus       217 l~~~~  221 (427)
                      ++.+.
T Consensus       222 ~s~~~  226 (250)
T 3nyw_A          222 LNLSE  226 (250)
T ss_dssp             HTSCT
T ss_pred             HcCCC
Confidence            98653

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.67  E-value=1.9e-15  Score=143.53  Aligned_cols=207  Identities=13%  Similarity=0.109  Sum_probs=138.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC--CCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF--DSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl--~D~~sl~~al~   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+....+......      ....++.++.+|+  +|.+++.++++
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE------ETGRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------hcCCCceEEEEecccCCHHHHHHHHH
Confidence            456899999999999999999999999999999998766554332111      1112556899999  89888877765


Q ss_pred             -------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             ++|++||++|.... .+           .+++|+.++.++++++    ++.+..+||++||...+.+.     
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  159 (252)
T 3f1l_A           85 RIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-----  159 (252)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC-----
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC-----
Confidence                   68999999997422 11           4578888998888887    45677899999987632111     


Q ss_pred             CCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      .+.     ..|+.+| .+.+.+.+.+.   ...+++..|.||++.....   ... .  ...  ....+.+.+|+|.+++
T Consensus       160 ~~~-----~~Y~asK-~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~---~~~-~--~~~--~~~~~~~p~dva~~~~  225 (252)
T 3f1l_A          160 ANW-----GAYAASK-FATEGMMQVLADEYQQRLRVNCINPGGTRTAMR---ASA-F--PTE--DPQKLKTPADIMPLYL  225 (252)
T ss_dssp             TTC-----HHHHHHH-HHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH---HHH-C--TTC--CGGGSBCTGGGHHHHH
T ss_pred             CCC-----chhHHHH-HHHHHHHHHHHHHhcCCcEEEEEecCcccCchh---hhh-C--Ccc--chhccCCHHHHHHHHH
Confidence            111     1233222 23444544443   2239999999997654211   000 0  000  1113678899999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|..+++.++.
T Consensus       226 ~L~s~~~~~itG~~i~vdgG~  246 (252)
T 3f1l_A          226 WLMGDDSRRKTGMTFDAQPGR  246 (252)
T ss_dssp             HHHSGGGTTCCSCEEESSCC-
T ss_pred             HHcCccccCCCCCEEEeCCCc
Confidence            99875433 368889988875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.67  E-value=1.9e-15  Score=144.66  Aligned_cols=214  Identities=11%  Similarity=0.011  Sum_probs=140.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.++.+.+......     .....++.++.+|++|.+++.++++  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQ-----RFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----HSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----hcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765544332111     0011246789999999998887764  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++..    .+..+||++||...+.+.     ...
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~  156 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE-----PHM  156 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC-----TTB
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC-----CCc
Confidence                 6899999999764422           567888899999888754    445689999987632111     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-eE---Eec--------c--cccCCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-VV---VSA--------E--ASVDANDY  202 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i~---~~~--------~--~~~~~~~~  202 (427)
                           ..|+.+| .+.+.+.+.+    ...|+++..|+||++.......... ..   ...        .  ..+..  .
T Consensus       157 -----~~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r  228 (265)
T 3lf2_A          157 -----VATSAAR-AGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG--R  228 (265)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTC--S
T ss_pred             -----hhhHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcC--C
Confidence                 1222222 2234444433    3568999999999765421100000 00   000        0  01111  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+.+|||++++.++++... ..|..+++.++.
T Consensus       229 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          229 LGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             CcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence            67899999999999874333 368888988874

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.67  E-value=3.3e-16  Score=149.07  Aligned_cols=206  Identities=13%  Similarity=0.087  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||||+||+++++.|+++|++|++++|+.......  .           ..++.++.+|++|.+++.++++  
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~-----------~~~~~~~~~D~~~~~~v~~~~~~~   74 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVAD--L-----------GDRARFAAADVTDEAAVASALDLA   74 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHH--T-----------CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHh--c-----------CCceEEEECCCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999976432211  1           1345689999999999988876  


Q ss_pred             ----CcCEEEEccCCCCC---------------CCCccccHHHHHHHHHHHHHc------------CCCeEEEEeccccc
Q 044905           81 ----NAGKVVVTIGPTED---------------GPTSEVSTSDAFQVIQAAQLA------------GVGHVAIIYDGNTT  129 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~---------------~~~~~vn~~~~~~ll~Aa~~~------------gVk~~V~vSSs~v~  129 (427)
                          ++|++||++|....               ...+++|+.++.++++++...            +..+||++||...+
T Consensus        75 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  154 (257)
T 3tl3_A           75 ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF  154 (257)
T ss_dssp             HHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--
T ss_pred             HHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc
Confidence                89999999996421               115678999999999888753            34489999887632


Q ss_pred             ccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCc
Q 044905          130 AASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYK  203 (427)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~  203 (427)
                      .+          ......|+.+| .+.+.+.+.+    ...|+++..|+||++..........-...  ....+. ...+
T Consensus       155 ~~----------~~~~~~Y~asK-aa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~r~  222 (257)
T 3tl3_A          155 DG----------QIGQAAYSASK-GGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPH-PSRL  222 (257)
T ss_dssp             CC----------HHHHHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSS-SCSC
T ss_pred             CC----------CCCCccHHHHH-HHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCC-CCCc
Confidence            11          11112333333 2334444433    35689999999996654322110000000  001111 0137


Q ss_pred             ccHHHHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          204 VAKSQIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      .+.+|+|++++.++++ ....|..+++.++.
T Consensus       223 ~~p~dva~~v~~l~s~-~~itG~~i~vdGG~  252 (257)
T 3tl3_A          223 GNPDEYGALAVHIIEN-PMLNGEVIRLDGAI  252 (257)
T ss_dssp             BCHHHHHHHHHHHHHC-TTCCSCEEEESTTC
T ss_pred             cCHHHHHHHHHHHhcC-CCCCCCEEEECCCc
Confidence            8999999999999986 34578999998875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.67  E-value=2.9e-15  Score=144.78  Aligned_cols=214  Identities=14%  Similarity=0.099  Sum_probs=137.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc----------------chHHHHHHHHhhhhhhhhhhhccceEEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL----------------GAAQELARLAASYKILSKEELKRLNAVE   66 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~----------------~~~~~l~~~~~~~~~~~~~~~~rl~vv~   66 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.                +.+..+......       ...++.++.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~   82 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-------HNRRIVTAE   82 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-------TTCCEEEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-------cCCceEEEE
Confidence            457899999999999999999999999999999872                223332221111       124667899


Q ss_pred             ecCCCHHHHHHHhc-------CcCEEEEccCCCCCCC------------CccccHHHHHHHHHHHHHc----C-CCeEEE
Q 044905           67 SNFDSAESIAKAIG-------NAGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQAAQLA----G-VGHVAI  122 (427)
Q Consensus        67 gDl~D~~sl~~al~-------g~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~Aa~~~----g-Vk~~V~  122 (427)
                      +|++|.+++.++++       ++|++||++|......            .+++|+.++.++++++...    + ..+||+
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL  162 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            99999999888775       7999999999754321            4577888888888877542    3 468999


Q ss_pred             EecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc--c-e----EE
Q 044905          123 IYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY--N-V----VV  191 (427)
Q Consensus       123 vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~--~-i----~~  191 (427)
                      +||...+.+.     ....     .|+.+| .+.+.+.+.+    ...|+++..|+||++.........  . .    ..
T Consensus       163 isS~~~~~~~-----~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  231 (286)
T 3uve_A          163 TSSVGGLKAY-----PHTG-----HYVAAK-HGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLEN  231 (286)
T ss_dssp             ECCGGGTSCC-----TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSS
T ss_pred             ECchhhccCC-----CCcc-----HHHHHH-HHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccc
Confidence            9987632211     1111     222222 2234444433    357899999999965432211000  0 0    00


Q ss_pred             ecc--------cccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          192 SAE--------ASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       192 ~~~--------~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ...        .....+..+.+.+|||++++.++++... ..|..+++.++.
T Consensus       232 ~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          232 PGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS  283 (286)
T ss_dssp             CCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence            000        0000112478999999999999875433 368899998873

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.67  E-value=2e-16  Score=152.04  Aligned_cols=203  Identities=12%  Similarity=0.098  Sum_probs=136.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ...++|+||||+|+||+++++.|+++|++|++++|+.....                 .....+.+|++|.+++.++++ 
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------~~~~~~~~Dv~~~~~v~~~~~~   74 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------------NVSDHFKIDVTNEEEVKEAVEK   74 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------------TSSEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------------CceeEEEecCCCHHHHHHHHHH
Confidence            35678999999999999999999999999999999875421                 122478999999999888775 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||++|.....+           .+++|+.++.++++++..    .+..+||++||...+...     .+
T Consensus        75 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~  149 (269)
T 3vtz_A           75 TTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAAT-----KN  149 (269)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----TT
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----CC
Confidence                  7899999999765432           345788888888887643    567899999987743221     11


Q ss_pred             CCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCcc------------ce-EEecccccCCCCCc
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSY------------NV-VVSAEASVDANDYK  203 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~------------~i-~~~~~~~~~~~~~~  203 (427)
                      .     ..|+.+| .+.+.+.+.+.   ..++++..|+||++.........            .. .......+..  .+
T Consensus       150 ~-----~~Y~asK-aa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~  221 (269)
T 3vtz_A          150 A-----AAYVTSK-HALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMG--RI  221 (269)
T ss_dssp             C-----HHHHHHH-HHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTS--SC
T ss_pred             C-----hhHHHHH-HHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCC--CC
Confidence            1     1233222 23455554443   23899999999976542110000            00 0000011111  36


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+.+|||++++.++++... ..|.+|++.++.
T Consensus       222 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          222 GRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence            7999999999999875433 468999998874

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.66  E-value=2.7e-15  Score=143.98  Aligned_cols=213  Identities=15%  Similarity=0.109  Sum_probs=138.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +..++++||||+|+||+++++.|+++|++|+++.|+.. ..+.+......       ...++.++.+|++|.+++.++++
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~   88 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-------LGSDAIAIKADIRQVPEIVKLFD   88 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCcEEEEEcCCCCHHHHHHHHH
Confidence            34578999999999999999999999999999877654 33333222111       12456789999999999888775


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCC--eEEEEecccccccccCCCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVG--HVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk--~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                             ++|++||++|....++           .+++|+.++.++++++...-.+  +||++||......    ...+.
T Consensus        89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----~~~~~  164 (270)
T 3is3_A           89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----SVPKH  164 (270)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC----CCTTC
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC----CCCCC
Confidence                   6899999999765432           4678888999999998876443  8999988652110    00111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-c-------ceEEe------cccccCCCCC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-Y-------NVVVS------AEASVDANDY  202 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~-------~i~~~------~~~~~~~~~~  202 (427)
                           ..|+.+| .+.+.+.+.+.    ..|+++..|+||++........ .       .....      ....+..  .
T Consensus       165 -----~~Y~asK-aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r  236 (270)
T 3is3_A          165 -----SLYSGSK-GAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH--R  236 (270)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTC--S
T ss_pred             -----chhHHHH-HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCC--C
Confidence                 1233222 23444444433    5689999999996654221000 0       00000      0001111  3


Q ss_pred             cccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          203 KVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +.+.+|||++++.+++.... ..|..+++.++
T Consensus       237 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence            67899999999999874333 36888988776

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.66  E-value=1.5e-15  Score=145.41  Aligned_cols=217  Identities=13%  Similarity=0.145  Sum_probs=138.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+....+.+.....+.   . ....++.++.+|++|.+++.++++  
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~-~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDEL---E-DQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHH---H-TTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHH---H-hcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999988654322222211110   0 012356789999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           ++|++||++|.....+           .+++|+.++.++++++...  +..++|++||.+.+....     ... 
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-----~~~-  159 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG-----FYS-  159 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----CCC-
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----CCc-
Confidence                 6899999999765432           4568888999999998764  456899998876422211     111 


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-cc-c-eEEecccccCCCCCcccHHHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-SY-N-VVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~~-~-i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                          .|+.+| .+.+.+.+.+.    ..|+++..+.||++....... .. . ........+..  .+.+.+|||++++.
T Consensus       160 ----~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--r~~~pedvA~~v~~  232 (262)
T 3ksu_A          160 ----TYAGNK-APVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGN--QLTKIEDIAPIIKF  232 (262)
T ss_dssp             ----C------CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCC--CSCCGGGTHHHHHH
T ss_pred             ----hhHHHH-HHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCccc--CCCCHHHHHHHHHH
Confidence                222222 23444444443    468999999999665321100 00 0 00000011111  36789999999999


Q ss_pred             HhcCcccccCcEEEEecCCCC
Q 044905          216 VFSNTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       216 al~~~~~~~g~~~nI~~~~~~  236 (427)
                      ++++..-..|..+++-++...
T Consensus       233 L~s~~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          233 LTTDGWWINGQTIFANGGYTT  253 (262)
T ss_dssp             HHTTTTTCCSCEEEESTTCCC
T ss_pred             HcCCCCCccCCEEEECCCccC
Confidence            987522246889999888643

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.66  E-value=9.8e-16  Score=146.83  Aligned_cols=214  Identities=16%  Similarity=0.139  Sum_probs=139.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||+|+||++++++|+++|++|++++|+.+....+......     .....++..+.+|++|.+++.++++   
T Consensus        10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~g   84 (267)
T 3t4x_A           10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRA-----QYPDAILQPVVADLGTEQGCQDVIEKYP   84 (267)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----HCTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----hCCCceEEEEecCCCCHHHHHHHHHhcC
Confidence            46899999999999999999999999999999998765444322111     0001345688999999998888775   


Q ss_pred             CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCCccch
Q 044905           81 NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                      ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||...+.+.     .+.     
T Consensus        85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~-----  154 (267)
T 3t4x_A           85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS-----QEM-----  154 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----TTC-----
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----Ccc-----
Confidence            7899999999765432           3567778877776655    44667799999987632211     111     


Q ss_pred             hhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-------cceEEe----------cccccCCCCCcc
Q 044905          146 NLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-------YNVVVS----------AEASVDANDYKV  204 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-------~~i~~~----------~~~~~~~~~~~i  204 (427)
                      ..|+.+| .+.+.+.+.+.    ..|+++..+.||.+........       ......          .+..+..  .+.
T Consensus       155 ~~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~  231 (267)
T 3t4x_A          155 AHYSATK-TMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQ--RLI  231 (267)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSC--SCB
T ss_pred             hHHHHHH-HHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCccccc--Ccc
Confidence            2233322 23444444443    4579999999996643210000       000000          0001111  378


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDPS  235 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~~  235 (427)
                      +.+|||++++.+++.... ..|..+++.++..
T Consensus       232 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          232 RPEEIAHLVTFLSSPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             CTHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             CHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence            999999999998874333 3689999988853

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.66  E-value=1.8e-15  Score=145.29  Aligned_cols=210  Identities=14%  Similarity=0.139  Sum_probs=135.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec-CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP-ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R-~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .++++||||+|+||+++++.|+++|++|+++.+ +....+.+......       ...++.++.+|++|.+++.++++  
T Consensus        27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~v~~~~~~~   99 (267)
T 3u5t_A           27 NKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-------AGGKALTAQADVSDPAAVRRLFATA   99 (267)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-------cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            467999999999999999999999999998855 44444444322111       12356689999999999888775  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           ++|++||++|.....+           .+++|+.++.++++++...  ...+||++||.......     .+.. 
T Consensus       100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~~-  173 (267)
T 3u5t_A          100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH-----PSYG-  173 (267)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-----TTCH-
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-----CCch-
Confidence                 7899999999765432           4458889999999888664  23589999887632211     1111 


Q ss_pred             cchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCC-ccceEEe--cccccCCCCCcccHHHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPES-SYNVVVS--AEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~-~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                          .|+.+| .+.+.+.+.+.    ..|+++..|.||++....... ...-...  ....+..  .+.+.+|||++++.
T Consensus       174 ----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA~~v~~  246 (267)
T 3u5t_A          174 ----IYAAAK-AGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLE--RLGTPQDIAGAVAF  246 (267)
T ss_dssp             ----HHHHHH-HHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTC--SCBCHHHHHHHHHH
T ss_pred             ----HHHHHH-HHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCC--CCcCHHHHHHHHHH
Confidence                233222 23444544443    468999999999665422100 0000000  0111111  36789999999999


Q ss_pred             HhcCccc-ccCcEEEEecC
Q 044905          216 VFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~  233 (427)
                      +++.... ..|..+++.++
T Consensus       247 L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          247 LAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             HHSTTTTTCCSEEEEESSS
T ss_pred             HhCccccCccCCEEEeCCC
Confidence            9875433 36788888776

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.66  E-value=5.2e-16  Score=147.44  Aligned_cols=195  Identities=12%  Similarity=0.089  Sum_probs=136.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++|+||||+|+||++|++.|+++|++|++++|+......                   ..+.+|++|.+++.++++  
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-------------------~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-------------------HSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-------------------EEEECSCSSHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-------------------cceEEEeCCHHHHHHHHHHH
Confidence            45689999999999999999999999999999999864321                   257889999998888775  


Q ss_pred             -----CcCEEEEccCCCCCCC------------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|+|||++|......            .+++|+.++.++++++...-  -.+||++||.+.+.+.        +
T Consensus        82 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------~  153 (251)
T 3orf_A           82 NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT--------S  153 (251)
T ss_dssp             HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------T
T ss_pred             HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC--------C
Confidence                 4699999999643211            45688999999999987643  2489999887632211        1


Q ss_pred             ccchhhhhccccccHHHHHHHHh-c-----CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI-E-----TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~-~-----~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .  ...|+.+| .+.+.+.+.+. +     .|+++..|+||++.....   ... .  ......  .+++.+|+|++++.
T Consensus       154 ~--~~~Y~~sK-aa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~---~~~-~--~~~~~~--~~~~~~dva~~i~~  222 (251)
T 3orf_A          154 G--MIAYGATK-AATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN---RKY-M--SDANFD--DWTPLSEVAEKLFE  222 (251)
T ss_dssp             T--BHHHHHHH-HHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH---HHH-C--TTSCGG--GSBCHHHHHHHHHH
T ss_pred             C--CchhHHHH-HHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch---hhh-c--cccccc--ccCCHHHHHHHHHH
Confidence            1  12333332 34566666555 3     579999999997654211   000 0  111111  47899999999999


Q ss_pred             HhcC-cc-cccCcEEEEecCCC
Q 044905          216 VFSN-TA-VAENKVVKVFTDPS  235 (427)
Q Consensus       216 al~~-~~-~~~g~~~nI~~~~~  235 (427)
                      ++.+ .. ...|..+++.++..
T Consensus       223 l~~~~~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          223 WSTNSDSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             HHHCGGGCCCTTCEEEEEEETT
T ss_pred             HhcCccccCCcceEEEEecCCc
Confidence            9986 22 24688999987753

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.66  E-value=2.3e-16  Score=151.55  Aligned_cols=201  Identities=15%  Similarity=0.128  Sum_probs=135.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||+|+||+++++.|+++|++|++++|+.......                  ..+.+|++|.+++..+++  
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~------------------~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------------LHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS------------------EECCCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh------------------hccCcCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999987543211                  145789999888776654  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|....++           .+++|+.++.++++++    ++.+..+||++||...+.+.     .+.
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~~~  163 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----PGH  163 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----TTB
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----CCC
Confidence                 7899999999765422           4568888999998887    55677899999987632211     111


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc---cceE------EecccccCCCCCcccHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS---YNVV------VSAEASVDANDYKVAKS  207 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~---~~i~------~~~~~~~~~~~~~i~v~  207 (427)
                           ..|+.+| .+.+.+.+.+    ...|+++..|+||++........   ....      ......+..  .+.+.+
T Consensus       164 -----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pe  235 (266)
T 3uxy_A          164 -----ALYCLTK-AALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLG--RIAEPE  235 (266)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTS--SCBCHH
T ss_pred             -----hHHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCC--CCcCHH
Confidence                 2233332 2344444443    35689999999997654211000   0000      000111111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.++++... ..|..|++.++.
T Consensus       236 dvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          236 DIADVVLFLASDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHhCchhcCCcCCEEEECcCE
Confidence            999999999875433 368999998875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.66  E-value=4.5e-15  Score=144.69  Aligned_cols=214  Identities=14%  Similarity=0.095  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc------------chHHHHHHHHhhhhhhhhhhhccceEEEecCC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL------------GAAQELARLAASYKILSKEELKRLNAVESNFD   70 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~------------~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~   70 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.            ..+..+......       ...++.++.+|++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~   99 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-------LGRRIIASQVDVR   99 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-------cCCceEEEECCCC
Confidence            457899999999999999999999999999999872            222222211111       1245678999999


Q ss_pred             CHHHHHHHhc-------CcCEEEEccCCCCCCC------------CccccHHHHHHHHHHHHHc-----CCCeEEEEecc
Q 044905           71 SAESIAKAIG-------NAGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQAAQLA-----GVGHVAIIYDG  126 (427)
Q Consensus        71 D~~sl~~al~-------g~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~Aa~~~-----gVk~~V~vSSs  126 (427)
                      |.+++.++++       ++|++||++|......            .+++|+.++.++++++...     +..+||++||.
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~  179 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSI  179 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECCh
Confidence            9999888775       7999999999654321            5678888888888876543     35789999987


Q ss_pred             cccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc--ceEEe---cc---
Q 044905          127 NTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY--NVVVS---AE---  194 (427)
Q Consensus       127 ~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~--~i~~~---~~---  194 (427)
                      +.+.+.     ....     .|+.+| .+.+.+.+.+    ...|+++..|+||++.........  .....   ..   
T Consensus       180 ~~~~~~-----~~~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  248 (299)
T 3t7c_A          180 GGLRGA-----ENIG-----NYIASK-HGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVE  248 (299)
T ss_dssp             GGTSCC-----TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHH
T ss_pred             hhccCC-----CCcc-----hHHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhh
Confidence            632211     1111     232222 2234444433    356899999999966542211000  00000   00   


Q ss_pred             -------cccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          195 -------ASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       195 -------~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                             .....+..+.+.+|||++++.++++... ..|..+++.++.
T Consensus       249 ~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  296 (299)
T 3t7c_A          249 DFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA  296 (299)
T ss_dssp             HHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence                   0000112477999999999999875433 368899998873

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.66  E-value=4.4e-15  Score=144.66  Aligned_cols=211  Identities=11%  Similarity=0.080  Sum_probs=139.4

Q ss_pred             CCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++++||||+|  +||++|++.|+++|++|++++|+....+.+......        ..++.++.+|++|.+++.++++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES--------LGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------HTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--------cCCeEEEEcCCCCHHHHHHHHH
Confidence            456899999997  999999999999999999999997644433322111        2334689999999999888775


Q ss_pred             -------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCC
Q 044905           81 -------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~  136 (427)
                             ++|++||++|....    .+           .+++|+.++.++++++...-  ..+||++||.+.+.+.    
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~----  176 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV----  176 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC----
Confidence                   68999999997642    11           55678889999999887653  3489999887632211    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKSQ  208 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~D  208 (427)
                       ....     .|+.+| .+.+.+.+.+    ...|+++..|+||++...........  ...  ....+..  .+.+.+|
T Consensus       177 -~~~~-----~Y~asK-aal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~ped  247 (296)
T 3k31_A          177 -PHYN-----VMGVCK-AALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLR--RNTTLDD  247 (296)
T ss_dssp             -TTTT-----HHHHHH-HHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTS--SCCCHHH
T ss_pred             -CCch-----hhHHHH-HHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCC--CCCCHHH
Confidence             1112     222222 2234444333    35689999999997654322111000  000  0011111  3678999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ||++++.+++.... ..|.++++.++.
T Consensus       248 vA~~v~fL~s~~a~~itG~~i~vdGG~  274 (296)
T 3k31_A          248 VGGAALYLLSDLGRGTTGETVHVDCGY  274 (296)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHcCCccCCccCCEEEECCCc
Confidence            99999999875322 468899998885

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.66  E-value=1.6e-15  Score=145.02  Aligned_cols=210  Identities=13%  Similarity=0.109  Sum_probs=135.9

Q ss_pred             CCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .++|+||||+  |+||+++++.|+++|++|++++|+......+......        ..+..++.+|++|.+++.++++ 
T Consensus         9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--------~~~~~~~~~D~~~~~~v~~~~~~   80 (265)
T 1qsg_A            9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--------LGSDIVLQCDVAEDASIDTMFAE   80 (265)
T ss_dssp             TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh--------cCCcEEEEccCCCHHHHHHHHHH
Confidence            4689999999  9999999999999999999999987211111111110        1123589999999999888775 


Q ss_pred             ------CcCEEEEccCCCCC----CC------------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCC
Q 044905           81 ------NAGKVVVTIGPTED----GP------------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~----~~------------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~  136 (427)
                            ++|+|||++|....    .+            .+++|+.++.++++++...-  -.+||++||.+.+...    
T Consensus        81 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----  156 (265)
T 1qsg_A           81 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----  156 (265)
T ss_dssp             HHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----
T ss_pred             HHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC----
Confidence                  68999999997541    11            45678889999999987652  2489999986632211    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKSQ  208 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~D  208 (427)
                       .+..     .|+.++ .+.+.+.+.+.    ..|++++.|+||++...........  ...  ....+..  .+.+.+|
T Consensus       157 -~~~~-----~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~d  227 (265)
T 1qsg_A          157 -PNYN-----VMGLAK-ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR--RTVTIED  227 (265)
T ss_dssp             -TTTT-----HHHHHH-HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--SCCCHHH
T ss_pred             -CCch-----HHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCC--CCCCHHH
Confidence             1111     233222 23455544433    4689999999996654221110000  000  0001111  3679999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +|++++.++++... ..|..|++.++.
T Consensus       228 va~~v~~l~s~~~~~~tG~~~~vdgG~  254 (265)
T 1qsg_A          228 VGNSAAFLCSDLSAGISGEVVHVDGGF  254 (265)
T ss_dssp             HHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHhCchhcCccCCEEEECCCc
Confidence            99999999875332 357889998874

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.66  E-value=2.5e-15  Score=145.52  Aligned_cols=207  Identities=10%  Similarity=0.070  Sum_probs=136.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-------HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-------AQELARLAASYKILSKEELKRLNAVESNFDSAES   74 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-------~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s   74 (427)
                      +..++++||||+|+||++++++|+++|++|++++|+..+       +..+......       ...++.++.+|++|.++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~   79 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-------AGGQALPIVGDIRDGDA   79 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-------HTSEEEEEECCTTSHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-------cCCcEEEEECCCCCHHH
Confidence            345789999999999999999999999999999999763       2222211111       12356789999999999


Q ss_pred             HHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----CCCeEEEEecccccccc
Q 044905           75 IAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        75 l~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v~~~~  132 (427)
                      +.++++       ++|++||++|.....+           .+++|+.++.++++++...    +..+||++||.......
T Consensus        80 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           80 VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC
Confidence            888775       7999999999765432           4558889999999988654    56799999887632111


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCC-CCCCCCCCCccceEEecccccCCCCCcccHH
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTS-LTEDFSPESSYNVVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~  207 (427)
                          ..+.     ..|+.+| .+.+.+.+.+.    ..|+++..|.|| ++.....   ... . .......  .+.+.+
T Consensus       160 ----~~~~-----~~Y~asK-aal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~---~~~-~-~~~~~~~--r~~~pe  222 (285)
T 3sc4_A          160 ----WLRP-----TPYMMAK-YGMTLCALGIAEELRDAGIASNTLWPRTTVATAAV---QNL-L-GGDEAMA--RSRKPE  222 (285)
T ss_dssp             ----GSCS-----HHHHHHH-HHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHH---HHH-H-TSCCCCT--TCBCTH
T ss_pred             ----CCCC-----chHHHHH-HHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHH---Hhh-c-ccccccc--CCCCHH
Confidence                0111     2233222 23444444433    578999999999 5543211   000 0 0111111  367899


Q ss_pred             HHHHHHHHHhcCcccccCcEEEEec
Q 044905          208 QIASLVADVFSNTAVAENKVVKVFT  232 (427)
Q Consensus       208 DVA~~v~~al~~~~~~~g~~~nI~~  232 (427)
                      |+|++++.+++++....|..+.+.+
T Consensus       223 dvA~~~~~l~s~~~~~tG~~i~~dg  247 (285)
T 3sc4_A          223 VYADAAYVVLNKPSSYTGNTLLCED  247 (285)
T ss_dssp             HHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred             HHHHHHHHHhCCcccccceEEEEcC
Confidence            9999999999865433556654433

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.66  E-value=2.7e-15  Score=147.67  Aligned_cols=214  Identities=14%  Similarity=0.134  Sum_probs=137.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc------------chHHHHHHHHhhhhhhhhhhhccceEEEecCC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL------------GAAQELARLAASYKILSKEELKRLNAVESNFD   70 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~------------~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~   70 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.            ..+..+......       ...++.++.+|++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~  117 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-------QGRRIIARQADVR  117 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-------TTCCEEEEECCTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh-------cCCeEEEEECCCC
Confidence            456899999999999999999999999999998862            222222111110       1245678999999


Q ss_pred             CHHHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cC-CCeEEEEeccc
Q 044905           71 SAESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AG-VGHVAIIYDGN  127 (427)
Q Consensus        71 D~~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~g-Vk~~V~vSSs~  127 (427)
                      |.+++.++++       ++|++||++|....++           .+++|+.++.++++++..    .+ -.+||++||..
T Consensus       118 d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          118 DLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            9999888775       7899999999765422           457888888888887743    33 45799998876


Q ss_pred             ccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCC----------CccceEE--
Q 044905          128 TTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPE----------SSYNVVV--  191 (427)
Q Consensus       128 v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~----------~~~~i~~--  191 (427)
                      .+.+.     .+.     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++......          .......  
T Consensus       198 ~~~~~-----~~~-----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  266 (317)
T 3oec_A          198 GLRGA-----PGQ-----SHYAASK-HGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRED  266 (317)
T ss_dssp             GSSCC-----TTB-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHH
T ss_pred             hcCCC-----CCC-----cchHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhH
Confidence            32211     111     1233222 23444444433    56899999999966431100          0000000  


Q ss_pred             -ec--ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          192 -SA--EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       192 -~~--~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                       ..  ......+..+++.+|||++++.+++.... ..|.+|++.++.
T Consensus       267 ~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~  313 (317)
T 3oec_A          267 AAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ  313 (317)
T ss_dssp             HHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence             00  00011112578999999999998875433 368899998874

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.66  E-value=4.1e-15  Score=143.91  Aligned_cols=201  Identities=16%  Similarity=0.111  Sum_probs=127.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|++++|+.+..+.+......      .....+.++.+|++|.+++.++++  
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dv~d~~~v~~~~~~~  105 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG------RTGNIVRAVVCDVGDPDQVAALFAAV  105 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh------cCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999998765544332111      001223689999999998887775  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----cC--CCeEEEEecccccccccCCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----AG--VGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~g--Vk~~V~vSSs~v~~~~~~~~~  137 (427)
                           .+|++||++|.... .+           .+++|+.++.++++++..    .+  ..+||++||.+...+     .
T Consensus       106 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~-----~  180 (281)
T 4dry_A          106 RAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP-----R  180 (281)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-----C
T ss_pred             HHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-----C
Confidence                 67999999997533 11           456777887777776643    33  468999988763211     1


Q ss_pred             CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .+..     .|+.+| .+.+.+.+.+    ...|+++..|+||++..........-....... .....+++.+|||+++
T Consensus       181 ~~~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~v  253 (281)
T 4dry_A          181 PNSA-----PYTATK-HAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGE-VAAEPTIPIEHIAEAV  253 (281)
T ss_dssp             TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSC-EEECCCBCHHHHHHHH
T ss_pred             CCCh-----hHHHHH-HHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhc-ccccCCCCHHHHHHHH
Confidence            1111     233222 2244444433    357899999999966542221111111110000 0111377999999999


Q ss_pred             HHHhcCcc
Q 044905          214 ADVFSNTA  221 (427)
Q Consensus       214 ~~al~~~~  221 (427)
                      +.+++++.
T Consensus       254 ~fL~s~~~  261 (281)
T 4dry_A          254 VYMASLPL  261 (281)
T ss_dssp             HHHHHSCT
T ss_pred             HHHhCCCc
Confidence            99998764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.65  E-value=1.2e-15  Score=145.66  Aligned_cols=214  Identities=14%  Similarity=0.089  Sum_probs=138.2

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ...++|+||||+  |+||+++++.|+++|++|++++|+....+.+......        ..++.++.+|++|.+++.+++
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAE--------FGSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHH
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHH--------cCCcEEEECCCCCHHHHHHHH
Confidence            356799999999  9999999999999999999999986543333322111        234568999999999988887


Q ss_pred             c-------CcCEEEEccCCCCC----CC------------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccC
Q 044905           80 G-------NAGKVVVTIGPTED----GP------------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~------------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~  134 (427)
                      +       ++|++||++|....    ++            .+++|+.++.++++++...-  ..+||++||.+.+.+   
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---  160 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA---  160 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC---
Confidence            5       67999999997542    11            44677778888888886542  347999988763221   


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccH
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAK  206 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v  206 (427)
                        ..+..     .|+.++ .+.+.+.+.+    ...|+++..++||++...........  ...  ....+..  .+.+.
T Consensus       161 --~~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~p  230 (271)
T 3ek2_A          161 --IPNYN-----TMGLAK-AALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLK--RNVTI  230 (271)
T ss_dssp             --CTTTT-----HHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTS--SCCCH
T ss_pred             --CCCcc-----chhHHH-HHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcC--CCCCH
Confidence              11112     222222 2234444333    35689999999997654221110000  000  0011111  36799


Q ss_pred             HHHHHHHHHHhcCcc-cccCcEEEEecCCCC
Q 044905          207 SQIASLVADVFSNTA-VAENKVVKVFTDPSA  236 (427)
Q Consensus       207 ~DVA~~v~~al~~~~-~~~g~~~nI~~~~~~  236 (427)
                      +|+|++++.++++.. ...|..|++.++...
T Consensus       231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSEEEEESTTGGG
T ss_pred             HHHHHHHHHHcCcccCCeeeeEEEECCCeee
Confidence            999999999987532 246899999988633

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.65  E-value=3.5e-15  Score=142.43  Aligned_cols=214  Identities=11%  Similarity=0.109  Sum_probs=139.5

Q ss_pred             CCCCEEEEEcCCcH--HHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQ--AGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~--iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++++||||+|+  ||+++++.|+++|++|+++.|+....+.+......+      ...++.++.+|++|.+++.+++
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL------DRNDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS------SSCCCEEEECCCSSSHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc------CCCCceEEeCCCCCHHHHHHHH
Confidence            34578999999988  999999999999999999999865444333322110      1125779999999998888776


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~  135 (427)
                      +       .+|++||++|....    .+           .+++|+.++.++++++...-  -.+||++||.+.+.+.   
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---  155 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM---  155 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC---
Confidence            5       68999999997641    11           45677778888898887653  2489999987632111   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~  207 (427)
                        ....     .|+.++ .+.+.+.+.+    ...|+++..|+||++...........  ...  ....+..  .+.+.+
T Consensus       156 --~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~  225 (266)
T 3oig_A          156 --PNYN-----VMGVAK-ASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLR--RTTTPE  225 (266)
T ss_dssp             --TTTH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS--SCCCHH
T ss_pred             --CCcc-----hhHHHH-HHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCC--CCCCHH
Confidence              1111     233222 2234444433    35689999999996654211110000  000  0001111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |+|++++.+++.... ..|..+++.++.
T Consensus       226 dva~~v~~l~s~~~~~~tG~~i~vdGG~  253 (266)
T 3oig_A          226 EVGDTAAFLFSDMSRGITGENLHVDSGF  253 (266)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHcCCchhcCcCCEEEECCCe
Confidence            999999999875332 468899998875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.65  E-value=4.9e-16  Score=149.95  Aligned_cols=212  Identities=12%  Similarity=0.072  Sum_probs=140.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++..+++ 
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~~~~~~~~  103 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA-------SGGTAQELAGDLSEAGAGTDLIER  103 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH-------TTCCEEEEECCTTSTTHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-------cCCeEEEEEecCCCHHHHHHHHHH
Confidence            3457899999999999999999999999999999998766554332211       12456789999999888887775 


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||...+.        +.
T Consensus       104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~--------~~  175 (275)
T 4imr_A          104 AEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLR--------PK  175 (275)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS--------CC
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCC--------CC
Confidence                 7899999999755422           4567888888888877    445677999999876321        11


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc---eEEe---cccccCCCCCcccHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN---VVVS---AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~---i~~~---~~~~~~~~~~~i~v~DVA  210 (427)
                      +..  ..|+.+| .+.+.+.+.+    ...|+++..|+||++..........   -...   ....+..  .+.+.+|||
T Consensus       176 ~~~--~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA  250 (275)
T 4imr_A          176 SVV--TAYAATK-AAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMG--RAGRPEEMV  250 (275)
T ss_dssp             TTB--HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTC--SCBCGGGGH
T ss_pred             CCc--hhhHHHH-HHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccC--CCcCHHHHH
Confidence            111  1233222 2234444433    3568999999999775421100000   0000   0000111  266899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++++.++++... ..|..+++.++
T Consensus       251 ~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          251 GAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             HHHHHHcCcccCCCCCCEEEeCCC
Confidence            999999875433 36888888765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.65  E-value=2.7e-15  Score=144.24  Aligned_cols=212  Identities=9%  Similarity=0.058  Sum_probs=136.9

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++|+||||+  |+||+++++.|+++|++|++++|+......+......        ..++.++.+|++|.+++.+++
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--------~~~~~~~~~D~~~~~~v~~~~   75 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE--------LNSPYVYELDVSKEEHFKSLY   75 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------cCCcEEEEcCCCCHHHHHHHH
Confidence            445789999999  9999999999999999999999987521112111110        123468999999999988877


Q ss_pred             c-------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~  135 (427)
                      +       ++|++||++|....    .+           .+++|+.++.++++++...-  -.+||++||.+...+.   
T Consensus        76 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---  152 (275)
T 2pd4_A           76 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---  152 (275)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---
T ss_pred             HHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC---
Confidence            5       68999999997542    11           45678889999999987651  2589999986532110   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEec--ccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVSA--EASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~~--~~~~~~~~~~i~v~  207 (427)
                        .+.     ..|+.++ .+.+.+.+.+    ...|++++.|+||++...........  ....  ...+..  .+.+.+
T Consensus       153 --~~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--~~~~p~  222 (275)
T 2pd4_A          153 --AHY-----NVMGLAK-AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR--KNVSLE  222 (275)
T ss_dssp             --TTC-----HHHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--SCCCHH
T ss_pred             --CCc-----hhhHHHH-HHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcC--CCCCHH
Confidence              111     1233222 2344444433    35699999999996654221110000  0000  001111  267899


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |+|++++.++..... ..|..+++.++.
T Consensus       223 dva~~~~~l~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          223 EVGNAGMYLLSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999998874322 367888888774

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.65  E-value=9e-16  Score=147.88  Aligned_cols=210  Identities=15%  Similarity=0.108  Sum_probs=137.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||+|+||+++++.|+++|++|++++|+.++...+....          ..++.++.+|++|.+++.++++   
T Consensus        30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~   99 (281)
T 3ppi_A           30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----------GNRAEFVSTNVTSEDSVLAAIEAAN   99 (281)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            457999999999999999999999999999999987665553321          1345689999999999988875   


Q ss_pred             ---CcCEEEEc-cCCCCCCC----------------CccccHHHHHHHHHHHHHc----------CCCeEEEEecccccc
Q 044905           81 ---NAGKVVVT-IGPTEDGP----------------TSEVSTSDAFQVIQAAQLA----------GVGHVAIIYDGNTTA  130 (427)
Q Consensus        81 ---g~d~Vi~~-ag~~~~~~----------------~~~vn~~~~~~ll~Aa~~~----------gVk~~V~vSSs~v~~  130 (427)
                         +.|++||+ ++......                .+++|+.++.++++++...          +-.+||++||...+.
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  179 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE  179 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred             HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence               57999999 44332111                3456777888888877532          345899998876322


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcc
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKV  204 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i  204 (427)
                      +.     .+..     .|+.+| .+.+.+.+.    +...|+++..|+||++..........-...  ....+. ...+.
T Consensus       180 ~~-----~~~~-----~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~~  247 (281)
T 3ppi_A          180 GQ-----IGQT-----AYAAAK-AGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPF-PKRLG  247 (281)
T ss_dssp             CC-----TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCS-SSSCB
T ss_pred             CC-----CCCc-----ccHHHH-HHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCC-CCCCC
Confidence            11     1111     233222 223333333    335689999999996653211000000000  000111 01478


Q ss_pred             cHHHHHHHHHHHhcCcccccCcEEEEecCCCC
Q 044905          205 AKSQIASLVADVFSNTAVAENKVVKVFTDPSA  236 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~  236 (427)
                      +.+|+|++++.++++. ...|..+++.++...
T Consensus       248 ~pedvA~~v~~l~s~~-~~tG~~i~vdGG~~~  278 (281)
T 3ppi_A          248 TPDEFADAAAFLLTNG-YINGEVMRLDGAQRF  278 (281)
T ss_dssp             CHHHHHHHHHHHHHCS-SCCSCEEEESTTCCC
T ss_pred             CHHHHHHHHHHHHcCC-CcCCcEEEECCCccc
Confidence            9999999999999853 457899999888643

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.65  E-value=5.1e-15  Score=144.05  Aligned_cols=211  Identities=11%  Similarity=0.074  Sum_probs=137.9

Q ss_pred             CCCEEEEEcCCcH--HHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQ--AGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~--iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++++||||+|+  ||+++++.|+++|++|+++.|+....+.+......        ..++.++.+|++|.+++.++++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEE--------LGAFVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHH--------HTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--------cCCceEEECCCCCHHHHHHHHH
Confidence            4568999999988  99999999999999999999985433333222111        2345689999999999888775


Q ss_pred             -------CcCEEEEccCCCC----CCC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCC
Q 044905           81 -------NAGKVVVTIGPTE----DGP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~----~~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~  136 (427)
                             ++|++||++|...    ..+           .+++|+.++.++++++...-  ..+||++||.+.+.+.    
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----  177 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM----  177 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC----
T ss_pred             HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC----
Confidence                   6899999999764    111           56788889999999887643  3589999987632211    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKSQ  208 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~D  208 (427)
                       ....     .|+.+| .+.+.+.+.+    ...|+++..|+||++...........  ...  ....+..  .+.+.+|
T Consensus       178 -~~~~-----~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~ped  248 (293)
T 3grk_A          178 -PNYN-----VMGVAK-AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLR--RTVTIDE  248 (293)
T ss_dssp             -TTTT-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTS--SCCCHHH
T ss_pred             -CchH-----HHHHHH-HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCC--CCCCHHH
Confidence             1112     222222 2234444333    35689999999997654221100000  000  0011111  3678999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ||++++.+++.... ..|..+++.++.
T Consensus       249 vA~~v~~L~s~~~~~itG~~i~vdGG~  275 (293)
T 3grk_A          249 VGDVGLYFLSDLSRSVTGEVHHADSGY  275 (293)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHcCccccCCcceEEEECCCc
Confidence            99999998875332 468899998875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.64  E-value=8.9e-16  Score=149.13  Aligned_cols=216  Identities=15%  Similarity=0.153  Sum_probs=141.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ..++++||||+|+||+++++.|+++|+   .|+++.|+.+.++.+......     .....++.++.+|++|.+++.+++
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ-----EFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH-----HCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHh-----hCCCCeEEEEECCCCCHHHHHHHH
Confidence            457899999999999999999999997   999999998766555432111     000235668999999999998887


Q ss_pred             c-------CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           80 G-------NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                      +       ++|++||++|... ..+           .+++|+.++.++++++    ++.+..+||++||.....+.    
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~----  182 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY----  182 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC----
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC----
Confidence            6       5899999999654 211           4678888999888887    45677899999987632111    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                       .+.     ..|+.+| .+.+.+.+.+.    ..|+++..|+||++..........-.............+++.+|||++
T Consensus       183 -~~~-----~~Y~asK-aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~  255 (287)
T 3rku_A          183 -PTG-----SIYCASK-FAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADL  255 (287)
T ss_dssp             -TTC-----HHHHHHH-HHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHH
T ss_pred             -CCC-----chHHHHH-HHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHH
Confidence             111     1233222 23444444443    468999999999765421000000000000000111135589999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.+++.... ..+.++.+.+++
T Consensus       256 v~~l~s~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          256 IVYATSRKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             HHHHHTSCTTEEEEEEEEEETTE
T ss_pred             HHHHhCCCCCeEecceEEeeCCC
Confidence            9999986533 357778887765

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.64  E-value=3.1e-15  Score=141.51  Aligned_cols=212  Identities=14%  Similarity=0.077  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+||||+|+||+++++.|+++|++|+++ .|+......+......       ...++.++.+|++|.+++..+++.
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   78 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-------NGGSAFSIGANLESLHGVEALYSS   78 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-------cCCceEEEecCcCCHHHHHHHHHH
Confidence            45789999999999999999999999999986 4555544433222111       123556889999999888777642


Q ss_pred             -------------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           82 -------------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        82 -------------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                                   +|++||++|.....+           .+++|+.++.++++++...  +..+||++||.+.+.+.   
T Consensus        79 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~---  155 (255)
T 3icc_A           79 LDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL---  155 (255)
T ss_dssp             HHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC---
T ss_pred             HHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC---
Confidence                         899999999765422           3567888999999988654  34589999887632211   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCcc-ce---EEecccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSY-NV---VVSAEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~-~i---~~~~~~~~~~~~~~i~v~  207 (427)
                        ...     ..|+.+| .+.+.+.+.+    ...|+++..++||++......... ..   .......+..  .+.+.+
T Consensus       156 --~~~-----~~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  225 (255)
T 3icc_A          156 --PDF-----IAYSMTK-GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFN--RLGEVE  225 (255)
T ss_dssp             --TTB-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTS--SCBCHH
T ss_pred             --CCc-----chhHHhH-HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcC--CCCCHH
Confidence              111     1233222 2234444333    356899999999966543221110 00   0000011111  367899


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |+|++++.++..... ..|+.+++.++.
T Consensus       226 dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          226 DIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             HHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            999999998864322 468999998874

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.64  E-value=2e-15  Score=145.95  Aligned_cols=192  Identities=15%  Similarity=0.125  Sum_probs=127.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+.++...+......      ....++.++.+|++|.+++.++++  
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dl~d~~~v~~~~~~~  100 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE------LGAASAHYIAGTMEDMTFAEQFVAQA  100 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH------hCCCceEEEeCCCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998765544322111      011256789999999988887765  


Q ss_pred             -----CcCEEEEc-cCCCCCCC----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 -----NAGKVVVT-IGPTEDGP----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 -----g~d~Vi~~-ag~~~~~~----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                           ++|+|||+ +|......          .+++|+.++.++++++...   +.++||++||.+.+.+.     .+. 
T Consensus       101 ~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~-  174 (286)
T 1xu9_A          101 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY-----PMV-  174 (286)
T ss_dssp             HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-----TTC-
T ss_pred             HHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC-----CCc-
Confidence                 79999999 56543211          4567888888888877542   34799999987632111     111 


Q ss_pred             ccchhhhhccccccHHHHHHHH------hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKV------IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l------~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                          ..|+.++ .+.+.+.+.+      ...++++++++||++.....   ... ..+  .  .....++.+|+|+.++.
T Consensus       175 ----~~Y~asK-~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~---~~~-~~~--~--~~~~~~~~~~vA~~i~~  241 (286)
T 1xu9_A          175 ----AAYSASK-FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA---MKA-VSG--I--VHMQAAPKEECALEIIK  241 (286)
T ss_dssp             ----HHHHHHH-HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH---HHH-SCG--G--GGGGCBCHHHHHHHHHH
T ss_pred             ----cHHHHHH-HHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH---HHh-ccc--c--ccCCCCCHHHHHHHHHH
Confidence                1233222 2234443332      24689999999997654211   000 001  0  11247899999999999


Q ss_pred             HhcC
Q 044905          216 VFSN  219 (427)
Q Consensus       216 al~~  219 (427)
                      ++..
T Consensus       242 ~~~~  245 (286)
T 1xu9_A          242 GGAL  245 (286)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            8864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.64  E-value=6.5e-15  Score=142.56  Aligned_cols=212  Identities=15%  Similarity=0.101  Sum_probs=135.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCC----HHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDS----AESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D----~~sl~   76 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+. +....+.....      .....++.++.+|++|    .+++.
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~------~~~~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELN------KERSNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHH------HHSTTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH------hhcCCceEEEEeecCCccCCHHHHH
Confidence            4557899999999999999999999999999999998 65544432211      0012356689999999    88888


Q ss_pred             HHhc-------CcCEEEEccCCCCCCC---------------------CccccHHHHHHHHHHHHHc----C------CC
Q 044905           77 KAIG-------NAGKVVVTIGPTEDGP---------------------TSEVSTSDAFQVIQAAQLA----G------VG  118 (427)
Q Consensus        77 ~al~-------g~d~Vi~~ag~~~~~~---------------------~~~vn~~~~~~ll~Aa~~~----g------Vk  118 (427)
                      ++++       ++|+|||++|.....+                     .+++|+.++.++++++...    +      ..
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g  174 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNL  174 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCe
Confidence            7765       7899999999654222                     2346677788888777543    2      45


Q ss_pred             eEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe-c
Q 044905          119 HVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS-A  193 (427)
Q Consensus       119 ~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~-~  193 (427)
                      +||++||.+.+...     .+.     ..|+.+| .+.+.+.+.+    ...|+++..|+||++..... ........ .
T Consensus       175 ~iv~isS~~~~~~~-----~~~-----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~-~~~~~~~~~~  242 (288)
T 2x9g_A          175 SIVNLCDAMVDQPC-----MAF-----SLYNMGK-HALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA-MGEEEKDKWR  242 (288)
T ss_dssp             EEEEECCTTTTSCC-----TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCTT-SCHHHHHHHH
T ss_pred             EEEEEecccccCCC-----CCC-----chHHHHH-HHHHHHHHHHHHHhhccCeEEEEEEeccccCccc-cChHHHHHHH
Confidence            89999887632211     111     1233222 2233444333    35689999999996544221 10000000 0


Q ss_pred             ccccCCCCCc-ccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          194 EASVDANDYK-VAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       194 ~~~~~~~~~~-i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ...+..  .+ .+.+|+|++++.++..... ..|..+.+.++
T Consensus       243 ~~~p~~--r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          243 RKVPLG--RREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             HTCTTT--SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhCCCC--CCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence            001111  24 6999999999999874322 36788888776

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.63  E-value=3.5e-16  Score=147.77  Aligned_cols=202  Identities=8%  Similarity=0.079  Sum_probs=136.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .+++++||||+|+||+++++.|++ .|+.|+++.|+....                 ..++.++.+|++|.+++.++++ 
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------------~~~~~~~~~Dv~~~~~v~~~~~~   65 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------------AENLKFIKADLTKQQDITNVLDI   65 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------------cccceEEecCcCCHHHHHHHHHH
Confidence            467899999999999999999999 789999999886511                 1223589999999999998886 


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCC--CeEEEEecccccccccCCCCCCCCcc
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGV--GHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gV--k~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                          ++|++||++|.....+           .+++|+.++.++++++...-.  .+||++||...+.+.     .+.   
T Consensus        66 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~---  137 (244)
T 4e4y_A           66 IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----PNS---  137 (244)
T ss_dssp             TTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----TTB---
T ss_pred             HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----CCC---
Confidence                7899999999764322           467888899999998876532  479999887632211     111   


Q ss_pred             chhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccc------------eE-EecccccCCCCCcccH
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYN------------VV-VSAEASVDANDYKVAK  206 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~------------i~-~~~~~~~~~~~~~i~v  206 (427)
                        ..|+.+| .+.+.+.+.+.    ..|+++..|+||++..........            .. ......+..  .+.+.
T Consensus       138 --~~Y~asK-aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~p  212 (244)
T 4e4y_A          138 --FAYTLSK-GAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLN--RIAQP  212 (244)
T ss_dssp             --HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTS--SCBCH
T ss_pred             --chhHHHH-HHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCC--CCcCH
Confidence              1233222 23444444433    568999999999765421100000            00 000011111  37899


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +|+|++++.++++... ..|..+++.++.
T Consensus       213 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          213 QEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhcCccccccCCeEeECCCc
Confidence            9999999999875433 368899988773

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.63  E-value=1.1e-14  Score=140.06  Aligned_cols=202  Identities=13%  Similarity=0.082  Sum_probs=132.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-------HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-------AQELARLAASYKILSKEELKRLNAVESNFDSAES   74 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-------~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s   74 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+...       +..+......       ...++.++.+|++|.++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~   76 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA-------AGGQGLALKCDIREEDQ   76 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH-------HTSEEEEEECCTTCHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh-------cCCeEEEEeCCCCCHHH
Confidence            456799999999999999999999999999999998753       2222211110       12456789999999998


Q ss_pred             HHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccc
Q 044905           75 IAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        75 l~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~  132 (427)
                      +.++++       ++|++||++|.....+           .+++|+.++.++++++..    .+..+||++||.+.+.+.
T Consensus        77 v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~  156 (274)
T 3e03_A           77 VRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPA  156 (274)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCC
Confidence            887765       7899999999765432           456888899988888754    466799999887632110


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCC-CCCCCCCCCccceEEecccccCCCCCcccHH
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTS-LTEDFSPESSYNVVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~  207 (427)
                      .        ......|+.+| .+.+.+.+.+    ...|+++..|.|| ++.....    .. ...  ...  ..+.+.+
T Consensus       157 ~--------~~~~~~Y~asK-aal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~----~~-~~~--~~~--~~~~~pe  218 (274)
T 3e03_A          157 W--------WGAHTGYTLAK-MGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI----NM-LPG--VDA--AACRRPE  218 (274)
T ss_dssp             H--------HHHCHHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------C--CCG--GGSBCTH
T ss_pred             C--------CCCCchHHHHH-HHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh----hh-ccc--ccc--cccCCHH
Confidence            0        00112233332 2234444333    3568999999999 5654321    10 111  111  1267899


Q ss_pred             HHHHHHHHHhcCcccc-cCcEE
Q 044905          208 QIASLVADVFSNTAVA-ENKVV  228 (427)
Q Consensus       208 DVA~~v~~al~~~~~~-~g~~~  228 (427)
                      |+|++++.+++....+ .|..+
T Consensus       219 dvA~~v~~l~s~~~~~itG~~i  240 (274)
T 3e03_A          219 IMADAAHAVLTREAAGFHGQFL  240 (274)
T ss_dssp             HHHHHHHHHHTSCCTTCCSCEE
T ss_pred             HHHHHHHHHhCccccccCCeEE
Confidence            9999999998754333 46665

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.63  E-value=7.1e-15  Score=141.80  Aligned_cols=208  Identities=13%  Similarity=0.108  Sum_probs=137.6

Q ss_pred             CCCEEEEEcCCcH--HHHHHHHHHHHCCCeEEEEecCc--chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQ--AGVRIAQTLLREGFSVRAGVPEL--GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~--iG~~lv~~LL~~G~~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ..++|+||||||+  ||+++++.|+++|++|++++|+.  +..+.+...           ..++.++.+|++|.+++.++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~-----------~~~~~~~~~Dl~~~~~v~~~   93 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAE-----------FNPAAVLPCDVISDQEIKDL   93 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGG-----------GCCSEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHh-----------cCCceEEEeecCCHHHHHHH
Confidence            4578999999976  99999999999999999999987  222333221           23457899999999998887


Q ss_pred             hc-------CcCEEEEccCCCCC----CC------------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccc
Q 044905           79 IG-------NAGKVVVTIGPTED----GP------------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAAS  132 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~----~~------------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~  132 (427)
                      ++       ..|+|||++|....    ++            .+++|+.++.++++++...   +..+||++||.+.+.+.
T Consensus        94 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~  173 (280)
T 3nrc_A           94 FVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM  173 (280)
T ss_dssp             HHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC
T ss_pred             HHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC
Confidence            75       47999999997642    11            4567888888998888653   35689999987632111


Q ss_pred             cCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcc
Q 044905          133 TYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKV  204 (427)
Q Consensus       133 ~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i  204 (427)
                           .+..     .|+.++ .+.+.+.+.+    ...|+++..++||++...........  ...  ....+..  .+.
T Consensus       174 -----~~~~-----~Y~asK-aal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--~~~  240 (280)
T 3nrc_A          174 -----PSYN-----TMGVAK-ASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLK--KNV  240 (280)
T ss_dssp             -----TTTH-----HHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTC--SCC
T ss_pred             -----CCch-----hhHHHH-HHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCC--CCC
Confidence                 1111     232222 2244444433    35789999999996654221110000  000  0001111  367


Q ss_pred             cHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+|+|++++.++++... ..|.++++.++.
T Consensus       241 ~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~  271 (280)
T 3nrc_A          241 DIMEVGNTVAFLCSDMATGITGEVVHVDAGY  271 (280)
T ss_dssp             CHHHHHHHHHHTTSGGGTTCCSCEEEESTTG
T ss_pred             CHHHHHHHHHHHhCcccCCcCCcEEEECCCc
Confidence            899999999998874322 468999998874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.63  E-value=5.4e-15  Score=140.65  Aligned_cols=207  Identities=12%  Similarity=0.110  Sum_probs=135.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      .++++||||+|+||+++++.|+++|  +.|+++.|+.+.+..+....          ..++.++.+|++|.+++.++++ 
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----------GDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----------GGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----------CCceEEEECCCCCHHHHHHHHHH
Confidence            3689999999999999999999985  78999999987665554321          1345689999999999888775 


Q ss_pred             ------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|.... .+           .+++|+.++.++++++    ++.+ .+||++||...+..     ..
T Consensus        72 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~-----~~  145 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY-----FS  145 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-----SC
T ss_pred             HHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-----CC
Confidence                  68999999997432 11           4577888999998887    4556 79999998763211     11


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh-c-CCCeEEEEeCCCCCCCCCCCccceEE----ec-------ccccCCCCCccc
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI-E-TDVSYTFIKTSLTEDFSPESSYNVVV----SA-------EASVDANDYKVA  205 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~-~-~gl~~tilRPG~~~~~~~~~~~~i~~----~~-------~~~~~~~~~~i~  205 (427)
                      +.     ..|+.+| .+.+.+.+.+. + .++++..|+||++.............    ..       ...+..  .+.+
T Consensus       146 ~~-----~~Y~asK-~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--r~~~  217 (254)
T 3kzv_A          146 SW-----GAYGSSK-AALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENN--QLLD  217 (254)
T ss_dssp             CS-----HHHHHHH-HHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC------
T ss_pred             Cc-----chHHHHH-HHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcC--CcCC
Confidence            11     1233322 23455555544 2 58999999999665422211100000    00       000111  3678


Q ss_pred             HHHHHHHHHHHhcCc--ccccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNT--AVAENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~--~~~~g~~~nI~~~~  234 (427)
                      .+|+|++++.+++..  .-..|..+++.++.
T Consensus       218 p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          218 SSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             cccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            999999999988744  22468888877664

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.63  E-value=8e-15  Score=145.06  Aligned_cols=213  Identities=14%  Similarity=0.098  Sum_probs=137.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHH--------
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAE--------   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~--------   73 (427)
                      ..++|+||||+|+||++|++.|+++|++|++++ |+...+..+.....      .....++.++.+|++|.+        
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~------~~~~~~~~~~~~Dl~d~~~~~~~~~~  118 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN------ARRPNSAITVQADLSNVATAPVSGAD  118 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH------HHSTTCEEEEECCCSSSCBCC-----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH------hhcCCeEEEEEeeCCCchhccccccc
Confidence            346899999999999999999999999999999 98766554432211      000135668999999988        


Q ss_pred             ---------HHHHHhc-------CcCEEEEccCCCCCCC-------------------------CccccHHHHHHHHHHH
Q 044905           74 ---------SIAKAIG-------NAGKVVVTIGPTEDGP-------------------------TSEVSTSDAFQVIQAA  112 (427)
Q Consensus        74 ---------sl~~al~-------g~d~Vi~~ag~~~~~~-------------------------~~~vn~~~~~~ll~Aa  112 (427)
                               ++.++++       ++|+|||+||.....+                         .+++|+.++.++++++
T Consensus       119 ~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          119 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             --CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                     8877765       7899999999754322                         2356777777787776


Q ss_pred             H----HcC------CCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCC
Q 044905          113 Q----LAG------VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLT  178 (427)
Q Consensus       113 ~----~~g------Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~  178 (427)
                      .    +.+      ..+||++||...+.+.     .+..     .|+.+| .+.+.+.+.+    ...|++++.|+||++
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~~~-----~~~~-----~Y~asK-aal~~l~~~la~el~~~gIrvn~v~PG~v  267 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQPL-----LGYT-----IYTMAK-GALEGLTRSAALELAPLQIRVNGVGPGLS  267 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTSCC-----TTCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhccCC-----CCcH-----HHHHHH-HHHHHHHHHHHHHHhhcCcEEEEEecCcc
Confidence            5    345      6799999987632211     1111     233222 2344444443    356899999999966


Q ss_pred             CCCCCCCccceEEe-cccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          179 EDFSPESSYNVVVS-AEASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       179 ~~~~~~~~~~i~~~-~~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ..... ........ ....+.. ..+.+.+|||++++.++..... ..|..+++.++.
T Consensus       268 ~T~~~-~~~~~~~~~~~~~p~~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  323 (328)
T 2qhx_A          268 VLVDD-MPPAVWEGHRSKVPLY-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  323 (328)
T ss_dssp             SCCCC-SCHHHHHHHHTTCTTT-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCcc-ccHHHHHHHHhhCCCC-CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            54321 11000000 0001111 0267999999999999874322 368888888773

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.63  E-value=4.9e-15  Score=139.64  Aligned_cols=204  Identities=12%  Similarity=0.092  Sum_probs=133.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC--CCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF--DSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl--~D~~sl~~al   79 (427)
                      +..++|+||||+|+||+++++.|+++|++|++++|+..+...+......      ....+..++.+|+  +|.+++.+++
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~~~~~d~d~~~~~~~~~~~   85 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS------AGQPQPLIIALNLENATAQQYRELA   85 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------TTSCCCEEEECCTTTCCHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh------cCCCCceEEEeccccCCHHHHHHHH
Confidence            3457899999999999999999999999999999998766554332211      1123455778877  8888877766


Q ss_pred             c-------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           80 G-------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                      +       ++|++||++|.... .+           .+++|+.++.++++++    ++.+..+||++||...+.+.    
T Consensus        86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----  161 (247)
T 3i1j_A           86 ARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR----  161 (247)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC----
T ss_pred             HHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC----
Confidence            4       78999999997532 21           4567888999888887    44566789999877632111    


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh----c-CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI----E-TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~-~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                       .+..     .|+.+| .+.+.+.+.+.    . .++++..|.||++.....   ... .  .  ......+.+.+|+|+
T Consensus       162 -~~~~-----~Y~~sK-~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~---~~~-~--~--~~~~~~~~~p~dva~  226 (247)
T 3i1j_A          162 -ANWG-----AYGVSK-FATEGLMQTLADELEGVTAVRANSINPGATRTGMR---AQA-Y--P--DENPLNNPAPEDIMP  226 (247)
T ss_dssp             -TTCH-----HHHHHH-HHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH---HHH-S--T--TSCGGGSCCGGGGTH
T ss_pred             -CCcc-----hhHHHH-HHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc---hhc-c--c--ccCccCCCCHHHHHH
Confidence             1111     232222 23444444433    3 689999999997754211   000 0  0  011123568899999


Q ss_pred             HHHHHhcCccc-ccCcEEEE
Q 044905          212 LVADVFSNTAV-AENKVVKV  230 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI  230 (427)
                      +++.+++.... ..|..+++
T Consensus       227 ~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          227 VYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             HHHHHHSGGGTTCCSCEEEC
T ss_pred             HHHHHhCchhccccCeeecC
Confidence            99998874322 35666654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.61  E-value=6.9e-15  Score=140.38  Aligned_cols=216  Identities=13%  Similarity=0.065  Sum_probs=138.8

Q ss_pred             CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +..++|+||||+  |+||+++++.|+++|++|+++.|+.... .........      ....++.++.+|++|.+++.++
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~~~~v~~~   91 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEK------TYGIKAKAYKCQVDSYESCEKL   91 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHH------HHCCCEECCBCCTTCHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHH------hcCCceeEEecCCCCHHHHHHH
Confidence            346789999999  8999999999999999999999887643 222211110      0124567899999999998887


Q ss_pred             hc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           79 IG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                      ++       ++|++||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+...+..   
T Consensus        92 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  168 (267)
T 3gdg_A           92 VKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF---  168 (267)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC---
Confidence            75       5799999999765432           4567888888888877    556678999998876322110   


Q ss_pred             CCCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEE--ecccccCCCCCcccHHHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVV--SAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~--~~~~~~~~~~~~i~v~DVA~  211 (427)
                      ..+.     ..|+.++ .+.+.+.+.+.   ...+++..+.||++..........-..  .....+..  .+.+.+|+|+
T Consensus       169 ~~~~-----~~Y~~sK-~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--r~~~~~dva~  240 (267)
T 3gdg_A          169 PQEQ-----TSYNVAK-AGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMG--RDGLAKELKG  240 (267)
T ss_dssp             SSCC-----HHHHHHH-HHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTS--SCEETHHHHH
T ss_pred             CCCC-----CcchHHH-HHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCC--CCcCHHHHHh
Confidence            0111     1233222 23455554444   223899999999665422211100000  00111111  3678999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.+++.... ..|..+++.++.
T Consensus       241 ~~~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          241 AYVYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             HHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             HhheeecCccccccCCEEEECCce
Confidence            99998875322 468899998773

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.61  E-value=2e-15  Score=141.78  Aligned_cols=197  Identities=14%  Similarity=0.081  Sum_probs=132.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |..++|+||||||+||+++++.|+++|++|++++|+......                 ...++.+|++|.+++.++++ 
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------------~~~~~~~D~~~~~~~~~~~~~   63 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----------------SNILVDGNKNWTEQEQSILEQ   63 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----------------EEEECCTTSCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc-----------------ccEEEeCCCCCHHHHHHHHHH
Confidence            456789999999999999999999999999999999764220                 12367899999998887764 


Q ss_pred             --------CcCEEEEccCCCCCCC------------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCC
Q 044905           81 --------NAGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 --------g~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~  138 (427)
                              ++|+|||++|.....+            .+++|+.++.++++++...-  ..+||++||.+.+..       
T Consensus        64 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-------  136 (236)
T 1ooe_A           64 TASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-------  136 (236)
T ss_dssp             HHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC-------
T ss_pred             HHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC-------
Confidence                    7899999999653211            45678889899999887642  258999988764221       


Q ss_pred             CCCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                       .+.  ...|+.++ .+.+.+.+.+.      ..|++++.++||++.....   ... .  .....  ..+++.+|+|++
T Consensus       137 -~~~--~~~Y~~sK-~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~---~~~-~--~~~~~--~~~~~~~dvA~~  204 (236)
T 1ooe_A          137 -TPS--MIGYGMAK-AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN---RKW-M--PNADH--SSWTPLSFISEH  204 (236)
T ss_dssp             -CTT--BHHHHHHH-HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH---HHH-S--TTCCG--GGCBCHHHHHHH
T ss_pred             -CCC--cHHHHHHH-HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcch---hhc-C--CCccc--cccCCHHHHHHH
Confidence             111  12233332 33555555554      3469999999997654211   000 0  00111  136788999999


Q ss_pred             HHHHhcCcc--cccCcEEEEecCC
Q 044905          213 VADVFSNTA--VAENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~--~~~g~~~nI~~~~  234 (427)
                      ++..+..+.  ...|..+.+.++.
T Consensus       205 i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          205 LLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             HHHHHcCCCcccccccEEEEecCC
Confidence            986663222  2358888887764

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.61  E-value=2.9e-14  Score=142.20  Aligned_cols=206  Identities=11%  Similarity=0.094  Sum_probs=134.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-------HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-------AQELARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-------~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      ..++|+||||+|+||++|++.|+++|++|+++.|+.+.       +..+......       ...++.++.+|++|.+++
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-------~g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-------VGGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-------TTCEEEEEECCTTCHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-------cCCeEEEEEccCCCHHHH
Confidence            45789999999999999999999999999999998864       2222111110       023556899999999998


Q ss_pred             HHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEeccccccccc
Q 044905           76 AKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        76 ~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~  133 (427)
                      .++++       ++|+|||++|.....+           .+++|+.++.++++++.    +.+..+||++||...+..  
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~--  194 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNP--  194 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCG--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCC--
Confidence            88775       7999999999754322           56789999999999884    446789999998763211  


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCC-CCCCCCCCccceEEecccccCCCCCcccHHHH
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSL-TEDFSPESSYNVVVSAEASVDANDYKVAKSQI  209 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~-~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DV  209 (427)
                       .+..+..     .|+.+| .+.+.+.+.+.   ..|+++..|.||. ++....   ..+  .+. ....  .+.+.+||
T Consensus       195 -~~~~~~~-----~Y~aSK-aal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~---~~~--~~~-~~~~--r~~~pedv  259 (346)
T 3kvo_A          195 -VWFKQHC-----AYTIAK-YGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAM---DML--GGP-GIES--QCRKVDII  259 (346)
T ss_dssp             -GGTSSSH-----HHHHHH-HHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHH---HHH--CC---CGG--GCBCTHHH
T ss_pred             -CCCCCch-----HHHHHH-HHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHH---Hhh--ccc-cccc--cCCCHHHH
Confidence             0111112     232222 22344444333   2689999999994 544211   000  011 1111  36689999


Q ss_pred             HHHHHHHhcCcccccCcEEEEecC
Q 044905          210 ASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      |++++.+++......|..+ +.++
T Consensus       260 A~~v~~L~s~~~~itG~~i-vdgg  282 (346)
T 3kvo_A          260 ADAAYSIFQKPKSFTGNFV-IDEN  282 (346)
T ss_dssp             HHHHHHHHTSCTTCCSCEE-EHHH
T ss_pred             HHHHHHHHhcCCCCCceEE-ECCc
Confidence            9999999986322356655 5443

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.61  E-value=3.5e-15  Score=140.82  Aligned_cols=200  Identities=14%  Similarity=0.165  Sum_probs=117.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH---HH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA---KA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~---~a   78 (427)
                      +..++|+||||+|+||+++++.|++ |+.|++++|+......+..            ..++.++.+|++|.++..   +.
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------------~~~~~~~~~D~~~~~~~~~~~~~   69 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------------IEGVEPIESDIVKEVLEEGGVDK   69 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------------STTEEEEECCHHHHHHTSSSCGG
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------------hcCCcceecccchHHHHHHHHHH
Confidence            3467899999999999999999987 9999999999876555432            123468899998875421   11


Q ss_pred             ---hcCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           79 ---IGNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        79 ---l~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                         +.++|++||++|.....+           .+++|+.++.++++++.    +.+ .+||++||...+...     .+.
T Consensus        70 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-----~~~  143 (245)
T 3e9n_A           70 LKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH-----PGN  143 (245)
T ss_dssp             GTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------C
T ss_pred             HHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC-----CCc
Confidence               236899999999765432           35677778777777663    344 789999987643211     111


Q ss_pred             CccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                           ..|+.+| .+.+.+.+.+.    ..|+++..++||++......   .... ..........+++.+|+|++++.+
T Consensus       144 -----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~---~~~~-~~~~~~~~~~~~~p~dvA~~i~~l  213 (245)
T 3e9n_A          144 -----TIYAASK-HALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ---GLMD-SQGTNFRPEIYIEPKEIANAIRFV  213 (245)
T ss_dssp             -----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCGGGSCHHHHHHHHHHH
T ss_pred             -----hHHHHHH-HHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhh---hhhh-hhhcccccccCCCHHHHHHHHHHH
Confidence                 2233332 23455554443    46899999999966542211   1110 001111112478999999999999


Q ss_pred             hcCcccccCcEEEEec
Q 044905          217 FSNTAVAENKVVKVFT  232 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~  232 (427)
                      ++.+.  .+.++++.-
T Consensus       214 ~~~~~--~~~~~~i~~  227 (245)
T 3e9n_A          214 IDAGE--TTQITNVDV  227 (245)
T ss_dssp             HTSCT--TEEEEEEEE
T ss_pred             HcCCC--ccceeeeEE
Confidence            97642  456666643

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.61  E-value=1.6e-14  Score=140.34  Aligned_cols=213  Identities=14%  Similarity=0.106  Sum_probs=136.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHH-------
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAE-------   73 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~-------   73 (427)
                      +..++++||||+|+||+++++.|+++|++|++++ |+......+.....      .....++.++.+|++|.+       
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~------~~~~~~~~~~~~Dl~~~~~~~~~~~   80 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLN------ARRPNSAITVQADLSNVATAPVSGA   80 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH------HHSTTCEEEEECCCSSSCBCCCC--
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHh------hhcCCeeEEEEeecCCccccccccc
Confidence            3457899999999999999999999999999999 98766544432211      000235668999999988       


Q ss_pred             ----------HHHHHhc-------CcCEEEEccCCCCCCC-------------------------CccccHHHHHHHHHH
Q 044905           74 ----------SIAKAIG-------NAGKVVVTIGPTEDGP-------------------------TSEVSTSDAFQVIQA  111 (427)
Q Consensus        74 ----------sl~~al~-------g~d~Vi~~ag~~~~~~-------------------------~~~vn~~~~~~ll~A  111 (427)
                                ++.++++       ++|++||++|.....+                         .+++|+.++.+++++
T Consensus        81 ~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           81 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             --CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                      8877765       7899999999754322                         235667777778777


Q ss_pred             HH----HcC------CCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCC
Q 044905          112 AQ----LAG------VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSL  177 (427)
Q Consensus       112 a~----~~g------Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~  177 (427)
                      +.    +.+      ..+||++||...+...     .+.     ..|+.+| .+.+.+.+.+    ...|+++..|+||+
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~-----~~~-----~~Y~asK-aa~~~l~~~la~e~~~~gI~vn~v~PG~  229 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPL-----LGY-----TIYTMAK-GALEGLTRSAALELAPLQIRVNGVGPGL  229 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCC-----TTC-----HHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCC-----CCC-----chhHHHH-HHHHHHHHHHHHHHHhcCeEEEEEeeCC
Confidence            65    344      5789999987632211     111     1233222 2234444333    35689999999997


Q ss_pred             CCCCCCCCccceEEecccccCCCC--CcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          178 TEDFSPESSYNVVVSAEASVDAND--YKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       178 ~~~~~~~~~~~i~~~~~~~~~~~~--~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.... ...... .. ......+.  .+.+.+|||++++.++..... ..|..+.+.++.
T Consensus       230 v~T~~-~~~~~~-~~-~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  286 (291)
T 1e7w_A          230 SVLVD-DMPPAV-WE-GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  286 (291)
T ss_dssp             BCCGG-GSCHHH-HH-HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ccCCc-cCCHHH-HH-HHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence            65422 100000 00 00001111  267899999999999874332 367888887773

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.60  E-value=2.5e-14  Score=138.20  Aligned_cols=210  Identities=11%  Similarity=0.072  Sum_probs=136.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+.+..+....          ..++.++.+|++|.+++.++++ 
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~   72 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----------GGNAVGVVGDVRSLQDQKRAAER   72 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------BTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----------CCcEEEEEcCCCCHHHHHHHHHH
Confidence            45679999999999999999999999999999999987665553321          2345689999999988877764 


Q ss_pred             ------CcCEEEEccCCCCCCC----------------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCC
Q 044905           81 ------NAGKVVVTIGPTEDGP----------------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~----------------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~  135 (427)
                            ++|++||++|......                .+++|+.++.++++++...   +-.++|++||...+...   
T Consensus        73 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---  149 (281)
T 3zv4_A           73 CLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN---  149 (281)
T ss_dssp             HHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS---
T ss_pred             HHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC---
Confidence                  6799999999753211                2357888888888887542   12689999887632111   


Q ss_pred             CCCCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCC-ccceE---Eec--------ccccCCC
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPES-SYNVV---VSA--------EASVDAN  200 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~-~~~i~---~~~--------~~~~~~~  200 (427)
                        .+..     .|+.+| .+.+.+.+.+.   ..++++..|.||++....... .....   ...        ...+.. 
T Consensus       150 --~~~~-----~Y~asK-aa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-  220 (281)
T 3zv4_A          150 --GGGP-----LYTATK-HAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG-  220 (281)
T ss_dssp             --SSCH-----HHHHHH-HHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTS-
T ss_pred             --CCCc-----hhHHHH-HHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCC-
Confidence              1111     233222 23444444433   234999999999665432110 00000   000        001111 


Q ss_pred             CCcccHHHHHHHHHHHhcCc-cc-ccCcEEEEecCC
Q 044905          201 DYKVAKSQIASLVADVFSNT-AV-AENKVVKVFTDP  234 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~-~~-~~g~~~nI~~~~  234 (427)
                       .+.+.+|||.+++.+++++ .. ..|..+++.++.
T Consensus       221 -r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~  255 (281)
T 3zv4_A          221 -RMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM  255 (281)
T ss_dssp             -SCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred             -CCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence             3678999999999998732 22 478999998874

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.60  E-value=2.5e-14  Score=136.24  Aligned_cols=210  Identities=13%  Similarity=0.068  Sum_probs=127.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..++++||||+|+||+++++.|+++|++|++++|+.+....+......       ...++.++.+|++|.+++.+++  
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS-------LGGQCVPVVCDSSQESEVRSLFEQ   75 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------HSSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-------cCCceEEEECCCCCHHHHHHHHHH
Confidence            5668999999999999999999999999999999998765444322111       0135568999999998887765  


Q ss_pred             ------cCcCEEEEccCC--C-----CCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEeccccccc
Q 044905           80 ------GNAGKVVVTIGP--T-----EDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAA  131 (427)
Q Consensus        80 ------~g~d~Vi~~ag~--~-----~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~  131 (427)
                            ..+|++||++|.  .     ...+           .+++|+.++.++.+++.    +.+..+||++||.+.+..
T Consensus        76 ~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  155 (260)
T 2qq5_A           76 VDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY  155 (260)
T ss_dssp             HHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC
T ss_pred             HHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC
Confidence                  357999999952  1     0111           34566667766665553    456789999998763211


Q ss_pred             ccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCc-cceEEe-cc-cc-cCCCC-C
Q 044905          132 STYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESS-YNVVVS-AE-AS-VDAND-Y  202 (427)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~-~~i~~~-~~-~~-~~~~~-~  202 (427)
                            .+.     ..|+.+| .+.+.+.+.+.    ..|++++.|+||++........ ..-... .. .. ...+. .
T Consensus       156 ------~~~-----~~Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T 2qq5_A          156 ------MFN-----VPYGVGK-AACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSS  223 (260)
T ss_dssp             ------CSS-----HHHHHHH-HHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CH
T ss_pred             ------CCC-----CchHHHH-HHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhcc
Confidence                  011     2333332 33455544433    5689999999996654221100 000000 00 00 00011 1


Q ss_pred             cccHHHHHHHHHHHhcCccc--ccCcEEEE
Q 044905          203 KVAKSQIASLVADVFSNTAV--AENKVVKV  230 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~--~~g~~~nI  230 (427)
                      ..+.+|+|++++.+++....  ..|..+.+
T Consensus       224 ~~~pe~va~~v~~l~s~~~~~~itG~~i~~  253 (260)
T 2qq5_A          224 AETTELSGKCVVALATDPNILSLSGKVLPS  253 (260)
T ss_dssp             HHHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred             CCCHHHHHHHHHHHhcCcccccccceeech
Confidence            35789999999999875431  24555543

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.60  E-value=3.7e-15  Score=140.43  Aligned_cols=196  Identities=10%  Similarity=0.025  Sum_probs=133.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++|+||||||+||+++++.|+++|++|++++|+......                 ...++.+|++|.+++.++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-----------------~~~~~~~D~~~~~~v~~~~~~~   68 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS-----------------ASVIVKMTDSFTEQADQVTAEV   68 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS-----------------EEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC-----------------CcEEEEcCCCCHHHHHHHHHHH
Confidence            34689999999999999999999999999999998764220                 12367899999998887765  


Q ss_pred             -------CcCEEEEccCCCCCCC------------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP------------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~------------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             ++|++||++|.....+            .+++|+.++.++++++...-  -.+||++||.+.+.+.       
T Consensus        69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  141 (241)
T 1dhr_A           69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-------  141 (241)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-------
T ss_pred             HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-------
Confidence                   6899999999653211            35678889999999887641  2589999887643211       


Q ss_pred             CCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                       +..  ..|+.++ .+.+.+.+.+.      ..|++++.|+||+++....   ... .  .....  ..+++.+|+|+++
T Consensus       142 -~~~--~~Y~asK-~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~---~~~-~--~~~~~--~~~~~~~~vA~~v  209 (241)
T 1dhr_A          142 -PGM--IGYGMAK-GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN---RKS-M--PEADF--SSWTPLEFLVETF  209 (241)
T ss_dssp             -TTB--HHHHHHH-HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH---HHH-S--TTSCG--GGSEEHHHHHHHH
T ss_pred             -CCc--hHHHHHH-HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc---ccc-C--cchhh--ccCCCHHHHHHHH
Confidence             111  2233332 33555666554      3469999999997644211   000 0  00111  1357889999999


Q ss_pred             HHHhcCccc-ccCcEEEEecCC
Q 044905          214 ADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +.+++.... ..|..+.+.++.
T Consensus       210 ~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          210 HDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHHHTTTTCCCTTCEEEEEEET
T ss_pred             HHHhcCCCcCccceEEEEeCCC
Confidence            998875432 358888887764

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.60  E-value=1.8e-14  Score=150.11  Aligned_cols=196  Identities=15%  Similarity=0.142  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcch---HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGA---AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~---~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +.++|+||||||+||.+|+++|+++|+. |++++|+...   ...+......       ...++.++.+|++|.+++..+
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-------~g~~v~~~~~Dv~d~~~v~~~  297 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-------LGARTTVAACDVTDRESVREL  297 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh-------cCCEEEEEEeCCCCHHHHHHH
Confidence            4578999999999999999999999984 9999998752   2222211100       013566899999999999999


Q ss_pred             hcCc------CEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           79 IGNA------GKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        79 l~g~------d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                      ++.+      |+|||++|....+.           .+.+|+.++.++++++...+.++||++||.+...+..     +..
T Consensus       298 ~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~-----g~~  372 (486)
T 2fr1_A          298 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-----GLG  372 (486)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-----TCT
T ss_pred             HHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC-----CCH
Confidence            8765      99999999765432           4567899999999999988899999999875322211     112


Q ss_pred             ccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      .|.     ..+ ...+.+...+...|+++++|+||.+.+..  .......  ......++..++.+|+++++..++...
T Consensus       373 ~Ya-----aak-a~l~~la~~~~~~gi~v~~i~pG~~~~~g--m~~~~~~--~~~~~~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          373 GYA-----PGN-AYLDGLAQQRRSDGLPATAVAWGTWAGSG--MAEGPVA--DRFRRHGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             TTH-----HHH-HHHHHHHHHHHHTTCCCEEEEECCBC----------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHH-----HHH-HHHHHHHHHHHhcCCeEEEEECCeeCCCc--ccchhHH--HHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            222     111 12344445555789999999999654311  0011101  001112345799999999999999753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.59  E-value=9.3e-15  Score=138.89  Aligned_cols=208  Identities=15%  Similarity=0.123  Sum_probs=128.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH----Hh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK----AI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~----al   79 (427)
                      |++|+||||||+||+++++.|+++|++|++++|+.++.+.+......        ..++..+  |..+.+.+.+    .+
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~--------~~~~~~~--d~~~v~~~~~~~~~~~   70 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET--------YPQLKPM--SEQEPAELIEAVTSAY   70 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH--------CTTSEEC--CCCSHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------CCcEEEE--CHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999998765544321000        0111222  6666443332    33


Q ss_pred             cCcCEEEEccCCC-CCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCCcc
Q 044905           80 GNAGKVVVTIGPT-EDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        80 ~g~d~Vi~~ag~~-~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                      .++|+|||++|.. ...+           .+++|+.++.++++++.    +.+..+||++||...+.+.     .+.   
T Consensus        71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~~~---  142 (254)
T 1zmt_A           71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----KEL---  142 (254)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----TTC---
T ss_pred             CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----CCc---
Confidence            5799999999976 3222           45677778888877764    4567899999987642211     111   


Q ss_pred             chhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCC-CCCCCCc-cceEEe--------cccccCCCCCcccHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTE-DFSPESS-YNVVVS--------AEASVDANDYKVAKSQI  209 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~-~~~~~~~-~~i~~~--------~~~~~~~~~~~i~v~DV  209 (427)
                        ..|+.+| .+.+.+.+.+    ...|++++.|+||.+. ....... ..+...        ....+..  .+.+.+|+
T Consensus       143 --~~Y~~sK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~--~~~~p~dv  217 (254)
T 1zmt_A          143 --STYTSAR-AGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ--RLGTQKEL  217 (254)
T ss_dssp             --HHHHHHH-HHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS--SCBCHHHH
T ss_pred             --hHHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCC--CCcCHHHH
Confidence              1233222 2344444433    3568999999999651 1100000 000000        0001111  36799999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.+++.... ..|..+++.++.
T Consensus       218 A~~v~~l~s~~~~~~tG~~~~vdgG~  243 (254)
T 1zmt_A          218 GELVAFLASGSCDYLTGQVFWLAGGF  243 (254)
T ss_dssp             HHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             HHHHHHHhCcccCCccCCEEEECCCc
Confidence            9999999875432 368899988774

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.58  E-value=4.5e-14  Score=136.84  Aligned_cols=204  Identities=9%  Similarity=0.080  Sum_probs=133.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al~--   80 (427)
                      .++|+||||+|+||+++++.|+++|++|++++|+..+..........      ....++.++.+|++|. +++..+++  
T Consensus        12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~------~~~~~~~~~~~Dl~~~~~~v~~~~~~~   85 (311)
T 3o26_A           12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN------SNHENVVFHQLDVTDPIATMSSLADFI   85 (311)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT------TTCCSEEEEECCTTSCHHHHHHHHHHH
T ss_pred             CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------cCCCceEEEEccCCCcHHHHHHHHHHH
Confidence            46899999999999999999999999999999998765544332111      1124677999999997 77666554  


Q ss_pred             -----CcCEEEEccCCCCCC-----------------------------------------CCccccHHHHHHHHHHHHH
Q 044905           81 -----NAGKVVVTIGPTEDG-----------------------------------------PTSEVSTSDAFQVIQAAQL  114 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~-----------------------------------------~~~~vn~~~~~~ll~Aa~~  114 (427)
                           ++|+|||+||.....                                         ..+++|+.++.++++++..
T Consensus        86 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~  165 (311)
T 3o26_A           86 KTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIP  165 (311)
T ss_dssp             HHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhH
Confidence                 799999999976321                                         0267888898888887743


Q ss_pred             ----cCCCeEEEEecccccccccCC----------------------------------CCCCCCccchhhhhccccccH
Q 044905          115 ----AGVGHVAIIYDGNTTAASTYN----------------------------------VLDGISSFFNNLFSRNQPLTV  156 (427)
Q Consensus       115 ----~gVk~~V~vSSs~v~~~~~~~----------------------------------~~~~~~~~~~~~~~k~~~l~~  156 (427)
                          .+..+||++||.+...+....                                  ...+.++ ....|+.+| .+.
T Consensus       166 ~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~SK-~a~  243 (311)
T 3o26_A          166 LLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPS-FGAAYTTSK-ACL  243 (311)
T ss_dssp             HHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-SCHHHHHHH-HHH
T ss_pred             hhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcc-cchhhHHHH-HHH
Confidence                466799999987632211000                                  0001111 112344333 345


Q ss_pred             HHHHHHHh-c-CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEE
Q 044905          157 PEFLQKVI-E-TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKV  230 (427)
Q Consensus       157 E~~l~~l~-~-~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI  230 (427)
                      +.+.+.+. + .++++..|.||++.....   ..            ....+.++.|+.++.++..++...+..|..
T Consensus       244 ~~~~~~la~e~~~i~v~~v~PG~v~T~~~---~~------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~  304 (311)
T 3o26_A          244 NAYTRVLANKIPKFQVNCVCPGLVKTEMN---YG------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYD  304 (311)
T ss_dssp             HHHHHHHHHHCTTSEEEEECCCSBCSGGG---TT------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEET
T ss_pred             HHHHHHHHhhcCCceEEEecCCceecCCc---CC------------CCCCCHHHHHHHHHHHHhCCCCCCCceEec
Confidence            55655555 2 369999999997754211   00            124578899999998876554434444433

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.58  E-value=8.8e-14  Score=132.37  Aligned_cols=204  Identities=11%  Similarity=0.062  Sum_probs=134.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----   79 (427)
                      .++|+||||++.||+++++.|+++|++|.+..|+.+.+.++...           ..++..+.+|++|++++.+++    
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE-----------RPNLFYFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT-----------CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-----------cCCEEEEEecCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999998766555332           234568999999998888765    


Q ss_pred             ---cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCCc
Q 044905           80 ---GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        80 ---~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                         .++|++||+||.....+           .+++|+.++..+.+++...   +-.++|.+||.....+.     .....
T Consensus        71 ~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~-----~~~~~  145 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE-----PDSEA  145 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC-----TTCHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC-----CCCHH
Confidence               36899999999766533           5667888888777766432   23689999887632111     11122


Q ss_pred             cchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      |..     +| -+...+.+.+.   ..++++..|-||+++.........-.  ....+..  -+...+|||.+++.+++.
T Consensus       146 Y~a-----sK-aal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~~--~~~~Pl~--R~g~pediA~~v~fL~s~  215 (247)
T 3ged_A          146 YAS-----AK-GGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQED--CAAIPAG--KVGTPKDISNMVLFLCQQ  215 (247)
T ss_dssp             HHH-----HH-HHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHH--HHTSTTS--SCBCHHHHHHHHHHHHHC
T ss_pred             HHH-----HH-HHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHHH--HhcCCCC--CCcCHHHHHHHHHHHHhC
Confidence            222     11 11222222222   34899999999977543221111000  0111111  256899999999998874


Q ss_pred             cccccCcEEEEecCC
Q 044905          220 TAVAENKVVKVFTDP  234 (427)
Q Consensus       220 ~~~~~g~~~nI~~~~  234 (427)
                       +-..|..+.+-++-
T Consensus       216 -~~iTG~~i~VDGG~  229 (247)
T 3ged_A          216 -DFITGETIIVDGGM  229 (247)
T ss_dssp             -SSCCSCEEEESTTG
T ss_pred             -CCCCCCeEEECcCH
Confidence             33478888888773

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.57  E-value=1.8e-14  Score=150.86  Aligned_cols=195  Identities=15%  Similarity=0.119  Sum_probs=133.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcch---HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGA---AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~---~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +.++|+||||||+||.+|+++|+++|+ +|++++|+...   ..++......       ...++.++.+|++|.+++.++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-------~g~~v~~~~~Dvtd~~~v~~~  330 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG-------HGCEVVHAACDVAERDALAAL  330 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT-------TTCEEEEEECCSSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh-------cCCEEEEEEeCCCCHHHHHHH
Confidence            457899999999999999999999998 69999998742   2232221110       023567899999999999999


Q ss_pred             hcC--cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccCCCCCCCCccc
Q 044905           79 IGN--AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        79 l~g--~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                      ++.  +|+|||++|....+.           .+.+|+.++.++++++... +.++||++||.+...+..     +.    
T Consensus       331 ~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~-----g~----  401 (511)
T 2z5l_A          331 VTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA-----GQ----  401 (511)
T ss_dssp             HHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT-----TB----
T ss_pred             HhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC-----CC----
Confidence            975  999999999765432           3467888999999998776 788999999875322211     11    


Q ss_pred             hhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          145 NNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                       ..|+..+ ...+.+.+.+...|+++++|+||++.+..  .......  ......++..++.+|+++++..++..
T Consensus       402 -~~YaaaK-a~ld~la~~~~~~gi~v~sv~pG~~~~tg--m~~~~~~--~~~~~~g~~~l~~e~~a~~l~~al~~  470 (511)
T 2z5l_A          402 -GAYAAAN-AALDALAERRRAAGLPATSVAWGLWGGGG--MAAGAGE--ESLSRRGLRAMDPDAAVDALLGAMGR  470 (511)
T ss_dssp             -HHHHHHH-HHHHHHHHHHHTTTCCCEEEEECCBCSTT--CCCCHHH--HHHHHHTBCCBCHHHHHHHHHHHHHH
T ss_pred             -HHHHHHH-HHHHHHHHHHHHcCCcEEEEECCcccCCc--ccccccH--HHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence             1222222 23566666666789999999999763211  1111000  00011233579999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.57  E-value=5.3e-14  Score=145.29  Aligned_cols=211  Identities=16%  Similarity=0.150  Sum_probs=135.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||+|+||.++++.|+++|++|+++.|+... ..+......         .+..++.+|++|.+++.++++  
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~---------~~~~~~~~Dvtd~~~v~~~~~~~  281 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK---------VGGTALTLDVTADDAVDKITAHV  281 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH---------HTCEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------cCCeEEEEecCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999987542 222211111         123489999999888887764  


Q ss_pred             -----C-cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc----CCCeEEEEecccccccccCCCCCC
Q 044905           81 -----N-AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA----GVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g-~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~----gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           + +|+|||++|......           .+++|+.++.++.+++...    +..+||++||.+...+..     +
T Consensus       282 ~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----g  356 (454)
T 3u0b_A          282 TEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----G  356 (454)
T ss_dssp             HHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----T
T ss_pred             HHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----C
Confidence                 4 999999999865432           4678888999999999876    667999999876322211     1


Q ss_pred             CCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      ...     |+..+ ...+.+.+    .+...|+++..|.||++.....................-..+.+.+|||++++.
T Consensus       357 ~~~-----YaasK-aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~f  430 (454)
T 3u0b_A          357 QTN-----YATTK-AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAY  430 (454)
T ss_dssp             CHH-----HHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHH
T ss_pred             CHH-----HHHHH-HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHH
Confidence            122     22221 11233333    334679999999999765422111000000000000000125689999999999


Q ss_pred             HhcCccc-ccCcEEEEecCC
Q 044905          216 VFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.... ..|.++++.++.
T Consensus       431 L~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          431 FASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             HHCGGGTTCCSCEEEESSSB
T ss_pred             HhCCccCCCCCcEEEECCcc
Confidence            8874332 468888887764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.56  E-value=2.1e-14  Score=141.60  Aligned_cols=201  Identities=19%  Similarity=0.211  Sum_probs=129.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec---------CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP---------ELGAAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R---------~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      +..++|+||||+|+||+++++.|+++|++|++.+|         +..+...+.......          -..+.+|+.|.
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~----------~~~~~~D~~~~   76 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----------GGKAVANYDSV   76 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----------TCEEEEECCCG
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh----------CCeEEEeCCCH
Confidence            34578999999999999999999999999999754         554444332211110          01345899997


Q ss_pred             HHHHHHh-------cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccc
Q 044905           73 ESIAKAI-------GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTA  130 (427)
Q Consensus        73 ~sl~~al-------~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~  130 (427)
                      +++.+++       .++|+|||++|.....+           .+++|+.++.++++++    ++.+..+||++||.+...
T Consensus        77 ~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~  156 (319)
T 1gz6_A           77 EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  156 (319)
T ss_dssp             GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcc
Confidence            7655543       47999999999765332           4567888888888776    446778999999865211


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccH
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v  206 (427)
                      +..     +.     ..|+.+| .+.+.+.+.+.    ..|+++..|+||.+.++..    .. ..  ...   ..+++.
T Consensus       157 ~~~-----~~-----~~Y~aSK-~a~~~~~~~la~el~~~gI~vn~v~PG~~t~~~~----~~-~~--~~~---~~~~~p  215 (319)
T 1gz6_A          157 GNF-----GQ-----ANYSAAK-LGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTE----TV-MP--EDL---VEALKP  215 (319)
T ss_dssp             CCT-----TC-----HHHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTG----GG-SC--HHH---HHHSCG
T ss_pred             CCC-----CC-----HHHHHHH-HHHHHHHHHHHHHhcccCEEEEEEeCCCcccccc----cc-CC--hhh---hccCCH
Confidence            110     11     2333332 33444444433    4689999999996533211    10 00  000   125688


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      +|+|.+++.++..+....|..|++.++
T Consensus       216 ~dvA~~~~~l~s~~~~~tG~~~~v~GG  242 (319)
T 1gz6_A          216 EYVAPLVLWLCHESCEENGGLFEVGAG  242 (319)
T ss_dssp             GGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHhCchhhcCCCEEEECCC
Confidence            999999999887543346788888766

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.56  E-value=2.5e-14  Score=133.15  Aligned_cols=191  Identities=14%  Similarity=0.071  Sum_probs=128.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||+|+||+++++.|+++|++|+++.|+..                           +|++|.+++.++++  
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------~D~~~~~~v~~~~~~~   57 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------LDISDEKSVYHYFETI   57 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------CCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------cCCCCHHHHHHHHHHh
Confidence            4568999999999999999999999999999998753                           58999998888775  


Q ss_pred             -CcCEEEEccCCCC-CCC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCCCCccch
Q 044905           81 -NAGKVVVTIGPTE-DGP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        81 -g~d~Vi~~ag~~~-~~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                       ++|++||++|... .++           .+++|+.++.++++++...-  -.+||++||...+...     .+.     
T Consensus        58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----~~~-----  127 (223)
T 3uce_A           58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----ANT-----  127 (223)
T ss_dssp             CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----TTC-----
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----CCc-----
Confidence             6899999999762 221           45688889999999987652  2479999877632211     111     


Q ss_pred             hhhhccccccHHHHHHHHh-c-CCCeEEEEeCCCCCCCCCCCccceE----Ee--cccccCCCCCcccHHHHHHHHHHHh
Q 044905          146 NLFSRNQPLTVPEFLQKVI-E-TDVSYTFIKTSLTEDFSPESSYNVV----VS--AEASVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~-~gl~~tilRPG~~~~~~~~~~~~i~----~~--~~~~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      ..|+.+| .+.+.+.+.+. + ..+++..++||++..........-.    ..  ....+..  .+.+.+|+|++++.++
T Consensus       128 ~~Y~asK-~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dvA~~~~~l~  204 (223)
T 3uce_A          128 YVKAAIN-AAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVG--KVGEASDIAMAYLFAI  204 (223)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTC--SCBCHHHHHHHHHHHH
T ss_pred             hHHHHHH-HHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCC--CccCHHHHHHHHHHHc
Confidence            1233222 23455555544 2 1299999999966542111100000    00  0011111  3679999999999988


Q ss_pred             cCcccccCcEEEEecCC
Q 044905          218 SNTAVAENKVVKVFTDP  234 (427)
Q Consensus       218 ~~~~~~~g~~~nI~~~~  234 (427)
                      +. ....|..+++.++.
T Consensus       205 ~~-~~~tG~~i~vdgG~  220 (223)
T 3uce_A          205 QN-SYMTGTVIDVDGGA  220 (223)
T ss_dssp             HC-TTCCSCEEEESTTG
T ss_pred             cC-CCCCCcEEEecCCe
Confidence            74 34578999998874

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.54  E-value=3.7e-13  Score=128.57  Aligned_cols=211  Identities=13%  Similarity=0.052  Sum_probs=136.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||++.||+.+++.|+++|++|+++.|+.+.++++......       ...++..+.+|++|++++.++++  
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~-------~g~~~~~~~~Dvt~~~~v~~~~~~~   78 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-------MGKEVLGVKADVSKKKDVEEFVRRT   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998776555432211       02345689999999998887663  


Q ss_pred             -----CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 -----NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                           +.|++||+||.... .+           .+++|+.++..+.+++    ++.+-.+||.+||.....+.     ..
T Consensus        79 ~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~-----~~  153 (254)
T 4fn4_A           79 FETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG-----FA  153 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS-----SS
T ss_pred             HHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC-----CC
Confidence                 68999999996532 22           5567777777776655    44567799999887632111     11


Q ss_pred             CCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc---eEE---ecccccCCCCCcccHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN---VVV---SAEASVDANDYKVAKSQI  209 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~---i~~---~~~~~~~~~~~~i~v~DV  209 (427)
                      ...|.....      +...+.    ..+...|+++..|-||++..........   ...   .....+..  -+-..+||
T Consensus       154 ~~~Y~asKa------al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--R~g~pedi  225 (254)
T 4fn4_A          154 GAPYTVAKH------GLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS--RLAEPEDI  225 (254)
T ss_dssp             CHHHHHHHH------HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC--CCBCHHHH
T ss_pred             ChHHHHHHH------HHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC--CCcCHHHH
Confidence            122222111      122222    3344679999999999665422111000   000   00001111  25689999


Q ss_pred             HHHHHHHhcCcccc-cCcEEEEecC
Q 044905          210 ASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       210 A~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      |.+++.++++...+ .|..+.+-++
T Consensus       226 A~~v~fLaSd~a~~iTG~~i~VDGG  250 (254)
T 4fn4_A          226 ANVIVFLASDEASFVNGDAVVVDGG  250 (254)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhCchhcCCcCCEEEeCCC
Confidence            99999998754333 6788888776

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.53  E-value=2.7e-14  Score=136.79  Aligned_cols=209  Identities=13%  Similarity=0.080  Sum_probs=134.6

Q ss_pred             CCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ..++|+||||  +|+||+++++.|+++|++|++++|+.... +.+....          ..++.++.+|++|.+++.+++
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc----------CCCceEEEccCCCHHHHHHHH
Confidence            4578999999  99999999999999999999999987642 3332110          124568999999999988877


Q ss_pred             c----------CcCEEEEccCCCC-----CCC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEeccccccc
Q 044905           80 G----------NAGKVVVTIGPTE-----DGP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAA  131 (427)
Q Consensus        80 ~----------g~d~Vi~~ag~~~-----~~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~  131 (427)
                      +          ++|++||++|...     ..+           .+++|+.++.++++++...-  -.+||++||.+.++ 
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-  154 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-  154 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-
T ss_pred             HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-
Confidence            5          7999999999754     111           45678888889999886531  24899998765211 


Q ss_pred             ccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-----cc-eE-----Eecccc
Q 044905          132 STYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-----YN-VV-----VSAEAS  196 (427)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-----~~-i~-----~~~~~~  196 (427)
                              .+.+  ..|+.+| .+.+.+.+.+    ...|+++..|+||+++.......     .. ..     ......
T Consensus       155 --------~~~~--~~Y~asK-aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (269)
T 2h7i_A          155 --------MPAY--NWMTVAK-SALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD  223 (269)
T ss_dssp             --------CTTT--HHHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHH
T ss_pred             --------cCch--HHHHHHH-HHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhh
Confidence                    1111  1222222 2234444433    35699999999997654210000     00 00     000000


Q ss_pred             cCCCCC--cccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          197 VDANDY--KVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       197 ~~~~~~--~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ...+..  +.+.+|||++++.+++.... ..|..+.+.++
T Consensus       224 ~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             HHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             ccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence            001112  56889999999999875433 35778888776

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.52  E-value=4.1e-14  Score=139.85  Aligned_cols=165  Identities=16%  Similarity=0.199  Sum_probs=111.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      .++|+||||||+||++|++.|+++|++|+++.|+......+........-. .....++.++.+|++|.+++.++++.  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-ACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-TCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc-cCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            468999999999999999999999999988887654322211110000000 00013567899999999999998874  


Q ss_pred             ---cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCCcc
Q 044905           82 ---AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        82 ---~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                         +|+|||++|....++           .+++|+.++.++++++    ++.+..+||++||.+.+.+.     ..    
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~-----~~----  151 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-----PF----  151 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----TT----
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----CC----
Confidence               899999999754322           4568888999998885    45678899999987632211     01    


Q ss_pred             chhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCCC
Q 044905          144 FNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTED  180 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~~  180 (427)
                       ...|+.+| .+.+.+.+.+.    ..|+++++|+||++..
T Consensus       152 -~~~Y~aSK-~a~~~~~~~la~el~~~gI~v~~v~PG~v~T  190 (327)
T 1jtv_A          152 -NDVYCASK-FALEGLCESLAVLLLPFGVHLSLIECGPVHT  190 (327)
T ss_dssp             -CHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             -ChHHHHHH-HHHHHHHHHHHHHhhhcCcEEEEEEeCcccC
Confidence             12333332 33455554443    4789999999996543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.51  E-value=1.5e-13  Score=129.79  Aligned_cols=204  Identities=11%  Similarity=0.034  Sum_probs=126.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-e--cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAG-V--PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK---   77 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al-~--R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~---   77 (427)
                      +++++||||+|+||+++++.|+++|++|+++ .  |+.+..+.+.... .          ...+.  |..+.+.+.+   
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~----------~~~~~--~~~~v~~~~~~~~   67 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P----------GTIAL--AEQKPERLVDATL   67 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T----------TEEEC--CCCCGGGHHHHHG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C----------CCccc--CHHHHHHHHHHHH
Confidence            3689999999999999999999999999999 6  9876655443221 0          00111  5544433332   


Q ss_pred             -HhcCcCEEEEccCCCCC---CC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCC
Q 044905           78 -AIGNAGKVVVTIGPTED---GP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        78 -al~g~d~Vi~~ag~~~~---~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                       .+.++|++||++|....   .+           .+++|+.++.++++++.    +.+..+||++||...+.+.     .
T Consensus        68 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----~  142 (244)
T 1zmo_A           68 QHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----A  142 (244)
T ss_dssp             GGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----T
T ss_pred             HHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----C
Confidence             23478999999996543   22           45677888888887774    4567899999987632211     1


Q ss_pred             CCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCC---CCcc--ceEEe-cc-cccCCCCCcccHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSP---ESSY--NVVVS-AE-ASVDANDYKVAKS  207 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~---~~~~--~i~~~-~~-~~~~~~~~~i~v~  207 (427)
                      +...     |+.+| .+.+.+.+.+    ...|++++.|+||++.....   ....  ..... .. ..+..  .+.+.+
T Consensus       143 ~~~~-----Y~asK-~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pe  214 (244)
T 1zmo_A          143 YNPL-----YGPAR-AATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLG--RLGRPD  214 (244)
T ss_dssp             TCTT-----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTC--SCBCHH
T ss_pred             CchH-----HHHHH-HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCC--CCcCHH
Confidence            1122     22222 2244444433    35689999999997654321   1000  00000 00 01111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |+|++++.+++.... ..|..+.+.++
T Consensus       215 ~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          215 EMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             HHHHHHHHHcCccccCccCCEEEeCCC
Confidence            999999999875433 35788888776

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.51  E-value=4.5e-14  Score=134.28  Aligned_cols=210  Identities=10%  Similarity=0.056  Sum_probs=132.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLR---EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~---~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +..++++||||+|+||+++++.|++   +|++|++++|+.+....+......     .....++.++.+|++|.+++.++
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dv~~~~~v~~~   78 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA-----QQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHH-----HCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHh-----hCCCCeEEEEecCCCCHHHHHHH
Confidence            4567899999999999999999999   899999999998765544322110     00013456899999999988876


Q ss_pred             hc---------CcC--EEEEccCCCCC--C------C------CccccHHHHHHHHHHHHHc------CCCeEEEEeccc
Q 044905           79 IG---------NAG--KVVVTIGPTED--G------P------TSEVSTSDAFQVIQAAQLA------GVGHVAIIYDGN  127 (427)
Q Consensus        79 l~---------g~d--~Vi~~ag~~~~--~------~------~~~vn~~~~~~ll~Aa~~~------gVk~~V~vSSs~  127 (427)
                      ++         ..|  ++||++|....  .      .      .+++|+.++.++++++...      +..+||++||..
T Consensus        79 ~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~  158 (259)
T 1oaa_A           79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC  158 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred             HHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch
Confidence            63         358  99999996431  1      1      4567888999999988654      335799999876


Q ss_pred             ccccccCCCCCCCCccchhhhhccccccHHHHHHHHh-c-CCCeEEEEeCCCCCCCCCCCccceEEec-------ccccC
Q 044905          128 TTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI-E-TDVSYTFIKTSLTEDFSPESSYNVVVSA-------EASVD  198 (427)
Q Consensus       128 v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~-~gl~~tilRPG~~~~~~~~~~~~i~~~~-------~~~~~  198 (427)
                      .+.+        .+.  ...|+.+| .+.+.+.+.+. + .++++..|.||++...............       ...+.
T Consensus       159 ~~~~--------~~~--~~~Y~asK-aa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~  227 (259)
T 1oaa_A          159 ALQP--------YKG--WGLYCAGK-AARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD  227 (259)
T ss_dssp             GTSC--------CTT--CHHHHHHH-HHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT
T ss_pred             hcCC--------CCC--ccHHHHHH-HHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhc
Confidence            4221        111  12333332 33555555554 2 2489999999976542110000000000       00011


Q ss_pred             CCCCcccHHHHHHHHHHHhcCcccccCcEEE
Q 044905          199 ANDYKVAKSQIASLVADVFSNTAVAENKVVK  229 (427)
Q Consensus       199 ~~~~~i~v~DVA~~v~~al~~~~~~~g~~~n  229 (427)
                      .  .+.+.+|+|+.++.+++...-..|..++
T Consensus       228 ~--~~~~p~dvA~~v~~l~~~~~~itG~~i~  256 (259)
T 1oaa_A          228 G--ALVDCGTSAQKLLGLLQKDTFQSGAHVD  256 (259)
T ss_dssp             T--CSBCHHHHHHHHHHHHHHCCSCTTEEEE
T ss_pred             C--CcCCHHHHHHHHHHHHhhccccCCcEEe
Confidence            1  3679999999999888632222455544

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.51  E-value=1.1e-12  Score=125.65  Aligned_cols=213  Identities=13%  Similarity=0.035  Sum_probs=133.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +.++++||||++.||+.+++.|+++|+.|++..|+.+....+.....        ...+...+.+|++|.+++.+++   
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~--------~~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQ--------RQPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHH--------HCTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHh--------cCCCEEEEEeecCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998875433221111        1234568999999988877665   


Q ss_pred             ----cCcCEEEEccCCCCCCC----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCCc
Q 044905           80 ----GNAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                          .+.|++||+||.....+          .+++|+.++..+.+++..   .+-.+||.+||.....+.     .....
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~-----~~~~~  152 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ-----GNTSG  152 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC-----SSCHH
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC-----CCchH
Confidence                36899999999754322          456777777777766542   123689999987632111     11122


Q ss_pred             cchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc-ceEEecc----cccCCCC--CcccHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY-NVVVSAE----ASVDAND--YKVAKSQIAS  211 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~-~i~~~~~----~~~~~~~--~~i~v~DVA~  211 (427)
                      |.     -+| -+...+.    ..+...|+++..|.||++......... .......    .....++  -+...+|||.
T Consensus       153 Y~-----asK-aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~  226 (258)
T 4gkb_A          153 YC-----ASK-GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIAD  226 (258)
T ss_dssp             HH-----HHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHH
T ss_pred             HH-----HHH-HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHH
Confidence            22     221 1122232    334467999999999966542211100 0000000    0011111  2568999999


Q ss_pred             HHHHHhcCccc-ccCcEEEEecCC
Q 044905          212 LVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       212 ~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +++.++++... ..|..+.+-++.
T Consensus       227 ~v~fLaS~~a~~iTG~~i~VDGG~  250 (258)
T 4gkb_A          227 TAVFLLSPRASHTTGEWLFVDGGY  250 (258)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhCchhcCccCCeEEECCCc
Confidence            99999875433 368888888774

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.49  E-value=7.4e-13  Score=127.72  Aligned_cols=206  Identities=11%  Similarity=0.060  Sum_probs=134.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.+.++||||++.||+.+++.|+++|++|++..|+.+.++.+....          ..+...+.+|++|.+++.++++  
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----------g~~~~~~~~Dv~~~~~v~~~~~~~   97 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----------GGGAVGIQADSANLAELDRLYEKV   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------CCCeEEEEecCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999987765543321          1234578999999888877654  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           ++|++|++||.....+           .+++|+.++..+++++...  .-.++|.+||.....+     ......
T Consensus        98 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~-----~~~~~~  172 (273)
T 4fgs_A           98 KAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTG-----TPAFSV  172 (273)
T ss_dssp             HHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSC-----CTTCHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccC-----CCCchH
Confidence                 6899999999765533           5677888888888877543  1247888887753211     111122


Q ss_pred             cchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEec------------ccccCCCCCcccH
Q 044905          143 FFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSA------------EASVDANDYKVAK  206 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~------------~~~~~~~~~~i~v  206 (427)
                      |.     -+| -+...+.+    .+...|+++-.|.||++.....   ..+....            ...+..  -+-..
T Consensus       173 Y~-----asK-aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~---~~~~~~~~~~~~~~~~~~~~~~Plg--R~g~p  241 (273)
T 4fgs_A          173 YA-----ASK-AALRSFARNWILDLKDRGIRINTLSPGPTETTGL---VELAGKDPVQQQGLLNALAAQVPMG--RVGRA  241 (273)
T ss_dssp             HH-----HHH-HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC------------CHHHHHHHHHHHHHHSTTS--SCBCH
T ss_pred             HH-----HHH-HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhH---HHhhccCchhhHHHHHHHHhcCCCC--CCcCH
Confidence            22     221 11233333    3346789999999997654211   0110000            001111  25689


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +|||.+++.++++... ..|..+.+-++.
T Consensus       242 eeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          242 EEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            9999999999875433 367888887763

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.48  E-value=2.7e-13  Score=129.61  Aligned_cols=210  Identities=12%  Similarity=0.052  Sum_probs=136.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||++.||+.+++.|+++|++|++..|+.+.+++.......       ...+...+.+|++|++++.++++   
T Consensus         9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~-------~g~~~~~~~~Dv~~~~~v~~~~~~~~   81 (255)
T 4g81_D            9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-------KGYDAHGVAFDVTDELAIEAAFSKLD   81 (255)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-------TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998766544332111       02345678899999988887664   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH-----cCCCeEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL-----AGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~-----~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          +.|++||+||.....+           .+++|+.++..+.+++..     .+-.+||.+||.....+     ....
T Consensus        82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~-----~~~~  156 (255)
T 4g81_D           82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA-----RPTV  156 (255)
T ss_dssp             HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB-----CTTC
T ss_pred             HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC-----CCCc
Confidence                5899999999876544           456777788777776532     34578999988763211     1111


Q ss_pred             CccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc---ceEE-ecccccCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY---NVVV-SAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~---~i~~-~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      ..|..     +| -+...+.    ..+...|+++-.|-||++.........   .... .....+..  -+...+|||.+
T Consensus       157 ~~Y~a-----sK-aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~--R~g~pediA~~  228 (255)
T 4g81_D          157 APYTA-----AK-GGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ--RWGRPEELIGT  228 (255)
T ss_dssp             HHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC--SCBCGGGGHHH
T ss_pred             hhHHH-----HH-HHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC--CCcCHHHHHHH
Confidence            22222     11 1122222    334467999999999976542111000   0000 00011111  25688999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecC
Q 044905          213 VADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++.++++... ..|..+.+-++
T Consensus       229 v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          229 AIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhCCCcCCEEEECCC
Confidence            9998875433 36788888776

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.47  E-value=2.9e-13  Score=128.22  Aligned_cols=205  Identities=15%  Similarity=0.084  Sum_probs=132.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||++.||+.+++.|+++|++|++..|+.+.+....             ..++..+.+|++|++++.++++  
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~   76 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-------------HPRIRREELDITDSQRLQRLFEAL   76 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-------------CTTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-------------cCCeEEEEecCCCHHHHHHHHHhc
Confidence            3578999999999999999999999999999999976543211             2345689999999998887764  


Q ss_pred             -CcCEEEEccCCCCCCC---------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCCCCccchhh
Q 044905           81 -NAGKVVVTIGPTEDGP---------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDGISSFFNNL  147 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~~---------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~  147 (427)
                       +.|++|||||......         .+++|+.++..+.+++...   +-.+||.+||.....+.     .....|.   
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~-----~~~~~Y~---  148 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS-----ADRPAYS---  148 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC-----SSCHHHH---
T ss_pred             CCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC-----CCCHHHH---
Confidence             6899999999764311         4567777877777765431   23689999987632111     1112222   


Q ss_pred             hhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc-eEE-e--cccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          148 FSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN-VVV-S--AEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       148 ~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~-i~~-~--~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                        -+| -....+.    ..+...|+++-.|-||+++......... ... .  ....+..  -+-..+|||.+++.++++
T Consensus       149 --asK-aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg--R~g~peeiA~~v~fLaSd  223 (242)
T 4b79_A          149 --ASK-GAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA--RWGEAPEVASAAAFLCGP  223 (242)
T ss_dssp             --HHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC--SCBCHHHHHHHHHHHTSG
T ss_pred             --HHH-HHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCc
Confidence              221 1122222    2344679999999999765432111000 000 0  0011111  256899999999999875


Q ss_pred             ccc-ccCcEEEEecC
Q 044905          220 TAV-AENKVVKVFTD  233 (427)
Q Consensus       220 ~~~-~~g~~~nI~~~  233 (427)
                      ... ..|..+.+-++
T Consensus       224 ~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          224 GASFVTGAVLAVDGG  238 (242)
T ss_dssp             GGTTCCSCEEEESTT
T ss_pred             hhcCccCceEEECcc
Confidence            433 36788888776

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.47  E-value=1.9e-12  Score=123.46  Aligned_cols=213  Identities=12%  Similarity=0.105  Sum_probs=132.0

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .+.++++||||+|  .||..+++.|+++|++|++..|+....+++.....+      ....+..++.+|++|.+++.+++
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~   77 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ------LNQPEAHLYQIDVQSDEEVINGF   77 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGG------GTCSSCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh------cCCCcEEEEEccCCCHHHHHHHH
Confidence            4567899999987  899999999999999999999998776665443222      11235668999999998887765


Q ss_pred             c-------CcCEEEEccCCCCCC----C-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCC
Q 044905           80 G-------NAGKVVVTIGPTEDG----P-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~~----~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~  135 (427)
                      +       ++|++||++|.....    .           ..++|..+...+.+++...  .-.+||.+||.+...+    
T Consensus        78 ~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~----  153 (256)
T 4fs3_A           78 EQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA----  153 (256)
T ss_dssp             HHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC----
T ss_pred             HHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC----
Confidence            3       689999999965431    1           1234444444555555432  2357999987762111    


Q ss_pred             CCCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~  207 (427)
                       ......     |+-+| -+...+.+    .+...|+++..|.||++...........  ...  ....+..  -+...+
T Consensus       154 -~~~~~~-----Y~asK-aal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~--R~g~pe  224 (256)
T 4fs3_A          154 -VQNYNV-----MGVAK-ASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK--RNVDQV  224 (256)
T ss_dssp             -CTTTHH-----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS--SCCCHH
T ss_pred             -cccchh-----hHHHH-HHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC--CCcCHH
Confidence             111122     22221 12233333    3446799999999997654221111100  000  0011111  256899


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |||.+++.++++... ..|..+.+-++
T Consensus       225 evA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          225 EVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhCchhcCccCCEEEECcC
Confidence            999999999875433 36788888776

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.43  E-value=1e-12  Score=136.98  Aligned_cols=194  Identities=14%  Similarity=0.157  Sum_probs=130.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcch---HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGA---AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~---~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ++|+||||+|+||.++++.|+++|+ +|+++.|+...   ..++......       ...++.++.+|++|.+++.++++
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-------~g~~v~~~~~Dvtd~~~v~~~~~  312 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-------LGVRVTIAACDAADREALAALLA  312 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-------cCCeEEEEEccCCCHHHHHHHHH
Confidence            7899999999999999999999998 78888887532   2333221111       02356789999999999999886


Q ss_pred             ------CcCEEEEccCCC-CCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 ------NAGKVVVTIGPT-EDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 ------g~d~Vi~~ag~~-~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                            .+|+|||++|.. ...+           .+.+|+.++.++.+++...+..+||++||.+...+..     +.. 
T Consensus       313 ~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~-----g~~-  386 (496)
T 3mje_A          313 ELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG-----GQP-  386 (496)
T ss_dssp             TCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT-----TCH-
T ss_pred             HHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC-----CcH-
Confidence                  479999999976 3322           5678999999999999988899999999876322211     112 


Q ss_pred             cchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                          .|+..+ ...+.+.+.++..|++++.|.||++.+...  ....... ......++..++.++++.++..++..
T Consensus       387 ----~YaAaK-a~ldala~~~~~~Gi~v~sV~pG~w~~~gm--~~~~~~~-~~l~~~g~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          387 ----GYAAAN-AYLDALAEHRRSLGLTASSVAWGTWGEVGM--ATDPEVH-DRLVRQGVLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             ----HHHHHH-HHHHHHHHHHHHTTCCCEEEEECEESSSCC--------C-HHHHHTTEEEECHHHHHHHHHHHHHH
T ss_pred             ----HHHHHH-HHHHHHHHHHHhcCCeEEEEECCcccCCcc--ccChHHH-HHHHhcCCCCCCHHHHHHHHHHHHcC
Confidence                222221 124455555567899999999996543111  0000000 00011223467899999999988864

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.41  E-value=1.3e-12  Score=137.18  Aligned_cols=224  Identities=13%  Similarity=0.094  Sum_probs=139.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEE-ecCcc-------------hHHHHHHHHhhhhhhhhhhhccceEEEe
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFS-VRAG-VPELG-------------AAQELARLAASYKILSKEELKRLNAVES   67 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al-~R~~~-------------~~~~l~~~~~~~~~~~~~~~~rl~vv~g   67 (427)
                      +.++|+||||+|+||.++++.|+++|+. |+++ .|+..             ....+......       ...++.++.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~g~~v~~~~~  322 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-------LGATATVVTC  322 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH-------HTCEEEEEEC
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-------cCCEEEEEEC
Confidence            3568999999999999999999999987 5555 78742             12222111100       0235678999


Q ss_pred             cCCCHHHHHHHhcC------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcC-----CCeEEEEec
Q 044905           68 NFDSAESIAKAIGN------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAG-----VGHVAIIYD  125 (427)
Q Consensus        68 Dl~D~~sl~~al~g------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~g-----Vk~~V~vSS  125 (427)
                      |++|.+++.++++.      +|+|||++|....+.           .+.+|+.++.++.+++....     ..+||++||
T Consensus       323 Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS  402 (525)
T 3qp9_A          323 DLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS  402 (525)
T ss_dssp             CTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence            99999999998864      699999999765432           45788899999999998776     789999998


Q ss_pred             ccccccccCCCCCCCCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCccc
Q 044905          126 GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVA  205 (427)
Q Consensus       126 s~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~  205 (427)
                      .+...+..     +..     .|+..+ ...+.+...+...|++++.|.||+++...   ....... ......++..++
T Consensus       403 ~a~~~g~~-----g~~-----~YaaaK-a~l~~lA~~~~~~gi~v~sI~pG~~~tgm---~~~~~~~-~~~~~~g~~~l~  467 (525)
T 3qp9_A          403 VAAIWGGA-----GQG-----AYAAGT-AFLDALAGQHRADGPTVTSVAWSPWEGSR---VTEGATG-ERLRRLGLRPLA  467 (525)
T ss_dssp             GGGTTCCT-----TCH-----HHHHHH-HHHHHHHTSCCSSCCEEEEEEECCBTTSG---GGSSHHH-HHHHHTTBCCBC
T ss_pred             HHHcCCCC-----CCH-----HHHHHH-HHHHHHHHHHHhCCCCEEEEECCcccccc---ccchhhH-HHHHhcCCCCCC
Confidence            76322211     111     222221 11333333334678999999999774321   1000000 000112335789


Q ss_pred             HHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccchhhhH
Q 044905          206 KSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGRRAAYA  258 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~~~~~~  258 (427)
                      .+++++++..++....    ..+.+..      ..|..+...+........+.
T Consensus       468 pee~a~~l~~~l~~~~----~~v~v~~------~dw~~~~~~~~~~~~~~l~~  510 (525)
T 3qp9_A          468 PATALTALDTALGHGD----TAVTIAD------VDWSSFAPGFTTARPGTLLA  510 (525)
T ss_dssp             HHHHHHHHHHHHHHTC----SEEEECC------BCHHHHHHHHHSSSCCCTTT
T ss_pred             HHHHHHHHHHHHhCCC----CeEEEEe------CCHHHHHhhccccCCchHHH
Confidence            9999999999987431    2222322      34566666654433333333

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.40  E-value=1e-12  Score=140.55  Aligned_cols=201  Identities=15%  Similarity=0.166  Sum_probs=123.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec---------CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP---------ELGAAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R---------~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      ++.++++||||+|+||+++++.|+++|++|++++|         +...++.+......          ....+.+|+.|.
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~----------~~~~~~~D~~d~   86 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK----------AGGEAVADYNSV   86 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH----------TTCCEEECCCCG
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH----------hCCeEEEEeCCH
Confidence            56678999999999999999999999999999987         33333333221111          001345899998


Q ss_pred             HHHHHHhc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccc
Q 044905           73 ESIAKAIG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTA  130 (427)
Q Consensus        73 ~sl~~al~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~  130 (427)
                      +++.++++       .+|++|||||.....+           .+++|+.++.++++++    ++.+..+||++||.+...
T Consensus        87 ~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~  166 (613)
T 3oml_A           87 IDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIY  166 (613)
T ss_dssp             GGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence            87777665       5899999999765422           5578888999888887    456677999999876321


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccH
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v  206 (427)
                      +..     +..     .|+.+| .+.+.+.+.+    ...|+.+..|.||.......    .. ...  ..   ...+..
T Consensus       167 ~~~-----~~~-----~Y~asK-aal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~----~~-~~~--~~---~~~~~p  225 (613)
T 3oml_A          167 GNF-----GQV-----NYTAAK-MGLIGLANTVAIEGARNNVLCNVIVPTAASRMTE----GI-LPD--IL---FNELKP  225 (613)
T ss_dssp             CCT-----TCH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEEC------C----CC-CCH--HH---HTTCCG
T ss_pred             CCC-----CCh-----HHHHHH-HHHHHHHHHHHHHhCccCeEEEEEECCCCChhhh----hc-cch--hh---hhcCCH
Confidence            111     111     222222 2234443333    35689999999996433211    10 000  00   124588


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      +|||.+++.+++......|..+++.++
T Consensus       226 edvA~~v~~L~s~~~~~tG~~i~vdGG  252 (613)
T 3oml_A          226 KLIAPVVAYLCHESCEDNGSYIESAAG  252 (613)
T ss_dssp             GGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHhcCCCcCCCceEEEECCC
Confidence            999999999887542246777877643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.39  E-value=3.4e-12  Score=122.36  Aligned_cols=202  Identities=13%  Similarity=0.108  Sum_probs=128.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||++.||+++++.|+++|++|++..|+....  +               .....+.+|++|.+++..+++   
T Consensus        11 GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~---------------~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A           11 GKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--L---------------PEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             TCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--S---------------CTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--C---------------CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999976421  0               011278999999888777653   


Q ss_pred             ----CcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ----NAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                          +.|++||++|....  ++           .+++|+.++.++.+++    ++.+-.+||++||.....+    ....
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~----~~~~  149 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP----LPES  149 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC----CTTT
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC----CCCc
Confidence                68999999986432  11           4567777777776655    4456778999987752111    0011


Q ss_pred             CCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc-------ceEE--------e-cccccCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY-------NVVV--------S-AEASVDA  199 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~-------~i~~--------~-~~~~~~~  199 (427)
                      ..     +|+-+| -+...+.    ..+...|+++..|.||+++........       ....        . ....+..
T Consensus       150 ~~-----~Y~asK-aal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg  223 (261)
T 4h15_A          150 TT-----AYAAAK-AALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG  223 (261)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS
T ss_pred             cH-----HHHHHH-HHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC
Confidence            11     222111 1123333    334467999999999977542110000       0000        0 0001111


Q ss_pred             CCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          200 NDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                        -+...+|||++++.++++... ..|..+.+-++-
T Consensus       224 --R~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          224 --RPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             --SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence              256899999999999874433 368888888774

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.36  E-value=4.7e-12  Score=120.23  Aligned_cols=207  Identities=16%  Similarity=0.089  Sum_probs=134.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.++++||||++.||+.+++.|+++|++|++..|+...  .+.+...+           .+...+.+|++|++++..+++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g-----------~~~~~~~~Dv~d~~~v~~~~~   76 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDG-----------GNASALLIDFADPLAAKDSFT   76 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT-----------CCEEEEECCTTSTTTTTTSST
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhC-----------CcEEEEEccCCCHHHHHHHHH
Confidence            35789999999999999999999999999999998642  22232222           344589999999988877664


Q ss_pred             --CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcC-CCeEEEEecccccccccCCCCCCCCc
Q 044905           81 --NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAG-VGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        +.|++|||||.....+           .+++|+.++..+.+++.    +.| -.+||.+||.....+.     .....
T Consensus        77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~-----~~~~~  151 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG-----IRVPS  151 (247)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----SSCHH
T ss_pred             hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC-----CCChH
Confidence              5899999999766543           56778888888777643    344 5689999987632111     11222


Q ss_pred             cchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc--ceEEe--cccccCCCCCcccHHHHHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY--NVVVS--AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~--~i~~~--~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      |.....      ....+-    ..+...|+++-.|-||++.........  .-...  ....+..  -+-..+|||.+++
T Consensus       152 Y~asKa------av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg--R~g~peeiA~~v~  223 (247)
T 4hp8_A          152 YTAAKH------GVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG--RWGHSEDIAGAAV  223 (247)
T ss_dssp             HHHHHH------HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS--SCBCTHHHHHHHH
T ss_pred             HHHHHH------HHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC--CCcCHHHHHHHHH
Confidence            222111      122222    334477999999999977542211000  00000  0011111  2557899999999


Q ss_pred             HHhcCcccc-cCcEEEEecC
Q 044905          215 DVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~~~-~g~~~nI~~~  233 (427)
                      .++++...+ .|..+.+-++
T Consensus       224 fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          224 FLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             HHTSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhcCCcCCeEEECcc
Confidence            998754333 6788888776

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.35  E-value=2.7e-13  Score=133.95  Aligned_cols=163  Identities=12%  Similarity=0.068  Sum_probs=104.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAES   74 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s   74 (427)
                      +|+|+||||+||||++++..|+.+|+       +|++++++..  +...... ...        ...+.++ +|+.+.+.
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~-dl~--------~~~~~~~-~di~~~~~   73 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVM-ELE--------DCAFPLL-AGLEATDD   73 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHH-HHH--------TTTCTTE-EEEEEESC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhh-hhh--------ccccccc-CCeEeccC
Confidence            46899999999999999999999996       8999988652  1111100 000        0011233 67776666


Q ss_pred             HHHHhcCcCEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcC-CC-eEEEEecccccccccCC-CCC-CCCccch
Q 044905           75 IAKAIGNAGKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAG-VG-HVAIIYDGNTTAASTYN-VLD-GISSFFN  145 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~g-Vk-~~V~vSSs~v~~~~~~~-~~~-~~~~~~~  145 (427)
                      +.++++++|+|||+||.... +    ...+.|+.++.++++++++++ .+ +++++|+.. ....... ... +++  ..
T Consensus        74 ~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~-~~~~~~~~~~~~~~~--p~  150 (327)
T 1y7t_A           74 PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPA-NTNALIAYKNAPGLN--PR  150 (327)
T ss_dssp             HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH-HHHHHHHHHTCTTSC--GG
T ss_pred             hHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCch-hhhHHHHHHHcCCCC--hh
Confidence            78889999999999996542 1    155789999999999999986 65 555555432 1000000 001 111  12


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCC
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTED  180 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~  180 (427)
                      +.|+..+ +..|.+...+. ..|++++++||+ .+++
T Consensus       151 ~~yg~tk-l~~er~~~~~a~~~g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          151 NFTAMTR-LDHNRAKAQLAKKTGTGVDRIRRMTVWGN  186 (327)
T ss_dssp             GEEECCH-HHHHHHHHHHHHHHTCCGGGEECCEEEBC
T ss_pred             heeccch-HHHHHHHHHHHHHhCcChhheeeeEEEcC
Confidence            3355443 56777766655 468999999985 3443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.27  E-value=1.3e-11  Score=102.21  Aligned_cols=94  Identities=24%  Similarity=0.260  Sum_probs=78.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++++|+|+|+ |++|+++++.|++.| ++|++++|++++...+...             ++.++.+|+.|.+.+.+++.+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~-------------~~~~~~~d~~~~~~~~~~~~~   69 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRM-------------GVATKQVDAKDEAGLAKALGG   69 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTT-------------TCEEEECCTTCHHHHHHHTTT
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhC-------------CCcEEEecCCCHHHHHHHHcC
Confidence            4568999999 999999999999999 9999999998776655422             234889999999999999999


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||++++..           ...+++++|.+.|+++|.
T Consensus        70 ~d~vi~~~~~~-----------~~~~~~~~~~~~g~~~~~   98 (118)
T 3ic5_A           70 FDAVISAAPFF-----------LTPIIAKAAKAAGAHYFD   98 (118)
T ss_dssp             CSEEEECSCGG-----------GHHHHHHHHHHTTCEEEC
T ss_pred             CCEEEECCCch-----------hhHHHHHHHHHhCCCEEE
Confidence            99999999632           236789999999987654

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.23  E-value=5.4e-11  Score=116.64  Aligned_cols=220  Identities=12%  Similarity=0.052  Sum_probs=113.2

Q ss_pred             CCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCc-----------chHHHHHHH--Hh---hhhhhhhhh--hccc
Q 044905            3 DSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPEL-----------GAAQELARL--AA---SYKILSKEE--LKRL   62 (427)
Q Consensus         3 ~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~-----------~~~~~l~~~--~~---~~~~~~~~~--~~rl   62 (427)
                      ..++++||||  +|+||+++++.|+++|++|+++.|++           .++..+...  +.   ....+....  ....
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            3468999999  89999999999999999999998753           111111000  00   000000000  0001


Q ss_pred             eEEEec------------CCC--------HHHHHHH-------hcCcCEEEEccCCCC--CCC-----------CccccH
Q 044905           63 NAVESN------------FDS--------AESIAKA-------IGNAGKVVVTIGPTE--DGP-----------TSEVST  102 (427)
Q Consensus        63 ~vv~gD------------l~D--------~~sl~~a-------l~g~d~Vi~~ag~~~--~~~-----------~~~vn~  102 (427)
                      .++.+|            ++|        .+++.++       +.++|++||++|...  ..+           .+++|+
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            234443            222        1233332       347899999998542  111           456788


Q ss_pred             HHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hc-CCCeEEEEeC
Q 044905          103 SDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IE-TDVSYTFIKT  175 (427)
Q Consensus       103 ~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~-~gl~~tilRP  175 (427)
                      .++.++++++...  .-.+||++||.+...+.     ....    ..|+.+| .+.+.+.+.+    .. .|+++..|+|
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~----~~Y~asK-aal~~l~~~la~el~~~~gIrvn~v~P  237 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIASEKVI-----PGYG----GGMSSAK-AALESDCRTLAFEAGRARAVRVNCISA  237 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEecccccccc-----Cccc----hhhHHHH-HHHHHHHHHHHHHhccccCeeEEEEee
Confidence            8889999988654  11589999887632111     0110    1122222 2233333333    22 6899999999


Q ss_pred             CCCCCCCCCCccc----eEEec------ccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          176 SLTEDFSPESSYN----VVVSA------EASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       176 G~~~~~~~~~~~~----i~~~~------~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++..........    -....      ...+..  .+.+.+|||++++.+++.... ..|..+.+.++.
T Consensus       238 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          238 GPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQ--KELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             CCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCccChhhhhcccccchhhHHHHHHHHhccCCCC--CCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            9665422110000    00000      000111  256899999999999874332 367888888774

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.21  E-value=1.5e-10  Score=112.13  Aligned_cols=220  Identities=11%  Similarity=0.081  Sum_probs=121.3

Q ss_pred             CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEecCcchHH---HHHHHHh-hhhhhhhhhh-ccceEEEec-------
Q 044905            3 DSGTVFVAGAT--GQAGVRIAQTLLREGFSVRAGVPELGAAQ---ELARLAA-SYKILSKEEL-KRLNAVESN-------   68 (427)
Q Consensus         3 ~~~kIlItGAT--G~iG~~lv~~LL~~G~~V~al~R~~~~~~---~l~~~~~-~~~~~~~~~~-~rl~vv~gD-------   68 (427)
                      ..++++||||+  |+||+++++.|+++|++|++++|++....   ....... ...-+..... .....+.+|       
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence            45689999999  99999999999999999999987632100   0000000 0000000000 001223332       


Q ss_pred             -CC----C--------HHHHHHH-------hcCcCEEEEccCCCC--CCC-----------CccccHHHHHHHHHHHHHc
Q 044905           69 -FD----S--------AESIAKA-------IGNAGKVVVTIGPTE--DGP-----------TSEVSTSDAFQVIQAAQLA  115 (427)
Q Consensus        69 -l~----D--------~~sl~~a-------l~g~d~Vi~~ag~~~--~~~-----------~~~vn~~~~~~ll~Aa~~~  115 (427)
                       +.    |        .+++.++       +.++|++||++|...  ..+           .+++|+.++.++++++...
T Consensus        87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  166 (297)
T 1d7o_A           87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence             22    1        2233332       347999999998532  111           4567888999999998754


Q ss_pred             --CCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh----c-CCCeEEEEeCCCCCCCCCCCcc-
Q 044905          116 --GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----E-TDVSYTFIKTSLTEDFSPESSY-  187 (427)
Q Consensus       116 --gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~-~gl~~tilRPG~~~~~~~~~~~-  187 (427)
                        .-.+||++||.+...+.     ....    ..|+.+| .+.+.+.+.+.    . .|+++..|+||++......... 
T Consensus       167 m~~~g~iv~isS~~~~~~~-----~~~~----~~Y~asK-aa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~  236 (297)
T 1d7o_A          167 MNPGGASISLTYIASERII-----PGYG----GGMSSAK-AALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             EEEEEEEEEEECGGGTSCC-----TTCT----TTHHHHH-HHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             hccCceEEEEeccccccCC-----CCcc----hHHHHHH-HHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc
Confidence              12589999887632111     1110    1222222 22444444332    2 6899999999966442211100 


Q ss_pred             -ceEEe--cccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          188 -NVVVS--AEASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       188 -~i~~~--~~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                       .-...  ....+..  .+.+.+|+|++++.+++.... ..|..+++.++.
T Consensus       237 ~~~~~~~~~~~~p~~--r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~  285 (297)
T 1d7o_A          237 IDTMIEYSYNNAPIQ--KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHHHHHSSSC--CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             cHHHHHHhhccCCCC--CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence             00000  0001111  367899999999998874323 367889988873

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.16  E-value=7e-11  Score=115.70  Aligned_cols=214  Identities=14%  Similarity=0.060  Sum_probs=120.3

Q ss_pred             CCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEecCcc-----------hHHHHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            3 DSGTVFVAGA--TGQAGVRIAQTLLREGFSVRAGVPELG-----------AAQELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         3 ~~~kIlItGA--TG~iG~~lv~~LL~~G~~V~al~R~~~-----------~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      ..++++||||  ||+||+++++.|+++|++|+++.|++.           ++..+.    .  +..........++.+|+
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~d~   81 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDR----K--LPDGSLIEFAGVYPLDA   81 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHH----B--CTTSCBCCCSCEEECCT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhh----h--hhccccccccccccccc
Confidence            3468999999  899999999999999999999988641           111110    0  00000000013444432


Q ss_pred             ------------CC--------HHHHHHH-------hcCcCEEEEccCCCC--CCC-----------CccccHHHHHHHH
Q 044905           70 ------------DS--------AESIAKA-------IGNAGKVVVTIGPTE--DGP-----------TSEVSTSDAFQVI  109 (427)
Q Consensus        70 ------------~D--------~~sl~~a-------l~g~d~Vi~~ag~~~--~~~-----------~~~vn~~~~~~ll  109 (427)
                                  +|        .+++..+       +.++|++||++|...  ..+           .+++|+.++.+++
T Consensus        82 ~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           82 AFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             TCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                        22        2233333       347999999998642  111           4567888888888


Q ss_pred             HHHHHcC--CCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHH----hc-CCCeEEEEeCCCCCCCC
Q 044905          110 QAAQLAG--VGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKV----IE-TDVSYTFIKTSLTEDFS  182 (427)
Q Consensus       110 ~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l----~~-~gl~~tilRPG~~~~~~  182 (427)
                      +++...-  -.+||++||.+...+.     ....    ..|+.+| .+.+.+.+.+    .. .|+++..|+||++....
T Consensus       162 ~~~~~~m~~~g~Iv~isS~~~~~~~-----~~~~----~~Y~asK-aal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  231 (315)
T 2o2s_A          162 QHFGPIMNEGGSAVTLSYLAAERVV-----PGYG----GGMSSAK-AALESDTRTLAWEAGQKYGVRVNAISAGPLKSRA  231 (315)
T ss_dssp             HHHSTTEEEEEEEEEEEEGGGTSCC-----TTCC----TTHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHH
T ss_pred             HHHHHHHhcCCEEEEEecccccccC-----CCcc----HHHHHHH-HHHHHHHHHHHHHhCcccCeEEEEEecccccchh
Confidence            8886431  1589999887632111     1111    1122222 2233333332    32 79999999999765421


Q ss_pred             CCCccc----eEEe------cccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          183 PESSYN----VVVS------AEASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       183 ~~~~~~----i~~~------~~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ......    -...      ....+..  .+.+.+|||++++.+++.... ..|..+.+.++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          232 ASAIGKSGEKSFIDYAIDYSYNNAPLR--RDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHHTTCSSSSCHHHHHHHHHHHHSSSC--CCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             hhhccccccchhHHHHHHHHhccCCCC--CCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            000000    0000      0001111  256899999999998874333 367888887773

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.15  E-value=5.5e-11  Score=117.29  Aligned_cols=165  Identities=9%  Similarity=0.070  Sum_probs=99.1

Q ss_pred             CCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcch-H-H-HHHHHHhhhhhhh--hhhhccceEEEecCCCH--H-
Q 044905            4 SGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGA-A-Q-ELARLAASYKILS--KEELKRLNAVESNFDSA--E-   73 (427)
Q Consensus         4 ~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~-~-~-~l~~~~~~~~~~~--~~~~~rl~vv~gDl~D~--~-   73 (427)
                      .++++||||++  .||.++++.|+++|++|++..|++.. + . ...........+.  ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            56899999875  99999999999999999988877521 0 0 0000000000000  00112356788888776  5 


Q ss_pred             -----------------HHHHHh-------cCcCEEEEccCCCC--CCC-----------CccccHHHHHHHHHHHHHcC
Q 044905           74 -----------------SIAKAI-------GNAGKVVVTIGPTE--DGP-----------TSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        74 -----------------sl~~al-------~g~d~Vi~~ag~~~--~~~-----------~~~vn~~~~~~ll~Aa~~~g  116 (427)
                                       ++.+++       ..+|++||++|...  ..+           .+++|+.++..+++++...-
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             555444       36899999999632  111           56788888888888876531


Q ss_pred             C--CeEEEEecccccccccCCCCCCCC-ccchhhhhccccccHHHHHHH----Hhc-CCCeEEEEeCCCCC
Q 044905          117 V--GHVAIIYDGNTTAASTYNVLDGIS-SFFNNLFSRNQPLTVPEFLQK----VIE-TDVSYTFIKTSLTE  179 (427)
Q Consensus       117 V--k~~V~vSSs~v~~~~~~~~~~~~~-~~~~~~~~k~~~l~~E~~l~~----l~~-~gl~~tilRPG~~~  179 (427)
                      .  .+||++||.....+     ..... .|.     .+| .+...+.+.    +.. .|+++..|.||++.
T Consensus       162 ~~~g~Iv~isS~~~~~~-----~~~~~~~Y~-----asK-aal~~~~~~la~el~~~~gI~vn~v~PG~v~  221 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKV-----VPGYGGGMS-----SAK-AALESDTRVLAYHLGRNYNIRINTISAGPLK  221 (329)
T ss_dssp             EEEEEEEEEECGGGTSC-----CTTCTTTHH-----HHH-HHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             hhCCeEEEEeCccccCC-----CCcchHHHH-----HHH-HHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence            1  58999988763211     11111 222     221 123333332    334 69999999999664

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.05  E-value=2.4e-09  Score=124.64  Aligned_cols=226  Identities=12%  Similarity=0.080  Sum_probs=133.0

Q ss_pred             CCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQ-AGVRIAQTLLREGFSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~-iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++++||||+|+ ||.++++.|+++|++|+++ .|+......+.......  + .....++.++.+|++|.+++..++.
T Consensus       674 ~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~--~-~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          674 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK--Y-GAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             TTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHH--H-CCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHH--h-hcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4568999999998 9999999999999999998 57665544332211000  0 0001356689999999998887653


Q ss_pred             -------------CcCEEEEccCCCCCC-C-------------CccccHHHHHHHHHHHHHcC------CCeEEEEeccc
Q 044905           81 -------------NAGKVVVTIGPTEDG-P-------------TSEVSTSDAFQVIQAAQLAG------VGHVAIIYDGN  127 (427)
Q Consensus        81 -------------g~d~Vi~~ag~~~~~-~-------------~~~vn~~~~~~ll~Aa~~~g------Vk~~V~vSSs~  127 (427)
                                   .+|++|||||....+ +             .+.+|+.++.+++++++...      -.+||++||..
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence                         589999999976443 2             34677888888888874332      25899998875


Q ss_pred             ccccccCCCCCCCCccchhhhhccccccHHHH-HHHHh---cCCCeEEEEeCCCCC-CCCCCCccceEEecccccCCCCC
Q 044905          128 TTAASTYNVLDGISSFFNNLFSRNQPLTVPEF-LQKVI---ETDVSYTFIKTSLTE-DFSPESSYNVVVSAEASVDANDY  202 (427)
Q Consensus       128 v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~-l~~l~---~~gl~~tilRPG~~~-~~~~~~~~~i~~~~~~~~~~~~~  202 (427)
                      ...+       ....     |+.++ .+.+.+ ...+.   ...++++.|.||++. ...... .....  ......+..
T Consensus       831 g~~g-------g~~a-----YaASK-AAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~-~~~~~--~~~~~~plr  894 (1887)
T 2uv8_A          831 GTFG-------GDGM-----YSESK-LSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NNIIA--EGIEKMGVR  894 (1887)
T ss_dssp             TCSS-------CBTT-----HHHHH-HHGGGHHHHHHHSSCTTTEEEEEEEECCEECC------CCTTH--HHHHTTSCC
T ss_pred             hccC-------CCch-----HHHHH-HHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc-chhHH--HHHHhcCCC
Confidence            3211       1122     22222 112233 22222   122899999999765 211100 00000  000001113


Q ss_pred             cccHHHHHHHHHHHhcCc-c-cccCcEEEEe--cCCCCChhhHHHHHHHH
Q 044905          203 KVAKSQIASLVADVFSNT-A-VAENKVVKVF--TDPSAPARRVDELFSAI  248 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~-~-~~~g~~~nI~--~~~~~~~~s~~ell~~i  248 (427)
                      ..+.+|||..++.++... . -..|..+.+.  ++.. ....+.+++..+
T Consensus       895 ~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~-~~~~l~el~~~l  943 (1887)
T 2uv8_A          895 TFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ-FVPELKEFTAKL  943 (1887)
T ss_dssp             CEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTT-TSSSHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCee-ccccHHHHHHHH
Confidence            568999999999888642 1 1246667663  4432 233556665554

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.04  E-value=1.7e-09  Score=115.28  Aligned_cols=201  Identities=15%  Similarity=0.153  Sum_probs=119.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc---------chHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL---------GAAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~---------~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      ++.++++||||++.||+.+++.|+++|++|++.+|+.         ..++.+......      . ..   -..+|+.|.
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~------~-g~---~~~~d~~d~   75 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK------N-GG---VAVADYNNV   75 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH------T-TC---EEEEECCCT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh------c-CC---eEEEEcCCH
Confidence            3457899999999999999999999999999988764         333333221110      0 00   122455554


Q ss_pred             ---HHH----HHHhcCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccc
Q 044905           73 ---ESI----AKAIGNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTA  130 (427)
Q Consensus        73 ---~sl----~~al~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~  130 (427)
                         +.+    .+.+..+|++|||||.....+           .+++|+.++..+.+++.    +.+-.+||++||.+...
T Consensus        76 ~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~  155 (604)
T 2et6_A           76 LDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLY  155 (604)
T ss_dssp             TCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcC
Confidence               222    233457999999999754322           56778888888777663    44567899998875211


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccH
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v  206 (427)
                      +.     ....     .|+.+| .+...+.+.    +...|+++..|.||...+.    .... .. . ..   ......
T Consensus       156 ~~-----~~~~-----~Y~asK-aal~~lt~~la~El~~~gIrVn~v~Pg~~T~m----~~~~-~~-~-~~---~~~~~p  214 (604)
T 2et6_A          156 GN-----FGQA-----NYASAK-SALLGFAETLAKEGAKYNIKANAIAPLARSRM----TESI-MP-P-PM---LEKLGP  214 (604)
T ss_dssp             CC-----TTBH-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCCCHH----HHTT-SC-H-HH---HTTCSH
T ss_pred             CC-----CCch-----HHHHHH-HHHHHHHHHHHHHhCccCeEEEEEccCCcCcc----cccc-CC-h-hh---hccCCH
Confidence            11     0111     222222 223333333    3467899999999842111    0000 00 0 00   024588


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      +|||.+++.+++......|..+.+.++
T Consensus       215 e~vA~~v~~L~s~~~~itG~~~~vdgG  241 (604)
T 2et6_A          215 EKVAPLVLYLSSAENELTGQFFEVAAG  241 (604)
T ss_dssp             HHHHHHHHHHTSSSCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHhCCcccCCCCEEEECCC
Confidence            999999999987542235777776654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.02  E-value=2.3e-09  Score=114.30  Aligned_cols=199  Identities=13%  Similarity=0.137  Sum_probs=121.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hH-HHHHHHHhhhhhhhhhhhccceEEEecC-CCHHHHH---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AA-QELARLAASYKILSKEELKRLNAVESNF-DSAESIA---   76 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl-~D~~sl~---   76 (427)
                      +.++++||||++.||+.+++.|+++|++|++.+|+.. .. .++...+           .++..+.+|+ .+.+.+.   
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g-----------~~~~~~~~Dv~~~~~~~~~~~  389 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAG-----------GEAWPDQHDVAKDSEAIIKNV  389 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTT-----------CEEEEECCCHHHHHHHHHHHH
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcC-----------CeEEEEEcChHHHHHHHHHHH
Confidence            3468999999999999999999999999999886432 21 2222211           1233566777 5544332   


Q ss_pred             -HHhcCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           77 -KAIGNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        77 -~al~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                       +.+.++|++|||||.....+           .+++|+.++.++.+++.    +.+-.+||++||.+-..+.     ...
T Consensus       390 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-----~~~  464 (604)
T 2et6_A          390 IDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-----FGQ  464 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-----TTB
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-----CCC
Confidence             23457999999999754322           56778888888877664    3455789999887521111     011


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                      .     .|+.+| .+...+.+    .+...|+++..|.||. .....   ... .. . ..   ......+|||.+++.+
T Consensus       465 ~-----~Y~asK-aal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~---~~~-~~-~-~~---~~~~~pe~vA~~v~~L  528 (604)
T 2et6_A          465 A-----NYSSSK-AGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMT---LSI-MR-E-QD---KNLYHADQVAPLLVYL  528 (604)
T ss_dssp             H-----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------CCSSCGGGTHHHHHHT
T ss_pred             h-----hHHHHH-HHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccc---ccc-Cc-h-hh---ccCCCHHHHHHHHHHH
Confidence            1     222222 22233333    3346789999999995 22111   111 00 0 00   1245889999999988


Q ss_pred             hcCcccccCcEEEEecC
Q 044905          217 FSNTAVAENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~~~~g~~~nI~~~  233 (427)
                      ++......|.++.+.++
T Consensus       529 ~s~~~~itG~~~~vdGG  545 (604)
T 2et6_A          529 GTDDVPVTGETFEIGGG  545 (604)
T ss_dssp             TSTTCCCCSCEEEEETT
T ss_pred             hCCccCCCCcEEEECCC
Confidence            87533356788887766

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.99  E-value=3.1e-09  Score=123.59  Aligned_cols=225  Identities=12%  Similarity=0.070  Sum_probs=131.3

Q ss_pred             CCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHH-hhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQ-AGVRIAQTLLREGFSVRAGV-PELGAAQELARLA-ASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~-iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~-~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ..++++||||+|+ ||.++++.|+++|++|++++ |+........... .++    .....++.++.+|++|.+++.+++
T Consensus       651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el----~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARC----GARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHH----CCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHh----hccCCeEEEEEcCCCCHHHHHHHH
Confidence            4578999999999 99999999999999999985 5555443322111 000    000135668999999999888776


Q ss_pred             c-----------CcCEEEEccCCCCCC-C-------------CccccHHHHHHHHHHHHHc------CCCeEEEEecccc
Q 044905           80 G-----------NAGKVVVTIGPTEDG-P-------------TSEVSTSDAFQVIQAAQLA------GVGHVAIIYDGNT  128 (427)
Q Consensus        80 ~-----------g~d~Vi~~ag~~~~~-~-------------~~~vn~~~~~~ll~Aa~~~------gVk~~V~vSSs~v  128 (427)
                      +           .+|+||||+|....+ +             .+.+|+.++.+++++++..      +..+||++||...
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag  806 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHG  806 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhh
Confidence            3           589999999976443 2             3457777888777764322      2257888888753


Q ss_pred             cccccCCCCCCCCccchhhhhccccccHHHHHHHHh----cCCCeEEEEeCCCCC-CCCCCCccceEEecccccCCCCCc
Q 044905          129 TAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI----ETDVSYTFIKTSLTE-DFSPESSYNVVVSAEASVDANDYK  203 (427)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~----~~gl~~tilRPG~~~-~~~~~~~~~i~~~~~~~~~~~~~~  203 (427)
                      ..+       ....|.     .++ ...+.+...+.    ..+++++.|.||++. ...... .....  ......+...
T Consensus       807 ~~g-------g~~aYa-----ASK-AAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-~~~~~--~~~~~~plr~  870 (1878)
T 2uv9_A          807 TFG-------NDGLYS-----ESK-LALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-NNLVA--EGVEKLGVRT  870 (1878)
T ss_dssp             SSS-------CCSSHH-----HHH-HHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-HHHTH--HHHHTTTCCC
T ss_pred             ccC-------CchHHH-----HHH-HHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-chhhH--HHHHhcCCCC
Confidence            211       112222     221 11223322211    123899999999775 321110 00000  0000111235


Q ss_pred             ccHHHHHHHHHHHhcCcc--cccCcEEEEe--cCCCCChhhHHHHHHHH
Q 044905          204 VAKSQIASLVADVFSNTA--VAENKVVKVF--TDPSAPARRVDELFSAI  248 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~--~~~g~~~nI~--~~~~~~~~s~~ell~~i  248 (427)
                      .+.+|+|.+++.++....  -..|..+.+.  ++.. ....+.+++..+
T Consensus       871 ~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~-~~~~l~el~~~l  918 (1878)
T 2uv9_A          871 FSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQ-FIPDLKGLMTKL  918 (1878)
T ss_dssp             BCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGG-GCTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcc-ccCCHHHHHHHH
Confidence            589999999998886432  1246777663  4421 124455555544

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.98  E-value=3.3e-09  Score=116.54  Aligned_cols=196  Identities=14%  Similarity=0.161  Sum_probs=124.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHH-HCCC-eEEEEecCcc---hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLL-REGF-SVRAGVPELG---AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL-~~G~-~V~al~R~~~---~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +.++++||||+|.||+.+++.|+ ++|+ +|++++|+..   .+.++......       .-.++.++.+|++|.+++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-------~G~~v~~~~~Dvsd~~~v~~  601 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA-------YGAEVSLQACDVADRETLAK  601 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh-------cCCcEEEEEeecCCHHHHHH
Confidence            35689999999999999999999 7898 6999999843   23333221110       01245689999999999999


Q ss_pred             HhcC------cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           78 AIGN------AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        78 al~g------~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                      +++.      +|+|||++|......           .+++|+.++.++.+++. ... +||++||.+...+..     +.
T Consensus       602 ~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g~~-----g~  674 (795)
T 3slk_A          602 VLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLGSG-----GQ  674 (795)
T ss_dssp             HHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHTCS-----SC
T ss_pred             HHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCCCC-----CC
Confidence            8864      689999999865433           45677779999998873 234 889898876322211     11


Q ss_pred             CccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEec-ccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSA-EASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~-~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      ..     |+..+ -..+.+...+...|++++.|-||++.+...  ...+.-.. ......+...+..+++...+..++..
T Consensus       675 ~~-----YaAak-a~~~alA~~~~~~Gi~v~sI~pG~v~t~g~--~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~  746 (795)
T 3slk_A          675 GN-----YAAAN-SFLDALAQQRQSRGLPTRSLAWGPWAEHGM--ASTLREAEQDRLARSGLLPISTEEGLSQFDAACGG  746 (795)
T ss_dssp             HH-----HHHHH-HHHHHHHHHHHHTTCCEEEEEECCCSCCCH--HHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTS
T ss_pred             HH-----HHHHH-HHHHHHHHHHHHcCCeEEEEECCeECcchh--hccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence            12     22111 013334445557899999999997654210  00000000 00011233567888988888888764


Q ss_pred             c
Q 044905          220 T  220 (427)
Q Consensus       220 ~  220 (427)
                      .
T Consensus       747 ~  747 (795)
T 3slk_A          747 A  747 (795)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.91  E-value=1.7e-09  Score=122.54  Aligned_cols=208  Identities=14%  Similarity=0.134  Sum_probs=123.2

Q ss_pred             CCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEE-ecCcchHHHHHHHH-hhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQ-AGVRIAQTLLREGFSVRAG-VPELGAAQELARLA-ASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~-iG~~lv~~LL~~G~~V~al-~R~~~~~~~l~~~~-~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ..++++||||+|+ ||.++++.|+++|++|+++ .|+...+..+.... ..+    .....++.++.+|++|.+++.+++
T Consensus       475 ~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael----~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          475 KDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKY----GAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTT----CCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHh----hcCCCeEEEEEeCCCCHHHHHHHH
Confidence            4468999999998 9999999999999999998 56665443332211 000    000135668999999988888765


Q ss_pred             c-------------CcCEEEEccCCCCCC-C-------------CccccHHHHHHHHHHHHHc------CCCeEEEEecc
Q 044905           80 G-------------NAGKVVVTIGPTEDG-P-------------TSEVSTSDAFQVIQAAQLA------GVGHVAIIYDG  126 (427)
Q Consensus        80 ~-------------g~d~Vi~~ag~~~~~-~-------------~~~vn~~~~~~ll~Aa~~~------gVk~~V~vSSs  126 (427)
                      +             .+|+|||+||....+ +             .+++|+.++.+++++++..      +-.+||++||.
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSi  630 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  630 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSC
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEECh
Confidence            2             589999999975433 1             3567888888888887332      12478888876


Q ss_pred             cccccccCCCCCCCCccchhhhhccccccHHHHHHH-Hhc---CCCeEEEEeCCCCC-CCCCCCccceEEecccccCCCC
Q 044905          127 NTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK-VIE---TDVSYTFIKTSLTE-DFSPESSYNVVVSAEASVDAND  201 (427)
Q Consensus       127 ~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~-l~~---~gl~~tilRPG~~~-~~~~~~~~~i~~~~~~~~~~~~  201 (427)
                      +...+       +..     .|+.++ .+.+.+... +.+   ..+++..|.||++. ...... .....  ......+.
T Consensus       631 AG~~G-------g~s-----aYaASK-AAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~-~e~~~--~~l~~ipl  694 (1688)
T 2pff_A          631 HGTFG-------GDG-----MYSESK-LSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA-NNIIA--EGIEKMGV  694 (1688)
T ss_dssp             TTTSS-------CBT-----THHHHH-HHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCT-TTTCS--TTTSSSSC
T ss_pred             HhccC-------Cch-----HHHHHH-HHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCC-chHHH--HHHHhCCC
Confidence            52111       111     233222 123333122 221   22778888899765 211100 00000  00001111


Q ss_pred             CcccHHHHHHHHHHHhcCc-cc-ccCcEEEE
Q 044905          202 YKVAKSQIASLVADVFSNT-AV-AENKVVKV  230 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~-~~-~~g~~~nI  230 (427)
                      ...+.+|||.+++.+++.. .. ..|..+.+
T Consensus       695 R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          695 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            2457899999999988743 11 24666655

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.87  E-value=4.8e-09  Score=89.44  Aligned_cols=99  Identities=22%  Similarity=0.178  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|++++|++.....+...+             ..++.+|..|.+.+.++ +.+
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~-------------~~~~~~d~~~~~~l~~~~~~~   70 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA-------------THAVIANATEENELLSLGIRN   70 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTC-------------SEEEECCTTCHHHHHTTTGGG
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhC-------------CEEEEeCCCCHHHHHhcCCCC
Confidence            4568999998 99999999999999999999999876544332211             23688999999888876 788


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+||++++..     .+.+    ..++..++..++++++..+
T Consensus        71 ~d~vi~~~~~~-----~~~~----~~~~~~~~~~~~~~ii~~~  104 (144)
T 2hmt_A           71 FEYVIVAIGAN-----IQAS----TLTTLLLKELDIPNIWVKA  104 (144)
T ss_dssp             CSEEEECCCSC-----HHHH----HHHHHHHHHTTCSEEEEEC
T ss_pred             CCEEEECCCCc-----hHHH----HHHHHHHHHcCCCeEEEEe
Confidence            99999988742     1222    4577788888888776544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.87  E-value=1.3e-08  Score=87.41  Aligned_cols=95  Identities=17%  Similarity=0.121  Sum_probs=74.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      .+++|+|+|+ |++|+++++.|.++|++|++++++++....+...+.             .++.+|.+|++.+.++ +.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~-------------~~~~gd~~~~~~l~~~~~~~   70 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGF-------------DAVIADPTDESFYRSLDLEG   70 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC-------------EEEECCTTCHHHHHHSCCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCC-------------cEEECCCCCHHHHHhCCccc
Confidence            4568999998 999999999999999999999999887766654433             4899999999998876 568


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||.+.+.      ...|    ..++..++..+..+++
T Consensus        71 ~d~vi~~~~~------~~~n----~~~~~~a~~~~~~~ii  100 (141)
T 3llv_A           71 VSAVLITGSD------DEFN----LKILKALRSVSDVYAI  100 (141)
T ss_dssp             CSEEEECCSC------HHHH----HHHHHHHHHHCCCCEE
T ss_pred             CCEEEEecCC------HHHH----HHHHHHHHHhCCceEE
Confidence            9999988762      2233    4466777777766665

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.79  E-value=1.6e-08  Score=99.74  Aligned_cols=113  Identities=11%  Similarity=0.046  Sum_probs=80.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      .+|+|+|+||+|++|..++..|+.+|  ++|+++++++.. .......-.        .... -+.+ +.+..++.+++.
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~dL~~~--------~~~~-~v~~-~~~t~d~~~al~   75 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTADISHM--------DTGA-VVRG-FLGQQQLEAALT   75 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHHHHHTS--------CSSC-EEEE-EESHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHHHhhcc--------cccc-eEEE-EeCCCCHHHHcC
Confidence            45799999999999999999999999  899999987651 111111000        0000 1222 334567788999


Q ss_pred             CcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           81 NAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      ++|+|||++|.....     .....|...+.++++++.+.+.+.+|+++|-
T Consensus        76 gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN  126 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN  126 (326)
T ss_dssp             TCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             CCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence            999999999865421     1356788899999999999998888877643

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.77  E-value=6.2e-08  Score=82.15  Aligned_cols=98  Identities=15%  Similarity=0.217  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      ..|+|+|+|+ |++|+.+++.|.+.|++|++++|+++....+...            ..+.++.+|..+.+.+.++ +.+
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~------------~~~~~~~~d~~~~~~l~~~~~~~   69 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------IDALVINGDCTKIKTLEDAGIED   69 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------CSSEEEESCTTSHHHHHHTTTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh------------cCcEEEEcCCCCHHHHHHcCccc
Confidence            3579999997 9999999999999999999999998765555322            0223788999999888765 788


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||++++.      ...+    ..++..++..+..++|..
T Consensus        70 ~d~vi~~~~~------~~~~----~~~~~~~~~~~~~~ii~~  101 (140)
T 1lss_A           70 ADMYIAVTGK------EEVN----LMSSLLAKSYGINKTIAR  101 (140)
T ss_dssp             CSEEEECCSC------HHHH----HHHHHHHHHTTCCCEEEE
T ss_pred             CCEEEEeeCC------chHH----HHHHHHHHHcCCCEEEEE
Confidence            9999998753      1222    346677888887777643

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.72  E-value=8.3e-08  Score=97.40  Aligned_cols=78  Identities=18%  Similarity=0.116  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEecCcchHH----------------HHHHHHhhhhhhhhhhhccceEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVPELGAAQ----------------ELARLAASYKILSKEELKRLNAV   65 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R~~~~~~----------------~l~~~~~~~~~~~~~~~~rl~vv   65 (427)
                      ..+++|||||++.||.++++.|++ +|++|+++.|+.....                .+...+           .+...+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G-----------~~a~~i  128 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG-----------LYSKSI  128 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT-----------CCEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC-----------CcEEEE
Confidence            357899999999999999999999 9999999998765321                111111           233478


Q ss_pred             EecCCCHHHHHHHh--------cCcCEEEEccCC
Q 044905           66 ESNFDSAESIAKAI--------GNAGKVVVTIGP   91 (427)
Q Consensus        66 ~gDl~D~~sl~~al--------~g~d~Vi~~ag~   91 (427)
                      .+|++|.+++.+++        ..+|++||++|.
T Consensus       129 ~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          129 NGDAFSDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             ESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             EecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            99999988776654        468999999986

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.72  E-value=1.4e-07  Score=95.13  Aligned_cols=83  Identities=17%  Similarity=0.128  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEecCcchHH------------HHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVPELGAAQ------------ELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R~~~~~~------------~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      ..++++||||++.||.++++.|++ +|++|+++.|+.....            .+......       ...+...+.+|+
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-------~G~~a~~i~~Dv  118 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-------KGLYAKSINGDA  118 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-------TTCCEEEEESCT
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-------cCCceEEEECCC
Confidence            467899999999999999999999 9999999988764311            11110000       012345789999


Q ss_pred             CCHHHHHHHhc-------CcCEEEEccCCC
Q 044905           70 DSAESIAKAIG-------NAGKVVVTIGPT   92 (427)
Q Consensus        70 ~D~~sl~~al~-------g~d~Vi~~ag~~   92 (427)
                      +|.+++.++++       .+|++||++|..
T Consensus       119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          119 FSDEIKQLTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             TSHHHHHHHHHHHHHHTSCEEEEEECCCCS
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEEcCccc
Confidence            99888777653       589999999863

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.71  E-value=1.6e-08  Score=99.97  Aligned_cols=112  Identities=13%  Similarity=0.008  Sum_probs=77.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecC----cchHHHHHHHHhhhhhhhhhhhccceEEEecCCC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPE----LGAAQELARLAASYKILSKEELKRLNAVESNFDS   71 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~----~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D   71 (427)
                      +++||+||||+||+|++++..|+.+|+       +|++++++    ..++........+ .        -+.+ ..|+..
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~-~--------~~~~-~~~i~~   73 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDD-C--------AFPL-LAGMTA   73 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHT-T--------TCTT-EEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhh-h--------cccc-cCcEEE
Confidence            567999999999999999999999885       89998887    3333211110000 0        0001 134444


Q ss_pred             HHHHHHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcC-CC-eEEEEe
Q 044905           72 AESIAKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAG-VG-HVAIIY  124 (427)
Q Consensus        72 ~~sl~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~g-Vk-~~V~vS  124 (427)
                      ...+.++++++|+|||++|.... +.    ....|...+.++++++.+.+ .+ +||++|
T Consensus        74 ~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S  133 (329)
T 1b8p_A           74 HADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG  133 (329)
T ss_dssp             ESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence            45567889999999999996543 11    34578888999999999985 66 666554

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.70  E-value=6.1e-08  Score=93.63  Aligned_cols=82  Identities=24%  Similarity=0.172  Sum_probs=67.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++++||||+|++|++++..|++.|++|+++.|+.++++.+......        ..++.++.+|++|.+++.++++.+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~  189 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK--------RFKVNVTAAETADDASRAEAVKGA  189 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH--------HHTCCCEEEECCSHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh--------cCCcEEEEecCCCHHHHHHHHHhC
Confidence            457899999999999999999999999999999998766555432111        013457889999999999999999


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+|||++|..
T Consensus       190 DvlVn~ag~g  199 (287)
T 1lu9_A          190 HFVFTAGAIG  199 (287)
T ss_dssp             SEEEECCCTT
T ss_pred             CEEEECCCcc
Confidence            9999999853

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.68  E-value=2.5e-07  Score=94.22  Aligned_cols=83  Identities=17%  Similarity=0.098  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCCcHHHHH--HHHHHHHCCCeEEEEecCcch------------HHHHHHHHhhhhhhhhhhhccceEEEec
Q 044905            3 DSGTVFVAGATGQAGVR--IAQTLLREGFSVRAGVPELGA------------AQELARLAASYKILSKEELKRLNAVESN   68 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~--lv~~LL~~G~~V~al~R~~~~------------~~~l~~~~~~~~~~~~~~~~rl~vv~gD   68 (427)
                      ..++++||||++.||.+  ++..|.++|++|+++.|+...            ...+......       ...++..+.+|
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~D  131 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK-------KGLVAKNFIED  131 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-------TTCCEEEEESC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-------cCCcEEEEEee
Confidence            35789999999999999  999999999999999987542            1222111111       01245688999


Q ss_pred             CCCHHHHHHHhc-------CcCEEEEccCCC
Q 044905           69 FDSAESIAKAIG-------NAGKVVVTIGPT   92 (427)
Q Consensus        69 l~D~~sl~~al~-------g~d~Vi~~ag~~   92 (427)
                      ++|.+++.++++       .+|++||++|..
T Consensus       132 vtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          132 AFSNETKDKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             TTCHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence            999988877664       589999999863

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.64  E-value=2.6e-08  Score=97.75  Aligned_cols=111  Identities=14%  Similarity=0.128  Sum_probs=75.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEec--CcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVP--ELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R--~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |||+||||+|++|++++..|+.+|+  +++++++  +..+++.    +......       ...++.+...+    +++.
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~-------~~~~~~i~~~~----d~l~   69 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG-------TRSDANIYVES----DENL   69 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT-------SCCCCEEEEEE----TTCG
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHh-------cCCCeEEEeCC----cchH
Confidence            5899999999999999999999884  6787877  4432221    2111100       00112222221    2356


Q ss_pred             HHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           77 KAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      ++++++|+|||++|.... +.    ....|..++.++++++++.+ +.+++++|-.
T Consensus        70 ~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNP  124 (313)
T 1hye_A           70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNP  124 (313)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSS
T ss_pred             HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCc
Confidence            679999999999996543 21    45788889999999999999 8888887543

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.63  E-value=1.7e-07  Score=81.69  Aligned_cols=99  Identities=11%  Similarity=0.077  Sum_probs=74.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-h
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-I   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l   79 (427)
                      |..++|+|+|+ |.+|+++++.|.+.|++|++++|++ ++.+.+....          ..++.++.+|.+|++.+.++ +
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----------~~~~~~i~gd~~~~~~l~~a~i   69 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----------GDNADVIPGDSNDSSVLKKAGI   69 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----------CTTCEEEESCTTSHHHHHHHTT
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----------cCCCeEEEcCCCCHHHHHHcCh
Confidence            56778999997 9999999999999999999999985 4443443211          12345899999999999887 8


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVA  121 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V  121 (427)
                      .++|.||.+.+.      ...|    ..+...++.. +..+++
T Consensus        70 ~~ad~vi~~~~~------d~~n----~~~~~~a~~~~~~~~ii  102 (153)
T 1id1_A           70 DRCRAILALSDN------DADN----AFVVLSAKDMSSDVKTV  102 (153)
T ss_dssp             TTCSEEEECSSC------HHHH----HHHHHHHHHHTSSSCEE
T ss_pred             hhCCEEEEecCC------hHHH----HHHHHHHHHHCCCCEEE
Confidence            999999998864      2233    4456666665 666665

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.59  E-value=9.5e-08  Score=98.33  Aligned_cols=105  Identities=16%  Similarity=0.213  Sum_probs=78.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+++|+|+| +|++|+++++.|++.|++|++.+|+.++++.+...           ..++..+.+|+.|.+++.+++++
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~-----------~~~~~~~~~Dv~d~~~l~~~l~~   68 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG-----------VQHSTPISLDVNDDAALDAEVAK   68 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT-----------CTTEEEEECCTTCHHHHHHHHTT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh-----------cCCceEEEeecCCHHHHHHHHcC
Confidence            5678999998 79999999999999999999999997765544221           11235788999999999999999


Q ss_pred             cCEEEEccCCCCCC----------C-Ccc--ccHHHHHHHHHHHHHcCCC
Q 044905           82 AGKVVVTIGPTEDG----------P-TSE--VSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~----------~-~~~--vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +|+|||+++.....          . ...  .....+.+++++|+++|+.
T Consensus        69 ~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv~  118 (450)
T 1ff9_A           69 HDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGIT  118 (450)
T ss_dssp             SSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTCE
T ss_pred             CcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCCe
Confidence            99999999864321          0 000  1123568899999999985

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.59  E-value=2.3e-07  Score=92.71  Aligned_cols=92  Identities=18%  Similarity=0.213  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .+|+|+|+|| |++|+.+++.|. +.++|++.+|+..+++.+.              .....+..|+.|.+++.++++++
T Consensus        15 ~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~~--------------~~~~~~~~d~~d~~~l~~~~~~~   78 (365)
T 3abi_A           15 RHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKVK--------------EFATPLKVDASNFDKLVEVMKEF   78 (365)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHT--------------TTSEEEECCTTCHHHHHHHHTTC
T ss_pred             CccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHHh--------------ccCCcEEEecCCHHHHHHHHhCC
Confidence            3568999999 999999998875 5689999999977655542              22347889999999999999999


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                      |+||+++++.     +  +    ..++++|.++|+ |++=
T Consensus        79 DvVi~~~p~~-----~--~----~~v~~~~~~~g~-~yvD  106 (365)
T 3abi_A           79 ELVIGALPGF-----L--G----FKSIKAAIKSKV-DMVD  106 (365)
T ss_dssp             SEEEECCCGG-----G--H----HHHHHHHHHHTC-EEEE
T ss_pred             CEEEEecCCc-----c--c----chHHHHHHhcCc-ceEe
Confidence            9999998763     1  1    458999999997 6663

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.58  E-value=1.7e-07  Score=81.96  Aligned_cols=99  Identities=19%  Similarity=0.152  Sum_probs=74.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-h
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSAESIAKA-I   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l   79 (427)
                      ...++|+|+|+ |.+|+.+++.|.+.|++|++++|++++...+. ..             .+.++.+|..|.+.+.++ +
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~-------------g~~~~~~d~~~~~~l~~~~~   82 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEF-------------SGFTVVGDAAEFETLKECGM   82 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTC-------------CSEEEESCTTSHHHHHTTTG
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcC-------------CCcEEEecCCCHHHHHHcCc
Confidence            45678999997 99999999999999999999999987654442 11             223778999998888776 7


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHH-cCCCeEEEEe
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL-AGVGHVAIIY  124 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~-~gVk~~V~vS  124 (427)
                      .++|+||.+.+..      .    ....++..++. .+..+++...
T Consensus        83 ~~ad~Vi~~~~~~------~----~~~~~~~~~~~~~~~~~iv~~~  118 (155)
T 2g1u_A           83 EKADMVFAFTNDD------S----TNFFISMNARYMFNVENVIARV  118 (155)
T ss_dssp             GGCSEEEECSSCH------H----HHHHHHHHHHHTSCCSEEEEEC
T ss_pred             ccCCEEEEEeCCc------H----HHHHHHHHHHHHCCCCeEEEEE
Confidence            8899999988742      1    22446667776 6666666443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.55  E-value=3.9e-07  Score=110.80  Aligned_cols=159  Identities=14%  Similarity=0.063  Sum_probs=104.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ..++++||||+|.||..+++.|+++|++ |+++.|+..+.........+   +.. ...++.++.+|++|.+++.++++ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~---l~~-~g~~v~~~~~Dvsd~~~v~~~~~~ 1958 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVRE---WRR-QGVQVLVSTSNASSLDGARSLITE 1958 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHH---HHH-TTCEEEEECCCSSSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHH---HHh-CCCEEEEEecCCCCHHHHHHHHHH
Confidence            3568999999999999999999999986 78888886543211110000   000 01245578899999988877653 


Q ss_pred             -----CcCEEEEccCCCCCC-----------CCccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDG-----------PTSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~-----------~~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           .+|+|||+||.....           ..+++|+.++.++.+++...  ...+||++||.+...+..     +.. 
T Consensus      1959 ~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~-----g~~- 2032 (2512)
T 2vz8_A         1959 ATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNA-----GQA- 2032 (2512)
T ss_dssp             HHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCT-----TCH-
T ss_pred             HHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCC-----CcH-
Confidence                 589999999965321           16789999999998887654  346899998876322111     111 


Q ss_pred             cchhhhhccccccHHHHHHHHhcCCCeEEEEeCC
Q 044905          143 FFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS  176 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG  176 (427)
                          .|+..+ ...+.+.+..+..|++.+.+-.|
T Consensus      2033 ----~Y~aaK-aal~~l~~~rr~~Gl~~~a~~~g 2061 (2512)
T 2vz8_A         2033 ----NYGFAN-SAMERICEKRRHDGLPGLAVQWG 2061 (2512)
T ss_dssp             ----HHHHHH-HHHHHHHHHHHHTTSCCCEEEEC
T ss_pred             ----HHHHHH-HHHHHHHHHHHHCCCcEEEEEcc
Confidence                222222 23455666666789987777754

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.54  E-value=1.1e-07  Score=92.81  Aligned_cols=110  Identities=11%  Similarity=0.008  Sum_probs=75.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEec--CcchHHHHHHHHhhhhhhhhh-hhccceEEEecCCCHHHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVP--ELGAAQELARLAASYKILSKE-ELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R--~~~~~~~l~~~~~~~~~~~~~-~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |||+||||+|++|++++..|+.+|+  +++++++  +..+++....   +  +.+.. ...++.+.. +  +    .+++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~---d--l~~~~~~~~~~~v~~-~--~----~~a~   68 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAA---D--TNHGIAYDSNTRVRQ-G--G----YEDT   68 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHH---H--HHHHHTTTCCCEEEE-C--C----GGGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHH---H--HHHHHhhCCCcEEEe-C--C----HHHh
Confidence            5899999999999999999999885  6888877  5443322111   0  00000 011223333 2  2    4568


Q ss_pred             cCcCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           80 GNAGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      +++|+|||++|..... .    ....|...+.++++++.+.+.+.+++++|-
T Consensus        69 ~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN  120 (303)
T 1o6z_A           69 AGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN  120 (303)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            9999999999965431 1    346788899999999999998888888644

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.52  E-value=3.5e-07  Score=92.77  Aligned_cols=97  Identities=20%  Similarity=0.256  Sum_probs=76.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |++|+|+|| |++|+.+++.|++.|   .+|++.+|+.++++.+......      ....++..+.+|++|.+++.++++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~------~~~~~~~~~~~D~~d~~~l~~~l~   73 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA------KGYGEIDITTVDADSIEELVALIN   73 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH------TTCCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh------hcCCceEEEEecCCCHHHHHHHHH
Confidence            579999999 999999999999998   3999999999877666442211      001245689999999999999998


Q ss_pred             C--cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           81 N--AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        81 g--~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +  +|+|||++++.     .      ...++++|.++|+.
T Consensus        74 ~~~~DvVin~ag~~-----~------~~~v~~a~l~~g~~  102 (405)
T 4ina_A           74 EVKPQIVLNIALPY-----Q------DLTIMEACLRTGVP  102 (405)
T ss_dssp             HHCCSEEEECSCGG-----G------HHHHHHHHHHHTCC
T ss_pred             hhCCCEEEECCCcc-----c------ChHHHHHHHHhCCC
Confidence            7  89999999853     1      25688899999985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.46  E-value=7.6e-07  Score=79.67  Aligned_cols=94  Identities=15%  Similarity=0.168  Sum_probs=73.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH--hc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA--IG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a--l~   80 (427)
                      .++|+|+|+ |.+|+.+++.|.+. |++|++++|++++...+...+..             ++.+|.+|.+.+.++  +.
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~-------------~~~gd~~~~~~l~~~~~~~  104 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRN-------------VISGDATDPDFWERILDTG  104 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCC-------------EEECCTTCHHHHHTBCSCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCC-------------EEEcCCCCHHHHHhccCCC
Confidence            458999996 99999999999999 99999999998877666554443             789999999988887  78


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcC-CCeEE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAG-VGHVA  121 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~g-Vk~~V  121 (427)
                      ++|.||.+.+.      ..    ....++..++..+ ..+++
T Consensus       105 ~ad~vi~~~~~------~~----~~~~~~~~~~~~~~~~~ii  136 (183)
T 3c85_A          105 HVKLVLLAMPH------HQ----GNQTALEQLQRRNYKGQIA  136 (183)
T ss_dssp             CCCEEEECCSS------HH----HHHHHHHHHHHTTCCSEEE
T ss_pred             CCCEEEEeCCC------hH----HHHHHHHHHHHHCCCCEEE
Confidence            99999988763      11    2345667777776 44554

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.42  E-value=1.2e-06  Score=80.80  Aligned_cols=94  Identities=18%  Similarity=0.229  Sum_probs=73.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      |+|+|+|+ |.+|+++++.|.++|++|+++.++++....+...            .++.++.+|.+|.+.+.++ +.++|
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~------------~~~~~i~gd~~~~~~l~~a~i~~ad   67 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK------------LKATIIHGDGSHKEILRDAEVSKND   67 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH------------SSSEEEESCTTSHHHHHHHTCCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------------cCCeEEEcCCCCHHHHHhcCcccCC
Confidence            58999997 9999999999999999999999998877665432            1234899999999999887 78999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHH-cCCCeEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL-AGVGHVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~-~gVk~~V  121 (427)
                      +||.+.+.      ...|    ..+...++. .+..+++
T Consensus        68 ~vi~~~~~------d~~n----~~~~~~a~~~~~~~~ii   96 (218)
T 3l4b_C           68 VVVILTPR------DEVN----LFIAQLVMKDFGVKRVV   96 (218)
T ss_dssp             EEEECCSC------HHHH----HHHHHHHHHTSCCCEEE
T ss_pred             EEEEecCC------cHHH----HHHHHHHHHHcCCCeEE
Confidence            99987764      1222    335566665 6777776

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.36  E-value=5.6e-06  Score=101.25  Aligned_cols=225  Identities=17%  Similarity=0.127  Sum_probs=124.3

Q ss_pred             CCCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEEecCcch-----HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            2 KDSGTVFVAGATGQ-AGVRIAQTLLREGFSVRAGVPELGA-----AQELARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         2 ~~~~kIlItGATG~-iG~~lv~~LL~~G~~V~al~R~~~~-----~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      +..++++||||++. ||..+++.|+++|++|++..|+.+.     ++.+......       ...++..+.+|++|.+++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-------~G~~~~~v~~Dvtd~~~v 2206 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-------FDATLWVVPANMASYSDI 2206 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-------TTCEEEEEECCTTCHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-------cCCeEEEEEecCCCHHHH
Confidence            35678999999999 9999999999999999999998775     3333221110       012456789999999888


Q ss_pred             HHHh-----------cCcCEEEEccCC----CCC---------CC---C----ccccHHHHHHHHHHHHH----cCCC--
Q 044905           76 AKAI-----------GNAGKVVVTIGP----TED---------GP---T----SEVSTSDAFQVIQAAQL----AGVG--  118 (427)
Q Consensus        76 ~~al-----------~g~d~Vi~~ag~----~~~---------~~---~----~~vn~~~~~~ll~Aa~~----~gVk--  118 (427)
                      .+++           .+.|++|||||.    ...         ..   .    +++|+.++..+++++..    .+..  
T Consensus      2207 ~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~ 2286 (3089)
T 3zen_D         2207 DKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASR 2286 (3089)
T ss_dssp             HHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCce
Confidence            7763           247999999997    110         00   1    44556666666665543    3322  


Q ss_pred             -eEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh-c----CCCeEEEEeCCCCC-CCCCCCccceEE
Q 044905          119 -HVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI-E----TDVSYTFIKTSLTE-DFSPESSYNVVV  191 (427)
Q Consensus       119 -~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~----~gl~~tilRPG~~~-~~~~~~~~~i~~  191 (427)
                       .++...|+.. +.     .....     .|+-+| .+...+.+.+. +    .++.+..+.||++. ...... .....
T Consensus      2287 ~~ii~~~ss~~-g~-----~g~~~-----aYsASK-aAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~-~~~~~ 2353 (3089)
T 3zen_D         2287 LHVVLPGSPNR-GM-----FGGDG-----AYGEAK-SALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQ-NDAIV 2353 (3089)
T ss_dssp             EEEEEEECSST-TS-----CSSCS-----SHHHHG-GGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTT-TTTTH
T ss_pred             eEEEEECCccc-cc-----CCCch-----HHHHHH-HHHHHHHHHHHhccccCCCeEEEEEeecccCCCccccc-chhHH
Confidence             2222222211 10     00111     233332 33555555554 3    34778888898654 211100 00000


Q ss_pred             ecccccCCCCCcccHHHHHHHHHHHhcCccc--ccCc--EEEEecCCCCChhhHHHHHHHH
Q 044905          192 SAEASVDANDYKVAKSQIASLVADVFSNTAV--AENK--VVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       192 ~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~--~~g~--~~nI~~~~~~~~~s~~ell~~i  248 (427)
                      .....  .+......+|||.+++.+++....  ..+.  .+++.++-......+.++...+
T Consensus      2354 ~~~~~--~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~ 2412 (3089)
T 3zen_D         2354 SAVEE--AGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKA 2412 (3089)
T ss_dssp             HHHGG--GSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHH
T ss_pred             HHHHh--cCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHH
Confidence            00000  111244889999999988863211  1122  3445566433234556665554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.35  E-value=2.4e-06  Score=73.24  Aligned_cols=74  Identities=20%  Similarity=0.227  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~   82 (427)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++++++..+.+...+.             .++.+|.+|++.+.++ +.++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~-------------~~i~gd~~~~~~l~~a~i~~a   72 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGV-------------RAVLGNAANEEIMQLAHLECA   72 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC-------------EEEESCTTSHHHHHHTTGGGC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCC-------------CEEECCCCCHHHHHhcCcccC
Confidence            357999997 999999999999999999999999988777655444             3899999999998875 6789


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |.||.+.+.
T Consensus        73 d~vi~~~~~   81 (140)
T 3fwz_A           73 KWLILTIPN   81 (140)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEEECCC
Confidence            999988764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.29  E-value=1.4e-06  Score=89.91  Aligned_cols=77  Identities=21%  Similarity=0.274  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+++|+|+|| |++|+.++..|++. |++|++++|+.++++.+...            .++..+.+|+.|.+++.+++++
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~------------~~~~~~~~D~~d~~~l~~~l~~   88 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP------------SGSKAISLDVTDDSALDKVLAD   88 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG------------GTCEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh------------cCCcEEEEecCCHHHHHHHHcC
Confidence            4568999998 99999999999998 79999999998877666432            1234678999999999999999


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||++++..
T Consensus        89 ~DvVIn~tp~~   99 (467)
T 2axq_A           89 NDVVISLIPYT   99 (467)
T ss_dssp             SSEEEECSCGG
T ss_pred             CCEEEECCchh
Confidence            99999998864

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.24  E-value=2.1e-06  Score=79.91  Aligned_cols=92  Identities=16%  Similarity=0.159  Sum_probs=72.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~   82 (427)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++.|+++....+. .+.             .++.+|.+|++.|.++ +.++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~-------------~~i~gd~~~~~~l~~a~i~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGA-------------NFVHGDPTRVSDLEKANVRGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTC-------------EEEESCTTCHHHHHHTTCTTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCC-------------eEEEcCCCCHHHHHhcCcchh
Confidence            468999998 9999999999999999 999999988766554 333             4899999999999887 8899


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC-eEE
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG-HVA  121 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk-~~V  121 (427)
                      |.||.+.+.      ...|    ..++..++..+.+ +++
T Consensus        73 d~vi~~~~~------d~~n----~~~~~~a~~~~~~~~ii  102 (234)
T 2aef_A           73 RAVIVDLES------DSET----IHCILGIRKIDESVRII  102 (234)
T ss_dssp             SEEEECCSC------HHHH----HHHHHHHHHHCSSSEEE
T ss_pred             cEEEEcCCC------cHHH----HHHHHHHHHHCCCCeEE
Confidence            999987753      1222    4466777877765 555

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.06  E-value=1.4e-05  Score=81.23  Aligned_cols=95  Identities=14%  Similarity=0.164  Sum_probs=76.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      ..++|+|+|. |.+|+.|++.|.+.|+.|+++.++++....+...+..             ++.||.+|++.|.++ +.+
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~-------------vi~GDat~~~~L~~agi~~   68 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMK-------------VFYGDATRMDLLESAGAAK   68 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCC-------------CEESCTTCHHHHHHTTTTT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCe-------------EEEcCCCCHHHHHhcCCCc
Confidence            3468999997 9999999999999999999999999887777654443             899999999999887 789


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC-eEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG-HVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk-~~V  121 (427)
                      +++||.+.+.      ..    ....++..++..+.. ++|
T Consensus        69 A~~viv~~~~------~~----~n~~i~~~ar~~~p~~~Ii   99 (413)
T 3l9w_A           69 AEVLINAIDD------PQ----TNLQLTEMVKEHFPHLQII   99 (413)
T ss_dssp             CSEEEECCSS------HH----HHHHHHHHHHHHCTTCEEE
T ss_pred             cCEEEECCCC------hH----HHHHHHHHHHHhCCCCeEE
Confidence            9999988763      12    335577788877754 444

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.03  E-value=4.6e-06  Score=82.35  Aligned_cols=103  Identities=11%  Similarity=-0.035  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--e-----EEEEecCcc--hHH----HHHHHHhhhhhhhhhhhccceEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--S-----VRAGVPELG--AAQ----ELARLAASYKILSKEELKRLNAVESNF   69 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~-----V~al~R~~~--~~~----~l~~~~~~~~~~~~~~~~rl~vv~gDl   69 (427)
                      ++++|+||||+|++|++++..|+..|.  +     +++++++..  +++    +|......             ++ .++
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~-------------~~-~~~   67 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP-------------LL-KDV   67 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCT-------------TE-EEE
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhc-------------cc-CCE
Confidence            467999999999999999999998874  5     888888652  221    22110000             01 111


Q ss_pred             CCHHHHHHHhcCcCEEEEccCCCCC-----CCCccccHHHHHHHHHHHHHcCCCe
Q 044905           70 DSAESIAKAIGNAGKVVVTIGPTED-----GPTSEVSTSDAFQVIQAAQLAGVGH  119 (427)
Q Consensus        70 ~D~~sl~~al~g~d~Vi~~ag~~~~-----~~~~~vn~~~~~~ll~Aa~~~gVk~  119 (427)
                      .......++++++|+||+++|....     ...++.|...+.++++++.+.+.+.
T Consensus        68 ~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~  122 (333)
T 5mdh_A           68 IATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKS  122 (333)
T ss_dssp             EEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTT
T ss_pred             EEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            1112345679999999999986432     1245778889999999999998763

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.02  E-value=1.3e-05  Score=78.41  Aligned_cols=106  Identities=15%  Similarity=0.108  Sum_probs=69.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |||+|+||+|++|..++..|+..|  .+|++++++... ...... .+     .....++....+    ..++.+++.++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~-~~a~dL-~~-----~~~~~~l~~~~~----t~d~~~a~~~a   69 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP-GVAADL-SH-----IETRATVKGYLG----PEQLPDCLKGC   69 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH-HHHHHH-TT-----SSSSCEEEEEES----GGGHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccH-HHHHHH-hc-----cCcCceEEEecC----CCCHHHHhCCC
Confidence            589999999999999999999888  799999998721 111111 00     000011122111    12456689999


Q ss_pred             CEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCC-eEE
Q 044905           83 GKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVG-HVA  121 (427)
Q Consensus        83 d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk-~~V  121 (427)
                      |+||+++|.... +.    ....|......+++.+.+.+.. .++
T Consensus        70 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi  114 (314)
T 1mld_A           70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMIC  114 (314)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             CEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEE
Confidence            999999986543 11    3355667788888888887654 344

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.87  E-value=6.4e-06  Score=75.20  Aligned_cols=73  Identities=21%  Similarity=0.154  Sum_probs=52.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |+|+|+||+|++|+.++..|++.|++|++++|++++.+.+... +..   +        .  .+|+. ..++.++++++|
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~---~--------~--~~~~~-~~~~~~~~~~~D   66 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI---A--------G--DASIT-GMKNEDAAEACD   66 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH---H--------S--SCCEE-EEEHHHHHHHCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc---c--------c--cCCCC-hhhHHHHHhcCC
Confidence            5899999999999999999999999999999998766555332 210   0        0  01111 123455678899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||+++.+
T Consensus        67 ~Vi~~~~~   74 (212)
T 1jay_A           67 IAVLTIPW   74 (212)
T ss_dssp             EEEECSCH
T ss_pred             EEEEeCCh
Confidence            99998864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=97.87  E-value=1.7e-05  Score=71.56  Aligned_cols=97  Identities=14%  Similarity=0.125  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHH---HHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAE---SIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~---sl~~al   79 (427)
                      +.++|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+..             . ..|..+.+   .+.+..
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-------------~-~~d~~~~~~~~~~~~~~  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVE-------------Y-VGDSRSVDFADEILELT  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCS-------------E-EEETTCSTHHHHHHHHT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC-------------E-EeeCCcHHHHHHHHHHh
Confidence            356899999999999999999999999999999987665544333322             1 23555533   333433


Q ss_pred             c--CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           80 G--NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        80 ~--g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      .  ++|+||+++|..           .....++.++..  .++|.+++.
T Consensus       104 ~~~~~D~vi~~~g~~-----------~~~~~~~~l~~~--G~~v~~g~~  139 (198)
T 1pqw_A          104 DGYGVDVVLNSLAGE-----------AIQRGVQILAPG--GRFIELGKK  139 (198)
T ss_dssp             TTCCEEEEEECCCTH-----------HHHHHHHTEEEE--EEEEECSCG
T ss_pred             CCCCCeEEEECCchH-----------HHHHHHHHhccC--CEEEEEcCC
Confidence            2  599999998731           223344444433  367766543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=97.81  E-value=2.5e-05  Score=72.98  Aligned_cols=77  Identities=14%  Similarity=0.233  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE
Q 044905            3 DSGTVFVAGA----------------TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE   66 (427)
Q Consensus         3 ~~~kIlItGA----------------TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~   66 (427)
                      ..++|+||||                ||.+|.+|++.|+++|++|+++.|+.+..... +             .+  +..
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~-~-------------~~--~~~   65 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEP-H-------------PN--LSI   65 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC-C-------------TT--EEE
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccC-C-------------CC--eEE
Confidence            3579999999                99999999999999999999999975421000 0             11  333


Q ss_pred             ecCCCHHHH----HHHhcCcCEEEEccCCCCCC
Q 044905           67 SNFDSAESI----AKAIGNAGKVVVTIGPTEDG   95 (427)
Q Consensus        67 gDl~D~~sl----~~al~g~d~Vi~~ag~~~~~   95 (427)
                      .++...+.+    ...+.++|++|++|+.....
T Consensus        66 ~~v~s~~em~~~v~~~~~~~Dili~aAAvsD~~   98 (232)
T 2gk4_A           66 REITNTKDLLIEMQERVQDYQVLIHSMAVSDYT   98 (232)
T ss_dssp             EECCSHHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred             EEHhHHHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence            455565444    44556899999999976533

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.81  E-value=5.1e-05  Score=78.12  Aligned_cols=97  Identities=19%  Similarity=0.213  Sum_probs=74.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      ..|+|+|.|+ |.+|++|++.|.++||+|+++.++++.+..+....            .+.++.||-++++.|.++ ++.
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------------~~~~i~Gd~~~~~~L~~Agi~~   68 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------------DLRVVNGHASHPDVLHEAGAQD   68 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------------SCEEEESCTTCHHHHHHHTTTT
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------------CcEEEEEcCCCHHHHHhcCCCc
Confidence            4689999998 99999999999999999999999998777664321            124899999999999987 678


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVAI  122 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V~  122 (427)
                      +|.+|-+.+.      -++|    +-+...|+.. ++.+++-
T Consensus        69 ad~~ia~t~~------De~N----l~~~~~Ak~~~~~~~~ia  100 (461)
T 4g65_A           69 ADMLVAVTNT------DETN----MAACQVAFTLFNTPNRIA  100 (461)
T ss_dssp             CSEEEECCSC------HHHH----HHHHHHHHHHHCCSSEEE
T ss_pred             CCEEEEEcCC------hHHH----HHHHHHHHHhcCCcccee
Confidence            9998865542      3444    2244556553 7777663

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.78  E-value=3.9e-05  Score=75.36  Aligned_cols=91  Identities=15%  Similarity=0.180  Sum_probs=72.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      ++|+|.|+ |.+|+.+++.|.++|+ |++++++++..+ +...+.             .++.||.+|++.|.++ ++++|
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~-------------~~i~gd~~~~~~L~~a~i~~a~  179 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGA-------------NFVHGDPTRVSDLEKANVRGAR  179 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTC-------------EEEESCTTSHHHHHHTCSTTEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCc-------------EEEEeCCCCHHHHHhcChhhcc
Confidence            47999997 9999999999999999 999999998776 544333             4899999999999988 88999


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC-eEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG-HVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk-~~V  121 (427)
                      .||.+.+.      .+    ....++..+++.+.+ +++
T Consensus       180 ~vi~~~~~------d~----~n~~~~~~ar~~~~~~~ii  208 (336)
T 1lnq_A          180 AVIVDLES------DS----ETIHCILGIRKIDESVRII  208 (336)
T ss_dssp             EEEECCSS------HH----HHHHHHHHHHTTCTTSEEE
T ss_pred             EEEEcCCc------cH----HHHHHHHHHHHHCCCCeEE
Confidence            99987752      12    334566777877765 554

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=97.77  E-value=5.6e-05  Score=70.41  Aligned_cols=74  Identities=12%  Similarity=0.122  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE
Q 044905            2 KDSGTVFVAGA----------------TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV   65 (427)
Q Consensus         2 ~~~~kIlItGA----------------TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv   65 (427)
                      +..++|+||||                ||.+|.++++.|+++|++|+++.|+.. +. . +.               .+.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-~-~~---------------g~~   67 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-T-PP---------------FVK   67 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-C-CT---------------TEE
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-c-CC---------------CCe
Confidence            45678999999                799999999999999999999988652 11 0 00               134


Q ss_pred             EecCCCHHHHHHH----hcCcCEEEEccCCCC
Q 044905           66 ESNFDSAESIAKA----IGNAGKVVVTIGPTE   93 (427)
Q Consensus        66 ~gDl~D~~sl~~a----l~g~d~Vi~~ag~~~   93 (427)
                      ..|+++.+.+.++    +.++|++|++||...
T Consensus        68 ~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           68 RVDVMTALEMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             EEECCSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             EEccCcHHHHHHHHHHhcCCCCEEEECCcccC
Confidence            5688886655544    467999999999754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.73  E-value=7.2e-05  Score=74.68  Aligned_cols=76  Identities=18%  Similarity=0.166  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|+|+ |.+|..+++.|...|++|++++|++.+.+.+......             .+.+|..+.+.+.+.+.++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~-------------~~~~~~~~~~~l~~~~~~~  230 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG-------------RVITLTATEANIKKSVQHA  230 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-------------SEEEEECCHHHHHHHHHHC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc-------------eEEEecCCHHHHHHHHhCC
Confidence            3579999999 9999999999999999999999998766554331111             2456777888899999999


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+||++++..
T Consensus       231 DvVi~~~g~~  240 (369)
T 2eez_A          231 DLLIGAVLVP  240 (369)
T ss_dssp             SEEEECCC--
T ss_pred             CEEEECCCCC
Confidence            9999999854

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.65  E-value=6e-05  Score=74.61  Aligned_cols=103  Identities=17%  Similarity=0.095  Sum_probs=68.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      |.++||.|+|++|++|+.++..|+..|  .+|++++.+..+++.    |... . +      ...++.+ .      ..+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~-~------~~~~i~~-t------~d~   70 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G-F------EGLNLTF-T------SDI   70 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C-C------TTCCCEE-E------SCH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c-C------CCCceEE-c------CCH
Confidence            567899999999999999999999998  589999998765432    2211 1 0      0011111 1      124


Q ss_pred             HHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCe
Q 044905           76 AKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGH  119 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~  119 (427)
                      .++++++|+||+++|.... +.    ....|......+++.+.+.+-+-
T Consensus        71 ~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a  119 (343)
T 3fi9_A           71 KEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDC  119 (343)
T ss_dssp             HHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             HHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            5679999999999986432 11    24566667778888888877554

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.62  E-value=8.1e-05  Score=72.78  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-H---HHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-A---ESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~---~sl~~a   78 (427)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+..+.+.+...+..              ...|..+ .   +.+.+.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~--------------~~~d~~~~~~~~~~~~~~  210 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD--------------AAFNYKTVNSLEEALKKA  210 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS--------------EEEETTSCSCHHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc--------------EEEecCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999988766555443432              2236554 1   223333


Q ss_pred             h-cCcCEEEEccCC
Q 044905           79 I-GNAGKVVVTIGP   91 (427)
Q Consensus        79 l-~g~d~Vi~~ag~   91 (427)
                      . .++|++|+++|.
T Consensus       211 ~~~~~d~vi~~~g~  224 (333)
T 1v3u_A          211 SPDGYDCYFDNVGG  224 (333)
T ss_dssp             CTTCEEEEEESSCH
T ss_pred             hCCCCeEEEECCCh
Confidence            2 368999999983

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.59  E-value=9.9e-06  Score=80.55  Aligned_cols=101  Identities=19%  Similarity=0.135  Sum_probs=61.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-----C-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG-----F-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G-----~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      |.|++|+|.||||++|+.|++.|++++     + +|+++.++.+..+.+......+   ..  ...+.+  .|+ |.+  
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l---~~--~~~~~~--~~~-~~~--   76 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHL---TP--LAHRVV--EPT-EAA--   76 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTC---GG--GTTCBC--EEC-CHH--
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccc---cc--cceeee--ccC-CHH--
Confidence            556799999999999999999999988     4 7888874432111110000000   00  001112  233 333  


Q ss_pred             HHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           76 AKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                        .+.++|+||.++|...           +..++..+ +.|+ ++|-+|+..
T Consensus        77 --~~~~~DvVf~alg~~~-----------s~~~~~~~-~~G~-~vIDlSa~~  113 (352)
T 2nqt_A           77 --VLGGHDAVFLALPHGH-----------SAVLAQQL-SPET-LIIDCGADF  113 (352)
T ss_dssp             --HHTTCSEEEECCTTSC-----------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred             --HhcCCCEEEECCCCcc-----------hHHHHHHH-hCCC-EEEEECCCc
Confidence              3569999999988641           25577777 7786 566666443

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=97.59  E-value=0.00011  Score=72.29  Aligned_cols=75  Identities=20%  Similarity=0.167  Sum_probs=55.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH----HHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA----ESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~----~sl~~a   78 (427)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+..              ...|+.+.    +.+.+.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~--------------~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE--------------VFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC--------------EEEETTTCSCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc--------------eEEecCccHhHHHHHHHH
Confidence            346899999999999999999999999999999998876555444432              12365532    233333


Q ss_pred             hc-CcCEEEEccCC
Q 044905           79 IG-NAGKVVVTIGP   91 (427)
Q Consensus        79 l~-g~d~Vi~~ag~   91 (427)
                      .. ++|+||+++|.
T Consensus       235 ~~~~~D~vi~~~g~  248 (347)
T 2hcy_A          235 TDGGAHGVINVSVS  248 (347)
T ss_dssp             HTSCEEEEEECSSC
T ss_pred             hCCCCCEEEECCCc
Confidence            32 69999999874

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.58  E-value=0.0001  Score=71.89  Aligned_cols=74  Identities=19%  Similarity=0.176  Sum_probs=55.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+..              ...|..+.   +.+.+..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW--------------QVINYREEDLVERLKEIT  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS--------------EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC--------------EEEECCCccHHHHHHHHh
Confidence            346899999999999999999999999999999998776666554443              12355443   3344443


Q ss_pred             c--CcCEEEEccC
Q 044905           80 G--NAGKVVVTIG   90 (427)
Q Consensus        80 ~--g~d~Vi~~ag   90 (427)
                      .  ++|+||+++|
T Consensus       206 ~~~~~D~vi~~~g  218 (327)
T 1qor_A          206 GGKKVRVVYDSVG  218 (327)
T ss_dssp             TTCCEEEEEECSC
T ss_pred             CCCCceEEEECCc
Confidence            2  6899999998

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.56  E-value=0.00052  Score=67.37  Aligned_cols=108  Identities=16%  Similarity=0.189  Sum_probs=72.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      +.+++|.|+|+ |++|+.++..|+..|+  +|++++++..+++.    |... ..  .    ...++.+..+|.      
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~--~----~~~~v~i~~~~~------   68 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KA--F----APQPVKTSYGTY------   68 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GG--G----SSSCCEEEEECG------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cc--c----ccCCeEEEeCcH------
Confidence            45679999997 9999999999999996  89999998776543    2221 10  0    002233443432      


Q ss_pred             HHHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           76 AKAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                       +++.++|+||+++|.... +.    ....|......+++++.+.+-.-++++.
T Consensus        69 -~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvv  121 (326)
T 3pqe_A           69 -EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA  121 (326)
T ss_dssp             -GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             -HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence             468999999999986432 11    2345555667788888877655455443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.55  E-value=0.00043  Score=67.66  Aligned_cols=80  Identities=16%  Similarity=0.138  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecC---cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPE---LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~---~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ..++++|+|+ |.+|+.++..|.+.|. +|+++.|+   .++++.+......        .....+...++.+.+.+.+.
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~--------~~~~~~~~~~~~~~~~l~~~  223 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINS--------KTDCKAQLFDIEDHEQLRKE  223 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH--------HSSCEEEEEETTCHHHHHHH
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhh--------hcCCceEEeccchHHHHHhh
Confidence            3578999998 8999999999999998 89999999   6666655432111        01123455678888888889


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      +.++|+||++...
T Consensus       224 l~~aDiIINaTp~  236 (315)
T 3tnl_A          224 IAESVIFTNATGV  236 (315)
T ss_dssp             HHTCSEEEECSST
T ss_pred             hcCCCEEEECccC
Confidence            9999999998754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.52  E-value=0.00013  Score=71.43  Aligned_cols=75  Identities=19%  Similarity=0.204  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++|+.++.+.+...+..              ...|..+.   +.+.+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~--------------~~~d~~~~~~~~~i~~~~  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH--------------HTINYSTQDFAEVVREIT  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS--------------EEEETTTSCHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC--------------EEEECCCHHHHHHHHHHh
Confidence            356899999999999999999999999999999998776666554443              12355443   3444444


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|+||+++|.
T Consensus       211 ~~~~~d~vi~~~g~  224 (333)
T 1wly_A          211 GGKGVDVVYDSIGK  224 (333)
T ss_dssp             TTCCEEEEEECSCT
T ss_pred             CCCCCeEEEECCcH
Confidence              369999999985

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.51  E-value=0.00058  Score=67.04  Aligned_cols=112  Identities=14%  Similarity=0.110  Sum_probs=67.8

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++.+++|.|+|+ |++|+.++..|+..|.  +|++++++..+++.......+.   .+. ...+.+..+|       .++
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~---~~~-~~~~~i~~~~-------~~a   73 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDA---LPF-TSPKKIYSAE-------YSD   73 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT---GGG-SCCCEEEECC-------GGG
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhh---hhh-cCCcEEEECc-------HHH
Confidence            356789999997 9999999999999986  8999999876554222111110   000 1223344333       246


Q ss_pred             hcCcCEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           79 IGNAGKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +.++|+||+++|.... +    ..++.|..-...+++.+.+.+-.-++++.
T Consensus        74 ~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvv  124 (326)
T 3vku_A           74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             GTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEEC
T ss_pred             hcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEc
Confidence            8999999999986432 1    13455655667788888877655455443

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.51  E-value=0.00018  Score=73.80  Aligned_cols=100  Identities=18%  Similarity=0.211  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhh---------hhccceEEEecCCCHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKE---------ELKRLNAVESNFDSAES   74 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~---------~~~rl~vv~gDl~D~~s   74 (427)
                      +|+|.|+|+ |++|..++..|.+.|++|++++|++++.+.+.. +..+ +..+.         ...++.+ .   +|   
T Consensus         2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~-g~~~-i~e~gl~~~l~~~~~~~~l~~-t---~d---   71 (450)
T 3gg2_A            2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNS-GTIP-IYEPGLEKMIARNVKAGRLRF-G---TE---   71 (450)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TCSC-CCSTTHHHHHHHHHHTTSEEE-E---SC---
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc-CCCc-ccCCCHHHHHHhhcccCcEEE-E---CC---
Confidence            379999996 999999999999999999999999988777654 2110 00000         0111211 1   22   


Q ss_pred             HHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHH
Q 044905           75 IAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL  114 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~  114 (427)
                      +.++++++|+||.+++.... .....++.....+++....
T Consensus        72 ~~ea~~~aDvViiaVptp~~-~~~~~dl~~v~~v~~~i~~  110 (450)
T 3gg2_A           72 IEQAVPEADIIFIAVGTPAG-EDGSADMSYVLDAARSIGR  110 (450)
T ss_dssp             HHHHGGGCSEEEECCCCCBC-TTSSBCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCEEEEEcCCCcc-cCCCcChHHHHHHHHHHHh
Confidence            45578899999999876432 1223333344555554443

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.51  E-value=6.9e-05  Score=74.24  Aligned_cols=97  Identities=15%  Similarity=0.086  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +|++|+|.||||++|+.+++.|++++ ++++++.++.+....+..   .+..+.     .+  ....+.+.+   . +.+
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~---~~~~~~-----g~--~~~~~~~~~---~-~~~   68 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHF---VHPNLR-----GR--TNLKFVPPE---K-LEP   68 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGG---TCGGGT-----TT--CCCBCBCGG---G-CCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHH---hCchhc-----Cc--ccccccchh---H-hcC
Confidence            46789999999999999999999876 588888875432111110   000000     00  011122322   2 578


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEec
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYD  125 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSS  125 (427)
                      +|+||.+++..           .+..++..+.++|+ ++|-+|+
T Consensus        69 vDvV~~a~g~~-----------~s~~~a~~~~~aG~-~VId~Sa  100 (345)
T 2ozp_A           69 ADILVLALPHG-----------VFAREFDRYSALAP-VLVDLSA  100 (345)
T ss_dssp             CSEEEECCCTT-----------HHHHTHHHHHTTCS-EEEECSS
T ss_pred             CCEEEEcCCcH-----------HHHHHHHHHHHCCC-EEEEcCc
Confidence            99999998753           34567777778887 4665553

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.48  E-value=0.00018  Score=68.94  Aligned_cols=67  Identities=21%  Similarity=0.213  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ||+|.|+|+||.+|+.++..|++.|++|++++|++++.+.+...++.             .     .+   +.+++.++|
T Consensus        11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~-------------~-----~~---~~~~~~~aD   69 (286)
T 3c24_A           11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIP-------------L-----TD---GDGWIDEAD   69 (286)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCC-------------C-----CC---SSGGGGTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCC-------------c-----CC---HHHHhcCCC
Confidence            46999999999999999999999999999999998776655432211             1     12   234678899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.++.+
T Consensus        70 vVi~av~~   77 (286)
T 3c24_A           70 VVVLALPD   77 (286)
T ss_dssp             EEEECSCH
T ss_pred             EEEEcCCc
Confidence            99998864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.47  E-value=0.0002  Score=70.83  Aligned_cols=75  Identities=17%  Similarity=0.226  Sum_probs=55.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      +..+|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+..              ...|..+.   +.+.+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~--------------~~~d~~~~~~~~~~~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH--------------EVFNHREVNYIDKIKKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS--------------EEEETTSTTHHHHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC--------------EEEeCCCchHHHHHHHHc
Confidence            346899999999999999999999999999999998776655444443              12355443   3344444


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|+||+++|.
T Consensus       236 ~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          236 GEKGIDIIIEMLAN  249 (351)
T ss_dssp             CTTCEEEEEESCHH
T ss_pred             CCCCcEEEEECCCh
Confidence            3  69999999873

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.47  E-value=0.0002  Score=70.75  Aligned_cols=75  Identities=16%  Similarity=0.115  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+..              ...|..+.   +.+.+..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~~~~~  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA--------------AGFNYKKEDFSEATLKFT  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS--------------EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc--------------EEEecCChHHHHHHHHHh
Confidence            346899999999999999999999999999999998776666555543              12344443   3444444


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|++|+++|.
T Consensus       228 ~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 KGAGVNLILDCIGG  241 (354)
T ss_dssp             TTSCEEEEEESSCG
T ss_pred             cCCCceEEEECCCc
Confidence            3  68999999984

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.46  E-value=0.00032  Score=69.75  Aligned_cols=75  Identities=21%  Similarity=0.239  Sum_probs=58.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|+|+|+ |.+|+.+++.|...|++|++++|++.+++.+...+...             +.....+.+.+.+.+.++|
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~D  232 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR-------------VELLYSNSAEIETAVAEAD  232 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG-------------SEEEECCHHHHHHHHHTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce-------------eEeeeCCHHHHHHHHcCCC
Confidence            479999999 99999999999999999999999998877766554431             1112234566777888999


Q ss_pred             EEEEccCCC
Q 044905           84 KVVVTIGPT   92 (427)
Q Consensus        84 ~Vi~~ag~~   92 (427)
                      +||++++..
T Consensus       233 vVI~~~~~~  241 (361)
T 1pjc_A          233 LLIGAVLVP  241 (361)
T ss_dssp             EEEECCCCT
T ss_pred             EEEECCCcC
Confidence            999998754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=97.46  E-value=0.00034  Score=69.99  Aligned_cols=79  Identities=16%  Similarity=0.105  Sum_probs=59.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEecCcchH----------------HHHHHHHhhhhhhhhhhhccceEE
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLL-REGFSVRAGVPELGAA----------------QELARLAASYKILSKEELKRLNAV   65 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL-~~G~~V~al~R~~~~~----------------~~l~~~~~~~~~~~~~~~~rl~vv   65 (427)
                      .++++||||||+.+|.+.+..|. +.|..|+++.++....                +.+...|           .+...+
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-----------~~a~~i  117 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-----------LYSVTI  117 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-----------CCEEEE
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC-----------CCceeE
Confidence            46799999999999999999988 6799999998765311                1111112           233479


Q ss_pred             EecCCCHHHHHHHhc-------CcCEEEEccCCC
Q 044905           66 ESNFDSAESIAKAIG-------NAGKVVVTIGPT   92 (427)
Q Consensus        66 ~gDl~D~~sl~~al~-------g~d~Vi~~ag~~   92 (427)
                      .+|++|.+++.++++       ++|++||+++..
T Consensus       118 ~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          118 DGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             ESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             eCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            999999888887764       689999999865

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.42  E-value=3.9e-05  Score=75.88  Aligned_cols=91  Identities=16%  Similarity=0.139  Sum_probs=55.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++|+|.||||++|+.|++.|++++   .+++++....+....+     .        .....+...|+ |++    .+.
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~-----~--------~~g~~i~~~~~-~~~----~~~   67 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM-----G--------FAESSLRVGDV-DSF----DFS   67 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE-----E--------ETTEEEECEEG-GGC----CGG
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcc-----c--------cCCcceEEecC-CHH----Hhc
Confidence            4689999999999999999999765   4566665321110000     0        00001111222 222    257


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++|+||.+.|..           .+..++..+.++|++ +|.+|
T Consensus        68 ~~DvV~~a~g~~-----------~s~~~a~~~~~aG~k-vId~S   99 (340)
T 2hjs_A           68 SVGLAFFAAAAE-----------VSRAHAERARAAGCS-VIDLS   99 (340)
T ss_dssp             GCSEEEECSCHH-----------HHHHHHHHHHHTTCE-EEETT
T ss_pred             CCCEEEEcCCcH-----------HHHHHHHHHHHCCCE-EEEeC
Confidence            899999998742           346678888888985 55444

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.41  E-value=0.00013  Score=70.21  Aligned_cols=84  Identities=14%  Similarity=0.086  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++||+|+|+|+ |.+|+.++..|.+.|++|++++|++++.+.+...+.....     .........+..+.+.+..++.+
T Consensus         1 ~~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   74 (316)
T 2ew2_A            1 SNAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADF-----NGEEVVANLPIFSPEEIDHQNEQ   74 (316)
T ss_dssp             ---CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEE-----TTEEEEECCCEECGGGCCTTSCC
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEe-----CCCeeEecceeecchhhcccCCC
Confidence            35679999997 9999999999999999999999998877766554432100     00000001112232223334558


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.+..+
T Consensus        75 ~d~vi~~v~~   84 (316)
T 2ew2_A           75 VDLIIALTKA   84 (316)
T ss_dssp             CSEEEECSCH
T ss_pred             CCEEEEEecc
Confidence            9999998853

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.41  E-value=0.0013  Score=64.42  Aligned_cols=113  Identities=18%  Similarity=0.045  Sum_probs=70.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +|.+++|.|+|| |.+|..++..|+..|+ +|+++++++.+++.......+.   .........+...  .|.    +++
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~---~~~~~~~~~v~~t--~d~----~a~   73 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAES---SPVDGFDAKFTGA--NDY----AAI   73 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHH---HHHHTCCCCEEEE--SSG----GGG
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhch---hhhcCCCCEEEEe--CCH----HHH
Confidence            477889999998 9999999999999998 9999999987653221100000   0000011223221  121    478


Q ss_pred             cCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           80 GNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +++|+||.++|.... +.    .+..|......+++.+.+.+-.-++++
T Consensus        74 ~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv  122 (324)
T 3gvi_A           74 EGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVIC  122 (324)
T ss_dssp             TTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEe
Confidence            999999999986432 11    234565666777888877764444444

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.40  E-value=0.00028  Score=69.92  Aligned_cols=99  Identities=14%  Similarity=0.099  Sum_probs=65.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHh-c
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAI-G   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al-~   80 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+...            ++..+-.+. +.+.+.. .
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~------------~~~~~~~~~~~~~~~~~~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDR------------PINYKTEPVGTVLKQEYPE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE------------EEETTTSCHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcE------------EEecCChhHHHHHHHhcCC
Confidence            3468999999999999999999999999999999987766666555541            222222222 2333322 3


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      ++|+||.++|..           .....++.++..|  +++.+++.
T Consensus       231 g~D~vid~~g~~-----------~~~~~~~~l~~~G--~iv~~g~~  263 (362)
T 2c0c_A          231 GVDVVYESVGGA-----------MFDLAVDALATKG--RLIVIGFI  263 (362)
T ss_dssp             CEEEEEECSCTH-----------HHHHHHHHEEEEE--EEEECCCG
T ss_pred             CCCEEEECCCHH-----------HHHHHHHHHhcCC--EEEEEeCC
Confidence            689999998731           2234455554443  67766543

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.39  E-value=0.00024  Score=70.10  Aligned_cols=72  Identities=19%  Similarity=0.171  Sum_probs=53.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      .+|+|+||+|.+|..+++.+...|+ +|++++|+.++.+.+.. .+..              ...|..+.   +.+.+..
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~--------------~~~d~~~~~~~~~~~~~~  227 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD--------------AAINYKKDNVAEQLRESC  227 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS--------------EEEETTTSCHHHHHHHHC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc--------------eEEecCchHHHHHHHHhc
Confidence            7999999999999999999999999 99999999876655543 3432              22355442   2333333


Q ss_pred             c-CcCEEEEccC
Q 044905           80 G-NAGKVVVTIG   90 (427)
Q Consensus        80 ~-g~d~Vi~~ag   90 (427)
                      . ++|+||+++|
T Consensus       228 ~~~~d~vi~~~G  239 (357)
T 2zb4_A          228 PAGVDVYFDNVG  239 (357)
T ss_dssp             TTCEEEEEESCC
T ss_pred             CCCCCEEEECCC
Confidence            3 6999999998

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.39  E-value=0.00021  Score=69.81  Aligned_cols=75  Identities=16%  Similarity=0.195  Sum_probs=55.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHH-HHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQEL-ARLAASYKILSKEELKRLNAVESNFDSA---ESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l-~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~a   78 (427)
                      +..+|+|+||+|.+|..+++.+...|++|++++|++++.+.+ ...+..              ...|..+.   +.+.+.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~~~~  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD--------------GAIDYKNEDLAAGLKRE  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS--------------EEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC--------------EEEECCCHHHHHHHHHh
Confidence            356899999999999999999999999999999998876666 444443              12344443   233333


Q ss_pred             h-cCcCEEEEccCC
Q 044905           79 I-GNAGKVVVTIGP   91 (427)
Q Consensus        79 l-~g~d~Vi~~ag~   91 (427)
                      . .++|+||+++|.
T Consensus       215 ~~~~~d~vi~~~g~  228 (336)
T 4b7c_A          215 CPKGIDVFFDNVGG  228 (336)
T ss_dssp             CTTCEEEEEESSCH
T ss_pred             cCCCceEEEECCCc
Confidence            2 369999999873

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.38  E-value=0.00013  Score=71.55  Aligned_cols=74  Identities=16%  Similarity=0.254  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCH----HHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSA----ESIAK   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~----~sl~~   77 (427)
                      ..++|+|+||+|.+|..+++.+...|++|++++|+..+.+.+. ..+..             . ..|..+.    +.+.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~-------------~-~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD-------------D-AFNYKEESDLTAALKR  220 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS-------------E-EEETTSCSCSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc-------------e-EEecCCHHHHHHHHHH
Confidence            3468999999999999999999999999999999987766554 33433             1 2254432    33333


Q ss_pred             Hh-cCcCEEEEccC
Q 044905           78 AI-GNAGKVVVTIG   90 (427)
Q Consensus        78 al-~g~d~Vi~~ag   90 (427)
                      .. .++|+||+++|
T Consensus       221 ~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          221 CFPNGIDIYFENVG  234 (345)
T ss_dssp             HCTTCEEEEEESSC
T ss_pred             HhCCCCcEEEECCC
Confidence            32 36999999987

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.38  E-value=7e-05  Score=74.60  Aligned_cols=97  Identities=13%  Similarity=0.157  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+++|+|.||||++|+.+++.|++++ ++++++.+..+....+......+       ..   .+..|+.-.+  ...+.+
T Consensus        15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~-------~~---~v~~dl~~~~--~~~~~~   82 (359)
T 1xyg_A           15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHL-------RA---QKLPTLVSVK--DADFST   82 (359)
T ss_dssp             CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGG-------TT---SCCCCCBCGG--GCCGGG
T ss_pred             cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchh-------cC---cccccceecc--hhHhcC
Confidence            44689999999999999999999886 58998886543221121111100       00   0012322222  234578


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+||.|++..           .+...+..+ ++|+ ++|-+|
T Consensus        83 vDvVf~atp~~-----------~s~~~a~~~-~aG~-~VId~s  112 (359)
T 1xyg_A           83 VDAVFCCLPHG-----------TTQEIIKEL-PTAL-KIVDLS  112 (359)
T ss_dssp             CSEEEECCCTT-----------THHHHHHTS-CTTC-EEEECS
T ss_pred             CCEEEEcCCch-----------hHHHHHHHH-hCCC-EEEECC
Confidence            99999998753           224566666 7777 455444

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.37  E-value=0.00017  Score=66.39  Aligned_cols=67  Identities=21%  Similarity=0.256  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ++++|+|+| +|.+|+.++..|++.|++|++++|++++.+.+...+.             .+.        ++.++++++
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~-------------~~~--------~~~~~~~~~   84 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAA-------------QVT--------FQEEAVSSP   84 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTS-------------EEE--------EHHHHTTSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC-------------cee--------cHHHHHhCC
Confidence            457899999 6999999999999999999999999776554422111             121        244568899


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+..+
T Consensus        85 DvVi~av~~   93 (215)
T 2vns_A           85 EVIFVAVFR   93 (215)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCh
Confidence            999998875

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.36  E-value=0.0015  Score=63.69  Aligned_cols=113  Identities=10%  Similarity=0.059  Sum_probs=69.9

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ||.+++|.|+|| |.+|..++..|+.+|  .+|+++++++.+++.......+   ..+.....+.+. +|  +    .++
T Consensus         3 ~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~---~~~~~~~~~~v~-~~--~----~~a   71 (317)
T 3d0o_A            3 KFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKH---ATPYSPTTVRVK-AG--E----YSD   71 (317)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHH---HGGGSSSCCEEE-EC--C----GGG
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHh---hhhhcCCCeEEE-eC--C----HHH
Confidence            466789999999 999999999999888  4899999887654321111000   000000222333 22  2    456


Q ss_pred             hcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           79 IGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +.++|+||.++|.... +.    ....|......+++.+.+.+-.-++++.
T Consensus        72 ~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           72 CHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             GTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            8999999999987543 21    1244445556677777777655555554

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.32  E-value=0.00049  Score=66.21  Aligned_cols=74  Identities=22%  Similarity=0.204  Sum_probs=56.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++.+.+.+...+..             . ..|..+.+.+.+.+.++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~-------------~-~~~~~~~~~~~~~~~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE-------------E-AATYAEVPERAKAWGGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS-------------E-EEEGGGHHHHHHHTTSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC-------------E-EEECCcchhHHHHhcCc
Confidence            356899999999999999999999999999999998877666555543             1 23554413344445889


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||. +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 874

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.32  E-value=0.00013  Score=62.48  Aligned_cols=71  Identities=14%  Similarity=0.221  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|+|+|+ |.+|+.++..|...|++|++..|++++.+.+.....            ..+.  ...+   +.+++.++|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~------------~~~~--~~~~---~~~~~~~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE------------YEYV--LIND---IDSLIKNND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT------------CEEE--ECSC---HHHHHHTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC------------CceE--eecC---HHHHhcCCC
Confidence            579999996 999999999999999999999999887665533211            0121  2333   445678999


Q ss_pred             EEEEccCCC
Q 044905           84 KVVVTIGPT   92 (427)
Q Consensus        84 ~Vi~~ag~~   92 (427)
                      +||.+.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999988754

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.30  E-value=0.00043  Score=68.33  Aligned_cols=75  Identities=23%  Similarity=0.271  Sum_probs=56.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+...            +  .|..+.   +.+.+..
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~------------~--~~~~~~~~~~~~~~~~  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR------------G--INYRSEDFAAVIKAET  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE------------E--EETTTSCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE------------E--EeCCchHHHHHHHHHh
Confidence            3468999999999999999999999999999999998877776666541            2  243332   3333333


Q ss_pred             -cCcCEEEEccCC
Q 044905           80 -GNAGKVVVTIGP   91 (427)
Q Consensus        80 -~g~d~Vi~~ag~   91 (427)
                       .++|+||.++|.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence             369999999984

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.29  E-value=0.00037  Score=67.83  Aligned_cols=111  Identities=18%  Similarity=0.091  Sum_probs=66.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +++|.|+|| |++|..++..|+..|+ +|++++++.++++.......+ .. . .......+...  +|   + ++++++
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~-~~-~-~~~~~~~i~~t--~d---~-~a~~~a   71 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE-AS-P-IEGFDVRVTGT--NN---Y-ADTANS   71 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT-TH-H-HHTCCCCEEEE--SC---G-GGGTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH-hH-h-hcCCCeEEEEC--CC---H-HHHCCC
Confidence            469999999 9999999999999996 999999888765432111000 00 0 00011122221  22   2 458999


Q ss_pred             CEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |+||.++|......     ....|......+.+.+.+.+...+++++
T Consensus        72 D~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~  118 (309)
T 1ur5_A           72 DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV  118 (309)
T ss_dssp             SEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred             CEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEc
Confidence            99999998654211     1233444556777777777655555554

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.29  E-value=0.0028  Score=62.05  Aligned_cols=112  Identities=18%  Similarity=0.091  Sum_probs=71.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+++|.|+|+ |.+|..++..|+..|. +|+++++++.+++.......+.   .........+...+  |    .++++
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~---~~~~~~~~~v~~t~--d----~~a~~   72 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQT---CPIEGVDFKVRGTN--D----YKDLE   72 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTT---HHHHTCCCCEEEES--C----GGGGT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhh---hhhcCCCcEEEEcC--C----HHHHC
Confidence            66789999996 9999999999999988 9999999987653221111110   00000122233211  2    24799


Q ss_pred             CcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++|+||+++|.... +.    .+..|......+++.+.+.+-.-++++
T Consensus        73 ~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~viv  120 (321)
T 3p7m_A           73 NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVIC  120 (321)
T ss_dssp             TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEE
Confidence            99999999986542 11    234465666778888887764434434

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.27  E-value=0.00038  Score=67.92  Aligned_cols=68  Identities=24%  Similarity=0.323  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +++|+|.|+|+ |.+|..++..|++.|++|++.+|++++.+.+...+..              ..      .++.+++++
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~--------------~~------~~~~e~~~~   87 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGAT--------------IH------EQARAAARD   87 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCE--------------EE------SSHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCE--------------ee------CCHHHHHhc
Confidence            35679999987 9999999999999999999999998877766543322              11      134567889


Q ss_pred             cCEEEEccC
Q 044905           82 AGKVVVTIG   90 (427)
Q Consensus        82 ~d~Vi~~ag   90 (427)
                      +|+||.+..
T Consensus        88 aDvVi~~vp   96 (320)
T 4dll_A           88 ADIVVSMLE   96 (320)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEECC
Confidence            999998875

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.26  E-value=0.0004  Score=67.62  Aligned_cols=75  Identities=16%  Similarity=0.133  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~al   79 (427)
                      +..+|+|+||+|.+|..+++.+...|++|+++++++++.+.+...+...            +  .|..+   .+.+.+..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~------------~--~~~~~~~~~~~~~~~~  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE------------T--IDYSHEDVAKRVLELT  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE------------E--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE------------E--EeCCCccHHHHHHHHh
Confidence            3568999999999999999999999999999999988777666666541            2  23333   33444444


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|+||.++|.
T Consensus       206 ~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTCCEEEEEESSCG
T ss_pred             CCCCceEEEECCCh
Confidence            3  69999999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.26  E-value=0.00048  Score=67.60  Aligned_cols=74  Identities=23%  Similarity=0.211  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      ..++|+|+||+|.+|..+++.+...|++|++++|++++.+.+...+..             . ..|..+.   +.+.+..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~-------------~-~~d~~~~~~~~~~~~~~  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGAD-------------E-TVNYTHPDWPKEVRRLT  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-------------E-EEETTSTTHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC-------------E-EEcCCcccHHHHHHHHh
Confidence            346899999999999999999999999999999998876666555543             2 2355543   3444444


Q ss_pred             c--CcCEEEEccC
Q 044905           80 G--NAGKVVVTIG   90 (427)
Q Consensus        80 ~--g~d~Vi~~ag   90 (427)
                      .  ++|+||+++|
T Consensus       232 ~~~~~d~vi~~~g  244 (343)
T 2eih_A          232 GGKGADKVVDHTG  244 (343)
T ss_dssp             TTTCEEEEEESSC
T ss_pred             CCCCceEEEECCC
Confidence            3  6899999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.26  E-value=0.00085  Score=65.87  Aligned_cols=76  Identities=28%  Similarity=0.306  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~-   80 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++++.++.+.+...+...            ++..+ .+ .+.+.+... 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~------------v~~~~-~~~~~~v~~~~~~  225 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADI------------VLPLE-EGWAKAVREATGG  225 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE------------EEESS-TTHHHHHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE------------EecCc-hhHHHHHHHHhCC
Confidence            3468999999999999999999999999999999998877776666541            33333 33 234444443 


Q ss_pred             -CcCEEEEccCC
Q 044905           81 -NAGKVVVTIGP   91 (427)
Q Consensus        81 -g~d~Vi~~ag~   91 (427)
                       ++|+||.++|.
T Consensus       226 ~g~Dvvid~~g~  237 (342)
T 4eye_A          226 AGVDMVVDPIGG  237 (342)
T ss_dssp             SCEEEEEESCC-
T ss_pred             CCceEEEECCch
Confidence             59999999985

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.26  E-value=0.00025  Score=67.66  Aligned_cols=74  Identities=18%  Similarity=0.188  Sum_probs=52.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++++|+|+ |.+|+.++..|++.|++|++..|+.++++.+.......        .  .+...|+   +.+..  .++
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--------~--~~~~~~~---~~~~~--~~~  181 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------G--SIQALSM---DELEG--HEF  181 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------S--SEEECCS---GGGTT--CCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--------C--CeeEecH---HHhcc--CCC
Confidence            4578999998 78999999999999999999999988776664321110        0  1222333   22222  589


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+||++++..
T Consensus       182 DivVn~t~~~  191 (271)
T 1nyt_A          182 DLIINATSSG  191 (271)
T ss_dssp             SEEEECCSCG
T ss_pred             CEEEECCCCC
Confidence            9999999864

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.24  E-value=0.0027  Score=61.97  Aligned_cols=111  Identities=14%  Similarity=0.118  Sum_probs=69.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc--chHHHHHHHHhhhhhhhhhhh--ccceEEEecCCCHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL--GAAQELARLAASYKILSKEEL--KRLNAVESNFDSAESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~--~rl~vv~gDl~D~~sl~   76 (427)
                      |..++|.|+|+ |.+|..++..|+..|+ +|+++++++  .+++....     .+.+....  ....+...+  |    .
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~-----dl~~~~~~~~~~~~i~~t~--d----~   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKAL-----DMLEASPVQGFDANIIGTS--D----Y   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHH-----HHHHHHHHHTCCCCEEEES--C----G
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhh-----hHHHhhhhccCCCEEEEcC--C----H
Confidence            45579999997 9999999999999999 999999984  33322111     00111000  111222221  2    2


Q ss_pred             HHhcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           77 KAIGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .+++++|+||.++|......     .+..|......+++++.+.+-..++++.
T Consensus        74 ~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvv  126 (315)
T 3tl2_A           74 ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVL  126 (315)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEC
Confidence            46899999999998654321     2344555667778888777655455443

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.23  E-value=0.00033  Score=67.98  Aligned_cols=68  Identities=25%  Similarity=0.294  Sum_probs=54.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.||+|.|+|+ |.+|..++..|++.||+|++.+|++++.+.+...+..             .    ..   ++.+++.+
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~-------------~----~~---~~~~~~~~   77 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGAS-------------V----CE---SPAEVIKK   77 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCE-------------E----CS---SHHHHHHH
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCe-------------E----cC---CHHHHHHh
Confidence            46789999996 9999999999999999999999999887777654332             1    12   23456778


Q ss_pred             cCEEEEccC
Q 044905           82 AGKVVVTIG   90 (427)
Q Consensus        82 ~d~Vi~~ag   90 (427)
                      +|+||.+..
T Consensus        78 aDvvi~~vp   86 (310)
T 3doj_A           78 CKYTIAMLS   86 (310)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEEcC
Confidence            999998875

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.23  E-value=0.0021  Score=65.97  Aligned_cols=98  Identities=17%  Similarity=0.261  Sum_probs=76.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g   81 (427)
                      +.++|+|.|| |.+|.++++.| .++++|+.+-++..++..+...           .++..++.||-+|.+-|.++ +..
T Consensus       234 ~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~-----------l~~~~Vi~GD~td~~~L~ee~i~~  300 (461)
T 4g65_A          234 PYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEE-----------LENTIVFCGDAADQELLTEENIDQ  300 (461)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHH-----------CTTSEEEESCTTCHHHHHHTTGGG
T ss_pred             cccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHH-----------CCCceEEeccccchhhHhhcCchh
Confidence            4568999998 99999999986 5679999999999888777543           23345899999999988876 688


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|++|.+.+.      -+.|+.    +.-.|++.|+++++-.
T Consensus       301 ~D~~ia~T~~------De~Ni~----~~llAk~~gv~kvIa~  332 (461)
T 4g65_A          301 VDVFIALTNE------DETNIM----SAMLAKRMGAKKVMVL  332 (461)
T ss_dssp             CSEEEECCSC------HHHHHH----HHHHHHHTTCSEEEEE
T ss_pred             hcEEEEcccC------cHHHHH----HHHHHHHcCCcccccc
Confidence            9999987763      345533    4456788899998743

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.21  E-value=0.00098  Score=65.50  Aligned_cols=112  Identities=16%  Similarity=0.024  Sum_probs=66.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +++|.|+|| |.+|+.++..|...|+ +|++++++.++++.......+  ..... .....+...  +|   +.+++.++
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~--~~~~~-~~~~~i~~t--~d---~~ea~~~a   79 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH--VTSVV-DTNVSVRAE--YS---YEAALTGA   79 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH--HHHHT-TCCCCEEEE--CS---HHHHHTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHh--hhhcc-CCCCEEEEe--CC---HHHHhCCC
Confidence            468999998 9999999999999998 999999998765442111000  00000 001111110  23   34578999


Q ss_pred             CEEEEccCCCCCCCC----------ccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTEDGPT----------SEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~----------~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |+||.++|.......          ...|..-...+++.+.+..-.-+++++
T Consensus        80 DiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~  131 (331)
T 1pzg_A           80 DCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  131 (331)
T ss_dssp             SEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            999999975432111          122333456677777766533344333

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.21  E-value=0.0002  Score=68.61  Aligned_cols=37  Identities=19%  Similarity=0.239  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEE-ecCc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAG-VPEL   38 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al-~R~~   38 (427)
                      |.|++|+|+||+|.+|+.+++.+.+. +++++++ +|+.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            67889999999999999999999976 6888875 5554

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.19  E-value=0.00058  Score=66.70  Aligned_cols=75  Identities=17%  Similarity=0.162  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~al   79 (427)
                      ...+|+|+||+|.+|..+++.+...|++|+++++++++.+.+...+...            +  .|..+   .+.+.+..
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~------------~--~~~~~~~~~~~~~~~~  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEY------------L--INASKEDILRQVLKFT  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE------------E--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE------------E--EeCCCchHHHHHHHHh
Confidence            3468999999999999999999999999999999988776665555441            2  23333   33444444


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|+||.++|.
T Consensus       214 ~~~g~D~vid~~g~  227 (334)
T 3qwb_A          214 NGKGVDASFDSVGK  227 (334)
T ss_dssp             TTSCEEEEEECCGG
T ss_pred             CCCCceEEEECCCh
Confidence            3  69999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.19  E-value=0.00071  Score=66.49  Aligned_cols=75  Identities=19%  Similarity=0.124  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~a   78 (427)
                      +..+|+|+|++|.+|..+++.+... |++|+++++++++.+.+...+..              ...|..+.   +.+.+.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~--------------~~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD--------------YVINASMQDPLAEIRRI  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS--------------EEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC--------------EEecCCCccHHHHHHHH
Confidence            3468999999989999999999999 99999999998776666555543              12244442   335555


Q ss_pred             h--cCcCEEEEccCC
Q 044905           79 I--GNAGKVVVTIGP   91 (427)
Q Consensus        79 l--~g~d~Vi~~ag~   91 (427)
                      .  .++|+||+++|.
T Consensus       236 ~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          236 TESKGVDAVIDLNNS  250 (347)
T ss_dssp             TTTSCEEEEEESCCC
T ss_pred             hcCCCceEEEECCCC
Confidence            5  379999999985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.18  E-value=0.00052  Score=66.43  Aligned_cols=75  Identities=19%  Similarity=0.217  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+|+|+ |.+|+.++..|++.|+ +|++..|+.++++.+......          ...    +..+.+.+.+.+.+
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~----------~~~----~~~~~~~~~~~~~~  204 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE----------RRS----AYFSLAEAETRLAE  204 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS----------SSC----CEECHHHHHHTGGG
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh----------ccC----ceeeHHHHHhhhcc
Confidence            3578999998 8899999999999997 999999998877766542110          000    12234567778899


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||++++..
T Consensus       205 aDivIn~t~~~  215 (297)
T 2egg_A          205 YDIIINTTSVG  215 (297)
T ss_dssp             CSEEEECSCTT
T ss_pred             CCEEEECCCCC
Confidence            99999998764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.17  E-value=0.0005  Score=65.83  Aligned_cols=43  Identities=28%  Similarity=0.226  Sum_probs=37.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA   45 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~   45 (427)
                      |++++|.|+|+ |.+|+.++..|++.|++|++.+|+++.++.+.
T Consensus         2 m~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~   44 (283)
T 4e12_A            2 TGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAK   44 (283)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence            45679999997 99999999999999999999999987665443

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.17  E-value=0.0014  Score=65.13  Aligned_cols=71  Identities=18%  Similarity=0.195  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .+|+|.|+|. |.+|..++..|++.|++|++.+|++++.+.+...+..                 ...+.+.+.+.....
T Consensus        21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~-----------------~~~s~~e~~~~a~~~   82 (358)
T 4e21_A           21 QSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIA-----------------GARSIEEFCAKLVKP   82 (358)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCB-----------------CCSSHHHHHHHSCSS
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCE-----------------EeCCHHHHHhcCCCC
Confidence            4579999995 9999999999999999999999998877766543332                 123444333333334


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+...
T Consensus        83 DvVi~~vp~   91 (358)
T 4e21_A           83 RVVWLMVPA   91 (358)
T ss_dssp             CEEEECSCG
T ss_pred             CEEEEeCCH
Confidence            999988754

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.17  E-value=0.00069  Score=58.07  Aligned_cols=85  Identities=20%  Similarity=0.246  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .+++|.|.|+|   |.+|..+++.|++.||+|+.+.++....     .|..              +..++      .++.
T Consensus        13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~--------------~~~s~------~el~   67 (138)
T 1y81_A           13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLK--------------CYRSV------RELP   67 (138)
T ss_dssp             -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEE--------------CBSSG------GGSC
T ss_pred             CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCee--------------ecCCH------HHhC
Confidence            46789999998   8999999999999999988777654321     1111              11122      2334


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +.+|.++.+..+           ..+..+++.|...|++.+++.
T Consensus        68 ~~vDlvii~vp~-----------~~v~~v~~~~~~~g~~~i~~~  100 (138)
T 1y81_A           68 KDVDVIVFVVPP-----------KVGLQVAKEAVEAGFKKLWFQ  100 (138)
T ss_dssp             TTCCEEEECSCH-----------HHHHHHHHHHHHTTCCEEEEC
T ss_pred             CCCCEEEEEeCH-----------HHHHHHHHHHHHcCCCEEEEc
Confidence            578999887652           144667777777899876643

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.16  E-value=0.0026  Score=62.36  Aligned_cols=112  Identities=13%  Similarity=0.081  Sum_probs=69.8

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |++++||.|+|| |.+|..++..|+..+.  +|++++++..+++.......+.   .+. ..++.+.. |  +    .++
T Consensus         6 ~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~---~~~-~~~~~i~~-~--~----~~a   73 (326)
T 2zqz_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNA---LPF-TSPKKIYS-A--E----YSD   73 (326)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT---GGG-SCCCEEEE-C--C----GGG
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHH---HHh-cCCeEEEE-C--C----HHH
Confidence            466789999999 9999999999998885  8999999876554322111110   000 12233332 2  2    346


Q ss_pred             hcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           79 IGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +.++|+||.++|.....-     ....|......+++.+.+.+-.-++++.
T Consensus        74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  124 (326)
T 2zqz_A           74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVA  124 (326)
T ss_dssp             GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence            899999999998654211     2234445566777777777654444443

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.15  E-value=0.00069  Score=62.35  Aligned_cols=68  Identities=15%  Similarity=0.140  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEE-EecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRA-GVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~a-l~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |+||+|.|+| +|.+|+.++..|++.|++|++ .+|++++.+.+... +..             ...   .+.    +.+
T Consensus        21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~-------------~~~---~~~----~~~   79 (220)
T 4huj_A           21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGAS-------------VKA---VEL----KDA   79 (220)
T ss_dssp             GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTT-------------EEE---CCH----HHH
T ss_pred             hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCC-------------ccc---ChH----HHH
Confidence            4578999999 599999999999999999999 88998877666432 222             221   222    346


Q ss_pred             cCcCEEEEccC
Q 044905           80 GNAGKVVVTIG   90 (427)
Q Consensus        80 ~g~d~Vi~~ag   90 (427)
                      .++|+||.+..
T Consensus        80 ~~aDvVilavp   90 (220)
T 4huj_A           80 LQADVVILAVP   90 (220)
T ss_dssp             TTSSEEEEESC
T ss_pred             hcCCEEEEeCC
Confidence            78999999875

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.14  E-value=0.00072  Score=66.23  Aligned_cols=75  Identities=21%  Similarity=0.263  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~al   79 (427)
                      ...+|+|+||+|.+|..+++.+...|++|++++++.++.+.+...+...            ++  |..+   .+.+.+..
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~------------~~--~~~~~~~~~~~~~~~  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAY------------VI--DTSTAPLYETVMELT  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE------------EE--ETTTSCHHHHHHHHT
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcE------------EE--eCCcccHHHHHHHHh
Confidence            3468999999999999999999999999999999998877776666641            22  4333   23444444


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|+||.++|.
T Consensus       210 ~~~g~Dvvid~~g~  223 (340)
T 3gms_A          210 NGIGADAAIDSIGG  223 (340)
T ss_dssp             TTSCEEEEEESSCH
T ss_pred             CCCCCcEEEECCCC
Confidence            3  69999999874

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.14  E-value=0.00049  Score=68.22  Aligned_cols=99  Identities=14%  Similarity=0.091  Sum_probs=57.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCc-chHHHHHHHHhhhh--hhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPEL-GAAQELARLAASYK--ILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~-~~~~~l~~~~~~~~--~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++++|+|.||||++|+.+++.|+++. ++|+++..+. +....+........  .+. ....  .+...|+ |++.    
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~-~~~~--~~~~~~~-d~~~----   74 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIP-EEVQ--DLPIVST-NYED----   74 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCC-HHHH--TCBEECS-SGGG----
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccc-cCCc--eeEEeeC-CHHH----
Confidence            46789999999999999999998875 6888886222 21111111000000  000 0000  1212333 3332    


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +.++|+||.+.+..           .+..++..+.++|++ +|
T Consensus        75 ~~~vDvVf~atp~~-----------~s~~~a~~~~~aG~~-VI  105 (350)
T 2ep5_A           75 HKDVDVVLSALPNE-----------LAESIELELVKNGKI-VV  105 (350)
T ss_dssp             GTTCSEEEECCCHH-----------HHHHHHHHHHHTTCE-EE
T ss_pred             hcCCCEEEECCChH-----------HHHHHHHHHHHCCCE-EE
Confidence            46899999887642           346678888888875 54

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.13  E-value=0.0021  Score=62.61  Aligned_cols=80  Identities=15%  Similarity=0.165  Sum_probs=58.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecC---cchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPE---LGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~---~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ..++++|+|+ |.+|+.++..|.+.|. +|+++.|+   .++++.+......        .....+...++.+.+.+.+.
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~--------~~~~~v~~~~~~~l~~~~~~  217 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNE--------NTDCVVTVTDLADQHAFTEA  217 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHH--------HSSCEEEEEETTCHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhh--------ccCcceEEechHhhhhhHhh
Confidence            3578999998 8999999999999997 89999999   6556555432111        00112445577776556677


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      +.++|+||++.+.
T Consensus       218 l~~~DiIINaTp~  230 (312)
T 3t4e_A          218 LASADILTNGTKV  230 (312)
T ss_dssp             HHHCSEEEECSST
T ss_pred             ccCceEEEECCcC
Confidence            8889999997764

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.09  E-value=0.0029  Score=59.54  Aligned_cols=98  Identities=15%  Similarity=0.109  Sum_probs=65.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc-------------------chHHHHHHHHhhhhhhhhhhhccce
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL-------------------GAAQELARLAASYKILSKEELKRLN   63 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~-------------------~~~~~l~~~~~~~~~~~~~~~~rl~   63 (427)
                      .++|+|.|+ |.+|+.++..|.+.|. +|++++++.                   .+++.+.......     ...-+++
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~-----np~~~v~  104 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI-----NPHIAIT  104 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-----CTTSEEE
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH-----CCCcEEE
Confidence            368999997 8999999999999996 899999987                   4544332211110     0001223


Q ss_pred             EEEecCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           64 AVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        64 vv~gDl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      .+..+++ .+.+.+.+.++|+||.+...      .+    .-..+.++|...|+.
T Consensus       105 ~~~~~~~-~~~~~~~~~~~DvVi~~~d~------~~----~~~~l~~~~~~~~~p  148 (249)
T 1jw9_B          105 PVNALLD-DAELAALIAEHDLVLDCTDN------VA----VRNQLNAGCFAAKVP  148 (249)
T ss_dssp             EECSCCC-HHHHHHHHHTSSEEEECCSS------HH----HHHHHHHHHHHHTCC
T ss_pred             EEeccCC-HhHHHHHHhCCCEEEEeCCC------HH----HHHHHHHHHHHcCCC
Confidence            4444554 45667788999999988743      22    224567788888875

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.09  E-value=0.0021  Score=60.41  Aligned_cols=97  Identities=20%  Similarity=0.154  Sum_probs=63.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----   79 (427)
                      ++|+|+|++|.+|+.+++.+.+. +++++++......+..+....+              =+..|++.++.+...+    
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~--------------DvvIDfT~p~a~~~~~~~a~   66 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNT--------------EVVIDFTHPDVVMGNLEFLI   66 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTC--------------CEEEECSCTTTHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCC--------------cEEEEccChHHHHHHHHHHH
Confidence            58999999999999999999876 8999988765544444332122              2677888877665433    


Q ss_pred             -cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc-CCCeEEEEec
Q 044905           80 -GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA-GVGHVAIIYD  125 (427)
Q Consensus        80 -~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSS  125 (427)
                       .+++.|+.+.|...         .....|.++|+++ ++ .+++.+.
T Consensus        67 ~~g~~~VigTTG~~~---------e~~~~l~~aa~~~~~~-~vv~a~N  104 (245)
T 1p9l_A           67 DNGIHAVVGTTGFTA---------ERFQQVESWLVAKPNT-SVLIAPN  104 (245)
T ss_dssp             HTTCEEEECCCCCCH---------HHHHHHHHHHHTSTTC-EEEECSC
T ss_pred             HcCCCEEEcCCCCCH---------HHHHHHHHHHHhCCCC-CEEEECC
Confidence             36788887776421         1224455666655 55 4444443

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=97.09  E-value=0.0017  Score=62.92  Aligned_cols=114  Identities=18%  Similarity=0.212  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .|++|.++|- |..|..+++.|++.||+|++..|++++.+.+...+....---.+-.....++..-+.|.+.+...+.+.
T Consensus         2 ~M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~   80 (300)
T 3obb_A            2 HMKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDD   80 (300)
T ss_dssp             -CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSS
T ss_pred             CcCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhch
Confidence            3679999996 999999999999999999999999998888877665421100011123334444455555555544332


Q ss_pred             CEEEEccCCCCC-CCCccccHHHHHHHHHHHHHcCC
Q 044905           83 GKVVVTIGPTED-GPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        83 d~Vi~~ag~~~~-~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      +.++....+... =....+....+..+.+.+...|+
T Consensus        81 ~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~  116 (300)
T 3obb_A           81 DGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL  116 (300)
T ss_dssp             SSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTC
T ss_pred             hhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence            111100000000 00223444466777777777776

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.08  E-value=0.0042  Score=60.64  Aligned_cols=109  Identities=13%  Similarity=0.073  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+||.|+|| |++|..++..|+..+.  +|++++++..+++.......+.   .+. ...+.+. .|  +    .+++.+
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~---~~~-~~~~~v~-~~--~----~~a~~~   72 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA---QAF-TAPKKIY-SG--E----YSDCKD   72 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGG---GGG-SCCCEEE-EC--C----GGGGTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHH---HHh-cCCeEEE-EC--C----HHHhCC
Confidence            479999999 9999999999999885  8999999876554322111110   000 1223333 22  2    346999


Q ss_pred             cCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+||.++|.....     .....|......+++.+.+.+-.-++++.
T Consensus        73 aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  120 (318)
T 1ez4_A           73 ADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (318)
T ss_dssp             CSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99999999865421     23445656677788888887655555443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.08  E-value=0.0011  Score=66.41  Aligned_cols=75  Identities=21%  Similarity=0.268  Sum_probs=58.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++|+|+|+ |.+|+.+++.|...|++|++++|++.+++.+.. .+..              +..+..+.+.+.+.+.+
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~--------------~~~~~~~~~~l~~~l~~  231 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR--------------IHTRYSSAYELEGAVKR  231 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS--------------SEEEECCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe--------------eEeccCCHHHHHHHHcC
Confidence            4578999998 999999999999999999999999877655543 2222              12233456678888889


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||.+++..
T Consensus       232 aDvVi~~~~~p  242 (377)
T 2vhw_A          232 ADLVIGAVLVP  242 (377)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            99999988743

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.07  E-value=0.0011  Score=65.27  Aligned_cols=101  Identities=14%  Similarity=0.113  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCc---chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPEL---GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~---~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +.|++|+|.||||++|+.|++.|.++ .++++.+.++.   +..+.+....+.+   ..  ...+.+...  .|.+   .
T Consensus         2 ~~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~---~~--~~~~~v~~~--~~~~---~   71 (337)
T 3dr3_A            2 NAMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQL---KG--IVELPLQPM--SDIS---E   71 (337)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGG---TT--TCCCBEEEE--SSGG---G
T ss_pred             CCceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccc---cC--ccceeEecc--CCHH---H
Confidence            35789999999999999999999985 57888886554   3222222111110   00  001223322  0222   2


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++.++|+||.|.+..           .+..++..+.+.|++ +|-+|
T Consensus        72 ~~~~~Dvvf~a~p~~-----------~s~~~~~~~~~~g~~-vIDlS  106 (337)
T 3dr3_A           72 FSPGVDVVFLATAHE-----------VSHDLAPQFLEAGCV-VFDLS  106 (337)
T ss_dssp             TCTTCSEEEECSCHH-----------HHHHHHHHHHHTTCE-EEECS
T ss_pred             HhcCCCEEEECCChH-----------HHHHHHHHHHHCCCE-EEEcC
Confidence            237899999987642           335677777778874 55444

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.05  E-value=0.00067  Score=66.56  Aligned_cols=80  Identities=21%  Similarity=0.169  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHH-hhhhhhhhhhhccce-EEEe--cCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLA-ASYKILSKEELKRLN-AVES--NFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~-~~~~~~~~~~~~rl~-vv~g--Dl~D~~sl~~   77 (427)
                      |++|+|+|+|+ |.+|+.++..|.+.|++|++++|++++.+.+...+ ..  +. .   ..+. ....  ...|   +.+
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~-~---~~~~~~~~~~~~~~~---~~~   71 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII--AE-G---PGLAGTAHPDLLTSD---IGL   71 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEE--EE-S---SSCCEEECCSEEESC---HHH
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeE--Ee-c---cccccccccceecCC---HHH
Confidence            45679999997 99999999999999999999999987766665432 11  00 0   0000 0000  1123   345


Q ss_pred             HhcCcCEEEEccCC
Q 044905           78 AIGNAGKVVVTIGP   91 (427)
Q Consensus        78 al~g~d~Vi~~ag~   91 (427)
                      ++.++|+||.++..
T Consensus        72 ~~~~~D~vi~~v~~   85 (359)
T 1bg6_A           72 AVKDADVILIVVPA   85 (359)
T ss_dssp             HHTTCSEEEECSCG
T ss_pred             HHhcCCEEEEeCCc
Confidence            67899999998865

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.04  E-value=0.001  Score=66.06  Aligned_cols=99  Identities=18%  Similarity=0.128  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcc-hHHHHHHHHhhhh--hhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELG-AAQELARLAASYK--ILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~-~~~~l~~~~~~~~--~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +++|+|.||||++|+.+++.|++++ ++|+++.++.. ....+........  .+ +.....+.+...|.   +.   .+
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~---~~   80 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDI-PENIKDMVVIPTDP---KH---EE   80 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCC-CHHHHTCBCEESCT---TS---GG
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhccccccccc-ccCceeeEEEeCCH---HH---Hh
Confidence            3689999999999999999998875 78998876432 1111111000000  00 00001111222222   22   33


Q ss_pred             c-CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           80 G-NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        80 ~-g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      . ++|+||.+.+..           .+..++..+.++|++ +|
T Consensus        81 ~~~~DvV~~atp~~-----------~~~~~a~~~~~aG~~-VI  111 (354)
T 1ys4_A           81 FEDVDIVFSALPSD-----------LAKKFEPEFAKEGKL-IF  111 (354)
T ss_dssp             GTTCCEEEECCCHH-----------HHHHHHHHHHHTTCE-EE
T ss_pred             cCCCCEEEECCCch-----------HHHHHHHHHHHCCCE-EE
Confidence            5 899999988642           335567777778875 54

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.03  E-value=0.0016  Score=62.86  Aligned_cols=69  Identities=20%  Similarity=0.211  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .+|+|.|+|+ |.+|..++..|++.|++|++.+|++++.+.+...+..             ....|+      .+++.++
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------------~~~~~~------~e~~~~a   65 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGAC-------------GAAASA------REFAGVV   65 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS-------------EEESSS------TTTTTTC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCc-------------cccCCH------HHHHhcC
Confidence            3568999986 9999999999999999999999999887777554432             223333      3457789


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+...
T Consensus        66 Dvvi~~vp~   74 (303)
T 3g0o_A           66 DALVILVVN   74 (303)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEEECCC
Confidence            999998864

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.02  E-value=0.00075  Score=65.37  Aligned_cols=68  Identities=25%  Similarity=0.233  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .+++|.|+|. |.+|..++..|++.|++|++.+|++++.+.+...+..               .  ..   ++.++++++
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~---------------~--~~---~~~e~~~~a   66 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAH---------------L--CE---SVKAALSAS   66 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCE---------------E--CS---SHHHHHHHS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe---------------e--cC---CHHHHHhcC
Confidence            3568999996 9999999999999999999999999887776554432               1  12   344567789


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+...
T Consensus        67 DvVi~~vp~   75 (306)
T 3l6d_A           67 PATIFVLLD   75 (306)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEEEeCC
Confidence            999998763

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.02  E-value=0.00079  Score=65.13  Aligned_cols=105  Identities=17%  Similarity=0.032  Sum_probs=68.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |+|.|+|| |.+|..++..|+..|+  +|+++++++.+++.    +......+       .....+...  +|    .++
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~-------~~~~~i~~t--~d----~~a   66 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI-------DKYPKIVGG--AD----YSL   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT-------TCCCEEEEE--SC----GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc-------CCCCEEEEe--CC----HHH
Confidence            68999999 9999999999999997  99999999876431    11111100       011123222  12    357


Q ss_pred             hcCcCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           79 IGNAGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++++|+||.++|..... .    ....|..-...+++.+.+.+-.-++++
T Consensus        67 ~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iiv  116 (294)
T 1oju_A           67 LKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV  116 (294)
T ss_dssp             GTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred             hCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence            89999999999865421 1    234455566777788877764444444

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.02  E-value=0.0005  Score=70.06  Aligned_cols=41  Identities=17%  Similarity=0.101  Sum_probs=36.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      |+|.|+|+ |++|..++..|++.|++|++++|++++.+.+..
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~   41 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhC
Confidence            58999995 999999999999999999999999887766643

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.00  E-value=6.2e-05  Score=72.19  Aligned_cols=35  Identities=31%  Similarity=0.452  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVPE   37 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R~   37 (427)
                      .+++|+|+|+||.+|+.+++.+++ .|++++++.+.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            356899999999999999999885 57898866543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.00  E-value=0.0018  Score=64.24  Aligned_cols=74  Identities=15%  Similarity=0.094  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ...+|+|+|+ |.+|..+++.+...|++|+++++++.+.+.+. ..+..              ...|..+.+.+.+...+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~--------------~v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD--------------SFLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS--------------EEEETTCHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc--------------eEEeccCHHHHHHhhCC
Confidence            4568999996 99999999999999999999999988766554 44443              22466677777777788


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.++|.
T Consensus       252 ~D~vid~~g~  261 (366)
T 1yqd_A          252 LDGIIDTVSA  261 (366)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCc
Confidence            9999999985

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.99  E-value=0.0028  Score=60.84  Aligned_cols=78  Identities=24%  Similarity=0.271  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ..++++|+|+ |.+|+.++..|.+.|. +|+++.|+.++++.+.......       ...+.+...++.+   +.+.+.+
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~-------~~~~~i~~~~~~~---l~~~l~~  194 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA-------VGREAVVGVDARG---IEDVIAA  194 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH-------HTSCCEEEECSTT---HHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh-------cCCceEEEcCHHH---HHHHHhc
Confidence            3578999998 8999999999999998 7999999998876664432110       1112344555544   4556778


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||++...
T Consensus       195 ~DiVInaTp~  204 (283)
T 3jyo_A          195 ADGVVNATPM  204 (283)
T ss_dssp             SSEEEECSST
T ss_pred             CCEEEECCCC
Confidence            9999998753

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.99  E-value=0.002  Score=61.56  Aligned_cols=69  Identities=16%  Similarity=0.251  Sum_probs=53.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |++++|.|+|+ |.+|+.++..|++.|+   +|++.+|++++++.+... ++.             + .   .|   ..+
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~-------------~-~---~~---~~~   59 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVH-------------T-T---QD---NRQ   59 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCE-------------E-E---SC---HHH
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCE-------------E-e---CC---hHH
Confidence            56789999998 9999999999999998   999999999877766442 221             1 1   12   345


Q ss_pred             HhcCcCEEEEccCC
Q 044905           78 AIGNAGKVVVTIGP   91 (427)
Q Consensus        78 al~g~d~Vi~~ag~   91 (427)
                      ++.++|+||.++-+
T Consensus        60 ~~~~aDvVilav~p   73 (280)
T 3tri_A           60 GALNADVVVLAVKP   73 (280)
T ss_dssp             HHSSCSEEEECSCG
T ss_pred             HHhcCCeEEEEeCH
Confidence            67899999998843

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.99  E-value=0.0029  Score=61.61  Aligned_cols=70  Identities=19%  Similarity=0.189  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH-Hh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK-AI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~-al   79 (427)
                      ..++|.|+| .|.+|..++..|.+.|+  +|++.+|++++.+.....+..            .....|+      .+ ++
T Consensus        32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~------------~~~~~~~------~~~~~   92 (314)
T 3ggo_A           32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII------------DEGTTSI------AKVED   92 (314)
T ss_dssp             SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC------------SEEESCT------TGGGG
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCc------------chhcCCH------HHHhh
Confidence            347899999 59999999999999999  999999998776655443331            0112222      34 57


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.++.+
T Consensus        93 ~~aDvVilavp~  104 (314)
T 3ggo_A           93 FSPDFVMLSSPV  104 (314)
T ss_dssp             GCCSEEEECSCG
T ss_pred             ccCCEEEEeCCH
Confidence            899999998864

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=96.98  E-value=0.00029  Score=69.54  Aligned_cols=92  Identities=18%  Similarity=0.120  Sum_probs=57.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +|++|+|.||||++|+.|++.|++++   ++++++....+.       +..+. +   ....+.+  .++ |++    .+
T Consensus         2 ~~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-------G~~~~-~---~~~~i~~--~~~-~~~----~~   63 (336)
T 2r00_A            2 QQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-------GKTYR-F---NGKTVRV--QNV-EEF----DW   63 (336)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-------TCEEE-E---TTEEEEE--EEG-GGC----CG
T ss_pred             CccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-------CCcee-e---cCceeEE--ecC-ChH----Hh
Confidence            46799999999999999999999983   678887732211       00000 0   0011122  222 121    34


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .++|+||.|.|..           .+...+..+.++|+ ++|-+|
T Consensus        64 ~~vDvVf~a~g~~-----------~s~~~a~~~~~~G~-~vId~s   96 (336)
T 2r00_A           64 SQVHIALFSAGGE-----------LSAKWAPIAAEAGV-VVIDNT   96 (336)
T ss_dssp             GGCSEEEECSCHH-----------HHHHHHHHHHHTTC-EEEECS
T ss_pred             cCCCEEEECCCch-----------HHHHHHHHHHHcCC-EEEEcC
Confidence            6899999988742           34567777788887 455444

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.97  E-value=0.00077  Score=64.44  Aligned_cols=66  Identities=23%  Similarity=0.243  Sum_probs=52.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +|+|.|+|+ |.+|+.++..|++.|++|++.+|++++.+.+...+..               .  ..   ++.+++.++|
T Consensus         1 s~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~---------------~--~~---~~~~~~~~aD   59 (287)
T 3pef_A            1 SQKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAE---------------R--AA---TPCEVVESCP   59 (287)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCE---------------E--CS---SHHHHHHHCS
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe---------------e--cC---CHHHHHhcCC
Confidence            478999996 9999999999999999999999999887777554332               1  12   3445677899


Q ss_pred             EEEEccC
Q 044905           84 KVVVTIG   90 (427)
Q Consensus        84 ~Vi~~ag   90 (427)
                      +||.+..
T Consensus        60 vvi~~vp   66 (287)
T 3pef_A           60 VTFAMLA   66 (287)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            9998875

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.95  E-value=0.00047  Score=65.96  Aligned_cols=67  Identities=22%  Similarity=0.217  Sum_probs=53.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |++|.|+|. |.+|..++..|++.||+|++.+|++++.+.+...+..             +    ..+   +.++++++|
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------------~----~~~---~~~~~~~ad   59 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGAR-------------Q----ASS---PAEVCAACD   59 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCE-------------E----CSC---HHHHHHHCS
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCe-------------e----cCC---HHHHHHcCC
Confidence            568999995 9999999999999999999999999987777654432             1    123   345667899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+...
T Consensus        60 vvi~~v~~   67 (287)
T 3pdu_A           60 ITIAMLAD   67 (287)
T ss_dssp             EEEECCSS
T ss_pred             EEEEEcCC
Confidence            99998864

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.95  E-value=0.00081  Score=64.79  Aligned_cols=66  Identities=21%  Similarity=0.133  Sum_probs=51.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +++|.|+|. |.+|..++..|++.||+|++.+|++++.+.+...+..             +    ..+   +.++++ +|
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------------~----~~~---~~~~~~-aD   72 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGAT-------------L----ADS---VADVAA-AD   72 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCE-------------E----CSS---HHHHTT-SS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCE-------------E----cCC---HHHHHh-CC
Confidence            458999995 9999999999999999999999999887777554332             1    123   445677 99


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+...
T Consensus        73 vvi~~vp~   80 (296)
T 3qha_A           73 LIHITVLD   80 (296)
T ss_dssp             EEEECCSS
T ss_pred             EEEEECCC
Confidence            99998853

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=96.95  E-value=0.0017  Score=63.74  Aligned_cols=109  Identities=17%  Similarity=0.051  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+++|.|+|| |.+|..++..|+..|+ +|++++++.++++.......+  ..... .....+...  +|   + +++.+
T Consensus        13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~--~~~~~-~~~~~i~~t--~d---~-~al~~   82 (328)
T 2hjr_A           13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNH--CMALI-GSPAKIFGE--NN---Y-EYLQN   82 (328)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHH--HHHHH-TCCCCEEEE--SC---G-GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh--Hhhcc-CCCCEEEEC--CC---H-HHHCC
Confidence            4468999998 9999999999999998 999999998765432110000  00000 001112211  22   2 46899


Q ss_pred             cCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||.++|.... +.    ....|..-...+++.+.+..-.-++
T Consensus        83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~v  127 (328)
T 2hjr_A           83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFV  127 (328)
T ss_dssp             CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEE
Confidence            9999999975432 11    1122434456667776665533343

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.95  E-value=0.0024  Score=62.33  Aligned_cols=110  Identities=16%  Similarity=0.060  Sum_probs=64.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      .++||.|+|+ |++|..++..|+..|.  +|++++.+..+++.......+ ..  +. ..++.+..   .|    .+++.
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~-~~--~~-~~~~~i~~---~~----~~a~~   73 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH-GL--PF-MGQMSLYA---GD----YSDVK   73 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT-SC--CC-TTCEEEC-----C----GGGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH-hH--Hh-cCCeEEEE---CC----HHHhC
Confidence            4578999998 9999999999999997  999999987654321111010 00  00 01122221   22    34699


Q ss_pred             CcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           81 NAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++|+||.++|.... +.    ....|......+++.+.+.+-.-+++++
T Consensus        74 ~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           74 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             CCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            99999999986542 11    1244555567778888776544455554

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.95  E-value=0.0054  Score=59.81  Aligned_cols=105  Identities=17%  Similarity=0.121  Sum_probs=66.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |+|.|+|+ |.+|+.++..|+..|.  +|+++++++.+++.    +.....-       ...+..+...|  +    ..+
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------~~~~~~v~~~~--~----~~a   66 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-------HGFDTRVTGTN--D----YGP   66 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-------HTCCCEEEEES--S----SGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-------cCCCcEEEECC--C----HHH
Confidence            68999997 9999999999999886  99999999876432    2111000       00112233222  2    246


Q ss_pred             hcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           79 IGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +.++|+||.++|.... +.    .+..|..-...+.+++.+.+-.-++++
T Consensus        67 ~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~viv  116 (314)
T 3nep_X           67 TEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIV  116 (314)
T ss_dssp             GTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred             hCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEe
Confidence            9999999999986542 11    234565566777788877764444444

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.94  E-value=0.0061  Score=59.84  Aligned_cols=111  Identities=15%  Similarity=0.106  Sum_probs=70.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +..++|.|+|+ |.+|..++..|+.+|.  +|++++++..+++.......+...+    ...-.++..  .|.    +.+
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~----~~~~~i~~~--~d~----~~~   85 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF----LKTPKIVSS--KDY----SVT   85 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG----CSCCEEEEC--SSG----GGG
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhc----cCCCeEEEc--CCH----HHh
Confidence            56789999998 9999999999999996  8999999876543321111100000    001112222  232    258


Q ss_pred             cCcCEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           80 GNAGKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +++|+||.++|.... +    ..+..|..-...+.+++.+..-.-++++
T Consensus        86 ~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlv  134 (331)
T 4aj2_A           86 ANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLI  134 (331)
T ss_dssp             TTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            999999999986543 1    1345666666777888887754434433

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.92  E-value=0.0011  Score=64.35  Aligned_cols=69  Identities=19%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc--chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL--GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .+|+|.|+|. |.+|..++..|++.|+ +|++.+|++  .+.+.+...+..               .  ..+   +.+++
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~---------------~--~~~---~~e~~   81 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVS---------------C--KAS---VAEVA   81 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCE---------------E--CSC---HHHHH
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCE---------------E--eCC---HHHHH
Confidence            4679999996 9999999999999999 999999974  454544433322               1  122   34567


Q ss_pred             cCcCEEEEccCCC
Q 044905           80 GNAGKVVVTIGPT   92 (427)
Q Consensus        80 ~g~d~Vi~~ag~~   92 (427)
                      +++|+||.+..+.
T Consensus        82 ~~aDvVi~~vp~~   94 (312)
T 3qsg_A           82 GECDVIFSLVTAQ   94 (312)
T ss_dssp             HHCSEEEECSCTT
T ss_pred             hcCCEEEEecCch
Confidence            7899999988753

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=96.91  E-value=0.0014  Score=67.20  Aligned_cols=95  Identities=8%  Similarity=0.046  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-C---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC--CCHHH-HH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-F---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF--DSAES-IA   76 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl--~D~~s-l~   76 (427)
                      +++|+|.|+ |.+|+.+++.|++++ +   .|++.+++..........+.             .++..++  .|.+. +.
T Consensus        13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~-------------~~~~~~Vdadnv~~~l~   78 (480)
T 2ph5_A           13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGV-------------SFKLQQITPQNYLEVIG   78 (480)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTC-------------EEEECCCCTTTHHHHTG
T ss_pred             CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCC-------------ceeEEeccchhHHHHHH
Confidence            467999995 999999999999874 5   68888776543221212222             2455554  45533 55


Q ss_pred             HHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           77 KAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      +++++.|+||+++-+.           ....++++|.++|+ +++  .++
T Consensus        79 aLl~~~DvVIN~s~~~-----------~~l~Im~acleaGv-~Yl--DTa  114 (480)
T 2ph5_A           79 STLEENDFLIDVSIGI-----------SSLALIILCNQKGA-LYI--NAA  114 (480)
T ss_dssp             GGCCTTCEEEECCSSS-----------CHHHHHHHHHHHTC-EEE--ESS
T ss_pred             HHhcCCCEEEECCccc-----------cCHHHHHHHHHcCC-CEE--ECC
Confidence            6777779999855332           33669999999998 444  544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.91  E-value=0.011  Score=57.94  Aligned_cols=110  Identities=12%  Similarity=0.056  Sum_probs=70.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE-EecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAV-ESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv-~gDl~D~~sl~~al   79 (427)
                      ..++|.|+|+ |.+|..++..|+..|.  +|++++++.++++.......+...+    .....++ ..|+.       .+
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~----~~~~~i~~t~d~~-------~~   87 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF----LHTAKIVSGKDYS-------VS   87 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG----SCCSEEEEESSSC-------SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc----ccCCeEEEcCCHH-------Hh
Confidence            4679999999 9999999999999996  8999999876543221100000000    0111233 23442       28


Q ss_pred             cCcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           80 GNAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +++|+||.++|.....     .....|..-...+++.+.+.+-.-++++.
T Consensus        88 ~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvv  137 (330)
T 3ldh_A           88 AGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELH  137 (330)
T ss_dssp             SSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeC
Confidence            8999999999865431     13456666667778888877655444443

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=96.91  E-value=0.00072  Score=68.23  Aligned_cols=77  Identities=14%  Similarity=0.034  Sum_probs=51.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhh--h-----hccceEEEecCCCHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKE--E-----LKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~--~-----~~rl~vv~gDl~D~~sl~~   77 (427)
                      |+|.|+|+ |++|..++..|++ |++|++++|++++.+.+...+...  ..+.  +     ..++.+    .+|   +.+
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i--~e~~l~~~~~~~~~~l~~----t~~---~~~   69 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPI--QDEYIEYYLKSKQLSIKA----TLD---SKA   69 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSS--CCHHHHHHHHHSCCCEEE----ESC---HHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCc--CCCCHHHHHHhccCcEEE----eCC---HHH
Confidence            58999997 9999999999999 999999999988777665433210  0000  0     001111    123   234


Q ss_pred             HhcCcCEEEEccCCC
Q 044905           78 AIGNAGKVVVTIGPT   92 (427)
Q Consensus        78 al~g~d~Vi~~ag~~   92 (427)
                      +++++|+||.++...
T Consensus        70 ~~~~aDvviiavpt~   84 (402)
T 1dlj_A           70 AYKEAELVIIATPTN   84 (402)
T ss_dssp             HHHHCSEEEECCCCC
T ss_pred             HhcCCCEEEEecCCC
Confidence            567899999998765

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=96.90  E-value=0.0021  Score=63.16  Aligned_cols=73  Identities=12%  Similarity=0.090  Sum_probs=56.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHHh--
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKAI--   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~al--   79 (427)
                      .+|+|+||+|.+|...++.+...|++|++++++..+.+.+...+...            ++  |..+   .+.+.+..  
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~------------~~--~~~~~~~~~~v~~~~~~  231 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH------------VL--NEKAPDFEATLREVMKA  231 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE------------EE--ETTSTTHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE------------EE--ECCcHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999998877776666541            22  3333   23344444  


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.++|.
T Consensus       232 ~g~D~vid~~g~  243 (349)
T 3pi7_A          232 EQPRIFLDAVTG  243 (349)
T ss_dssp             HCCCEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            379999999874

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=96.90  E-value=0.0012  Score=68.14  Aligned_cols=110  Identities=14%  Similarity=0.143  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhh---hh---hhh-hhhccceEEEecCCCHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASY---KI---LSK-EELKRLNAVESNFDSAESI   75 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~---~~---~~~-~~~~rl~vv~gDl~D~~sl   75 (427)
                      -.|+|.|+|+ |++|..++..|.+.|++|++++|++++.+.+...+...   .+   +.. ....++.+ .   +|   +
T Consensus         7 ~~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-t---td---~   78 (478)
T 2y0c_A            7 GSMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-S---TD---I   78 (478)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-E---CC---H
T ss_pred             CCceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-E---CC---H
Confidence            3689999996 99999999999999999999999988877765432100   00   000 00011211 1   23   3


Q ss_pred             HHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHH-cCCCeEE
Q 044905           76 AKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL-AGVGHVA  121 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~-~gVk~~V  121 (427)
                      .+++.++|+||.+++.... .....++.....+++.... ..-..+|
T Consensus        79 ~~a~~~aDvviiaVptp~~-~~~~~dl~~v~~v~~~i~~~l~~~~iV  124 (478)
T 2y0c_A           79 EAAVAHGDVQFIAVGTPPD-EDGSADLQYVLAAARNIGRYMTGFKVI  124 (478)
T ss_dssp             HHHHHHCSEEEECCCCCBC-TTSSBCCHHHHHHHHHHHHHCCSCEEE
T ss_pred             HHHhhcCCEEEEEeCCCcc-cCCCccHHHHHHHHHHHHHhcCCCCEE
Confidence            3467789999998875321 1123333344555554433 2333444

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.89  E-value=0.0018  Score=63.39  Aligned_cols=109  Identities=13%  Similarity=0.087  Sum_probs=64.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+++|.|+|| |.+|..++..|+..|+ +|++++++..+++........  ..... .....+...  +|   + +++.+
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~--~~~~~-~~~~~i~~t--~d---~-~al~~   72 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH--TNVMA-YSNCKVSGS--NT---Y-DDLAG   72 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT--HHHHH-TCCCCEEEE--CC---G-GGGTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh--hhhhc-CCCcEEEEC--CC---H-HHhCC
Confidence            4579999998 9999999999999997 999999988765432111110  00000 111122221  22   2 46899


Q ss_pred             cCEEEEccCCCCC-CC---------CccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTED-GP---------TSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-~~---------~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||.++|.... +.         ....|..-...+.+.+.+..-.-++
T Consensus        73 aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~i  122 (322)
T 1t2d_A           73 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFI  122 (322)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred             CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEE
Confidence            9999999975432 11         1122333445666666666533333

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=96.89  E-value=0.0014  Score=56.57  Aligned_cols=83  Identities=20%  Similarity=0.258  Sum_probs=56.7

Q ss_pred             CCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCc--chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            4 SGTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPEL--GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         4 ~~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +++|+|.|+|   |..|..+++.|++.||+|+.+.++.  ...     .|.              -+..++.|      +
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~--------------~~~~sl~e------l   67 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQ--------------QGYATLAD------V   67 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTE--------------ECCSSTTT------C
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCe--------------eccCCHHH------c
Confidence            5689999998   8999999999999999987776654  221     111              11123332      2


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                      ...+|+++.+..+.           .+..+++.|.+.|++.+++
T Consensus        68 ~~~~Dlvii~vp~~-----------~v~~v~~~~~~~g~~~i~i  100 (145)
T 2duw_A           68 PEKVDMVDVFRNSE-----------AAWGVAQEAIAIGAKTLWL  100 (145)
T ss_dssp             SSCCSEEECCSCST-----------HHHHHHHHHHHHTCCEEEC
T ss_pred             CCCCCEEEEEeCHH-----------HHHHHHHHHHHcCCCEEEE
Confidence            35789999877531           4455777777789988653

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.87  E-value=0.0019  Score=63.03  Aligned_cols=108  Identities=15%  Similarity=0.138  Sum_probs=66.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhh--hccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEE--LKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~--~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++++|.|+|+ |.+|..++..|+..|.  +|++++++..+++.....     +.+...  ...+.+.. |  +    .++
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~d-----l~~~~~~~~~~~~i~~-~--~----~~a   71 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMD-----FNHGKVFAPKPVDIWH-G--D----YDD   71 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-----HHHHTTSSSSCCEEEE-C--C----GGG
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhh-----HHHHhhhcCCCeEEEc-C--c----HHH
Confidence            5579999999 9999999999988874  899999987643322111     111100  01223332 2  2    246


Q ss_pred             hcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           79 IGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +.++|+||.+++......     ....|..-...+++.+.+..-..++++
T Consensus        72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv  121 (316)
T 1ldn_A           72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (316)
T ss_dssp             TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEE
Confidence            899999999998654321     123344445567777777654444444

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=96.86  E-value=0.0018  Score=64.64  Aligned_cols=90  Identities=12%  Similarity=0.033  Sum_probs=56.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-CCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLR-EGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~-~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |++|.|.||||++|+.|++.|+. +++   +++.+..+ +.-..+.       .+     ....+...+..|++.    +
T Consensus         1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~-s~G~~v~-------~~-----~g~~i~~~~~~~~~~----~   63 (367)
T 1t4b_A            1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS-QLGQAAP-------SF-----GGTTGTLQDAFDLEA----L   63 (367)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-STTSBCC-------GG-----GTCCCBCEETTCHHH----H
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeC-CCCCCcc-------cc-----CCCceEEEecCChHH----h
Confidence            57999999999999999995554 543   56666654 2111110       00     001233345556554    3


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .++|+||.|.|..           .+..+...+.++|++.+|
T Consensus        64 ~~~DvVf~a~g~~-----------~s~~~a~~~~~~G~k~vV   94 (367)
T 1t4b_A           64 KALDIIVTCQGGD-----------YTNEIYPKLRESGWQGYW   94 (367)
T ss_dssp             HTCSEEEECSCHH-----------HHHHHHHHHHHTTCCCEE
T ss_pred             cCCCEEEECCCch-----------hHHHHHHHHHHCCCCEEE
Confidence            5899999998732           446677778888986443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.86  E-value=0.0093  Score=58.03  Aligned_cols=108  Identities=15%  Similarity=0.072  Sum_probs=65.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-C--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-G--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |||.|+||+|++|..++..|..+ +  .++++++++. +....     ...+.+..  ....+....-++   ...++++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~-----a~Dl~~~~--~~~~v~~~~~~~---~~~~~~~   69 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGV-----AVDLSHIP--TAVKIKGFSGED---ATPALEG   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHH-----HHHHHTSC--SSEEEEEECSSC---CHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhH-----HHHhhCCC--CCceEEEecCCC---cHHHhCC
Confidence            68999999999999999999875 5  5899998876 22111     00000000  011122110011   2457899


Q ss_pred             cCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||.++|.... +.    .++.|......+.+++.+.+-+-++++
T Consensus        70 aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlv  116 (312)
T 3hhp_A           70 ADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGI  116 (312)
T ss_dssp             CSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            9999999986543 11    235566666778888877764444444

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.84  E-value=0.0011  Score=67.42  Aligned_cols=79  Identities=20%  Similarity=0.180  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhh--h-----hccceEEEecCCCHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKE--E-----LKRLNAVESNFDSAES   74 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~--~-----~~rl~vv~gDl~D~~s   74 (427)
                      +.+|+|.|+|+ |++|..++..|.+ |++|++++|++++.+.+... .. .+..+.  +     ..++.+ .   +|   
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g-~~-~i~e~~l~~ll~~~~~~l~~-t---td---  102 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQK-IS-PIVDKEIQEYLAEKPLNFRA-T---TD---  102 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTT-CC-SSCCHHHHHHHHHSCCCEEE-E---SC---
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhcc-CC-ccccccHHHHHhhccCCeEE-E---cC---
Confidence            45679999996 9999999998877 99999999999877766431 10 000000  0     001111 1   12   


Q ss_pred             HHHHhcCcCEEEEccCC
Q 044905           75 IAKAIGNAGKVVVTIGP   91 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~   91 (427)
                      +.++++++|+||.++..
T Consensus       103 ~~ea~~~aDvViiaVPt  119 (432)
T 3pid_A          103 KHDAYRNADYVIIATPT  119 (432)
T ss_dssp             HHHHHTTCSEEEECCCC
T ss_pred             HHHHHhCCCEEEEeCCC
Confidence            45678899999998764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=96.83  E-value=0.0029  Score=61.85  Aligned_cols=74  Identities=20%  Similarity=0.066  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      ...+|+|+|+ |.+|..+++.+...|++|++++|++.+.+.+...+..             . ..|..+.   +.+.+..
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~-------------~-~~d~~~~~~~~~~~~~~  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD-------------L-VVNPLKEDAAKFMKEKV  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS-------------E-EECTTTSCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC-------------E-EecCCCccHHHHHHHHh
Confidence            3468999999 7799999999999999999999998877666555543             1 2355432   3444444


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.++|.
T Consensus       229 ~~~d~vid~~g~  240 (339)
T 1rjw_A          229 GGVHAAVVTAVS  240 (339)
T ss_dssp             SSEEEEEESSCC
T ss_pred             CCCCEEEECCCC
Confidence            689999999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.82  E-value=0.0037  Score=62.08  Aligned_cols=74  Identities=19%  Similarity=0.098  Sum_probs=58.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +..+|||+|+ |.+|...++.+...|++|+++++++.+.+.+...+..              ...|..+.+.+.+...++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~--------------~vi~~~~~~~~~~~~~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD--------------EVVNSRNADEMAAHLKSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS--------------EEEETTCHHHHHTTTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc--------------EEeccccHHHHHHhhcCC
Confidence            3468999998 8899999999999999999999999887777666654              123566666555555789


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999985

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.80  E-value=0.0017  Score=60.78  Aligned_cols=38  Identities=26%  Similarity=0.323  Sum_probs=33.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA   40 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~   40 (427)
                      ...++|.|+|+ |.+|+.++..|++.|++|++.+|++++
T Consensus        17 ~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           17 FQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            45789999985 999999999999999999999999865

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.78  E-value=0.0084  Score=58.00  Aligned_cols=107  Identities=19%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.|+|| |.+|..++..|+..|+  +|++++++..++........+ .  .+. .....+...   |    .+++.++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~-~--~~~-~~~~~i~~~---~----~~a~~~a   68 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAH-A--APV-SHGTRVWHG---G----HSELADA   68 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTT-S--CCT-TSCCEEEEE---C----GGGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhh-h--hhh-cCCeEEEEC---C----HHHhCCC
Confidence            58999998 9999999999999998  999999987654322111100 0  000 012222222   2    2468999


Q ss_pred             CEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||.+++.... +    .....|......+++.+.+.+-..++++
T Consensus        69 DvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~  114 (304)
T 2v6b_A           69 QVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV  114 (304)
T ss_dssp             SEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             CEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE
Confidence            999999975432 1    1233455555677777776654434433

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.77  E-value=0.0015  Score=61.25  Aligned_cols=68  Identities=19%  Similarity=0.205  Sum_probs=51.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +||+|.|+|+ |.+|+.++..|++.|+.|++.+|++++.+.+... +..             +    ..|   +.+++.+
T Consensus         2 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~-------------~----~~~---~~~~~~~   60 (259)
T 2ahr_A            2 NAMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALP-------------Y----AMS---HQDLIDQ   60 (259)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCC-------------B----CSS---HHHHHHT
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCE-------------e----eCC---HHHHHhc
Confidence            5689999995 9999999999999999999999998776655432 221             1    223   3345678


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.+..+
T Consensus        61 ~D~Vi~~v~~   70 (259)
T 2ahr_A           61 VDLVILGIKP   70 (259)
T ss_dssp             CSEEEECSCG
T ss_pred             CCEEEEEeCc
Confidence            9999998863

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.76  E-value=0.012  Score=56.88  Aligned_cols=108  Identities=16%  Similarity=0.188  Sum_probs=63.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHH--HH-HHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQE--LA-RLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~--l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      .++|+|+|+|+ |.+|..++..|+..|+  +|++++|+..++..  +. ..+..  +.     ....+...  +|.    
T Consensus         5 ~~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~--~~-----~~~~v~~~--~~~----   70 (319)
T 1lld_A            5 VKPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--FY-----PTVSIDGS--DDP----   70 (319)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--GS-----TTCEEEEE--SCG----
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh--hc-----CCeEEEeC--CCH----
Confidence            34679999998 9999999999999998  99999998755431  11 11111  00     11122222  122    


Q ss_pred             HHhcCcCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           77 KAIGNAGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      .++.++|+||.+++..... .    ....|......+++.+...+-..+|++
T Consensus        71 ~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~  122 (319)
T 1lld_A           71 EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  122 (319)
T ss_dssp             GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence            3578999999999754321 1    111223333456666655443444433

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=96.75  E-value=0.0048  Score=60.85  Aligned_cols=72  Identities=15%  Similarity=0.121  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al~   80 (427)
                      ...++|.|+|. |.+|..++..|.+.|++|++.+|+++..+.....++.             .    ..|. +.+..+.+
T Consensus         6 ~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~-------------~----~~~~~e~~~~a~~   67 (341)
T 3ktd_A            6 DISRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFD-------------V----SADLEATLQRAAA   67 (341)
T ss_dssp             CCSSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCC-------------E----ESCHHHHHHHHHH
T ss_pred             CCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCe-------------e----eCCHHHHHHhccc
Confidence            34578999995 9999999999999999999999998776655443332             1    1343 34455667


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.++.+
T Consensus        68 ~aDlVilavP~   78 (341)
T 3ktd_A           68 EDALIVLAVPM   78 (341)
T ss_dssp             TTCEEEECSCH
T ss_pred             CCCEEEEeCCH
Confidence            89999988753

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=96.75  E-value=0.0033  Score=64.25  Aligned_cols=48  Identities=23%  Similarity=0.212  Sum_probs=42.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS   50 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~   50 (427)
                      ...+|+|+||+|.+|...++.+...|++|+++++++.+.+.+...|.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~  275 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAE  275 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCc
Confidence            345899999999999999999999999999999988887777777765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=96.75  E-value=0.0025  Score=64.80  Aligned_cols=48  Identities=21%  Similarity=0.174  Sum_probs=41.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS   50 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~   50 (427)
                      ...+|+|+||+|.+|...++.+...|.+|++++++..+.+.+...+..
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~  267 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCD  267 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCC
Confidence            346899999999999999999999999999999988877777666654

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=96.72  E-value=0.0021  Score=55.32  Aligned_cols=82  Identities=17%  Similarity=0.204  Sum_probs=55.0

Q ss_pred             CCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++|+|.|+|   |.+|..+++.|++.||+|+.+.....   ++  .|.              -+..++      .++..
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~---~i--~G~--------------~~y~sl------~~l~~   76 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYE---EV--LGR--------------KCYPSV------LDIPD   76 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCS---EE--TTE--------------ECBSSG------GGCSS
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCC---eE--CCe--------------eccCCH------HHcCC
Confidence            5789999998   89999999999999998766644321   11  011              111122      22234


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .+|.++.+..+           ..+..+++.|...|++.++
T Consensus        77 ~vDlvvi~vp~-----------~~~~~vv~~~~~~gi~~i~  106 (144)
T 2d59_A           77 KIEVVDLFVKP-----------KLTMEYVEQAIKKGAKVVW  106 (144)
T ss_dssp             CCSEEEECSCH-----------HHHHHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEEeCH-----------HHHHHHHHHHHHcCCCEEE
Confidence            68999887643           1456688888889998665

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=96.72  E-value=0.00094  Score=66.33  Aligned_cols=81  Identities=16%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .+|+|.|+|+ |.+|..++..|.+.|++|++.+|+++..+.+...+.....+     +.+.+ ...+.-..++.+++.++
T Consensus        28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l-----~g~~l-~~~i~~t~d~~ea~~~a  100 (356)
T 3k96_A           28 FKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYL-----PNYPF-PETLKAYCDLKASLEGV  100 (356)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTB-----TTCCC-CTTEEEESCHHHHHTTC
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccC-----CCCcc-CCCeEEECCHHHHHhcC
Confidence            3578999997 99999999999999999999999988777665543221110     01110 00000011245678899


Q ss_pred             CEEEEccC
Q 044905           83 GKVVVTIG   90 (427)
Q Consensus        83 d~Vi~~ag   90 (427)
                      |+||.++.
T Consensus       101 DvVilaVp  108 (356)
T 3k96_A          101 TDILIVVP  108 (356)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99998774

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=96.72  E-value=0.0037  Score=61.32  Aligned_cols=75  Identities=13%  Similarity=0.135  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHHh-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKAI-   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~al-   79 (427)
                      ...+|+|+||+|.+|...++.+...|++|+++++++.+.+.+...+...            ++  |..+  .+.+.+.. 
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~------------vi--~~~~~~~~~~~~~~~  215 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADI------------VL--NHKESLLNQFKTQGI  215 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSE------------EE--CTTSCHHHHHHHHTC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE------------EE--ECCccHHHHHHHhCC
Confidence            4568999999999999999999999999999999988877776666641            22  3222  23344332 


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.++|.
T Consensus       216 ~g~Dvv~d~~g~  227 (346)
T 3fbg_A          216 ELVDYVFCTFNT  227 (346)
T ss_dssp             CCEEEEEESSCH
T ss_pred             CCccEEEECCCc
Confidence            268999998873

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.70  E-value=0.006  Score=62.96  Aligned_cols=77  Identities=12%  Similarity=0.179  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+|+|.|+|. |.+|..++..|++.||+|++.+|++++.+.+...+..-          ..+..  ..+.+.+.+.+++
T Consensus         2 ~~~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g----------~~i~~--~~s~~e~v~~l~~   68 (484)
T 4gwg_A            2 NAQADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG----------TKVVG--AQSLKEMVSKLKK   68 (484)
T ss_dssp             -CCBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTT----------SSCEE--CSSHHHHHHTBCS
T ss_pred             CCCCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCC----------Cceec--cCCHHHHHhhccC
Confidence            56789999996 99999999999999999999999998877765532210          00111  1344444444556


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.++..
T Consensus        69 aDvVil~Vp~   78 (484)
T 4gwg_A           69 PRRIILLVKA   78 (484)
T ss_dssp             SCEEEECSCS
T ss_pred             CCEEEEecCC
Confidence            7877776654

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=96.70  E-value=0.0024  Score=63.23  Aligned_cols=71  Identities=17%  Similarity=0.243  Sum_probs=53.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc---chHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL---GAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~---~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~a   78 (427)
                      ..+|+|+|+ |.+|..+++.+...|++|++++|+.   ++.+.+...+.+             .+  | .+  .+.+.+.
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~-------------~v--~-~~~~~~~~~~~  243 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTN-------------YY--N-SSNGYDKLKDS  243 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCE-------------EE--E-CTTCSHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCc-------------ee--c-hHHHHHHHHHh
Confidence            679999999 9999999999999999999999998   666555555543             33  4 43  1233332


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      -.++|+||.++|.
T Consensus       244 ~~~~d~vid~~g~  256 (366)
T 2cdc_A          244 VGKFDVIIDATGA  256 (366)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2579999999985

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=96.69  E-value=0.0053  Score=59.77  Aligned_cols=69  Identities=17%  Similarity=0.334  Sum_probs=50.8

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG----FSVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESI   75 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl   75 (427)
                      |++|+|.|+|+ |.+|..++..|++.|    ++|++..|+++  +.+.+...+..              +..   +   .
T Consensus        20 ~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~--------------~~~---~---~   78 (322)
T 2izz_A           20 FQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVK--------------LTP---H---N   78 (322)
T ss_dssp             --CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCE--------------EES---C---H
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCE--------------EeC---C---h
Confidence            45678999997 999999999999999    89999999986  55665443332              111   2   2


Q ss_pred             HHHhcCcCEEEEccCC
Q 044905           76 AKAIGNAGKVVVTIGP   91 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~   91 (427)
                      .+++.++|+||.++.+
T Consensus        79 ~e~~~~aDvVilav~~   94 (322)
T 2izz_A           79 KETVQHSDVLFLAVKP   94 (322)
T ss_dssp             HHHHHHCSEEEECSCG
T ss_pred             HHHhccCCEEEEEeCH
Confidence            3456789999998853

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.69  E-value=0.0035  Score=60.45  Aligned_cols=70  Identities=19%  Similarity=0.329  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|+|+ |.+|+.+++.|...|++|++.+|++.+...+...+.+             .+  +   .+++.+.++++
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~-------------~~--~---~~~l~~~l~~a  216 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLV-------------PF--H---TDELKEHVKDI  216 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCE-------------EE--E---GGGHHHHSTTC
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCe-------------EE--c---hhhHHHHhhCC
Confidence            3578999997 9999999999999999999999998655444332221             22  1   23466778999


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||+++..
T Consensus       217 DvVi~~~p~  225 (300)
T 2rir_A          217 DICINTIPS  225 (300)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999998875

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.68  E-value=0.0028  Score=62.15  Aligned_cols=73  Identities=16%  Similarity=0.160  Sum_probs=54.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~al   79 (427)
                      ..+|+|+|+ |.+|..+++.+...|+ +|++++|++.+.+.+...+...            +  .|..+   .+.+.+..
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~------------~--~~~~~~~~~~~v~~~~  232 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY------------V--INPFEEDVVKEVMDIT  232 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE------------E--ECTTTSCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE------------E--ECCCCcCHHHHHHHHc
Confidence            358999999 9999999999999999 9999999987776666656541            2  24433   23344443


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|+||.++|.
T Consensus       233 ~g~g~D~vid~~g~  246 (348)
T 2d8a_A          233 DGNGVDVFLEFSGA  246 (348)
T ss_dssp             TTSCEEEEEECSCC
T ss_pred             CCCCCCEEEECCCC
Confidence            3  69999999884

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.68  E-value=0.013  Score=56.97  Aligned_cols=108  Identities=19%  Similarity=0.070  Sum_probs=68.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |||.|+|| |++|..++..|+..+  .+|++++++.++++.......+.   .+. ..++.+.. +  +    .+++.++
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~---~~~-~~~~~v~~-~--~----~~a~~~a   68 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHA---TPF-AHPVWVWA-G--S----YGDLEGA   68 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTT---GGG-SCCCEEEE-C--C----GGGGTTE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHh---Hhh-cCCeEEEE-C--C----HHHhCCC
Confidence            58999998 999999999999987  68999999876554321111110   000 12233333 2  3    3469999


Q ss_pred             CEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |+||.++|.... +.    ....|......+++.+.+.+-.-++++.
T Consensus        69 D~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  115 (310)
T 2xxj_A           69 RAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA  115 (310)
T ss_dssp             EEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence            999999986543 11    1234445566777777777655455443

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.68  E-value=0.0036  Score=60.73  Aligned_cols=109  Identities=17%  Similarity=0.051  Sum_probs=64.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.|+|+ |.+|..++..|...  |++|+++++++.+++.+.....+ . .... .....+...  +|.+    .+.++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~-~-~~~~-~~~~~i~~t--~d~~----~l~~a   70 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE-S-GPVG-LFDTKVTGS--NDYA----DTANS   70 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHT-T-HHHH-TCCCEEEEE--SCGG----GGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHh-h-hhcc-cCCcEEEEC--CCHH----HHCCC
Confidence            58999998 99999999999985  79999999998766543211000 0 0000 001112111  2322    37899


Q ss_pred             CEEEEccCCCCCCCC-----ccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTEDGPT-----SEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~-----~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||.+++.......     ...|..-...+++.+.+.+-..++++
T Consensus        71 DvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv  116 (310)
T 1guz_A           71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (310)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            999999985432111     11333445567777766654444433

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=96.67  E-value=0.0086  Score=57.89  Aligned_cols=109  Identities=16%  Similarity=0.113  Sum_probs=65.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ||+|.|+| +|.+|..++..|+..|  ++|++++|++++++.+.....+  ... ....++.+...   |.    +++.+
T Consensus         1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~--~~~-~~~~~~~~~~~---d~----~~~~~   69 (309)
T 1hyh_A            1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQD--AMA-NLEAHGNIVIN---DW----AALAD   69 (309)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH--HGG-GSSSCCEEEES---CG----GGGTT
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHh--hhh-hcCCCeEEEeC---CH----HHhCC
Confidence            47999999 5999999999999999  8999999998766544321110  000 00011222222   32    35789


Q ss_pred             cCEEEEccCCCC-----CCC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTE-----DGP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~-----~~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||.+++...     .+.    ....|......+++.+....-..++++
T Consensus        70 aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~  120 (309)
T 1hyh_A           70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (309)
T ss_dssp             CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            999999998643     111    122333344566777666554444433

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=96.67  E-value=0.0048  Score=60.44  Aligned_cols=74  Identities=23%  Similarity=0.240  Sum_probs=54.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~-   80 (427)
                      ...+|||+||+|.+|..+++.+...|++|+++ +++.+.+.+...+..             .+. +-.| .+.+.+... 
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~-------------~i~-~~~~~~~~~~~~~~~  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGAT-------------PID-ASREPEDYAAEHTAG  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSE-------------EEE-TTSCHHHHHHHHHTT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCC-------------Eec-cCCCHHHHHHHHhcC
Confidence            34689999999999999999999999999998 777776666665654             222 2223 234444443 


Q ss_pred             -CcCEEEEccCC
Q 044905           81 -NAGKVVVTIGP   91 (427)
Q Consensus        81 -g~d~Vi~~ag~   91 (427)
                       ++|+||.++|.
T Consensus       215 ~g~D~vid~~g~  226 (343)
T 3gaz_A          215 QGFDLVYDTLGG  226 (343)
T ss_dssp             SCEEEEEESSCT
T ss_pred             CCceEEEECCCc
Confidence             69999999883

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.66  E-value=0.00088  Score=63.86  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=51.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++++|+|+ |.+|+.++..|++.|++|++..|+.++++.+......+        ..  +...|+.   .+..  .++
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--------~~--~~~~~~~---~~~~--~~~  181 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------GN--IQAVSMD---SIPL--QTY  181 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------SC--EEEEEGG---GCCC--SCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--------CC--eEEeeHH---Hhcc--CCC
Confidence            4578999998 88999999999999999999999998777665432110        01  2223331   1100  379


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+||++++..
T Consensus       182 DivIn~t~~~  191 (272)
T 1p77_A          182 DLVINATSAG  191 (272)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEECCCCC
Confidence            9999998864

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=96.66  E-value=0.005  Score=58.63  Aligned_cols=71  Identities=13%  Similarity=0.204  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |++|+|.|+| .|.+|+.++..|.+.  |++|++.+|++++.+.+...+..            .....|+      ..++
T Consensus         4 M~~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~~~~------~~~~   64 (290)
T 3b1f_A            4 MEEKTIYIAG-LGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIV------------DEATADF------KVFA   64 (290)
T ss_dssp             GCCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSC------------SEEESCT------TTTG
T ss_pred             cccceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCc------------ccccCCH------HHhh
Confidence            5678999999 599999999999988  68999999998766655433221            0122232      2346


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.++.+
T Consensus        65 ~~aDvVilavp~   76 (290)
T 3b1f_A           65 ALADVIILAVPI   76 (290)
T ss_dssp             GGCSEEEECSCH
T ss_pred             cCCCEEEEcCCH
Confidence            789999998864

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.65  E-value=0.0032  Score=62.94  Aligned_cols=75  Identities=19%  Similarity=0.226  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec--------C-----
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN--------F-----   69 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD--------l-----   69 (427)
                      ...+|+|+|+ |-+|..+++.|...|.+|++++|++.+++.+...|.+             ++..+        .     
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~-------------~~~l~~~~~~~~gya~~~~  248 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQ-------------WLDLGIDAAGEGGYARELS  248 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCE-------------ECCCC-------------C
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCe-------------EEeccccccccccchhhhh
Confidence            3568999998 9999999999999999999999999887777665554             22111        0     


Q ss_pred             -----CCHHHHHHHhcCcCEEEEccCC
Q 044905           70 -----DSAESIAKAIGNAGKVVVTIGP   91 (427)
Q Consensus        70 -----~D~~sl~~al~g~d~Vi~~ag~   91 (427)
                           .+.+.+.+++.++|+||.++..
T Consensus       249 ~~~~~~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          249 EAERAQQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred             HHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence                 1245788889999999988743

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.65  E-value=0.0028  Score=62.57  Aligned_cols=73  Identities=12%  Similarity=0.007  Sum_probs=55.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al~g~   82 (427)
                      ..+|+|+|+ |.+|..+++.+...|++|+++++++.+.+.+...+...            ++  |..+. +.......++
T Consensus       180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~------------v~--~~~~~~~~~~~~~~~~  244 (360)
T 1piw_A          180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH------------YI--ATLEEGDWGEKYFDTF  244 (360)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE------------EE--EGGGTSCHHHHSCSCE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCE------------EE--cCcCchHHHHHhhcCC
Confidence            468999999 99999999999989999999999998877776666541            22  33333 2233333589


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.++|.
T Consensus       245 D~vid~~g~  253 (360)
T 1piw_A          245 DLIVVCASS  253 (360)
T ss_dssp             EEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999986

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=96.65  E-value=0.0015  Score=65.16  Aligned_cols=91  Identities=21%  Similarity=0.183  Sum_probs=54.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++|+|.||||++|..|++.|.+++|   +++.+..+.+.-+.+.-.+           .  +...-++.. +    .+.
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~-----------~--~~~~~~~~~-~----~~~   63 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKD-----------Q--DITIEETTE-T----AFE   63 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETT-----------E--EEEEEECCT-T----TTT
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecC-----------C--CceEeeCCH-H----Hhc
Confidence            46899999999999999999888765   4555553322111110000           0  122222221 1    257


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++|+||.|++..           .+..+...+...|+ ++|-+|
T Consensus        64 ~~Dvvf~a~~~~-----------~s~~~a~~~~~~G~-~vIDlS   95 (366)
T 3pwk_A           64 GVDIALFSAGSS-----------TSAKYAPYAVKAGV-VVVDNT   95 (366)
T ss_dssp             TCSEEEECSCHH-----------HHHHHHHHHHHTTC-EEEECS
T ss_pred             CCCEEEECCChH-----------hHHHHHHHHHHCCC-EEEEcC
Confidence            899999988642           34567777777887 455344

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.64  E-value=0.0066  Score=57.51  Aligned_cols=69  Identities=22%  Similarity=0.234  Sum_probs=50.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      |++|.|+|+ |.+|+.++..|.+.|+  +|++.+|++++.+.+...+..            ....   .|   +..++. 
T Consensus         1 m~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~------------~~~~---~~---~~~~~~~   61 (281)
T 2g5c_A            1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII------------DEGT---TS---IAKVEDF   61 (281)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC------------SEEE---SC---GGGGGGT
T ss_pred             CcEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCc------------cccc---CC---HHHHhcC
Confidence            468999995 9999999999999998  999999998766554433321            0111   12   224577 


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.++.+
T Consensus        62 ~aDvVilavp~   72 (281)
T 2g5c_A           62 SPDFVMLSSPV   72 (281)
T ss_dssp             CCSEEEECSCH
T ss_pred             CCCEEEEcCCH
Confidence            89999998764

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.64  E-value=0.0013  Score=62.83  Aligned_cols=66  Identities=15%  Similarity=0.202  Sum_probs=50.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+|+ |.+|+.++..|++.|++|++++|++++.+.+...+..              +   ..|   +.+++.++|+
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~--------------~---~~~---~~~~~~~~D~   64 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAE--------------T---AST---AKAIAEQCDV   64 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE--------------E---CSS---HHHHHHHCSE
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCe--------------e---cCC---HHHHHhCCCE
Confidence            68999995 9999999999999999999999998776665443321              1   123   3345677999


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.+...
T Consensus        65 vi~~v~~   71 (299)
T 1vpd_A           65 IITMLPN   71 (299)
T ss_dssp             EEECCSS
T ss_pred             EEEECCC
Confidence            9998863

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=96.64  E-value=0.0059  Score=63.01  Aligned_cols=76  Identities=12%  Similarity=0.222  Sum_probs=52.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.+++|.|+|+ |.+|+.++..|++.|++|++..|++++.+.+......         .+  +..  ..|.+.+.+.++.
T Consensus        13 ~~~~~IgvIGl-G~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~---------~g--i~~--~~s~~e~v~~l~~   78 (480)
T 2zyd_A           13 MSKQQIGVVGM-AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPG---------KK--LVP--YYTVKEFVESLET   78 (480)
T ss_dssp             --CBSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTT---------SC--EEE--CSSHHHHHHTBCS
T ss_pred             cCCCeEEEEcc-HHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCC---------CC--eEE--eCCHHHHHhCCCC
Confidence            56778999997 9999999999999999999999998877766442100         00  111  1344433333344


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.++.+
T Consensus        79 aDvVil~Vp~   88 (480)
T 2zyd_A           79 PRRILLMVKA   88 (480)
T ss_dssp             SCEEEECSCS
T ss_pred             CCEEEEECCC
Confidence            9999998865

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.63  E-value=0.0054  Score=58.00  Aligned_cols=67  Identities=13%  Similarity=0.110  Sum_probs=49.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|++++.+.+...+..            ..+.   .|.   ..+ .++|+
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~------------~~~~---~~~---~~~-~~~D~   60 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLV------------DEAG---QDL---SLL-QTAKI   60 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSC------------SEEE---SCG---GGG-TTCSE
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCC------------cccc---CCH---HHh-CCCCE
Confidence            58999995 9999999999999999999999998776655432221            0111   222   234 78999


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.++.+
T Consensus        61 vi~av~~   67 (279)
T 2f1k_A           61 IFLCTPI   67 (279)
T ss_dssp             EEECSCH
T ss_pred             EEEECCH
Confidence            9998864

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.63  E-value=0.0025  Score=61.77  Aligned_cols=74  Identities=16%  Similarity=0.176  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +..+|+|+||+|.+|...++.+...|.+|++++++. +.+.+...|.+              ...|..+.+.+.+.+.++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lGa~--------------~~i~~~~~~~~~~~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALGAE--------------QCINYHEEDFLLAISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHTCS--------------EEEETTTSCHHHHCCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcCCC--------------EEEeCCCcchhhhhccCC
Confidence            346899999999999999999999999999988543 34555555554              123555544466667899


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.++|.
T Consensus       217 D~v~d~~g~  225 (321)
T 3tqh_A          217 DAVIDLVGG  225 (321)
T ss_dssp             EEEEESSCH
T ss_pred             CEEEECCCc
Confidence            999999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=96.62  E-value=0.0085  Score=59.38  Aligned_cols=73  Identities=18%  Similarity=0.202  Sum_probs=52.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH--hcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA--IGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a--l~g   81 (427)
                      ..+|+|+||+|.+|..+++.+...|++|++++ +..+.+.+...|.+.            +  .|..+.+.....  ..+
T Consensus       184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~------------v--~~~~~~~~~~~~~~~~g  248 (375)
T 2vn8_A          184 GKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADD------------V--IDYKSGSVEEQLKSLKP  248 (375)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSE------------E--EETTSSCHHHHHHTSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCCE------------E--EECCchHHHHHHhhcCC
Confidence            46899999999999999999999999999988 455555555555541            2  244432222222  257


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.++|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=96.62  E-value=0.0015  Score=67.41  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=37.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcchHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELGAAQELA   45 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~~~~~l~   45 (427)
                      +++|+|.|+|+ |++|..++..|.+.  |++|++++|++++.+.+.
T Consensus         7 ~~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~   51 (481)
T 2o3j_A            7 GKVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWN   51 (481)
T ss_dssp             CCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHH
Confidence            34579999996 99999999999998  799999999988777664

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.62  E-value=0.0045  Score=59.50  Aligned_cols=70  Identities=20%  Similarity=0.326  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|+|+ |.+|+.+++.|...|++|++.+|++.+...+...+..             .+  +   .+++.+++.++
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------------~~--~---~~~l~~~l~~a  214 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGME-------------PF--H---ISKAAQELRDV  214 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSE-------------EE--E---GGGHHHHTTTC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCe-------------ec--C---hhhHHHHhcCC
Confidence            4579999996 9999999999999999999999998654444332222             22  2   23466778999


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+|++++..
T Consensus       215 DvVi~~~p~  223 (293)
T 3d4o_A          215 DVCINTIPA  223 (293)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999998854

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=96.60  E-value=0.0021  Score=66.22  Aligned_cols=44  Identities=20%  Similarity=0.141  Sum_probs=39.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CC-eEEEEecCcc----hHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GF-SVRAGVPELG----AAQELAR   46 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~-~V~al~R~~~----~~~~l~~   46 (427)
                      +++|+|.|+|+ |++|..++..|++. || +|++++|+++    +.+.+..
T Consensus        16 ~~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~   65 (478)
T 3g79_A           16 GPIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNR   65 (478)
T ss_dssp             CSCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTT
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHh
Confidence            56789999996 99999999999999 99 9999999998    7766643

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=96.60  E-value=0.0039  Score=59.70  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=52.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++++|+|+ |.+|+.++..|++.| +|++..|+.++++.+........      .... .+.+|+.|   +.+.+.++
T Consensus       127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~------~~~~-~~~~d~~~---~~~~~~~~  194 (287)
T 1nvt_A          127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL------NKKF-GEEVKFSG---LDVDLDGV  194 (287)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH------TCCH-HHHEEEEC---TTCCCTTC
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc------cccc-ceeEEEee---HHHhhCCC
Confidence            4578999998 599999999999999 99999999877665543211100      0000 01122222   13456789


Q ss_pred             CEEEEccCCCC
Q 044905           83 GKVVVTIGPTE   93 (427)
Q Consensus        83 d~Vi~~ag~~~   93 (427)
                      |+||++++...
T Consensus       195 DilVn~ag~~~  205 (287)
T 1nvt_A          195 DIIINATPIGM  205 (287)
T ss_dssp             CEEEECSCTTC
T ss_pred             CEEEECCCCCC
Confidence            99999998643

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.59  E-value=0.012  Score=57.19  Aligned_cols=107  Identities=15%  Similarity=0.118  Sum_probs=64.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.|+|+ |.+|..++..|+..|+  +|+++++++.+++.+...... . .. . .....+. .  +|.    +++.++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~-~-~~-~-~~~~~i~-~--~d~----~~~~~a   68 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH-G-TP-F-TRRANIY-A--GDY----ADLKGS   68 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH-H-GG-G-SCCCEEE-E--CCG----GGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHh-h-hh-h-cCCcEEE-e--CCH----HHhCCC
Confidence            58999998 9999999999999998  999999997765443221100 0 00 0 0111122 2  232    357899


Q ss_pred             CEEEEccCCCCCCCCc-----cccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTEDGPTS-----EVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~-----~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||.+++........     ..|......+++.+....-..++++
T Consensus        69 DvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~  114 (319)
T 1a5z_A           69 DVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV  114 (319)
T ss_dssp             SEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             CEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE
Confidence            9999999865421111     1222334566666666543334333

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.59  E-value=0.0011  Score=63.55  Aligned_cols=68  Identities=13%  Similarity=0.154  Sum_probs=51.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .++++|+|+ |.+|+.++..|++.|+ +|+++.|+.++++.+..              ++..     ...+++..++.++
T Consensus       117 ~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--------------~~~~-----~~~~~~~~~~~~a  176 (277)
T 3don_A          117 DAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--------------NINK-----INLSHAESHLDEF  176 (277)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--------------CCEE-----ECHHHHHHTGGGC
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--------------hccc-----ccHhhHHHHhcCC
Confidence            468999997 8999999999999998 89999999887655421              0111     1345567778899


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||++.+.
T Consensus       177 DiVInaTp~  185 (277)
T 3don_A          177 DIIINTTPA  185 (277)
T ss_dssp             SEEEECCC-
T ss_pred             CEEEECccC
Confidence            999998754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=96.59  E-value=0.0063  Score=58.57  Aligned_cols=36  Identities=19%  Similarity=0.210  Sum_probs=32.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      +++|.|+||+|.+|..++..|.+.|++|++++|++.
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            458999998899999999999999999999998764

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.58  E-value=0.018  Score=55.58  Aligned_cols=105  Identities=18%  Similarity=0.069  Sum_probs=67.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHH----HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQ----ELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~----~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |||.|+|| |++|+.++..|+.++  -++..++.+..+++    +|.....-.       .....++..+  |.    +.
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~-------~~~~~i~~~~--d~----~~   66 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI-------DKYPKIVGGA--DY----SL   66 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGG-------TCCCEEEEES--CG----GG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccC-------CCCCeEecCC--CH----HH
Confidence            68999996 999999999999887  48999998875432    222211100       0011222221  22    35


Q ss_pred             hcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           79 IGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++++|+||.++|.... +.    .++.|..-...+.+++.+.+-+-++.+
T Consensus        67 ~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlv  116 (294)
T 2x0j_A           67 LKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILV  116 (294)
T ss_dssp             GTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEE
T ss_pred             hCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence            8999999999996543 21    345666667778888888775555444

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.01  Score=58.23  Aligned_cols=76  Identities=18%  Similarity=0.110  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec--CCCHHHHHHHh-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN--FDSAESIAKAI-   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD--l~D~~sl~~al-   79 (427)
                      +..+|+|+|+ |.+|...++.+...|++|+++++++++.+.+...+.+.            ++..+  -...+.+.+.. 
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~------------~~~~~~~~~~~~~i~~~~~  234 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV------------TLVVDPAKEEESSIIERIR  234 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE------------EEECCTTTSCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE------------EEcCcccccHHHHHHHHhc
Confidence            3468999997 99999999999999999999999988776666656541            22221  22245666655 


Q ss_pred             ----cCcCEEEEccCC
Q 044905           80 ----GNAGKVVVTIGP   91 (427)
Q Consensus        80 ----~g~d~Vi~~ag~   91 (427)
                          .++|+||.++|.
T Consensus       235 ~~~g~g~D~vid~~g~  250 (352)
T 1e3j_A          235 SAIGDLPNVTIDCSGN  250 (352)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence                369999999874

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.57  E-value=0.0064  Score=61.20  Aligned_cols=88  Identities=25%  Similarity=0.301  Sum_probs=58.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhh---hhccceEEEecCCC------HHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKE---ELKRLNAVESNFDS------AES   74 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~---~~~rl~vv~gDl~D------~~s   74 (427)
                      ..+|+|+|+ |-+|..+++.|...|++|+++++++.+++.+...+..+..+...   +........-.+++      .+.
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~  268 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAAL  268 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhH
Confidence            468999998 99999999999999999999999998877666555431110000   00000000001222      357


Q ss_pred             HHHHhcCcCEEEEccCCC
Q 044905           75 IAKAIGNAGKVVVTIGPT   92 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~   92 (427)
                      +.+++.++|+||.++...
T Consensus       269 l~e~l~~aDVVI~tvlip  286 (405)
T 4dio_A          269 VAEHIAKQDIVITTALIP  286 (405)
T ss_dssp             HHHHHHTCSEEEECCCCS
T ss_pred             HHHHhcCCCEEEECCcCC
Confidence            888999999999987643

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=96.56  E-value=0.0018  Score=61.99  Aligned_cols=67  Identities=19%  Similarity=0.181  Sum_probs=49.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ++++|.|+|+ |.+|+.++..|++.|++|++++|++++.+.+...+..              +   ..+   +.+++.++
T Consensus         3 ~~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~--------------~---~~~---~~~~~~~~   61 (301)
T 3cky_A            3 KSIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQ--------------A---CEN---NQKVAAAS   61 (301)
T ss_dssp             -CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCE--------------E---CSS---HHHHHHHC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCe--------------e---cCC---HHHHHhCC
Confidence            3578999995 9999999999999999999999998766655332221              1   123   33456679


Q ss_pred             CEEEEccC
Q 044905           83 GKVVVTIG   90 (427)
Q Consensus        83 d~Vi~~ag   90 (427)
                      |+||.+..
T Consensus        62 D~vi~~vp   69 (301)
T 3cky_A           62 DIIFTSLP   69 (301)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            99999875

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.56  E-value=0.0043  Score=62.54  Aligned_cols=71  Identities=30%  Similarity=0.455  Sum_probs=53.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH-HHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR-LAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~-~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++|+|+|+ |.+|+.+++.|...|+ +|+++.|++.++..+.. .+..             +  .++   +++.+.+.
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~-------------~--~~~---~~l~~~l~  226 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-------------A--VRF---DELVDHLA  226 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-------------E--CCG---GGHHHHHH
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-------------e--ecH---HhHHHHhc
Confidence            4679999998 9999999999999998 99999999877644432 2221             1  222   34566778


Q ss_pred             CcCEEEEccCCC
Q 044905           81 NAGKVVVTIGPT   92 (427)
Q Consensus        81 g~d~Vi~~ag~~   92 (427)
                      ++|+||.+.+..
T Consensus       227 ~aDvVi~at~~~  238 (404)
T 1gpj_A          227 RSDVVVSATAAP  238 (404)
T ss_dssp             TCSEEEECCSSS
T ss_pred             CCCEEEEccCCC
Confidence            999999998643

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=96.55  E-value=0.0022  Score=60.81  Aligned_cols=65  Identities=17%  Similarity=0.120  Sum_probs=49.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ||+|.|+|+ |.+|+.++..|.+ |++|++++|++++.+.+...+..             ..  +      +.+++.++|
T Consensus         1 M~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~-------------~~--~------~~~~~~~~D   57 (289)
T 2cvz_A            1 MEKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGS-------------EA--V------PLERVAEAR   57 (289)
T ss_dssp             -CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCC-------------EE--C------CGGGGGGCS
T ss_pred             CCeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCc-------------cc--C------HHHHHhCCC
Confidence            468999996 9999999999999 99999999998877666544432             21  1      224567899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+...
T Consensus        58 ~vi~~v~~   65 (289)
T 2cvz_A           58 VIFTCLPT   65 (289)
T ss_dssp             EEEECCSS
T ss_pred             EEEEeCCC
Confidence            99998864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.54  E-value=0.0033  Score=61.01  Aligned_cols=72  Identities=25%  Similarity=0.281  Sum_probs=51.7

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH--HHHHHHh-cCc
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA--ESIAKAI-GNA   82 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~--~sl~~al-~g~   82 (427)
                      +|+|+||+|.+|...++.+...|++|++++++.++.+.+...+.+.            +  .|..+.  +.+.... .++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~------------~--i~~~~~~~~~~~~~~~~~~  217 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKE------------V--LAREDVMAERIRPLDKQRW  217 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSE------------E--EECC---------CCSCCE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcE------------E--EecCCcHHHHHHHhcCCcc
Confidence            7999999999999999999999999999999988777666666541            2  233332  1222222 368


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.++|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999884

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=96.54  E-value=0.001  Score=64.57  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=52.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec--CcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVP--ELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R--~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.|+|+ |.+|+.++..|.+.|++|++++|  ++++.+.+...+....      . .+.+......+.+++.+++.++
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~------~-g~~~~~~~~~~~~~~~~~~~~~   72 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPR------L-GVKLNGVEIFWPEQLEKCLENA   72 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTT------T-TBCCCSEEEECGGGHHHHHTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcc------c-CccccceEEecHHhHHHHHhcC
Confidence            58999997 99999999999999999999999  7766665544332100      0 0000000112222455678899


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.++.+
T Consensus        73 D~vi~~v~~   81 (335)
T 1txg_A           73 EVVLLGVST   81 (335)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEEcCCh
Confidence            999998865

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=96.54  E-value=0.0035  Score=62.73  Aligned_cols=104  Identities=19%  Similarity=0.126  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEe-cCcchHHHHHHHHhhhh--hhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGV-PELGAAQELARLAASYK--ILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~-R~~~~~~~l~~~~~~~~--~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |.+.+|.|.||||++|..|++.|.++. .++..+. .+.+.-+.+........  .+ +.....+.+...|..+      
T Consensus        17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~-p~~~~~~~v~~~~~~~------   89 (381)
T 3hsk_A           17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETL-PETEQDIVVQECKPEG------   89 (381)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCC-CHHHHTCBCEESSSCT------
T ss_pred             CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhccccccccc-ccccccceEEeCchhh------
Confidence            566789999999999999999888876 5787664 22221111211000000  00 0000111233333221      


Q ss_pred             HhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           78 AIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .+.++|+||.|.+..           -+..+...+...|++ +|-+|
T Consensus        90 ~~~~~Dvvf~alp~~-----------~s~~~~~~~~~~G~~-VIDlS  124 (381)
T 3hsk_A           90 NFLECDVVFSGLDAD-----------VAGDIEKSFVEAGLA-VVSNA  124 (381)
T ss_dssp             TGGGCSEEEECCCHH-----------HHHHHHHHHHHTTCE-EEECC
T ss_pred             hcccCCEEEECCChh-----------HHHHHHHHHHhCCCE-EEEcC
Confidence            257899999987642           345677777778874 44333

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=96.54  E-value=0.0027  Score=63.08  Aligned_cols=101  Identities=11%  Similarity=0.078  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhh--hhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASY--KILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~--~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+|.|.||||++|..|++.|.++. .+++.+..+.+.-+.+.......  ..+. .....+.+...|   .+    .+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~-~~~~~~~v~~~~---~~----~~~   78 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVP-KEIADMEIKPTD---PK----LMD   78 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCC-HHHHTCBCEECC---GG----GCT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccc-cccccceEEeCC---HH----Hhc
Confidence            3579999999999999999887765 68887765443212221110000  0000 000011222222   22    257


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++|+||.|.+..           .+..+...+...|++ +|-+|
T Consensus        79 ~vDvvf~a~p~~-----------~s~~~a~~~~~~G~~-vIDlS  110 (359)
T 4dpk_A           79 DVDIIFSPLPQG-----------AAGPVEEQFAKEGFP-VISNS  110 (359)
T ss_dssp             TCCEEEECCCTT-----------THHHHHHHHHHTTCE-EEECS
T ss_pred             CCCEEEECCChH-----------HHHHHHHHHHHCCCE-EEEcC
Confidence            899999998753           224566666778874 55444

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=96.54  E-value=0.0027  Score=63.08  Aligned_cols=101  Identities=11%  Similarity=0.078  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhh--hhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASY--KILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~--~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+|.|.||||++|..|++.|.++. .+++.+..+.+.-+.+.......  ..+. .....+.+...|   .+    .+.
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~-~~~~~~~v~~~~---~~----~~~   78 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVP-KEIADMEIKPTD---PK----LMD   78 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCC-HHHHTCBCEECC---GG----GCT
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccc-cccccceEEeCC---HH----Hhc
Confidence            3579999999999999999887765 68887765443212221110000  0000 000011222222   22    257


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++|+||.|.+..           .+..+...+...|++ +|-+|
T Consensus        79 ~vDvvf~a~p~~-----------~s~~~a~~~~~~G~~-vIDlS  110 (359)
T 4dpl_A           79 DVDIIFSPLPQG-----------AAGPVEEQFAKEGFP-VISNS  110 (359)
T ss_dssp             TCCEEEECCCTT-----------THHHHHHHHHHTTCE-EEECS
T ss_pred             CCCEEEECCChH-----------HHHHHHHHHHHCCCE-EEEcC
Confidence            899999998753           224566666778874 45444

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=96.53  E-value=0.0026  Score=65.07  Aligned_cols=101  Identities=16%  Similarity=0.177  Sum_probs=62.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhh---------hhccceEEEecCCCHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKE---------ELKRLNAVESNFDSAES   74 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~---------~~~rl~vv~gDl~D~~s   74 (427)
                      +-+|.|+|. |++|..++..|++.||+|++++|++++.+.+.. +..+ +..+.         ...++.+ .   +|   
T Consensus         8 ~~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~-g~~~-~~epgl~~~~~~~~~~g~l~~-t---td---   77 (446)
T 4a7p_A            8 SVRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQ-NVMP-IYEPGLDALVASNVKAGRLSF-T---TD---   77 (446)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT-TCCS-SCCTTHHHHHHHHHHTTCEEE-E---SC---
T ss_pred             ceEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc-CCCC-ccCCCHHHHHHhhcccCCEEE-E---CC---
Confidence            347999996 999999999999999999999999998877754 2110 00000         0011211 1   22   


Q ss_pred             HHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHH
Q 044905           75 IAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQL  114 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~  114 (427)
                      +.++++++|+||.+.+..........++.....+++....
T Consensus        78 ~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~  117 (446)
T 4a7p_A           78 LAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAE  117 (446)
T ss_dssp             HHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHH
T ss_pred             HHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHH
Confidence            4567889999999986542110122333344555554443

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.52  E-value=0.0042  Score=58.40  Aligned_cols=67  Identities=25%  Similarity=0.363  Sum_probs=50.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +|+|.|+|+ |.+|+.++..|.+.|++ |.+.+|++++.+.+... +.              .+..|      +.+++.+
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~--------------~~~~~------~~~~~~~   68 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEA--------------EYTTD------LAEVNPY   68 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTC--------------EEESC------GGGSCSC
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC--------------ceeCC------HHHHhcC
Confidence            468999997 99999999999999998 88999998776655432 22              12222      2235678


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.+..+
T Consensus        69 ~Dvvi~av~~   78 (266)
T 3d1l_A           69 AKLYIVSLKD   78 (266)
T ss_dssp             CSEEEECCCH
T ss_pred             CCEEEEecCH
Confidence            9999998754

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=96.51  E-value=0.00083  Score=66.50  Aligned_cols=78  Identities=18%  Similarity=0.142  Sum_probs=51.4

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEE
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKV   85 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~V   85 (427)
                      +|.|+|+ |.+|..++..|++.|++|++++|++++.+.+...+.....+...... ..+...  .|   +.++++++|+|
T Consensus        17 kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~--~~---~~~~~~~aDvV   89 (366)
T 1evy_A           17 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLA-SNITFT--SD---VEKAYNGAEII   89 (366)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCC-TTEEEE--SC---HHHHHTTCSSE
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccc-cceeee--CC---HHHHHcCCCEE
Confidence            8999997 99999999999999999999999987776665443211000000000 001111  23   34567889999


Q ss_pred             EEccC
Q 044905           86 VVTIG   90 (427)
Q Consensus        86 i~~ag   90 (427)
                      |.++.
T Consensus        90 ilav~   94 (366)
T 1evy_A           90 LFVIP   94 (366)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99875

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.51  E-value=0.0057  Score=59.46  Aligned_cols=107  Identities=16%  Similarity=0.058  Sum_probs=63.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +++|.|+|+ |.+|+.++..|+..|+ +|+++++++++++... .....    .........+...  +|   + .++++
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~----~~~~~~~~~i~~t--~d---~-~a~~~   72 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHS----MVMFGSTSKVIGT--DD---Y-ADISG   72 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHH----HHHHTCCCCEEEE--SC---G-GGGTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhh----hhhcCCCcEEEEC--CC---H-HHhCC
Confidence            468999998 9999999999999998 9999999987654321 11000    0000001112211  22   2 36889


Q ss_pred             cCEEEEccCCCCCCCCc-----cccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTEDGPTS-----EVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~-----~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +|+||.+++........     ..|......+++.+....-..++
T Consensus        73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~ii  117 (317)
T 2ewd_A           73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFV  117 (317)
T ss_dssp             CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEE
T ss_pred             CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEE
Confidence            99999999854321111     22333345666666655433333

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.49  E-value=0.0028  Score=61.22  Aligned_cols=66  Identities=15%  Similarity=0.162  Sum_probs=50.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +++|.|+|+ |.+|+.++..|++.|++|++++|++++.+.+...+..              +   ..+   +.+++.++|
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~--------------~---~~~---~~~~~~~~D   88 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGAR--------------L---GRT---PAEVVSTCD   88 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCE--------------E---CSC---HHHHHHHCS
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCE--------------E---cCC---HHHHHhcCC
Confidence            378999996 9999999999999999999999998877666443221              1   123   334567899


Q ss_pred             EEEEccC
Q 044905           84 KVVVTIG   90 (427)
Q Consensus        84 ~Vi~~ag   90 (427)
                      +||.+..
T Consensus        89 vVi~av~   95 (316)
T 2uyy_A           89 ITFACVS   95 (316)
T ss_dssp             EEEECCS
T ss_pred             EEEEeCC
Confidence            9999875

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=96.48  E-value=0.0035  Score=65.77  Aligned_cols=89  Identities=16%  Similarity=0.153  Sum_probs=0.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      ++|+|.|+ |.+|+++++.|.+.|++|+++.++++..+.+.    .             ++.||.+|.+.|.++ ++.+|
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~-------------~i~gD~t~~~~L~~agi~~ad  410 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----V-------------VVYGDATVGQTLRQAGIDRAS  410 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----C-------------EEESCSSSSTHHHHHTTTSCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----C-------------EEEeCCCCHHHHHhcCccccC


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC-eEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG-HVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk-~~V  121 (427)
                      .+|.+.+...          ....+...|++.|.+ ++|
T Consensus       411 ~vi~~~~~d~----------~ni~~~~~ak~l~~~~~ii  439 (565)
T 4gx0_A          411 GIIVTTNDDS----------TNIFLTLACRHLHSHIRIV  439 (565)
T ss_dssp             EEEECCSCHH----------HHHHHHHHHHHHCSSSEEE
T ss_pred             EEEEECCCch----------HHHHHHHHHHHHCCCCEEE

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.44  E-value=0.0048  Score=60.79  Aligned_cols=74  Identities=14%  Similarity=-0.015  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..+|+|+|+ |.+|...++.+...|.+|+++++++++.+.+. ..+.+.            +  .|..+.+.+.+...+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~------------v--i~~~~~~~~~~~~~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD------------Y--VIGSDQAKMSELADS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC------------E--EETTCHHHHHHSTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce------------e--eccccHHHHHHhcCC
Confidence            4568999996 99999999999889999999999988766554 445431            2  345566677766678


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      +|+||.++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999985

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.43  E-value=0.0019  Score=61.63  Aligned_cols=67  Identities=19%  Similarity=0.213  Sum_probs=48.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +||+|.|+|+ |.+|+.++..|.+.|++|++++ ++++.+.+...+..             +    ..+   +.+++.++
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~-------------~----~~~---~~~~~~~~   59 (295)
T 1yb4_A            2 NAMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAV-------------N----VET---ARQVTEFA   59 (295)
T ss_dssp             --CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCB-------------C----CSS---HHHHHHTC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCc-------------c----cCC---HHHHHhcC
Confidence            5679999995 9999999999999999999888 77766655432221             1    123   34567789


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+...
T Consensus        60 D~vi~~vp~   68 (295)
T 1yb4_A           60 DIIFIMVPD   68 (295)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEEECCC
Confidence            999998753

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=96.41  E-value=0.0044  Score=60.33  Aligned_cols=71  Identities=23%  Similarity=0.105  Sum_probs=48.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcc---hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELG---AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~---~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++|+|.|+|+ |.+|..++..|++.| ++|++.+|+++   +..........         ..  + .. .    ++.++
T Consensus        23 M~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~---------~g--~-~~-~----s~~e~   84 (317)
T 4ezb_A           23 MMTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE---------LG--V-EP-L----DDVAG   84 (317)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH---------TT--C-EE-E----SSGGG
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH---------CC--C-CC-C----CHHHH
Confidence            3578999995 999999999999999 99999999973   22222111111         01  1 11 0    22346


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      ++++|+||.+..+
T Consensus        85 ~~~aDvVi~avp~   97 (317)
T 4ezb_A           85 IACADVVLSLVVG   97 (317)
T ss_dssp             GGGCSEEEECCCG
T ss_pred             HhcCCEEEEecCC
Confidence            7889999998865

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.41  E-value=0.0026  Score=59.37  Aligned_cols=66  Identities=9%  Similarity=0.166  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC----eEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF----SVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~----~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +|+|.|+|+ |.+|+.++..|++.|+    +|++.+|++++.+.+... +..               .  ..|   ..++
T Consensus         2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~---------------~--~~~---~~e~   60 (247)
T 3gt0_A            2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLT---------------T--TTD---NNEV   60 (247)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCE---------------E--CSC---HHHH
T ss_pred             CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCE---------------E--eCC---hHHH
Confidence            478999995 9999999999999998    999999998877666432 221               1  123   2345


Q ss_pred             hcCcCEEEEccC
Q 044905           79 IGNAGKVVVTIG   90 (427)
Q Consensus        79 l~g~d~Vi~~ag   90 (427)
                      ++++|+||.+.-
T Consensus        61 ~~~aDvVilav~   72 (247)
T 3gt0_A           61 AKNADILILSIK   72 (247)
T ss_dssp             HHHCSEEEECSC
T ss_pred             HHhCCEEEEEeC
Confidence            677999999883

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.40  E-value=0.0083  Score=59.97  Aligned_cols=86  Identities=20%  Similarity=0.247  Sum_probs=54.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhh------hccc-eEEEec-C-CCHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEE------LKRL-NAVESN-F-DSAE   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~------~~rl-~vv~gD-l-~D~~   73 (427)
                      ...+|+|+|+ |.+|..+++.+...|.+|++++|++.+.+.+...+..+..++..+      .... ....-| . .+.+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            3568999997 999999999999999999999999887666555444311000000      0000 000000 0 0133


Q ss_pred             HHHHHhcCcCEEEEcc
Q 044905           74 SIAKAIGNAGKVVVTI   89 (427)
Q Consensus        74 sl~~al~g~d~Vi~~a   89 (427)
                      .+.+.+.++|+||+++
T Consensus       250 ~l~~~~~~aDvVi~~~  265 (384)
T 1l7d_A          250 AVLKELVKTDIAITTA  265 (384)
T ss_dssp             HHHHHHTTCSEEEECC
T ss_pred             HHHHHhCCCCEEEECC
Confidence            4778889999999988

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=96.39  E-value=0.0049  Score=62.84  Aligned_cols=80  Identities=20%  Similarity=0.191  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhh---------hhhccceEEEecCCCHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSK---------EELKRLNAVESNFDSAE   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~---------~~~~rl~vv~gDl~D~~   73 (427)
                      .|.+|.|.|. |++|..++..|.+.||+|++++.++.+.+.|.. |..+ +..+         ....+|.+     +  .
T Consensus        20 ~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~-G~~p-i~Epgl~ell~~~~~~g~l~~-----t--t   89 (444)
T 3vtf_A           20 HMASLSVLGL-GYVGVVHAVGFALLGHRVVGYDVNPSIVERLRA-GRPH-IYEPGLEEALGRALSSGRLSF-----A--E   89 (444)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHT-TCCS-SCCTTHHHHHHHHHHTTCEEE-----C--S
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHC-CCCC-CCCCCHHHHHHHHHHcCCeeE-----E--c
Confidence            4679999985 999999999999999999999999888776643 1110 0000         00112211     1  1


Q ss_pred             HHHHHhcCcCEEEEccCCC
Q 044905           74 SIAKAIGNAGKVVVTIGPT   92 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~   92 (427)
                      +..+++..+|++|.+++..
T Consensus        90 ~~~~ai~~ad~~~I~VpTP  108 (444)
T 3vtf_A           90 SAEEAVAATDATFIAVGTP  108 (444)
T ss_dssp             SHHHHHHTSSEEEECCCCC
T ss_pred             CHHHHHhcCCceEEEecCC
Confidence            2345678899999998753

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=96.37  E-value=0.0064  Score=61.53  Aligned_cols=69  Identities=17%  Similarity=0.239  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +.++|+|+|+ |.+|+.+++.+.+.|++|++++.++......   ...            ..+.+|+.|.+.+.++.+++
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~ad------------~~~~~~~~d~~~l~~~a~~~   97 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---VAD------------RHLRAAYDDEAALAELAGLC   97 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---HSS------------EEECCCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh---hCC------------EEEECCcCCHHHHHHHHhcC
Confidence            4568999997 9999999999999999999998766532111   111            25678999999999999999


Q ss_pred             CEEEE
Q 044905           83 GKVVV   87 (427)
Q Consensus        83 d~Vi~   87 (427)
                      |+|+.
T Consensus        98 D~V~~  102 (419)
T 4e4t_A           98 EAVST  102 (419)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            99983

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.37  E-value=0.0021  Score=55.08  Aligned_cols=84  Identities=15%  Similarity=0.151  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      .+++|+|.|+|   |..|..+++.|++.||+|+.+  ++.+ .+++  .|..              +..++      .++
T Consensus        12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~v--np~~~~~~i--~G~~--------------~~~sl------~el   67 (140)
T 1iuk_A           12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPV--NPRFQGEEL--FGEE--------------AVASL------LDL   67 (140)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEE--CGGGTTSEE--TTEE--------------CBSSG------GGC
T ss_pred             CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEe--CCCcccCcC--CCEE--------------ecCCH------HHC
Confidence            35789999999   899999999999999986654  4432 1111  0110              11122      222


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      -+.+|.++.+..+.           .+..+++.|.+.|++.++
T Consensus        68 ~~~vDlavi~vp~~-----------~~~~v~~~~~~~gi~~i~   99 (140)
T 1iuk_A           68 KEPVDILDVFRPPS-----------ALMDHLPEVLALRPGLVW   99 (140)
T ss_dssp             CSCCSEEEECSCHH-----------HHTTTHHHHHHHCCSCEE
T ss_pred             CCCCCEEEEEeCHH-----------HHHHHHHHHHHcCCCEEE
Confidence            34689888876531           344567777788998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	427
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	7e-06
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	9e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	2e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.001
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.003
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.003

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 45.4 bits (106), Expect = 7e-06
 Identities = 16/118 (13%), Positives = 32/118 (27%), Gaps = 14/118 (11%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
           T+ V GATG+ G  + +     G  VRA                       + +  +   
Sbjct: 5   TIAVVGATGRQGASLIRVAAAVGHHVRA----------QVHSLKGLIAEELQAIPNVTLF 54

Query: 66  ESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII 123
           +    +   +   +     +            +    +    +  AA+ AG     I 
Sbjct: 55  QGPLLNNVPLMDTLFEGAHLAFINTT----SQAGDEIAIGKDLADAAKRAGTIQHYIY 108

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (102), Expect = 9e-06
 Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 28/220 (12%)

Query: 6   TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
            + + GATGQ G+      ++ G+ V            L R ++    L  E  +  + V
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTV----------LVRDSSR---LPSEGPRPAHVV 51

Query: 66  ESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYD 125
             +   A  + K +     V+V +G   D   + V +  A  ++ A +  GV  V     
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC-- 109

Query: 126 GNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPES 185
                 ++  +L   +        +          + + E+ + Y  +      D     
Sbjct: 110 ------TSAFLLWDPTKVPP--RLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLTG 161

Query: 186 SYNVVVSAEA---SVDANDYKVAKSQIASLVADVFSNTAV 222
           +Y V +        +  +D  +    +  L  D +   + 
Sbjct: 162 AYTVTLDGRGPSRVISKHD--LGHFMLRCLTTDEYDGHST 199

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 12/54 (22%), Positives = 17/54 (31%)

Query: 6  TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEEL 59
           V V GA G     + + LL  G+ VR           L +   +      E  
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETA 66

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 15/74 (20%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 6  TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV 65
             + G TGQ G  + + LL +G+ V  G+    +     R+   Y          +   
Sbjct: 3  IALITGITGQDGSYLTEFLLGKGYEVH-GLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 66 ESNFDSAESIAKAI 79
           ++   A S+ + I
Sbjct: 62 YADLTDASSLRRWI 75

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 7  VFVAGATGQAGVRIAQTLLREGFSVRA 33
          + + GATG  G  +A+  L  G     
Sbjct: 6  ILLIGATGYIGRHVAKASLDLGHPTFL 32

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 8/29 (27%), Positives = 10/29 (34%)

Query: 7  VFVAGATGQAGVRIAQTLLREGFSVRAGV 35
          V + G TG  G RI    +  G       
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHPTYVLF 34

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	427
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.93
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.91
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.91
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.91
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.91
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.9
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.89
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.89
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.89
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.89
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.88
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.88
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.88
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.88
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.87
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.87
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.87
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.86
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.86
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.84
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.84
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.84
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.76
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.76
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.75
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.69
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.68
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.66
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.64
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.62
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.62
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.62
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.62
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.6
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.6
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.6
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.59
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.58
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.58
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.57
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.57
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.57
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.57
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.57
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.57
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.57
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.56
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.56
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.56
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.56
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.56
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.55
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.54
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.54
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.54
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.53
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.53
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.53
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.52
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.51
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.51
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.5
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.5
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.5
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.5
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.49
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.49
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.47
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.45
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.44
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.44
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.44
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.42
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.42
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.41
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.41
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.38
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.36
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.34
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.33
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.26
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.24
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.22
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.2
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.2
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.17
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.12
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.1
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.09
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.05
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.9
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.81
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.66
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	98.53
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.32
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.03
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.97
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.95
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.9
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.9
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.85
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.77
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.73
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.7
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.67
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.61
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.61
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.59
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.51
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.5
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.49
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.47
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.46
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.44
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.44
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.43
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.43
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.42
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.42
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.41
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.37
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.37
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.36
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.36
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.35
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.33
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.3
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.3
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.28
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.24
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.22
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.21
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.21
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.21
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.2
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.15
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.14
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.13
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.12
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.11
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.11
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.09
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.07
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.06
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.03
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	97.01
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.98
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	96.95
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.93
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.93
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.93
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.88
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.85
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.85
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.83
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.81
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.76
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.76
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	96.75
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.75
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.75
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	96.74
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.7
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.67
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.51
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.43
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.4
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.37
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.34
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.3
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.29
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.27
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.15
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	95.97
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.91
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	95.81
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.79
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	95.78
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	95.68
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.6
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	95.58
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.52
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	95.5
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	95.42
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.36
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	95.34
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.23
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.13
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.11
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.11
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	95.03
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.97
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.87
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.72
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	94.68
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.61
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.53
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.46
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	94.44
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.39
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.31
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.26
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.13
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.13
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.07
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.97
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.97
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	93.88
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.82
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.81
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.78
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.76
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.75
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.71
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.48
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.44
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.44
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.3
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.1
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.06
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.94
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	92.93
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	92.91
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	92.9
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.89
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.82
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.75
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.63
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	92.55
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.39
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.1
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	92.01
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.94
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.91
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.89
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	91.88
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.61
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	91.35
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	91.28
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	91.19
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	91.16
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.16
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.16
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.09
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	90.99
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.92
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.76
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.65
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.59
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	90.41
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	90.23
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	90.02
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.75
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.53
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	89.51
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.2
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.11
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	89.03
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	88.9
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.83
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.73
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.69
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	88.64
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	88.58
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	88.24
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	88.17
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	88.15
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	87.83
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	87.76
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	87.39
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	87.14
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	87.12
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.03
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	87.01
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.93
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.89
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	86.69
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	86.65
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.45
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	86.08
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	85.84
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.81
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.73
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	85.66
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	85.52
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.64
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	84.11
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.11
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.66
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	83.37
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	83.34
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	82.88
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	82.83
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	81.67
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	81.66
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.46
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	81.41
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	81.26
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.08
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.06
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	80.73
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	80.62

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.6e-29  Score=226.49  Aligned_cols=203  Identities=13%  Similarity=0.196  Sum_probs=152.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |.|+||+||||||++|++|+++|+++||+|++++|++++.....             ..+++++.+|++|.+++.+++++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-------------~~~~~~~~gD~~d~~~l~~al~~   67 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-------------PRPAHVVVGDVLQAADVDKTVAG   67 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-------------CCCSEEEESCTTSHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-------------ccccccccccccchhhHHHHhcC
Confidence            78999999999999999999999999999999999988643321             24567999999999999999999


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHH
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQ  161 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~  161 (427)
                      +|+|||++|.........++..++.+++++++++|++|||++||++++....     ..+..... +...+ ...|   +
T Consensus        68 ~d~vi~~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~-----~~~~~~~~-~~~~~-~~~e---~  137 (205)
T d1hdoa_          68 QDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT-----KVPPRLQA-VTDDH-IRMH---K  137 (205)
T ss_dssp             CSEEEECCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT-----CSCGGGHH-HHHHH-HHHH---H
T ss_pred             CCEEEEEeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCc-----cccccccc-cchHH-HHHH---H
Confidence            9999999998665445677888999999999999999999999887643321     11222211 22111 1234   3


Q ss_pred             HHhcCCCeEEEEeCC-CCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          162 KVIETDVSYTFIKTS-LTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       162 ~l~~~gl~~tilRPG-~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      .+.++|++||+|||| ++++...   ........+.  .+..+|+++|+|++++.+++++ .+.|+.+.++..
T Consensus       138 ~l~~~~~~~tiirp~~~~~~~~~---~~~~~~~~~~--~~~~~i~~~DvA~~~~~~l~~~-~~~g~~~~~s~~  204 (205)
T d1hdoa_         138 VLRESGLKYVAVMPPHIGDQPLT---GAYTVTLDGR--GPSRVISKHDLGHFMLRCLTTD-EYDGHSTYPSHQ  204 (205)
T ss_dssp             HHHHTCSEEEEECCSEEECCCCC---SCCEEESSSC--SSCSEEEHHHHHHHHHHTTSCS-TTTTCEEEEECC
T ss_pred             HHHhcCCceEEEecceecCCCCc---ccEEEeeCCC--CCCCcCCHHHHHHHHHHHhCCC-CCCCEEEecCCc
Confidence            445699999999998 5544332   2222222222  2336899999999999999876 478998888754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=9.1e-26  Score=223.39  Aligned_cols=236  Identities=9%  Similarity=0.038  Sum_probs=160.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++.+||||||||||++|++.|+++||+|++++|..+..  ..+......    .....++++++.+|++|.+++.+++.+
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~   76 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD----PHTCNPKFHLHYGDLSDTSNLTRILRE   76 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------CCEEECCCCSSCHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh----hhhcCCCeEEEEeecCCHHHHHHHHhc
Confidence            36789999999999999999999999999999976421  111111000    001145788999999999999999986


Q ss_pred             c--CEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCC---eEEEEecccccccccCCCC-CCCCccchhhh
Q 044905           82 A--GKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVG---HVAIIYDGNTTAASTYNVL-DGISSFFNNLF  148 (427)
Q Consensus        82 ~--d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk---~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~  148 (427)
                      +  |+|||+++....+.       +.++|+.++.||+++|+..+++   +|||+||+++|+.....+. +..+..+.+.|
T Consensus        77 ~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y  156 (357)
T d1db3a_          77 VQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPY  156 (357)
T ss_dssp             HCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHH
T ss_pred             cCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChH
Confidence            5  99999998754321       4578899999999999998765   6999999999865443322 22222234567


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----------------ccceEEecccccCCCCCcccHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----------------SYNVVVSAEASVDANDYKVAKSQIA  210 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----------------~~~i~~~~~~~~~~~~~~i~v~DVA  210 (427)
                      +.++ +.+|.++..+. ..+++++++||+ .+++...+.                .......+.+..  ..+++|++|++
T Consensus       157 ~~sK-~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~--~r~~~~v~D~~  233 (357)
T d1db3a_         157 AVAK-LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDS--LRDWGHAKDYV  233 (357)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTC--EECCEEHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCe--eecceeechHH
Confidence            7666 67888887766 468999999985 333221110                011112122211  12599999999


Q ss_pred             HHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          211 SLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       211 ~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      +++..+++..   .++.|||++++   ..++.+++..+....
T Consensus       234 ~a~~~~~~~~---~~~~yni~sg~---~~s~~~~~~~~~~~~  269 (357)
T d1db3a_         234 KMQWMMLQQE---QPEDFVIATGV---QYSVRQFVEMAAAQL  269 (357)
T ss_dssp             HHHHHTTSSS---SCCCEEECCCC---CEEHHHHHHHHHHTT
T ss_pred             HHHHHHHhCC---CCCeEEECCCC---ceehHHHHHHHHHHh
Confidence            9999888743   57899999998   566677776665543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=4.2e-24  Score=195.80  Aligned_cols=220  Identities=16%  Similarity=0.196  Sum_probs=150.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +|++|||||||||||++|++.|+++|+  .|++++|++++...+              ..+++++.+|+.|.+.+.++++
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~   67 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------GGEADVFIGDITDADSINPAFQ   67 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------TCCTTEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--------------cCCcEEEEeeeccccccccccc
Confidence            689999999999999999999999995  577788987654433              2355699999999999999999


Q ss_pred             CcCEEEEccCCCCCC--------------------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 NAGKVVVTIGPTEDG--------------------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~--------------------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                      ++|+|||+++.....                    ....+++.++.+++..+...+.+++.+.|+...+..     ..+.
T Consensus        68 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-----~~~~  142 (252)
T d2q46a1          68 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP-----DHPL  142 (252)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT-----TCGG
T ss_pred             cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCC-----Cccc
Confidence            999999999864320                    033556779999999999999999988876653211     1111


Q ss_pred             CccchhhhhccccccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCccceEEec-ccccCCCCCcccHHHHHHHHHHHhc
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTS-LTEDFSPESSYNVVVSA-EASVDANDYKVAKSQIASLVADVFS  218 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~~~i~~~~-~~~~~~~~~~i~v~DVA~~v~~al~  218 (427)
                      .......+...    ...........|++++++||+ ++++...  ...+.... ........++||++|||++++.++.
T Consensus       143 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~ilRp~~v~g~~~~--~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~  216 (252)
T d2q46a1         143 NKLGNGNILVW----KRKAEQYLADSGTPYTIIRAGGLLDKEGG--VRELLVGKDDELLQTDTKTVPRADVAEVCIQALL  216 (252)
T ss_dssp             GGGGGCCHHHH----HHHHHHHHHHSSSCEEEEEECEEECSCTT--SSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTT
T ss_pred             ccccccchhhh----hhhhhhhhhcccccceeecceEEECCCcc--hhhhhhccCcccccCCCCeEEHHHHHHHHHHHhC
Confidence            11111111111    111122233689999999998 5554322  22333322 2222334479999999999999998


Q ss_pred             CcccccCcEEEEecCCCCChhhHHHHHHHH
Q 044905          219 NTAVAENKVVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       219 ~~~~~~g~~~nI~~~~~~~~~s~~ell~~i  248 (427)
                      ++ ...|++|||++++..+..++.++.+.+
T Consensus       217 ~~-~~~g~~~~i~~~~~~~~~~~~~~~~lf  245 (252)
T d2q46a1         217 FE-EAKNKAFDLGSKPEGTSTPTKDFKALF  245 (252)
T ss_dssp             CG-GGTTEEEEEEECCTTTSCCCCCHHHHH
T ss_pred             Cc-cccCcEEEEeeCCCCCChhHHHHHHHH
Confidence            76 467899999987644434444444333

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.91  E-value=4.6e-24  Score=208.94  Aligned_cols=240  Identities=10%  Similarity=0.063  Sum_probs=168.4

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+++|||||||||||++|+++|+++||+|++++|... ....+....   .........++.++.+|+.|...+.....
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~d~~~~~~~~~   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVR---SLVSEKQWSNFKFIQGDIRNLDDCNNACA   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH---HHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH---HhhhhcccCCeeEEeeccccccccccccc
Confidence            46789999999999999999999999999999987443 111111110   00111224577899999999999999999


Q ss_pred             CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccc
Q 044905           81 NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQ  152 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~  152 (427)
                      +.+.|+|+++....     ++  .+++|+.++.+++++|..+++++|||+||+++|+.....+. +..+..+.+.|+.++
T Consensus        91 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  170 (341)
T d1sb8a_          91 GVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTK  170 (341)
T ss_dssp             TCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHH
T ss_pred             cccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHH
Confidence            99999998876542     11  56788899999999999999999999999999876443322 222223335666665


Q ss_pred             cccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC--Ccc--------------ceEEecccccCCCCCcccHHHHHHHHH
Q 044905          153 PLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE--SSY--------------NVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       153 ~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~--~~~--------------~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                       +..|.++..+. ..+++++++||+ +++....+  ...              .+.+.+.+...  .+++|++|++.++.
T Consensus       171 -~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~--r~~i~v~D~~~a~~  247 (341)
T d1sb8a_         171 -YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS--RDFCYIENTVQANL  247 (341)
T ss_dssp             -HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE--ECCEEHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEE--EEEEEEeccchhhh
Confidence             67888887766 568999999985 33222111  000              12222222222  25999999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      .++.......+.+|+++++.   ..++.+++..+.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~---~~si~~i~~~i~~  280 (341)
T d1sb8a_         248 LAATAGLDARNQVYNIAVGG---RTSLNQLFFALRD  280 (341)
T ss_dssp             HHHTCCGGGCSEEEEESCSC---CEEHHHHHHHHHH
T ss_pred             hhhhccccccceeeeecccc---cchHHHHHHHHHH
Confidence            88876545578899999987   5556666666543

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=6.8e-24  Score=209.31  Aligned_cols=229  Identities=12%  Similarity=0.034  Sum_probs=162.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +.|+|||||||||||++|++.|+++||+|++++|........             .....++..+|+.|.+.+..+++++
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~~~~~~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------DMFCDEFHLVDLRVMENCLKVTEGV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------GGTCSEEEECCTTSHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-------------hcccCcEEEeechhHHHHHHHhhcC
Confidence            367899999999999999999999999999998765421100             1223358889999999999999999


Q ss_pred             CEEEEccCCCCCC----C----CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC--------CCccchh
Q 044905           83 GKVVVTIGPTEDG----P----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG--------ISSFFNN  146 (427)
Q Consensus        83 d~Vi~~ag~~~~~----~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~--------~~~~~~~  146 (427)
                      |.|||+++.....    .    ....|+.++.+++++|..+++++||++||+.+++.........        .+..+.+
T Consensus        81 d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~  160 (363)
T d2c5aa1          81 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD  160 (363)
T ss_dssp             SEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred             CeEeecccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCC
Confidence            9999999876541    1    5567888999999999999999999999998876544322111        1112234


Q ss_pred             hhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC---C--------------ccceEEecccccCCCCCcccHH
Q 044905          147 LFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE---S--------------SYNVVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~---~--------------~~~i~~~~~~~~~~~~~~i~v~  207 (427)
                      .|+.++ +.+|.++..+. ..|++++++||+ .++.....   .              .......+.+....  +++|++
T Consensus       161 ~Yg~sK-~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r--d~i~v~  237 (363)
T d2c5aa1         161 AFGLEK-LATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR--SFTFID  237 (363)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE--CCEEHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEE--EEeehh
Confidence            566665 67888887766 469999999985 33221110   0              00111112222222  599999


Q ss_pred             HHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          208 QIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       208 DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      |+++++..++...   .+++||++++.   ..++.+++..+.+..+
T Consensus       238 D~~~~~~~~~~~~---~~~~~ni~~~~---~~s~~~l~~~i~~~~g  277 (363)
T d2c5aa1         238 ECVEGVLRLTKSD---FREPVNIGSDE---MVSMNEMAEMVLSFEE  277 (363)
T ss_dssp             HHHHHHHHHHHSS---CCSCEEECCCC---CEEHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhCC---CCCeEEEecCC---cccHHHHHHHHHHHhC
Confidence            9999999888643   57899999998   5566666666655444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.1e-23  Score=204.25  Aligned_cols=236  Identities=11%  Similarity=0.106  Sum_probs=156.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH-HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ-ELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~-~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      |+|||||||||||++|++.|+++||+|++++|...... .+...       .....++++++.+|++|.+.+.++++  +
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   73 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-------ERLGGKHPTFVEGDIRNEALMTEILHDHA   73 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-------HHHHTSCCEEEECCTTCHHHHHHHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-------HhhcCCCCEEEEeecCCHHHHHHHHhccC
Confidence            68999999999999999999999999999987433211 11100       01113577899999999999999998  7


Q ss_pred             cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC-CCCc-cchhhhhccc
Q 044905           82 AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD-GISS-FFNNLFSRNQ  152 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~-~~~~-~~~~~~~k~~  152 (427)
                      +|+|||+|+....     +  ...++|+.++.+++++|++.+++++|++||+++|+........ ..+. .....|+..+
T Consensus        74 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK  153 (338)
T d1udca_          74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSK  153 (338)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHH
T ss_pred             CCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHH
Confidence            9999999986532     1  1578899999999999999999999999999987655433222 1111 1223444444


Q ss_pred             cccHHHHHHHHh--cCCCeEEEEeCC-CCCCCCC------CC-----------------ccceEEecccc-cCCC---CC
Q 044905          153 PLTVPEFLQKVI--ETDVSYTFIKTS-LTEDFSP------ES-----------------SYNVVVSAEAS-VDAN---DY  202 (427)
Q Consensus       153 ~l~~E~~l~~l~--~~gl~~tilRPG-~~~~~~~------~~-----------------~~~i~~~~~~~-~~~~---~~  202 (427)
                       +..|.++....  ..+++++++||+ .++....      +.                 ...+.+.|... ...+   .+
T Consensus       154 -~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd  232 (338)
T d1udca_         154 -LMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRD  232 (338)
T ss_dssp             -HHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEEC
T ss_pred             -hhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceee
Confidence             55777765433  468999999975 2221100      00                 00122222111 1111   15


Q ss_pred             cccHHHHHHHHHHHhcCc-ccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          203 KVAKSQIASLVADVFSNT-AVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~-~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++|+.|++.+...+.... ....+++||++++.   ..++.+++..+.+.
T Consensus       233 ~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~---~~si~e~~~~i~~~  279 (338)
T d1udca_         233 YIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV---GNSVLDVVNAFSKA  279 (338)
T ss_dssp             EEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSS---CEEHHHHHHHHHHH
T ss_pred             EEEEeehhhhccccccccccccCcceeeecCCC---CCcHHHHHHHHHHH
Confidence            899999998776554321 12356889999988   45556666665543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.90  E-value=2.8e-24  Score=209.01  Aligned_cols=230  Identities=13%  Similarity=0.096  Sum_probs=163.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEE------ecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAG------VPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al------~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |+|||||||||||++|++.|+++||+|++.      ++...  ....+.         ......+++++.+|+.+...+.
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~d~~~~~~~~   71 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA---------PVDADPRLRFVHGDIRDAGLLA   71 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG---------GGTTCTTEEEEECCTTCHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhh---------hhhcCCCeEEEEeccccchhhh
Confidence            689999999999999999999999865543      32211  111111         1112457789999999999999


Q ss_pred             HHhcCcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-CCCCCccchhhh
Q 044905           77 KAIGNAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-LDGISSFFNNLF  148 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-~~~~~~~~~~~~  148 (427)
                      .....+|.|+|+|+....     .  ...++|+.++.+++++|.+.++++|||+||+++|+...... .+..+..+.+.|
T Consensus        72 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y  151 (322)
T d1r6da_          72 RELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPY  151 (322)
T ss_dssp             HHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHH
T ss_pred             ccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHH
Confidence            999999999999987543     1  14568888999999999999999999999999987654432 233333334567


Q ss_pred             hccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc-----------cceEEecccccCCCCCcccHHHHHHHHH
Q 044905          149 SRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS-----------YNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~-----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +.++ +..|.++..+. +.+++++++||+ .++..... ..           ..+.+.+.+....  +++|++|+|+++.
T Consensus       152 ~~sK-~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r--~~i~v~D~a~ai~  228 (322)
T d1r6da_         152 AASK-AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVR--EWVHTDDHCRGIA  228 (322)
T ss_dssp             HHHH-HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEE--EEEEHHHHHHHHH
T ss_pred             HHHH-HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEE--ccEEHHHHHHHHH
Confidence            6665 67888887766 569999999986 44332211 00           1233323222222  5899999999999


Q ss_pred             HHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          215 DVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       215 ~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      .+++++  ..+++||++++.   ..++.+++..+.+.
T Consensus       229 ~~~~~~--~~~~~~ni~~~~---~~s~~e~~~~i~~~  260 (322)
T d1r6da_         229 LVLAGG--RAGEIYHIGGGL---ELTNRELTGILLDS  260 (322)
T ss_dssp             HHHHHC--CTTCEEEECCCC---EEEHHHHHHHHHHH
T ss_pred             HHHhCC--CCCCeeEEeecc---cchhHHHHHHHHHH
Confidence            999754  357899999998   56666666666544

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.8e-24  Score=210.18  Aligned_cols=223  Identities=9%  Similarity=0.082  Sum_probs=149.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +++|||||||||+|++|+++|+++|++|++++|... ....+. ...        ...++++...|+.     ..++.++
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~~--------~~~~~d~~~~~~~-----~~~~~~~   66 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE-HWI--------GHENFELINHDVV-----EPLYIEV   66 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG-GGT--------TCTTEEEEECCTT-----SCCCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH-Hhc--------CCCceEEEehHHH-----HHHHcCC
Confidence            478999999999999999999999999999987443 222221 111        1234455555553     3456789


Q ss_pred             CEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-----C-Cccchhhhh
Q 044905           83 GKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-----I-SSFFNNLFS  149 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-----~-~~~~~~~~~  149 (427)
                      |+|||+|+....     ++  .+++|+.++.+|+++|++.++ ++||+||+++|+.....+...     . +..+...|+
T Consensus        67 d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~  145 (312)
T d2b69a1          67 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYD  145 (312)
T ss_dssp             SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHH
T ss_pred             CEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHH
Confidence            999999986542     21  468899999999999999998 799999999987644322111     1 112234566


Q ss_pred             ccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc--------------cceEEecccccCCCCCcccHHHHHHHH
Q 044905          150 RNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS--------------YNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       150 k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~--------------~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .++ +++|.++..+. ..|++++++||+ .++.......              ..+.+.+.+...  .+++|++|+++++
T Consensus       146 ~sK-~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~--r~~i~v~D~~~~~  222 (312)
T d2b69a1         146 EGK-RVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT--RAFQYVSDLVNGL  222 (312)
T ss_dssp             HHH-HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE--EECEEHHHHHHHH
T ss_pred             HHH-HHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCee--EccEEHHHHHHHH
Confidence            655 67888887765 569999999986 3332211110              112222222222  2699999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ..+++..   .+.+||++++.   ..++.+++..+.+
T Consensus       223 ~~~~~~~---~~~~~n~~~~~---~~~~~~~~~~i~~  253 (312)
T d2b69a1         223 VALMNSN---VSSPVNLGNPE---EHTILEFAQLIKN  253 (312)
T ss_dssp             HHHHTSS---CCSCEEESCCC---EEEHHHHHHHHHH
T ss_pred             HHHHhhc---cCCceEecCCc---ccchhhHHHHHHH
Confidence            9888643   57789999998   4455555555444

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.89  E-value=1.4e-23  Score=207.98  Aligned_cols=231  Identities=9%  Similarity=0.063  Sum_probs=158.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g~   82 (427)
                      |+|||||||||||++|+++|++.|++|+++.++.+.......      +-+....++++++.+|++|.+.+.++++  .+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~------~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   74 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES------LSDISESNRYNFEHADICDSAEITRIFEQYQP   74 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG------GTTTTTCTTEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHH------HHhhhhcCCcEEEEccCCCHHHHHHHHHhCCC
Confidence            689999999999999999999999987666554332111100      0011224678899999999999999887  48


Q ss_pred             CEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcC---------CCeEEEEecccccccccCCCCC--------
Q 044905           83 GKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAG---------VGHVAIIYDGNTTAASTYNVLD--------  138 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~g---------Vk~~V~vSSs~v~~~~~~~~~~--------  138 (427)
                      |+|||+|+....     ++  ..++|+.++.+++++|++.+         +++||++||+.+|+........        
T Consensus        75 d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~  154 (361)
T d1kewa_          75 DAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPL  154 (361)
T ss_dssp             SEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC
T ss_pred             CEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCC
Confidence            999999987542     22  56888899999999998865         4589999999998765432110        


Q ss_pred             --C-CCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-C-----------ccceEEecccccCCCC
Q 044905          139 --G-ISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-S-----------SYNVVVSAEASVDAND  201 (427)
Q Consensus       139 --~-~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~-----------~~~i~~~~~~~~~~~~  201 (427)
                        . .+..+.+.|+.++ +..|.++..+. ..+++++++||+ .+++.... .           ...+.+.+.+....  
T Consensus       155 ~~e~~~~~p~s~Yg~sK-~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r--  231 (361)
T d1kewa_         155 FTETTAYAPSSPYSASK-ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIR--  231 (361)
T ss_dssp             BCTTSCCCCCSHHHHHH-HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEE--
T ss_pred             cccCCCCCCCCHHHHHH-HHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEE--
Confidence              0 1111224466655 67888887766 568999999985 33322111 0           01232323222222  


Q ss_pred             CcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          202 YKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      +++|++|+|+++..++++.  ..+.+|||+++.   ..++.+++..+.
T Consensus       232 ~~i~v~D~a~ai~~~~~~~--~~~~~~Ni~s~~---~~s~~~~~~~i~  274 (361)
T d1kewa_         232 DWLYVEDHARALHMVVTEG--KAGETYNIGGHN---EKKNLDVVFTIC  274 (361)
T ss_dssp             EEEEHHHHHHHHHHHHHHC--CTTCEEEECCCC---EEEHHHHHHHHH
T ss_pred             eCEEHHHHHHHHHHHHhcC--CCCCeEEECCCC---CcchHHHHhHhh
Confidence            5899999999999998754  357899999988   556666666654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=1.4e-22  Score=195.81  Aligned_cols=231  Identities=12%  Similarity=0.031  Sum_probs=160.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN-   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g-   81 (427)
                      ++|||||||||||++|+++|+++||+|++++|..+.  ...+.....         .++++++.+|+.|.+.+.+.+.. 
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~   71 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI---------EGDIQYEDGDMADACSVQRAVIKA   71 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC---------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc---------cCCcEEEEccccChHHhhhhhccc
Confidence            589999999999999999999999999999997653  233433222         35678999999999999988764 


Q ss_pred             -cCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCC-eEEEEecccccccccCCCCCC-CCccchhhhhcc
Q 044905           82 -AGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVG-HVAIIYDGNTTAASTYNVLDG-ISSFFNNLFSRN  151 (427)
Q Consensus        82 -~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk-~~V~vSSs~v~~~~~~~~~~~-~~~~~~~~~~k~  151 (427)
                       .++++|+++......       ....|+.++.+++++|++.+++ +|++.||+.+|+.......++ .+....+.|+.+
T Consensus        72 ~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~s  151 (321)
T d1rpna_          72 QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVA  151 (321)
T ss_dssp             CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             cccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHH
Confidence             567888776544311       4667888999999999999965 666667666655444333222 222234566666


Q ss_pred             ccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-Cc---------------cceEEecccccCCCCCcccHHHHHHHH
Q 044905          152 QPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-SS---------------YNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       152 ~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~~---------------~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      + +..|.++..+. ..+++++++||+ .+++.... ..               ......+.+....  +++|++|+|+++
T Consensus       152 K-~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r--~~i~v~D~~~~~  228 (321)
T d1rpna_         152 K-LYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKR--DWGFAGDYVEAM  228 (321)
T ss_dssp             H-HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEE--ECEEHHHHHHHH
T ss_pred             H-HHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEE--ccEEeHHHHHHH
Confidence            5 67888877766 578999999985 33322111 00               0111112222221  589999999999


Q ss_pred             HHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          214 ADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       214 ~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ..++.++   .++.||++++.   ..++.+++..+....+
T Consensus       229 ~~~~~~~---~~~~~ni~~~~---~~s~~~~~~~~~~~~~  262 (321)
T d1rpna_         229 WLMLQQD---KADDYVVATGV---TTTVRDMCQIAFEHVG  262 (321)
T ss_dssp             HHHHHSS---SCCCEEECCSC---EEEHHHHHHHHHHTTT
T ss_pred             HHHHhcC---CcCCceecccc---cceehhhhHHHHHHhC
Confidence            9999764   36789999988   6677777777766433

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=9.4e-23  Score=199.24  Aligned_cols=229  Identities=10%  Similarity=0.085  Sum_probs=155.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH-HhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK-AIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~-al~g~   82 (427)
                      |||||||||||||++|+++|+++| ++|+++++.......+            .+.++++++.+|++|.+.+.+ +++++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~------------~~~~~~~~i~~Di~~~~~~~~~~~~~~   68 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------LNHPHFHFVEGDISIHSEWIEYHVKKC   68 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG------------TTCTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh------------ccCCCeEEEECccCChHHHHHHHHhCC
Confidence            689999999999999999999999 5899998865432222            124677899999988755544 77889


Q ss_pred             CEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC--------CCccchhh
Q 044905           83 GKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG--------ISSFFNNL  147 (427)
Q Consensus        83 d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~--------~~~~~~~~  147 (427)
                      |+|||+++.....       .....|+.++.+++++|.+.+++ ++|+||+.+|+.........        ....+...
T Consensus        69 d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~-~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  147 (342)
T d2blla1          69 DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR-IIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI  147 (342)
T ss_dssp             SEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCE-EEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGH
T ss_pred             CccccccccccccccccCCcccccccccccccccccccccccc-ccccccccccccccccccccccccccccccCCCcch
Confidence            9999999976531       14678888999999999999885 46778888766654332211        11112245


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCC----CC--c--------------cceEEecccccCCCCCccc
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSP----ES--S--------------YNVVVSAEASVDANDYKVA  205 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~----~~--~--------------~~i~~~~~~~~~~~~~~i~  205 (427)
                      |+.++ +..|.++..+. ..|++++++||+ .+.....    ..  .              ..+.+.+.+...  .+++|
T Consensus       148 Y~~sK-~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~--r~~i~  224 (342)
T d2blla1         148 YSVSK-QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK--RCFTD  224 (342)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE--EECEE
T ss_pred             hhhcc-cchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCee--eeecc
Confidence            65554 66888887665 568999999974 2221110    00  0              012222222222  25999


Q ss_pred             HHHHHHHHHHHhcCcc-cccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          206 KSQIASLVADVFSNTA-VAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       206 v~DVA~~v~~al~~~~-~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++|+|+++..++.++. ...+++|||+++..  ..++.++++.+.+.
T Consensus       225 v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~--~~t~~~l~~~i~~~  269 (342)
T d2blla1         225 IRDGIEALYRIIENAGNRCDGEIINIGNPEN--EASIEELGEMLLAS  269 (342)
T ss_dssp             HHHHHHHHHHHHHCGGGTTTTEEEEECCTTS--EEEHHHHHHHHHHH
T ss_pred             cccccceeeeehhhccccCCCeEEEEecccc--hhHHHHHHHHHHHH
Confidence            9999999999998652 34688999987642  24566666655443

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.89  E-value=5.8e-23  Score=201.58  Aligned_cols=234  Identities=12%  Similarity=0.085  Sum_probs=160.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .||+|||||||||||++|+++|+++|++|++++++... .....       .+......+++++.+|+.|.+.+..++.+
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~-------~~~~~~~~~i~~~~~Di~d~~~~~~~~~~   73 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA-------NLEAILGDRVELVVGDIADAELVDKLAAK   73 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG-------GTGGGCSSSEEEEECCTTCHHHHHHHHTT
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHH-------HHHHhhcCCeEEEEccCCCHHHHHHHHhh
Confidence            47899999999999999999999999887777654211 00000       00111235788999999999999999999


Q ss_pred             cCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-------------CCCCC
Q 044905           82 AGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-------------LDGIS  141 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-------------~~~~~  141 (427)
                      ++.|+|+++....     ++  .+++|+.++.+++++|...+. +++++||+++|+......             .+..+
T Consensus        74 ~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~  152 (346)
T d1oc2a_          74 ADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETN  152 (346)
T ss_dssp             CSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSC
T ss_pred             hhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCcccccccCCC
Confidence            9999999987543     22  567889999999999999986 788888888875421110             01111


Q ss_pred             ccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC-C-----------ccceEEecccccCCCCCcccHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE-S-----------SYNVVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~-~-----------~~~i~~~~~~~~~~~~~~i~v~  207 (427)
                      ..+.+.|+..+ +..|.++..+. ..+++++++||+ .+++.... .           ...+...+.+...  .+++|++
T Consensus       153 ~~p~s~Y~~sK-~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~--r~~i~v~  229 (346)
T d1oc2a_         153 YNPSSPYSSTK-AASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNV--RDWIHTN  229 (346)
T ss_dssp             CCCCSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCE--EECEEHH
T ss_pred             CCCCCHHHHHH-HHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCcc--ccccchh
Confidence            12235566655 66888887665 568999999996 44322111 0           0012222222222  2689999


Q ss_pred             HHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          208 QIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       208 DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      |+|++++.++.++  ..+..++++++.   ..++.+++..+.+..
T Consensus       230 D~a~a~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~i~~~~  269 (346)
T d1oc2a_         230 DHSTGVWAILTKG--RMGETYLIGADG---EKNNKEVLELILEKM  269 (346)
T ss_dssp             HHHHHHHHHHHHC--CTTCEEEECCSC---EEEHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHhhc--ccCccccccccc---cccchHHHHHHHHHh
Confidence            9999999887743  468899999998   666677777766543

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=1.9e-22  Score=197.52  Aligned_cols=237  Identities=13%  Similarity=0.149  Sum_probs=156.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc------h-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG------A-AQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~------~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      .+||||||||||||++|+++|+++||+|++++|...      . ...+...       ......++.++.+|++|.+.+.
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~d~~~l~   74 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-------QELTGRSVEFEEMDILDQGALQ   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-------HHHHTCCCEEEECCTTCHHHHH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHH-------HHhcCCCcEEEEeecccccccc
Confidence            468999999999999999999999999999974211      1 1112111       1112467889999999999999


Q ss_pred             HHhcCc--CEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCC--ccch
Q 044905           77 KAIGNA--GKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGIS--SFFN  145 (427)
Q Consensus        77 ~al~g~--d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~--~~~~  145 (427)
                      +++.+.  ++++|+|+....     .+  ..+.|+.++.+++++|+..++++|+|+||+.+++...........  ....
T Consensus        75 ~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~  154 (346)
T d1ek6a_          75 RLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT  154 (346)
T ss_dssp             HHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             ccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccC
Confidence            988764  578899986542     11  467889999999999999999999999999987665543322211  1222


Q ss_pred             hhhhccccccHHHHHHHHh--cCCCeEEEEeCC-CCCCCCC----CC---c----------------cceEEeccc-ccC
Q 044905          146 NLFSRNQPLTVPEFLQKVI--ETDVSYTFIKTS-LTEDFSP----ES---S----------------YNVVVSAEA-SVD  198 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~--~~gl~~tilRPG-~~~~~~~----~~---~----------------~~i~~~~~~-~~~  198 (427)
                      +.|+..+ +.+|..+..+.  ..+++++++||+ .++....    ..   .                ..+.+.+.. ...
T Consensus       155 ~~Y~~~k-~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~  233 (346)
T d1ek6a_         155 NPYGKSK-FFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTE  233 (346)
T ss_dssp             SHHHHHH-HHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSS
T ss_pred             ChHHHHH-HHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCC
Confidence            3444443 45677666554  468999999985 2221110    00   0                011111211 111


Q ss_pred             CC---CCcccHHHHHHHHHHHhcCc-ccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          199 AN---DYKVAKSQIASLVADVFSNT-AVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       199 ~~---~~~i~v~DVA~~v~~al~~~-~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      .+   .+++|++|+|.++..++... ....+++|||+++.   ..++.|++..+.+.
T Consensus       234 ~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~---~~s~~dl~~~i~~~  287 (346)
T d1ek6a_         234 DGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGT---GYSVLQMVQAMEKA  287 (346)
T ss_dssp             SSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSC---CEEHHHHHHHHHHH
T ss_pred             CCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCC---cccHHHHHHHHHHH
Confidence            11   15899999999988765432 22356799999988   56666677666554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.88  E-value=8.2e-23  Score=195.14  Aligned_cols=227  Identities=11%  Similarity=0.113  Sum_probs=148.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH--HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA--QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~--~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      .++||||||||||||++|+++|+++||+|++++|+....  .....       +......+++++.+|+.|.+.+.+++.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~-------~~~~~~~~v~~v~~d~~d~~~~~~~~~   74 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-------LLYFKQLGAKLIEASLDDHQRLVDALK   74 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-------HHHHHTTTCEEECCCSSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHH-------HhhhccCCcEEEEeecccchhhhhhcc
Confidence            456899999999999999999999999999999987532  11111       011123467799999999999999999


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHH
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL  160 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l  160 (427)
                      +++++|++++...    ...+..+..+++++|...+..++++.||.+++.....   .+..+ . ..+..    ......
T Consensus        75 ~~~~~~~~~~~~~----~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~---~~~~~-~-~~~~~----~~~~~~  141 (312)
T d1qyda_          75 QVDVVISALAGGV----LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIME---HALQP-G-SITFI----DKRKVR  141 (312)
T ss_dssp             TCSEEEECCCCSS----SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCC---CCCSS-T-THHHH----HHHHHH
T ss_pred             Ccchhhhhhhhcc----cccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcc---cccch-h-hhhhH----HHHHHH
Confidence            9999999988653    3344457788999999998777777776654322111   11111 1 11111    122233


Q ss_pred             HHHhcCCCeEEEEeCC-CCCCC---CCCC-------ccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcE-E
Q 044905          161 QKVIETDVSYTFIKTS-LTEDF---SPES-------SYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKV-V  228 (427)
Q Consensus       161 ~~l~~~gl~~tilRPG-~~~~~---~~~~-------~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~-~  228 (427)
                      +.....+++|+++||+ +++.+   ....       ...+...+.  .....++||++|+|++++.++.+++ ..++. +
T Consensus       142 ~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~i~v~Dva~a~~~~l~~~~-~~~~~~~  218 (312)
T d1qyda_         142 RAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGD--GNVKGIWVDEDDVGTYTIKSIDDPQ-TLNKTMY  218 (312)
T ss_dssp             HHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTT--SCSEEEEECHHHHHHHHHHHTTCGG-GSSSEEE
T ss_pred             HhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccc--cccccceeeHHHHHHHHHHHhcCcc-ccCceEE
Confidence            3444689999999996 33211   1111       111222222  2223469999999999999998764 45665 4


Q ss_pred             EEecCCCCChhhHHHHHHHHHhccchh
Q 044905          229 KVFTDPSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       229 nI~~~~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      +++++.   ..++.++++.+.+..++.
T Consensus       219 ~~~~~~---~~s~~e~~~~~~~~~g~~  242 (312)
T d1qyda_         219 IRPPMN---ILSQKEVIQIWERLSEQN  242 (312)
T ss_dssp             CCCGGG---EEEHHHHHHHHHHHHTCC
T ss_pred             EeCCCc---CCCHHHHHHHHHHHHCCC
Confidence            555555   467788888877654443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.88  E-value=1.9e-22  Score=197.90  Aligned_cols=238  Identities=12%  Similarity=0.079  Sum_probs=154.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +.++|||||||||||++|+++|+++||+|++++|+.++...+.......     ........+.+|+.|.+++.+++.++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~~~~~~~~~~~~~   84 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-----YPGRFETAVVEDMLKQGAYDEVIKGA   84 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----STTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcc-----ccccccEEEeccccchhhhhhhcccc
Confidence            3469999999999999999999999999999999987665554322110     01123345779999999999999999


Q ss_pred             CEEEEccCCCCCCC----CccccHHHHHHHHHHHHHc-CCCeEEEEecccccccccCCCC--------------------
Q 044905           83 GKVVVTIGPTEDGP----TSEVSTSDAFQVIQAAQLA-GVGHVAIIYDGNTTAASTYNVL--------------------  137 (427)
Q Consensus        83 d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~Aa~~~-gVk~~V~vSSs~v~~~~~~~~~--------------------  137 (427)
                      |.|+|+++......    ....|+.++.+++++|.+. ++++|||+||++..........                    
T Consensus        85 ~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  164 (342)
T d1y1pa1          85 AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTL  164 (342)
T ss_dssp             SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHS
T ss_pred             hhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccc
Confidence            99999998765432    4466888999999999987 6999999998764332221110                    


Q ss_pred             -CCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCC-CCCCCCCC----C-ccceE---Eeccc----ccCCC
Q 044905          138 -DGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTS-LTEDFSPE----S-SYNVV---VSAEA----SVDAN  200 (427)
Q Consensus       138 -~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG-~~~~~~~~----~-~~~i~---~~~~~----~~~~~  200 (427)
                       +..+......|+.++ ..+|.++..+.   ..+++++++||+ .++....+    . ...+.   ..+..    .....
T Consensus       165 ~e~~~~~p~~~Y~~sK-~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  243 (342)
T d1y1pa1         165 PESDPQKSLWVYAASK-TEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPP  243 (342)
T ss_dssp             CTTSTTHHHHHHHHHH-HHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCS
T ss_pred             cccCCCCCcCcccchh-HhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccc
Confidence             001111123455444 45666665544   346889999986 22221111    0 00000   01110    11222


Q ss_pred             CCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          201 DYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      .+++|++|+|++++.++.++ . .+..++++++.   ..++.|+++.|.+.
T Consensus       244 ~~~v~v~Dva~~~i~~l~~~-~-~~g~~~~~~~~---~~t~~eia~~i~k~  289 (342)
T d1y1pa1         244 QYYVSAVDIGLLHLGCLVLP-Q-IERRRVYGTAG---TFDWNTVLATFRKL  289 (342)
T ss_dssp             EEEEEHHHHHHHHHHHHHCT-T-CCSCEEEECCE---EECHHHHHHHHHHH
T ss_pred             eeeeeHHHHHHHHHHhhcCc-c-ccceEEEEcCC---ceEHHHHHHHHHHH
Confidence            36899999999999988865 3 34445677776   56667777776543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=6.5e-22  Score=194.08  Aligned_cols=237  Identities=11%  Similarity=0.074  Sum_probs=156.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +|+|||||||||||++|+++|+++|++|+++++... ....+....       .....+++++.+|++|.+.+..++.  
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~-------~~~~~~v~~~~~Dl~d~~~l~~~~~~~   73 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLE-------VLTKHHIPFYEVDLCDRKGLEKVFKEY   73 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHH-------HHHTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHH-------hhcccCCeEEEeecCCHHHHHHHHhcc
Confidence            357999999999999999999999999999976432 112221110       0113567899999999999999887  


Q ss_pred             CcCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCC-----CCCCCccchhhh
Q 044905           81 NAGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNV-----LDGISSFFNNLF  148 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~-----~~~~~~~~~~~~  148 (427)
                      ++|+|||+|+....     .  ....+|+.++.+++++|++.++++||++||+.+|+......     .+..+....+.|
T Consensus        74 ~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y  153 (347)
T d1z45a2          74 KIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPY  153 (347)
T ss_dssp             CCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHH
T ss_pred             CCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChh
Confidence            78999999997642     1  14568899999999999999999999999999986543211     111222233567


Q ss_pred             hccccccHHHHHHHHh---cCCCeEEEEeCC-CCCCCC-------CCCcc----------------ceEEeccccc-CC-
Q 044905          149 SRNQPLTVPEFLQKVI---ETDVSYTFIKTS-LTEDFS-------PESSY----------------NVVVSAEASV-DA-  199 (427)
Q Consensus       149 ~k~~~l~~E~~l~~l~---~~gl~~tilRPG-~~~~~~-------~~~~~----------------~i~~~~~~~~-~~-  199 (427)
                      +.++ ...|.++..+.   ..+++++++||+ .++...       .....                .+.+.+.+.. .. 
T Consensus       154 ~~sK-~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~  232 (347)
T d1z45a2         154 GHTK-YAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDG  232 (347)
T ss_dssp             HHHH-HHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCS
T ss_pred             HhHH-HHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCC
Confidence            7665 66888777664   457999999974 221100       00000                0111111110 00 


Q ss_pred             --CCCcccHHHHHHHHHHHhcCc-----ccccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          200 --NDYKVAKSQIASLVADVFSNT-----AVAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       200 --~~~~i~v~DVA~~v~~al~~~-----~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                        -.+++++.|++.+++.++...     ....+++||++++.   ..++.+++..+.+.
T Consensus       233 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~---~~s~~e~~~~i~~~  288 (347)
T d1z45a2         233 TPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK---GSTVFEVYHAFCKA  288 (347)
T ss_dssp             SCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC---CEEHHHHHHHHHHH
T ss_pred             ceeeeeeeeecccccccccccccccccccccccccceecCCC---cccHHHHHHHHHHH
Confidence              115778888888877766422     12346889999988   45566666665554

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.5e-23  Score=193.76  Aligned_cols=201  Identities=17%  Similarity=0.197  Sum_probs=139.9

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ||++++|+|||||||+|++|+++|+++|+  +|++++|++......             ...++++..+|+.+.+.+.++
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-------------~~~~i~~~~~D~~~~~~~~~~   77 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------AYKNVNQEVVDFEKLDDYASA   77 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------GGGGCEEEECCGGGGGGGGGG
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-------------ccceeeeeeeccccccccccc
Confidence            47788999999999999999999999994  899999987542111             134567888999999999999


Q ss_pred             hcCcCEEEEccCCCCCC----CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccc
Q 044905           79 IGNAGKVVVTIGPTEDG----PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPL  154 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l  154 (427)
                      +.++|+|||++|.....    .+..+|+.++.+++++|...|+++||++||.+.+...            .+.|.+.+ .
T Consensus        78 ~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~------------~~~Y~~~K-~  144 (232)
T d2bkaa1          78 FQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS------------NFLYLQVK-G  144 (232)
T ss_dssp             GSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHH-H
T ss_pred             ccccccccccccccccccchhhhhhhcccccceeeecccccCccccccCCccccccCc------------cchhHHHH-H
Confidence            99999999999865321    1457788899999999999999999999988743211            12344443 2


Q ss_pred             cHHHHHHHHhcCCCe-EEEEeCC-CCCCCCCCCcc----ceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEE
Q 044905          155 TVPEFLQKVIETDVS-YTFIKTS-LTEDFSPESSY----NVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVV  228 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~-~tilRPG-~~~~~~~~~~~----~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~  228 (427)
                      .+|   +.+.+.+++ ++||||| ++++.......    ...+............|+++|+|++++.++.++.  .++.+
T Consensus       145 ~~E---~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~--~~~~~  219 (232)
T d2bkaa1         145 EVE---AKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQME  219 (232)
T ss_dssp             HHH---HHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEE
T ss_pred             Hhh---hccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc--cCCeE
Confidence            345   444567875 9999998 44442211000    0001111111122257999999999998886542  45665


Q ss_pred             EEec
Q 044905          229 KVFT  232 (427)
Q Consensus       229 nI~~  232 (427)
                      .+.+
T Consensus       220 i~~~  223 (232)
T d2bkaa1         220 LLEN  223 (232)
T ss_dssp             EEEH
T ss_pred             EEcH
Confidence            5544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1e-21  Score=191.78  Aligned_cols=229  Identities=11%  Similarity=0.067  Sum_probs=154.1

Q ss_pred             CEE-EEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-----HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTV-FVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-----AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kI-lItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-----~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +|| ||||||||||++|+++|+++||+|++++|.++.     .+.+....      ......+++++.+|++|.+.+..+
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~   74 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP------QAHIEGNMKLHYGDLTDSTCLVKI   74 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------CEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhch------hhhccCCcEEEEeecCCchhhHHH
Confidence            578 999999999999999999999999999997642     11111000      001135678999999999999999


Q ss_pred             hc--CcCEEEEccCCCCCC-----C--CccccHHHHHHHHHHHHHcCCC---eEEEEecccccccccCCCC-CCCCccch
Q 044905           79 IG--NAGKVVVTIGPTEDG-----P--TSEVSTSDAFQVIQAAQLAGVG---HVAIIYDGNTTAASTYNVL-DGISSFFN  145 (427)
Q Consensus        79 l~--g~d~Vi~~ag~~~~~-----~--~~~vn~~~~~~ll~Aa~~~gVk---~~V~vSSs~v~~~~~~~~~-~~~~~~~~  145 (427)
                      +.  ++++++|+++.....     +  ..++|+.++.+++++|+++++.   +|||+||+++|+.....+. +..+..+.
T Consensus        75 ~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~  154 (347)
T d1t2aa_          75 INEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR  154 (347)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC
T ss_pred             HhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC
Confidence            86  467899888765321     1  3478888999999999998764   8999999999865433222 22222334


Q ss_pred             hhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC----------------ccceEEecccccCCCCCcccHH
Q 044905          146 NLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES----------------SYNVVVSAEASVDANDYKVAKS  207 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~----------------~~~i~~~~~~~~~~~~~~i~v~  207 (427)
                      +.|+.++ +++|.++..+. ..+++++++||+ .+++.....                ...+...+.+...  .+++|++
T Consensus       155 ~~Yg~sK-~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~--r~~i~v~  231 (347)
T d1t2aa_         155 SPYGAAK-LYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK--RDWGHAK  231 (347)
T ss_dssp             SHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCE--ECCEEHH
T ss_pred             CHHHHHH-HHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcce--eeeeEec
Confidence            5677766 77888887755 568999999985 333321110                0111122222211  2689999


Q ss_pred             HHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHH
Q 044905          208 QIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAI  248 (427)
Q Consensus       208 DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i  248 (427)
                      |+++++..++.+.   ....++++...   ..++.+....+
T Consensus       232 D~~~a~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~  266 (347)
T d1t2aa_         232 DYVEAMWLMLQND---EPEDFVIATGE---VHSVREFVEKS  266 (347)
T ss_dssp             HHHHHHHHHHHSS---SCCCEEECCSC---CEEHHHHHHHH
T ss_pred             HHHHHHHHHhhcC---CCccceecccc---ccccchhhhhh
Confidence            9999999998754   34667788777   44445554444

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.87  E-value=3.5e-21  Score=188.88  Aligned_cols=223  Identities=13%  Similarity=0.113  Sum_probs=150.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~   80 (427)
                      +.+++|+|||||||||++|++.|+++||+|++++|++++...... .         ...+++++.+|+.| .+.+..++.
T Consensus         1 ~~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~-~---------~~~~v~~~~gD~~d~~~~~~~a~~   70 (350)
T d1xgka_           1 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-Q---------AIPNVTLFQGPLLNNVPLMDTLFE   70 (350)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-H---------TSTTEEEEESCCTTCHHHHHHHHT
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh-c---------ccCCCEEEEeeCCCcHHHHHHHhc
Confidence            357899999999999999999999999999999999876432110 0         12456799999988 456778999


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHH
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL  160 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l  160 (427)
                      +++.++++....     ...+...+.+++++|..+|+.++++.||.+....  .......+     ++ ..    .....
T Consensus        71 ~~~~~~~~~~~~-----~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~--~~~~~~~~-----~~-~~----k~~~~  133 (350)
T d1xgka_          71 GAHLAFINTTSQ-----AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSL--YGPWPAVP-----MW-AP----KFTVE  133 (350)
T ss_dssp             TCSEEEECCCST-----TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGG--TSSCCCCT-----TT-HH----HHHHH
T ss_pred             CCceEEeecccc-----cchhhhhhhHHHHHHHHhCCCceEEEeecccccc--CCcccchh-----hh-hh----HHHHH
Confidence            999999876543     3455668899999999999988887777653211  11111111     11 11    11222


Q ss_pred             HHHhcCCCeEEEEeCC-CCCCCCCCCcc----------ceEEecccccCCCCCcccH-HHHHHHHHHHhcC-cccccCcE
Q 044905          161 QKVIETDVSYTFIKTS-LTEDFSPESSY----------NVVVSAEASVDANDYKVAK-SQIASLVADVFSN-TAVAENKV  227 (427)
Q Consensus       161 ~~l~~~gl~~tilRPG-~~~~~~~~~~~----------~i~~~~~~~~~~~~~~i~v-~DVA~~v~~al~~-~~~~~g~~  227 (427)
                      ..+.+.+++|+++||+ +++++......          ......+.....+.+++++ +|||+++..++.+ ++.+.|+.
T Consensus       134 ~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~  213 (350)
T d1xgka_         134 NYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHR  213 (350)
T ss_dssp             HHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCE
T ss_pred             HHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeE
Confidence            3445788999999998 55544322111          0111112223333456765 7999999998864 34567899


Q ss_pred             EEEecCCCCChhhHHHHHHHHHhccchh
Q 044905          228 VKVFTDPSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       228 ~nI~~~~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      |+++++    ..++.|+++.+.+..|++
T Consensus       214 ~~~~g~----~~T~~eia~~l~~~~G~~  237 (350)
T d1xgka_         214 IALTFE----TLSPVQVCAAFSRALNRR  237 (350)
T ss_dssp             EEECSE----EECHHHHHHHHHHHHTSC
T ss_pred             EEEeCC----cCCHHHHHHHHHHHHCCc
Confidence            999876    578888888888876544

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=4.5e-21  Score=191.01  Aligned_cols=234  Identities=11%  Similarity=0.064  Sum_probs=145.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc-----------------chHHHHHHHHhhhhhhhhhhhccceEEEe
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL-----------------GAAQELARLAASYKILSKEELKRLNAVES   67 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~-----------------~~~~~l~~~~~~~~~~~~~~~~rl~vv~g   67 (427)
                      |+|||||||||||++|+++|+++||+|++++.-.                 +....+..       +.....++++++.+
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~i~~~~~   74 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR-------WKALTGKSIELYVG   74 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHH-------HHHHHCCCCEEEES
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHH-------HHhhcCCCcEEEEc
Confidence            7999999999999999999999999999986210                 00011111       01112357889999


Q ss_pred             cCCCHHHHHHHhcC--cCEEEEccCCCCC-----CC-----CccccHHHHHHHHHHHHHcCCCe-EEEEecccccccccC
Q 044905           68 NFDSAESIAKAIGN--AGKVVVTIGPTED-----GP-----TSEVSTSDAFQVIQAAQLAGVGH-VAIIYDGNTTAASTY  134 (427)
Q Consensus        68 Dl~D~~sl~~al~g--~d~Vi~~ag~~~~-----~~-----~~~vn~~~~~~ll~Aa~~~gVk~-~V~vSSs~v~~~~~~  134 (427)
                      |++|.+.+.+++.+  .|+|||+|+....     ++     .+..|+.++.+++++|++.++++ +++.||..+++....
T Consensus        75 Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~  154 (393)
T d1i24a_          75 DICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNI  154 (393)
T ss_dssp             CTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSS
T ss_pred             cCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccc
Confidence            99999999999985  5999999986432     11     35678999999999999998765 555555554433222


Q ss_pred             CCCCC--------------CCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC--------------
Q 044905          135 NVLDG--------------ISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE--------------  184 (427)
Q Consensus       135 ~~~~~--------------~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~--------------  184 (427)
                      ...+.              .+..+.+.|+.++ +.+|.++..+. +.+++++++||+ .++.....              
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK-~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~  233 (393)
T d1i24a_         155 DIEEGYITITHNGRTDTLPYPKQASSFYHLSK-VHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  233 (393)
T ss_dssp             CBCSSEEEEEETTEEEEEECCCCCCSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             ccccccccccccccccccccccccccHHHHHh-hhhcccccccccccceeeeecccccccCCCccccccccccccccccc
Confidence            11111              1112224566655 66888877665 679999999985 22211100              


Q ss_pred             Cc---------------cceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEE-ecCCCCChhhHHHHHHHH
Q 044905          185 SS---------------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKV-FTDPSAPARRVDELFSAI  248 (427)
Q Consensus       185 ~~---------------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI-~~~~~~~~~s~~ell~~i  248 (427)
                      ..               ..+.+.+.+...  .+++|++|+++++..++.+.. ..+....+ .++...+...+.+++..+
T Consensus       234 ~~~~~~i~~~~~~~~~~~~~~i~g~~~~~--rd~v~v~D~~~a~~~~~~~~~-~~g~~~~~~~~~~~~si~el~~~i~~~  310 (393)
T d1i24a_         234 AVFGTALNRFCVQAAVGHPLTVYGKGGQT--RGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFTEQFSVNELASLVTKA  310 (393)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCE--EEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred             cccccchhhhhHHhhcCCeeEEeeecccc--cccccccchHHHHHHHHHhhc-ccceeeeecCCCCeeEHHHHHHHHHHH
Confidence            00               012222222221  268999999999999997653 23333222 233322334455555554


Q ss_pred             H
Q 044905          249 A  249 (427)
Q Consensus       249 ~  249 (427)
                      .
T Consensus       311 ~  311 (393)
T d1i24a_         311 G  311 (393)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.86  E-value=3.3e-21  Score=186.40  Aligned_cols=234  Identities=12%  Similarity=0.124  Sum_probs=152.4

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc--chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc-
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL--GAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA-   82 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~-   82 (427)
                      ||||||||||||++|++.|+++||+|+++++-.  .....+...         ....+++++.+|++|.+.+.++++++ 
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~---------~~~~~~~~i~~Di~~~~~l~~~~~~~~   72 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWL---------SSLGNFEFVHGDIRNKNDVTRLITKYM   72 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHH---------HTTCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHh---------hccCCcEEEEcccCCHHHHHHHHHhcC
Confidence            799999999999999999999999999987422  222222211         11467889999999999999999875 


Q ss_pred             -CEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccC-CCC---CC-----------
Q 044905           83 -GKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTY-NVL---DG-----------  139 (427)
Q Consensus        83 -d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~-~~~---~~-----------  139 (427)
                       |+|||+++....     +  ...++|+.|+.+|+++|...+++++++.||++.+.+... ...   +.           
T Consensus        73 ~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (338)
T d1orra_          73 PDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGY  152 (338)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred             CceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCc
Confidence             999999987653     1  145789999999999999999988877777664333221 100   00           


Q ss_pred             ---CCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCC--------------------ccceEEecc
Q 044905          140 ---ISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPES--------------------SYNVVVSAE  194 (427)
Q Consensus       140 ---~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~--------------------~~~i~~~~~  194 (427)
                         ........|+..+ ...|.+..... ..++..+++|+. .+.......                    ...+.+.+.
T Consensus       153 ~~~~~~~~~~~y~~~k-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  231 (338)
T d1orra_         153 DESTQLDFHSPYGCSK-GAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGN  231 (338)
T ss_dssp             CTTSCCCCCHHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESS
T ss_pred             ccCCcccccccccccc-chhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCC
Confidence               0000112333332 33555554433 568888888853 211111100                    011223232


Q ss_pred             cccCCCCCcccHHHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHhcc
Q 044905          195 ASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAEDG  252 (427)
Q Consensus       195 ~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~~~  252 (427)
                      +...  .+++|++|++++++.++.++....++++++..+... ..++.+++..+.+..
T Consensus       232 g~~~--r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~-~~s~~e~~~~i~~~~  286 (338)
T d1orra_         232 GKQV--RDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVN-SLSLLELFKLLEDYC  286 (338)
T ss_dssp             SCCE--EECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGG-EEEHHHHHHHHHHHH
T ss_pred             Ccee--EeeecccchhhHHHHHHhccccccCccccccccccc-cccHHHHHHHHHHHH
Confidence            2222  258999999999999998765567899999665322 356778887776543

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.86  E-value=1.5e-20  Score=186.74  Aligned_cols=244  Identities=11%  Similarity=0.043  Sum_probs=156.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEec---Cc------chHHHHHHHHhhh-hhhhhhhhccceEEEecCCCH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVP---EL------GAAQELARLAASY-KILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R---~~------~~~~~l~~~~~~~-~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      .|+|||||||||||++|+++||+ .||+|+++++   +.      ............. .........++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            47999999999999999999996 6899999873   11      1112111111000 000111234678999999999


Q ss_pred             HHHHHHhc---CcCEEEEccCCCCCC-------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-----
Q 044905           73 ESIAKAIG---NAGKVVVTIGPTEDG-------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-----  137 (427)
Q Consensus        73 ~sl~~al~---g~d~Vi~~ag~~~~~-------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-----  137 (427)
                      +.+.++++   ++|+|||+|+.....       ...++|+.++.+++++++..++++++++||++++........     
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  161 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE  161 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred             HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence            99998885   689999999976531       146788999999999999999999999998887654433211     


Q ss_pred             ---CCCCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc--------------------------
Q 044905          138 ---DGISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS--------------------------  186 (427)
Q Consensus       138 ---~~~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~--------------------------  186 (427)
                         +..+..+.+.|+.++ +..|.++..+. ..|++++++||+ .++.......                          
T Consensus       162 ~~~e~~~~~p~~~Y~~sK-~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~  240 (383)
T d1gy8a_         162 PIDINAKKSPESPYGESK-LIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ  240 (383)
T ss_dssp             CBCTTSCCBCSSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred             ccccccCCCCCCHHHhhH-hHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence               111112234566665 66888887766 469999999984 2221111000                          


Q ss_pred             -----------cceEEecccc-cCCC---CCcccHHHHHHHHHHHhcCc-------ccccCcEEEEecCCCCChhhHHHH
Q 044905          187 -----------YNVVVSAEAS-VDAN---DYKVAKSQIASLVADVFSNT-------AVAENKVVKVFTDPSAPARRVDEL  244 (427)
Q Consensus       187 -----------~~i~~~~~~~-~~~~---~~~i~v~DVA~~v~~al~~~-------~~~~g~~~nI~~~~~~~~~s~~el  244 (427)
                                 ..+.+.+... ...+   .+++|++|+|+++..++...       ....+.+|||+++.   ..++.|+
T Consensus       241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~---~~s~~el  317 (383)
T d1gy8a_         241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR---GYSVREV  317 (383)
T ss_dssp             ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC---CEEHHHH
T ss_pred             cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCC---ceeHHHH
Confidence                       0011111100 0011   15899999999998877532       12346799999988   4555666


Q ss_pred             HHHHHhc
Q 044905          245 FSAIAED  251 (427)
Q Consensus       245 l~~i~~~  251 (427)
                      +..+.+.
T Consensus       318 ~~~i~~~  324 (383)
T d1gy8a_         318 IEVARKT  324 (383)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6665543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.84  E-value=8e-21  Score=184.57  Aligned_cols=232  Identities=10%  Similarity=0.037  Sum_probs=147.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-----HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-----AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-----~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++++||||||||||+||++.|+++||+|++++|..+.     ...+....      ......+++++.+|+++.+.+.+.
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~Di~~~~~~~~~   74 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDP------HNVNKALMKLHYADLTDASSLRRW   74 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------CCEEEEECCTTCHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhh------hhccccceEEEEccccCHHHHHHH
Confidence            4689999999999999999999999999999996531     11111000      001134567899999999999998


Q ss_pred             hc--CcCEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcC-----CCeEEEEecccccccccCCCCCCCCccc
Q 044905           79 IG--NAGKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAG-----VGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        79 l~--g~d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~g-----Vk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                      +.  ++|+|||+|+....     .+  ....|..++.+++++++..+     ..++++.||+.++........+..+..+
T Consensus        75 ~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p  154 (339)
T d1n7ha_          75 IDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHP  154 (339)
T ss_dssp             HHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCC
T ss_pred             HhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCC
Confidence            86  57999999987543     11  45677778999999987643     3345555555544333222222233333


Q ss_pred             hhhhhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCCCc----------------cceEEecccccCCCCCcccH
Q 044905          145 NNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPESS----------------YNVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~~~----------------~~i~~~~~~~~~~~~~~i~v  206 (427)
                      .+.|+.++ +..|.++..+. ..+++++++||+ .+++......                ......+.+...  .+++|+
T Consensus       155 ~~~Y~~sK-~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~--rd~~~v  231 (339)
T d1n7ha_         155 RSPYAASK-CAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS--RDWGFA  231 (339)
T ss_dssp             CSHHHHHH-HHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE--EECEEH
T ss_pred             cchhhHHH-HHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcc--ccceee
Confidence            45566555 66888776665 568999999985 3333222100                011122222222  258999


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      +|+|+++..++.++   ....+++..+.   ..++.+++..+..
T Consensus       232 ~D~a~~~~~~~~~~---~~~~~~~~~~~---~~s~~~~~~~~~~  269 (339)
T d1n7ha_         232 GDYVEAMWLMLQQE---KPDDYVVATEE---GHTVEEFLDVSFG  269 (339)
T ss_dssp             HHHHHHHHHHHTSS---SCCEEEECCSC---EEEHHHHHHHHHH
T ss_pred             ehHHHHHHHHHhcC---CCCcccccccc---ccccchhhhhhhh
Confidence            99999999998864   24556666666   3455555555544

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.4e-20  Score=181.32  Aligned_cols=216  Identities=14%  Similarity=0.106  Sum_probs=149.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      +++|||||||||||++|++.|+++|+.|+++.+..                           ..|+.|.+.+.+.+.  .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------------~~~~~~~~~~~~~~~~~~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASER   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------------hccccCHHHHHHHHhhcC
Confidence            46899999999999999999999999988765432                           137788888888876  4


Q ss_pred             cCEEEEccCCCCCC--------CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCC------CCCccchhh
Q 044905           82 AGKVVVTIGPTEDG--------PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLD------GISSFFNNL  147 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~--------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~------~~~~~~~~~  147 (427)
                      +|.|||+++.....        .....|+.++.+++++|.++++++|||+||+++|+........      ..+.+....
T Consensus        55 ~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~  134 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEP  134 (315)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHH
T ss_pred             CCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCH
Confidence            89999998765431        1457889999999999999999999999999998764432211      111222345


Q ss_pred             hhccccccHHHHHHHHh-cCCCeEEEEeCC-CCCC---CCCCC------------------ccceEEecccccCCCCCcc
Q 044905          148 FSRNQPLTVPEFLQKVI-ETDVSYTFIKTS-LTED---FSPES------------------SYNVVVSAEASVDANDYKV  204 (427)
Q Consensus       148 ~~k~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~---~~~~~------------------~~~i~~~~~~~~~~~~~~i  204 (427)
                      |+.++ +.+|.++..+. +.|++++++||+ .++.   +....                  ...+...+.+...  ..++
T Consensus       135 Y~~sK-~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~--~~~~  211 (315)
T d1e6ua_         135 YAIAK-IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM--REFL  211 (315)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE--ECEE
T ss_pred             HHHHH-HHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceE--EEEE
Confidence            77665 77888887766 569999999985 3322   11110                  0112222322222  2589


Q ss_pred             cHHHHHHHHHHHhcCcc-------cccCcEEEEecCCCCChhhHHHHHHHHH
Q 044905          205 AKSQIASLVADVFSNTA-------VAENKVVKVFTDPSAPARRVDELFSAIA  249 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~-------~~~g~~~nI~~~~~~~~~s~~ell~~i~  249 (427)
                      |++|++.++..++.+..       ......++++.+...+...+.+++..+.
T Consensus       212 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~  263 (315)
T d1e6ua_         212 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVV  263 (315)
T ss_dssp             EHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHH
T ss_pred             EeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHh
Confidence            99999999998876532       1235678888887444444444444443

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.84  E-value=1.3e-20  Score=178.24  Aligned_cols=225  Identities=16%  Similarity=0.225  Sum_probs=146.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .++||||||||||||++|++.|+++||+|++++|++..........    .+......+++++.+|+.+..++...+.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~   77 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQ----LLESFKASGANIVHGSIDDHASLVEAVKNV   77 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHH----HHHHHHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHH----HHHhhccCCcEEEEeecccchhhhhhhhhc
Confidence            3678999999999999999999999999999999876432111100    011122346679999999999999999999


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHH
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK  162 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~  162 (427)
                      +.|+|+++..      ...  +..++++++..++++++++.||.+......    .... .....+. .    .......
T Consensus        78 ~~vi~~~~~~------~~~--~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~----~~~~-~~~~~~~-~----~~~~~~~  139 (307)
T d1qyca_          78 DVVISTVGSL------QIE--SQVNIIKAIKEVGTVKRFFPSEFGNDVDNV----HAVE-PAKSVFE-V----KAKVRRA  139 (307)
T ss_dssp             SEEEECCCGG------GSG--GGHHHHHHHHHHCCCSEEECSCCSSCTTSC----CCCT-THHHHHH-H----HHHHHHH
T ss_pred             eeeeeccccc------ccc--hhhHHHHHHHHhccccceeeeccccccccc----cccc-ccccccc-c----cccccch
Confidence            9999988643      222  557899999999999988777655322111    1111 1111111 0    1223334


Q ss_pred             HhcCCCeEEEEeCC-CCCC---CCCC----C--ccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccccCcEE-EEe
Q 044905          163 VIETDVSYTFIKTS-LTED---FSPE----S--SYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVV-KVF  231 (427)
Q Consensus       163 l~~~gl~~tilRPG-~~~~---~~~~----~--~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~~g~~~-nI~  231 (427)
                      +.+.+++++++||+ ++++   ....    .  ...+...+.  .....++||++|+|++++.++.+++ ..++.+ +++
T Consensus       140 ~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~~~~~  216 (307)
T d1qyca_         140 IEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGD--GNARVVFVKEEDIGTFTIKAVDDPR-TLNKTLYLRL  216 (307)
T ss_dssp             HHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETT--SCCEEEEECHHHHHHHHHTTSSCGG-GTTEEEECCC
T ss_pred             hhccCCCceecccceecCCCccchhhhhhhhhhcccceeeec--ccccccCCcHHHHHHHHHHHhcChh-hcCceeEEeC
Confidence            44689999999996 2211   1110    0  111222222  2223469999999999999998764 456654 455


Q ss_pred             cCCCCChhhHHHHHHHHHhccchh
Q 044905          232 TDPSAPARRVDELFSAIAEDGRRA  255 (427)
Q Consensus       232 ~~~~~~~~s~~ell~~i~~~~~~~  255 (427)
                      +++   ..++.|++..+.+..|+.
T Consensus       217 ~~~---~~s~~ei~~~~~~~~G~~  237 (307)
T d1qyca_         217 PAN---TLSLNELVALWEKKIDKT  237 (307)
T ss_dssp             GGG---EEEHHHHHHHHHHHTTSC
T ss_pred             CCC---ccCHHHHHHHHHHHHCCC
Confidence            655   577888888888765544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.76  E-value=6.9e-19  Score=160.45  Aligned_cols=180  Identities=17%  Similarity=0.157  Sum_probs=117.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-c
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-G   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-~   80 (427)
                      +++|||||||||+|++|+++|+++|+  +|++++|++...                 .   .-+..+..|...+...+ .
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------------~---~~~~~~~~d~~~~~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------------H---PRLDNPVGPLAELLPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------------C---TTEECCBSCHHHHGGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------------c---ccccccccchhhhhhcccc
Confidence            47999999999999999999999997  677777765321                 0   12344555655444444 4


Q ss_pred             CcCEEEEccCCCCC-----CCCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCccchhhhhcccccc
Q 044905           81 NAGKVVVTIGPTED-----GPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLT  155 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-----~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~  155 (427)
                      .+|+|||++|....     ..+...++.++.+++++|+..++++++++||.+++...            .+.|.+.+ ..
T Consensus        62 ~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~------------~~~y~~~K-~~  128 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS------------SIFYNRVK-GE  128 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC------------SSHHHHHH-HH
T ss_pred             chheeeeeeeeeccccccccccccchhhhhhhccccccccccccccccccccccccc------------ccchhHHH-HH
Confidence            58999999986532     12456778899999999999999999999987753221            12344332 22


Q ss_pred             HHHHHHHHhcCCC-eEEEEeCCC-CCCCCCCCccceEEecccc--cCCCCCcccHHHHHHHHHHHhcCc
Q 044905          156 VPEFLQKVIETDV-SYTFIKTSL-TEDFSPESSYNVVVSAEAS--VDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       156 ~E~~l~~l~~~gl-~~tilRPG~-~~~~~~~~~~~i~~~~~~~--~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      .|   +.+.+.++ +|+|+||++ +++.......... .....  .....++||++|+|++++.++.++
T Consensus       129 ~E---~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         129 LE---QALQEQGWPQLTIARPSLLFGPREEFRLAEIL-AAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HH---HHHTTSCCSEEEEEECCSEESTTSCEEGGGGT-TCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             Hh---hhccccccccceeeCCcceeCCcccccHHHHH-HHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            44   45556777 599999983 3332111000000 00000  001124699999999999988754

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.76  E-value=1.6e-18  Score=169.13  Aligned_cols=236  Identities=10%  Similarity=-0.024  Sum_probs=142.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--   81 (427)
                      .|+|||||||||||++|++.|+++||+|++++|+..+...+.....        ..++++++.+|++|++.+.+++..  
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~i~~~~~Dl~d~~~l~~~~~~~~   79 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------VADGMQSEIGDIRDQNKLLESIREFQ   79 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------TTTTSEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh--------cccCCeEEEeeccChHhhhhhhhhch
Confidence            4799999999999999999999999999999998875433322111        134678999999999999999874  


Q ss_pred             cCEEEEccCCCCC-----C--CCccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCC-CC-C-CCCccchhhhhcc
Q 044905           82 AGKVVVTIGPTED-----G--PTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYN-VL-D-GISSFFNNLFSRN  151 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~--~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~-~~-~-~~~~~~~~~~~k~  151 (427)
                      .++|+|+++....     .  ....+|+.++.+++++|...+...+++.+|++.+...... .. + ..+..+...|+..
T Consensus        80 ~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~  159 (356)
T d1rkxa_          80 PEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNS  159 (356)
T ss_dssp             CSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHH
T ss_pred             hhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccc
Confidence            6899999987543     1  1566788899999999999876555555555443322211 11 1 1111112233322


Q ss_pred             ccccHHHHHHHHh----------cCCCeEEEEeCC-CCCCCCCC--Cc----------cceEEecccccCCCCCcccHHH
Q 044905          152 QPLTVPEFLQKVI----------ETDVSYTFIKTS-LTEDFSPE--SS----------YNVVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       152 ~~l~~E~~l~~l~----------~~gl~~tilRPG-~~~~~~~~--~~----------~~i~~~~~~~~~~~~~~i~v~D  208 (427)
                      + ...|..+..+.          ..++.++++||+ .+++....  ..          ......+...  ....++|++|
T Consensus       160 k-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~v~D  236 (356)
T d1rkxa_         160 K-GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPH--AIRPWQHVLE  236 (356)
T ss_dssp             H-HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTT--CEECCEETHH
T ss_pred             c-ccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecc--cccccccccc
Confidence            2 22343333221          347899999996 33322111  00          0011111111  1125899999


Q ss_pred             HHHHHHHHhcCcc---cccCcEEEEecCCCCChhhHHHHHHHHHhc
Q 044905          209 IASLVADVFSNTA---VAENKVVKVFTDPSAPARRVDELFSAIAED  251 (427)
Q Consensus       209 VA~~v~~al~~~~---~~~g~~~nI~~~~~~~~~s~~ell~~i~~~  251 (427)
                      ++.++..++.+..   ...+...+..... ....++.+++..+.+.
T Consensus       237 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~  281 (356)
T d1rkxa_         237 PLSGYLLLAQKLYTDGAEYAEGWNFGPND-ADATPVKNIVEQMVKY  281 (356)
T ss_dssp             HHHHHHHHHHHHHHTCGGGCSEEECCCCG-GGCEEHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccccccccccc-ccccccchhhhhhHHH
Confidence            9999888776431   1123333333221 1145666777776654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.75  E-value=4.3e-18  Score=160.29  Aligned_cols=207  Identities=13%  Similarity=0.098  Sum_probs=136.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--C
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--N   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--g   81 (427)
                      .|||||||||||||++|+++|+++||+|++++|+.                            +|+.|.+++.++++  +
T Consensus         1 ~MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------~D~~d~~~~~~~l~~~~   52 (281)
T d1vl0a_           1 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEKK   52 (281)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------ccCCCHHHHHHHHHHcC
Confidence            47899999999999999999999999999998862                            37889999999987  5


Q ss_pred             cCEEEEccCCCCCCC-------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCCc-cchhhhhcccc
Q 044905           82 AGKVVVTIGPTEDGP-------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGISS-FFNNLFSRNQP  153 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~-~~~~~~~k~~~  153 (427)
                      .|+|||+++......       ....|.....++++.+...+. ++++.||+.+++........+... .....|++.+ 
T Consensus        53 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k-  130 (281)
T d1vl0a_          53 PNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTK-  130 (281)
T ss_dssp             CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHH-
T ss_pred             CCEEEeeccccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhhhhhh-
Confidence            699999998764311       234455566677777776654 667778777765544332222211 1223333332 


Q ss_pred             ccHHHHHHHHhcCCCeEEEEeCC-CCCCCCCC---------CccceEEecccccCCCCCcccHHHHHHHHHHHhcCcccc
Q 044905          154 LTVPEFLQKVIETDVSYTFIKTS-LTEDFSPE---------SSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVA  223 (427)
Q Consensus       154 l~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~---------~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~~~~  223 (427)
                      ...|   ..+.+.+++++++||+ +++.....         ....+...+  .  .-.++++++|+++++..++++.   
T Consensus       131 ~~~e---~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~i~v~D~~~~~~~~~~~~---  200 (281)
T d1vl0a_         131 LEGE---NFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--D--QVGTPTSTVDLARVVLKVIDEK---  200 (281)
T ss_dssp             HHHH---HHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--S--CEECCEEHHHHHHHHHHHHHHT---
T ss_pred             hHHH---HHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeecC--C--ceeccchhhhhhhhhhhhhhhc---
Confidence            2233   3334578999999997 33321110         001112221  1  1126899999999999999753   


Q ss_pred             cCcEEEEecCCCCChhhHHHHHHHHHhccc
Q 044905          224 ENKVVKVFTDPSAPARRVDELFSAIAEDGR  253 (427)
Q Consensus       224 ~g~~~nI~~~~~~~~~s~~ell~~i~~~~~  253 (427)
                      ..++||+++++   ..++.|++..+.+..+
T Consensus       201 ~~g~~~~~~~~---~~s~~e~~~~i~~~~g  227 (281)
T d1vl0a_         201 NYGTFHCTCKG---ICSWYDFAVEIFRLTG  227 (281)
T ss_dssp             CCEEEECCCBS---CEEHHHHHHHHHHHHC
T ss_pred             ccCceeEeCCC---ccchHHHHHHHHHHhC
Confidence            35699999998   5666777777665444

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.69  E-value=2.7e-17  Score=155.46  Aligned_cols=209  Identities=13%  Similarity=0.110  Sum_probs=129.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC--c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN--A   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g--~   82 (427)
                      |+|||||||||+|++|++.|+++|+.|.+..|+.                         ...+|++|.+.+.+++++  +
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~-------------------------~~~~Dl~~~~~~~~~i~~~~~   55 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSK-------------------------EFCGDFSNPKGVAETVRKLRP   55 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEEEECTTCS-------------------------SSCCCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEECCCc-------------------------cccCcCCCHHHHHHHHHHcCC
Confidence            6899999999999999999999997555433332                         234799999999999975  5


Q ss_pred             CEEEEccCCCCC-----CC--CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCC-CCCCccchhhhhccccc
Q 044905           83 GKVVVTIGPTED-----GP--TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVL-DGISSFFNNLFSRNQPL  154 (427)
Q Consensus        83 d~Vi~~ag~~~~-----~~--~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~-~~~~~~~~~~~~k~~~l  154 (427)
                      |+|||+||....     .+  ....|..++.+++++|+..++ +++++||+.++......+. +..+..+.+.|+..+ .
T Consensus        56 D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k-~  133 (298)
T d1n2sa_          56 DVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTK-L  133 (298)
T ss_dssp             SEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHH-H
T ss_pred             CEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchHhhhh-h
Confidence            999999986542     11  456778899999999998886 5777788877655443322 222222334555544 3


Q ss_pred             cHHHHHHHHhcCCCeEEEEeCC-CCCCCCCCCc----------cceEEecccccCCCCCcccHHHHHHHHHHHhcCc--c
Q 044905          155 TVPEFLQKVIETDVSYTFIKTS-LTEDFSPESS----------YNVVVSAEASVDANDYKVAKSQIASLVADVFSNT--A  221 (427)
Q Consensus       155 ~~E~~l~~l~~~gl~~tilRPG-~~~~~~~~~~----------~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~--~  221 (427)
                      .+|.++..   ....+.++|++ .+........          ..+...+  ...  ..++++.|+++++..++...  .
T Consensus       134 ~~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~d~~~~~~~~i~~~~~~  206 (298)
T d1n2sa_         134 AGEKALQD---NCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQY--GAPTGAELLADCTAHAIRVALNK  206 (298)
T ss_dssp             HHHHHHHH---HCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCE--ECCEEHHHHHHHHHHHHHHHHHC
T ss_pred             hhhhhHHh---hhcccccccccceeeccCCccchhhhhhhcccceeeccc--cee--ecccccchHHHHHHHHHhhhhcc
Confidence            45555443   33344555543 1111111000          0111111  111  25789999999988776421  1


Q ss_pred             cccCcEEEEecCCCCChhhHHHHHHH
Q 044905          222 VAENKVVKVFTDPSAPARRVDELFSA  247 (427)
Q Consensus       222 ~~~g~~~nI~~~~~~~~~s~~ell~~  247 (427)
                      ...+.+||+++++..+...+.+++..
T Consensus       207 ~~~~~~~n~~~~~~~~~~~~~~~i~~  232 (298)
T d1n2sa_         207 PEVAGLYHLVAGGTTTWHDYAALVFD  232 (298)
T ss_dssp             GGGCEEEECCCBSCEEHHHHHHHHHH
T ss_pred             ccccccccccCCCceecHHHHHHHHh
Confidence            23578999999884444444444433

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=6.7e-17  Score=153.10  Aligned_cols=218  Identities=10%  Similarity=0.078  Sum_probs=131.2

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc--hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH-HH----
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG--AAQELARLAASYKILSKEELKRLNAVESNFDSAESI-AK----   77 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~--~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl-~~----   77 (427)
                      .|||||||||||++|++.|+++|+ +|+++++-..  +...+..                 ....|+.+.+.+ ..    
T Consensus         1 ~ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~   63 (307)
T d1eq2a_           1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-----------------LNIADYMDKEDFLIQIMAG   63 (307)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-----------------SCCSEEEEHHHHHHHHHTT
T ss_pred             CEEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc-----------------cchhhhccchHHHHHHhhh
Confidence            389999999999999999999995 6888753222  2222211                 122233332222 22    


Q ss_pred             -HhcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCC-CCccchhhhhc
Q 044905           78 -AIGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDG-ISSFFNNLFSR  150 (427)
Q Consensus        78 -al~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~-~~~~~~~~~~k  150 (427)
                       .+..++.|+|+++......     ....++.++.+++++++..+++ +++.||+.++.+......+. ......+.|+.
T Consensus        64 ~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~  142 (307)
T d1eq2a_          64 EEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGY  142 (307)
T ss_dssp             CCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHH
T ss_pred             hcccchhhhhhhccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence             2346889999887544321     4466778999999999999996 55566666555443322211 11222344555


Q ss_pred             cccccHHHHHHHHh-cCCCeEEEEeCC-CCCCCCCC--Ccc---------------ceEEecccccCCCCCcccHHHHHH
Q 044905          151 NQPLTVPEFLQKVI-ETDVSYTFIKTS-LTEDFSPE--SSY---------------NVVVSAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       151 ~~~l~~E~~l~~l~-~~gl~~tilRPG-~~~~~~~~--~~~---------------~i~~~~~~~~~~~~~~i~v~DVA~  211 (427)
                      .+ +..|.++..+. +.+++++++||+ +++.....  ...               .....+...  ....++|++|++.
T Consensus       143 ~K-~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~r~~~~v~d~~~  219 (307)
T d1eq2a_         143 SK-FLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSEN--FKRDFVYVGDVAD  219 (307)
T ss_dssp             HH-HHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC---------------CBCEEEHHHHHH
T ss_pred             cc-chhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccc--eeeeeeecccHHH
Confidence            44 55787777766 678999999985 33322110  000               011111111  1226899999999


Q ss_pred             HHHHHhcCcccccCcEEEEecCCCCChhhHHHHHHHHHh
Q 044905          212 LVADVFSNTAVAENKVVKVFTDPSAPARRVDELFSAIAE  250 (427)
Q Consensus       212 ~v~~al~~~~~~~g~~~nI~~~~~~~~~s~~ell~~i~~  250 (427)
                      ++..++.+.   .+..|+++++.   ..++.+++..+..
T Consensus       220 ~~~~~~~~~---~~~~~~~~~~~---~~si~~i~~~i~~  252 (307)
T d1eq2a_         220 VNLWFLENG---VSGIFNLGTGR---AESFQAVADATLA  252 (307)
T ss_dssp             HHHHHHHHC---CCEEEEESCSC---CBCHHHHHHHC--
T ss_pred             HHHHHhhhc---ccccccccccc---chhHHHHHHHHHH
Confidence            999888743   46899999998   5556666666543

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.66  E-value=2.3e-15  Score=140.82  Aligned_cols=208  Identities=14%  Similarity=0.115  Sum_probs=140.5

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |...++++||||++.||+++++.|+++|++|++..|+.++++.+....          ..+...+.+|++|++++.++++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~   72 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL----------ADAARYVHLDVTQPAQWKAAVD   72 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------GGGEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------hCcceEEEeecCCHHHHHHHHH
Confidence            456789999999999999999999999999999999988766554322          1234588999999988877663


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             +.|++||++|....++           .+++|+.++..+++++    .+.+-.+||++||.....+     ..
T Consensus        73 ~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----~~  147 (244)
T d1nffa_          73 TAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAG-----TV  147 (244)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CT
T ss_pred             HHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccc-----cc
Confidence                   6899999999766533           5667777877777655    4456678999998763211     11


Q ss_pred             CCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ....|..     .| .+.+.+.+    .+...|+++..|-||+++.....+.....   ...+..  -+.+.+|||++++
T Consensus       148 ~~~~Y~a-----sK-aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~pl~--R~~~p~diA~~v~  216 (244)
T d1nffa_         148 ACHGYTA-----TK-FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDI---FQTALG--RAAEPVEVSNLVV  216 (244)
T ss_dssp             TBHHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTC---SCCSSS--SCBCHHHHHHHHH
T ss_pred             cccchhh-----HH-HHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHH---Hhcccc--CCCCHHHHHHHHH
Confidence            1222222     11 12333333    34467999999999976543221111100   011111  2678999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|.++.+-++.
T Consensus       217 fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         217 YLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             HHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhChhhCCCcCCEEEECCCe
Confidence            99874333 367888887774

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=3.8e-15  Score=139.09  Aligned_cols=208  Identities=16%  Similarity=0.116  Sum_probs=136.4

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+.++++||||++.||+.+++.|+++|++|++..|+.++++++...            -+...+.+|++|++++.++++
T Consensus         2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~   69 (242)
T d1ulsa_           2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA------------VGAHPVVMDVADPASVERGFA   69 (242)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------------TTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------------cCCeEEEEecCCHHHHHHHHH
Confidence            45678999999999999999999999999999999998776655331            123578999999998887663


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                             +.|++||++|.....+           .+++|+.++..+.+++..    .+-.+++++||++.. +     ..
T Consensus        70 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~-~-----~~  143 (242)
T d1ulsa_          70 EALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL-G-----NL  143 (242)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG-C-----CT
T ss_pred             HHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc-C-----CC
Confidence                   5899999999776543           567788888888777654    344556655554321 1     11


Q ss_pred             CCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~  212 (427)
                      +...|..     +| -+.+.+.+    .+...|+++..|.||++..........-....  ...+..  -+...+|||.+
T Consensus       144 ~~~~Y~a-----sK-aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~--R~~~pedia~~  215 (242)
T d1ulsa_         144 GQANYAA-----SM-AGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLG--RAGKPLEVAYA  215 (242)
T ss_dssp             TCHHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTC--SCBCHHHHHHH
T ss_pred             CCcchHH-----HH-HHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCC--CCCCHHHHHHH
Confidence            1222222     21 12333333    33467899999999976543221111000000  011111  25689999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.++++... ..|.++.+-++.
T Consensus       216 v~fL~S~~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         216 ALFLLSDESSFITGQVLFVDGGR  238 (242)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHhchhhCCCCCcEEEECCCc
Confidence            9999874333 368888887774

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=1.8e-15  Score=141.50  Aligned_cols=209  Identities=18%  Similarity=0.157  Sum_probs=139.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||++.||+++++.|+++|++|++..|+.+.++++....          ..+...+.+|++|.+++.++++  
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   72 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL----------GANGKGLMLNVTDPASIESVLEKI   72 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh----------CCCCcEEEEEecCHHHhhhhhhhh
Confidence            4578999999999999999999999999999999988776664321          1234578999999888877664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           +.|++||++|.....+           .+++|+.++..+++++    ++.+-.+||++||.....+.     ...
T Consensus        73 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~-----~~~  147 (243)
T d1q7ba_          73 RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN-----GGQ  147 (243)
T ss_dssp             HHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----TTC
T ss_pred             hcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC-----CCC
Confidence                 6899999999776544           5567777877777766    44566789999887632111     112


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ..|.     -+| .+.+.+.+    .+...|+++..|.||++..........-....  ...+..  -+...+|||++++
T Consensus       148 ~~Y~-----asK-aal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~--R~~~pedvA~~v~  219 (243)
T d1q7ba_         148 ANYA-----AAK-AGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAG--RLGGAQEIANAVA  219 (243)
T ss_dssp             HHHH-----HHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTS--SCBCHHHHHHHHH
T ss_pred             HHHH-----HHH-HHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCC--CCCCHHHHHHHHH
Confidence            2222     221 12333333    34467999999999976542110000000000  111111  2668999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|.++.+.++.
T Consensus       220 fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         220 FLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCchhcCCcCCeEEECCCe
Confidence            99874333 368888887773

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.62  E-value=3.6e-15  Score=140.00  Aligned_cols=211  Identities=14%  Similarity=0.121  Sum_probs=137.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.+.++||||++.||+++++.|+++|++|++..|+.+.++.+.......       ..++..+.+|++|++++.++++  
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~-------g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF-------GYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEccCCCHHHHHHHHHHH
Confidence            5678999999999999999999999999999999987766554432211       2355689999999998887764  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           +.|++||++|.....+           .+++|+.++..+++++    ++.+-.+||++||.....+.     ...
T Consensus        82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~-----~~~  156 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN-----VGQ  156 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----TTC
T ss_pred             HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC-----CCC
Confidence                 6899999999765533           4556666776666654    45667799999887632111     112


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc-eEEe-cccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN-VVVS-AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~-i~~~-~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ..|..     +| -+.+.+.+    .+...|+++..|.||++.......... .... ....+..  -+...+|||++++
T Consensus       157 ~~Y~a-----sK-aal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~--R~~~pedvA~~v~  228 (251)
T d2c07a1         157 ANYSS-----SK-AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAG--RMGTPEEVANLAC  228 (251)
T ss_dssp             HHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTS--SCBCHHHHHHHHH
T ss_pred             HHHHH-----HH-HHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            22222     21 12333333    334679999999999765432211100 0000 0111111  2668999999999


Q ss_pred             HHhcCccc-ccCcEEEEecC
Q 044905          215 DVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~  233 (427)
                      .++++... ..|.++.+-++
T Consensus       229 fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         229 FLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhCCCcCcEEEECCC
Confidence            99874433 36788888776

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.62  E-value=1.3e-14  Score=137.34  Aligned_cols=214  Identities=14%  Similarity=0.174  Sum_probs=139.9

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+.++++||||++.||+.+++.|+++|++|+++.|+.++++++......        ..++.++.+|++|++++.++++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~--------~~~~~~~~~Dv~~~~~v~~~~~   74 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--------PDVISFVHCDVTKDEDVRNLVD   74 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------TTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--------CCceEEEEccCCCHHHHHHHHH
Confidence            56788999999999999999999999999999999998776655443211        2345678999999998888764


Q ss_pred             -------CcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                             .+|++||++|.....+             .+++|+.++..+.+++.    +.+-.++|++||.+.....    
T Consensus        75 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~----  150 (268)
T d2bgka1          75 TTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAG----  150 (268)
T ss_dssp             HHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCC----
T ss_pred             HHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccc----
Confidence                   6899999999654321             45677777777776653    3566688888876521111    


Q ss_pred             CCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEec-------ccccCCCCCccc
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSA-------EASVDANDYKVA  205 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~-------~~~~~~~~~~i~  205 (427)
                       .+...    .|+-+| .+.+.+.+    .+...|+++..|.||++...............       ...+..  -+..
T Consensus       151 -~~~~~----~Y~asK-aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~g--r~~~  222 (268)
T d2bgka1         151 -EGVSH----VYTATK-HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG--TLLR  222 (268)
T ss_dssp             -TTSCH----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCS--CCCC
T ss_pred             -ccccc----ccchhH-HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCC--CCcC
Confidence             11111    222111 12333333    33467999999999966542211111100000       001111  2678


Q ss_pred             HHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .+|||++++.++++... ..|.++.+-++-
T Consensus       223 pedvA~~v~fL~S~~s~~itGq~i~VDGG~  252 (268)
T d2bgka1         223 AEDVADAVAYLAGDESKYVSGLNLVIDGGY  252 (268)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhChhhCCccCceEEECcCc
Confidence            99999999999874333 368889998874

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.62  E-value=1.9e-14  Score=134.57  Aligned_cols=211  Identities=14%  Similarity=0.132  Sum_probs=134.8

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |.+.++++||||++.||+.+++.|+++|++|++..|+.... ......          ...++..+.+|++|.+++.+++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----------~g~~~~~~~~Dvs~~~~v~~~~   71 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN----------LGRRVLTVKCDVSQPGDVEAFG   71 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH----------TTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHH----------cCCcEEEEEeeCCCHHHHHHHH
Confidence            67789999999999999999999999999999999987532 211111          1235568999999998888765


Q ss_pred             -------cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           80 -------GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        80 -------~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             .++|++||++|.....+           .+++|+.++..+.+++    ++.+-.++|++||.....+     .
T Consensus        72 ~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----~  146 (247)
T d2ew8a1          72 KQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLK-----I  146 (247)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSC-----C
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhccc-----C
Confidence                   36899999999876543           5567777777776655    4566678999987763111     1


Q ss_pred             CCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCC-ccceEE---ecccccCCCCCcccHHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPES-SYNVVV---SAEASVDANDYKVAKSQI  209 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~-~~~i~~---~~~~~~~~~~~~i~v~DV  209 (427)
                      .....|..     +| -+...+.    ..+...|+++..|.||++....... ...-..   .....+..  -+...+||
T Consensus       147 ~~~~~Y~a-----sK-aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~--r~~~pedv  218 (247)
T d2ew8a1         147 EAYTHYIS-----TK-AANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIP--RLQVPLDL  218 (247)
T ss_dssp             SSCHHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSC--SCCCTHHH
T ss_pred             cccccchh-----hh-ccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCC--CCCCHHHH
Confidence            11222222     21 1122333    3344678999999999665321110 000000   00001111  25578999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |++++.++++... ..|.++.+-++.
T Consensus       219 A~~v~fL~S~~s~~itG~~i~vDGG~  244 (247)
T d2ew8a1         219 TGAAAFLASDDASFITGQTLAVDGGM  244 (247)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             HHHHHHHhCchhcCCcCCeEEECCCE
Confidence            9999999874333 368888887774

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.60  E-value=9.8e-15  Score=136.94  Aligned_cols=212  Identities=13%  Similarity=0.094  Sum_probs=137.5

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+.++++||||++.||+++++.|+++|++|++..|+.+.++.+......        ..++.++.+|++|.+++.++++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~   74 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------PDQIQFFQHDSSDEDGWTKLFD   74 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------TTTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--------CCcEEEEEccCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999998766555432211        2356789999999988877654


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCC-eEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVG-HVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk-~~V~vSSs~v~~~~~~~~~  137 (427)
                             ++|++||++|.....+           .+++|+.++..+++++..    .+.. ++|++||.....+     .
T Consensus        75 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~-----~  149 (251)
T d1zk4a1          75 ATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVG-----D  149 (251)
T ss_dssp             HHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSC-----C
T ss_pred             HHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceecc-----C
Confidence                   6899999999876543           556777788888776643    4544 7888887652111     1


Q ss_pred             CCCCccchhhhhccccccHHHHHH------HHhcCCCeEEEEeCCCCCCCCCCCccc---eEEecccccCCCCCcccHHH
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQ------KVIETDVSYTFIKTSLTEDFSPESSYN---VVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~------~l~~~gl~~tilRPG~~~~~~~~~~~~---i~~~~~~~~~~~~~~i~v~D  208 (427)
                      .....|.....      +...+.+      .+...|+++..|.||++..........   ........+..  -+...+|
T Consensus       150 ~~~~~Y~asKa------al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~--R~~~ped  221 (251)
T d1zk4a1         150 PSLGAYNASKG------AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMG--HIGEPND  221 (251)
T ss_dssp             TTCHHHHHHHH------HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTS--SCBCHHH
T ss_pred             CCchhHHHHHH------HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCC--CCcCHHH
Confidence            11222222111      1222222      134678999999999765311100000   00000011111  2568999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ||.+++.++++... ..|..+.+-++
T Consensus       222 vA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         222 IAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCchhCCCcCcEEEECcc
Confidence            99999998874333 36788888776

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.60  E-value=1.6e-14  Score=135.70  Aligned_cols=212  Identities=14%  Similarity=0.076  Sum_probs=138.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||++.||+++++.|+++|++|++..|+.+++..+....          ..++.++.+|++|.+++.++++  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~   73 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------GDAARYQHLDVTIEEDWQRVVAYA   73 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------CCceEEEEcccCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999987665543321          2345689999999988887663  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           .+|++||++|.....+           .+++|+.++..+++++    ++.+-.+||++||......     ....
T Consensus        74 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~-----~~~~  148 (254)
T d1hdca_          74 REEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMG-----LALT  148 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTTC
T ss_pred             HHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhccc-----ccch
Confidence                 6899999999876543           5567777777777665    4456779999998763111     1122


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCc--ccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYK--VAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~--i~v~DVA~~v~  214 (427)
                      ..|.     -+| .+.+.+.+    .+...|+++..|.||++.......... ..........++..  +..+|||.+++
T Consensus       149 ~~Y~-----asK-aal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~pl~R~g~~PedvA~~v~  221 (254)
T d1hdca_         149 SSYG-----ASK-WGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI-RQGEGNYPNTPMGRVGNEPGEIAGAVV  221 (254)
T ss_dssp             HHHH-----HHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC-CCSTTSCTTSTTSSCB-CHHHHHHHHH
T ss_pred             hhHH-----HHH-HHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCH-HHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            2222     221 12333333    334678999999999765321100000 00000001111222  35799999999


Q ss_pred             HHhcCccc-ccCcEEEEecCCCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDPSA  236 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~~~  236 (427)
                      .++++... ..|.++.+-++...
T Consensus       222 fL~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         222 KLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHhchhhCCCCCceEEeCCCccC
Confidence            99874333 36889999887543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.60  E-value=1.4e-14  Score=135.68  Aligned_cols=207  Identities=12%  Similarity=0.067  Sum_probs=135.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      -+.++++||||++.||+++++.|+++|++|.+..|+.+..+.....+.             .++.+|++|.+++.++++ 
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~-------------~~~~~Dv~~~~~v~~~~~~   69 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG-------------AFFQVDLEDERERVRFVEE   69 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTC-------------EEEECCTTCHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC-------------eEEEEeCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999999875443332222             378999999888777664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ++|++||+||....++           .+++|+.++.++.+++.    +.+-.+||++||.....+.     ..
T Consensus        70 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~-----~~  144 (248)
T d2d1ya1          70 AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----QE  144 (248)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----TT
T ss_pred             HHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-----cc
Confidence                  6899999999765533           55678778887777664    4556789999877632111     11


Q ss_pred             CCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc------eEEec--ccccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN------VVVSA--EASVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~------i~~~~--~~~~~~~~~~i~v~  207 (427)
                      ...|.     -.+ .+.+.+.+    .+...|+++..|.||+++.........      -....  ...+..  -+...+
T Consensus       145 ~~~Y~-----asK-aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~~~pe  216 (248)
T d2d1ya1         145 NAAYN-----ASK-GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR--RLGKPE  216 (248)
T ss_dssp             BHHHH-----HHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTS--SCBCHH
T ss_pred             cchhH-----HHH-HHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCC--CCcCHH
Confidence            12222     221 12333333    344679999999999765311000000      00000  011111  256899


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||++++.++++... ..|..+.+-++-
T Consensus       217 dia~~v~fL~S~~s~~itG~~i~vDGG~  244 (248)
T d2d1ya1         217 EVAEAVLFLASEKASFITGAILPVDGGM  244 (248)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence            999999999874333 367888887773

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.59  E-value=3.4e-14  Score=133.73  Aligned_cols=212  Identities=15%  Similarity=0.117  Sum_probs=134.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.++++||||++.||+++++.|+++|++|++..|+.. .++.+......      ....++.++.+|++|.+++.++++ 
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~------~~g~~~~~~~~Dv~~~~~v~~~~~~   76 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA------QHGVKVLYDGADLSKGEAVRGLVDN   76 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH------HHTSCEEEECCCTTSHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHH------hcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4678999999999999999999999999999999754 33433321111      112345678999999998887764 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            +.|++||+||.....+           .+++|+.++.++++++    ++.+-.++|++||.+...+     ...
T Consensus        77 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~-----~~~  151 (260)
T d1x1ta1          77 AVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA-----SAN  151 (260)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----CTT
T ss_pred             HHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec-----cCC
Confidence                  5899999999776543           5567766776665554    5556679999988763111     111


Q ss_pred             CCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCc-cceEE-ec------------ccccCCCC
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESS-YNVVV-SA------------EASVDAND  201 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~-~~i~~-~~------------~~~~~~~~  201 (427)
                      ...|.     -++ .+...+.+.    +...|+++..|.||++........ ..... .+            ...+..  
T Consensus       152 ~~~Y~-----asK-aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~--  223 (260)
T d1x1ta1         152 KSAYV-----AAK-HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL--  223 (260)
T ss_dssp             CHHHH-----HHH-HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC--
T ss_pred             cchhh-----hhh-hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCC--
Confidence            12222     221 123333333    346789999999996653221100 00000 00            001111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      -+...+|||++++.++++... ..|.++.+-++
T Consensus       224 R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         224 QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            256899999999999874333 36788888777

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.58  E-value=2.5e-14  Score=134.45  Aligned_cols=211  Identities=18%  Similarity=0.198  Sum_probs=138.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      |.|.+|||||++.||+++++.|+++|++|++..|+.+.++++.......       ..++..+.+|++|++++.++++  
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~-------g~~~~~~~~Dvs~~~~v~~~~~~~   73 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA-------GVEADGRTCDVRSVPEIEALVAAV   73 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-------TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------CCcEEEEEeecCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999987765554322111       2355689999999998887764  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH------cCCCeEEEEecccccccccCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL------AGVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~------~gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                           +.|++|||||.....+           .+++|+.++..+++++..      .+..++|.+||.....+     ..
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~-----~~  148 (257)
T d2rhca1          74 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG-----VV  148 (257)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSC-----CT
T ss_pred             HHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccc-----cc
Confidence                 5899999999766543           567888899999887753      35567888877652111     11


Q ss_pred             CCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCc-------cceEEe------cccccCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESS-------YNVVVS------AEASVDAND  201 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~-------~~i~~~------~~~~~~~~~  201 (427)
                      ....|.     -+| -+...+.+.    +...|+++..|.||++........       ......      ....+..  
T Consensus       149 ~~~~Y~-----asK-aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg--  220 (257)
T d2rhca1         149 HAAPYS-----ASK-HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG--  220 (257)
T ss_dssp             TCHHHH-----HHH-HHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS--
T ss_pred             cchhHH-----HHH-HHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC--
Confidence            112222     221 123333333    335689999999997753211000       000000      0011111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      -+...+|||++++.++++... ..|..+.+-++
T Consensus       221 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         221 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            267899999999999874333 36788888776

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.58  E-value=5e-14  Score=132.57  Aligned_cols=216  Identities=13%  Similarity=0.092  Sum_probs=139.8

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-   79 (427)
                      |.+.++++||||++.||+.+++.|+++|++|.+..|+.++++.+......     .....++..+.+|++|++++.+++ 
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~-----~~~~~~~~~~~~Dvt~~~~v~~~~~   75 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-----TAPDAEVLTTVADVSDEAQVEAYVT   75 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----HCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----hCCCCeEEEEeccCCCHHHHHHHHH
Confidence            56778999999999999999999999999999999998776554332111     011235567899999999888766 


Q ss_pred             ------cCcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           80 ------GNAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        80 ------~g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                            .++|++||++|.... ++           .+++|+.++..+.+++    +..+-.+||++||.+...+     .
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----~  150 (258)
T d1iy8a_          76 ATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRG-----I  150 (258)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSB-----C
T ss_pred             HHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccC-----C
Confidence                  368999999996532 22           5667777888777765    3456778999988762111     1


Q ss_pred             CCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCc-cce-------EEe--cccccCCCCCc
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESS-YNV-------VVS--AEASVDANDYK  203 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~-~~i-------~~~--~~~~~~~~~~~  203 (427)
                      .....|..     +| .+...+.    ..+...|+++..|.||++........ ...       ...  ....+..  -+
T Consensus       151 ~~~~~Y~a-----sK-aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~  222 (258)
T d1iy8a_         151 GNQSGYAA-----AK-HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK--RY  222 (258)
T ss_dssp             SSBHHHHH-----HH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC--SC
T ss_pred             CCchHHHH-----HH-HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC--CC
Confidence            11222222     11 1122333    33446799999999997653211000 000       000  0011111  25


Q ss_pred             ccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          204 VAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ...+|||++++.++++... ..|.++.+-++.
T Consensus       223 ~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~  254 (258)
T d1iy8a_         223 GEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  254 (258)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEcCcch
Confidence            6899999999999874333 367889888875

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.57  E-value=3.5e-14  Score=133.49  Aligned_cols=210  Identities=14%  Similarity=0.104  Sum_probs=138.0

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      -+.++++||||++.||+++++.|+++|++|++..|+.++++.+....          ..++..+.+|++|++++.++++ 
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----------~~~~~~~~~Dvt~~~~v~~~~~~   72 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----------GPAACAIALDVTDQASIDRCVAE   72 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----------CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------CCceEEEEeeCCCHHHHHHHHHH
Confidence            35678999999999999999999999999999999987766554321          1244578999999998887764 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----Hc-CCCeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LA-GVGHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~-gVk~~V~vSSs~v~~~~~~~~~~  138 (427)
                            ++|++||++|....++           .+++|+.++..+.+++.    +. .-.+||++||.+...+     ..
T Consensus        73 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~-----~~  147 (256)
T d1k2wa_          73 LLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRG-----EA  147 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CT
T ss_pred             HHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccc-----cc
Confidence                  6899999999776543           56677778877776543    22 3568999987763211     11


Q ss_pred             CCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc-------eEEe------cccccCCCC
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN-------VVVS------AEASVDAND  201 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~-------i~~~------~~~~~~~~~  201 (427)
                      ....|..     +| .+.+.+.+    .+...|+++..|.||+++.........       ....      ....+..  
T Consensus       148 ~~~~Y~a-----sK-aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--  219 (256)
T d1k2wa_         148 LVGVYCA-----TK-AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFG--  219 (256)
T ss_dssp             TCHHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTS--
T ss_pred             cccchhh-----hh-hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCC--
Confidence            1122221     11 12333333    334678999999999776532110000       0000      0001111  


Q ss_pred             CcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      -+...+|||.+++.+++.... ..|..+.+-++.
T Consensus       220 R~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~  253 (256)
T d1k2wa_         220 RMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGN  253 (256)
T ss_dssp             SCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCceEEECcch
Confidence            256899999999998874333 368888888774

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.57  E-value=3.2e-14  Score=133.41  Aligned_cols=213  Identities=16%  Similarity=0.121  Sum_probs=136.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||++.||+.+++.|+++|++|.+..|+.+++.++.....+      ....++..+.+|++|++++.++++  
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~------~~g~~~~~~~~Dv~~~~~v~~~~~~~   77 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE------KYGVETMAFRCDVSNYEEVKKLLEAV   77 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH------HhCCcEEEEEccCCCHHHHHHHHHHH
Confidence            567999999999999999999999999999999998766544322111      001245578999999888877663  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           ++|++||++|....++           .+++|+.++..+.+++.    +.+-.++|+++|+......    ....
T Consensus        78 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~----~~~~  153 (251)
T d1vl8a_          78 KEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----MPNI  153 (251)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----SSSC
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc----Cccc
Confidence                 6899999999766544           45667777777776654    3566799999876521110    0111


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc---eE-EecccccCCCCCcccHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN---VV-VSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~---i~-~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      ..|.     -+| .+.+.+.+    .+...|+++..|.||++..........   .. ......+..  -+...+|||++
T Consensus       154 ~~Y~-----asK-aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~pedvA~~  225 (251)
T d1vl8a_         154 SAYA-----ASK-GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG--RTGVPEDLKGV  225 (251)
T ss_dssp             HHHH-----HHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS--SCBCGGGGHHH
T ss_pred             cchH-----HHH-HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC--CCCCHHHHHHH
Confidence            2222     111 12333333    344679999999999765432110000   00 000011111  25688999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecC
Q 044905          213 VADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ++.++++... ..|.++.+-++
T Consensus       226 v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         226 AVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             HHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCchhCCCcCcEEEeCcC
Confidence            9998874333 36888888776

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.57  E-value=4.4e-14  Score=133.07  Aligned_cols=212  Identities=12%  Similarity=0.087  Sum_probs=128.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||++.||+.+++.|+++|++|+++.|+.++++++......       ...++..+.+|++|.+++.++++  
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-------~~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-------KGFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCceEEEeccCCCHHHHHHHHHHH
Confidence            467999999999999999999999999999999998876655432211       12356689999999888776552  


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ..|++||++|.....+           .+++|+.++..+++++    ++.+-.++|++||.....+.     ..
T Consensus        80 ~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~-----~~  154 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----SV  154 (259)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------
T ss_pred             HHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc-----cc
Confidence                  3899999999765433           5577888887777765    44567799999877631111     11


Q ss_pred             CCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc-ceEEec--ccccCCCCCcccHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY-NVVVSA--EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~-~i~~~~--~~~~~~~~~~i~v~DVA~~  212 (427)
                      ...|..     +| -+...+.    ..+...|+++..|-||+++........ .-....  ...+..  -+...+|||.+
T Consensus       155 ~~~Y~a-----sK-aal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~--R~~~pedvA~~  226 (259)
T d1xq1a_         155 GSIYSA-----TK-GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLG--RFGEPEEVSSL  226 (259)
T ss_dssp             CCHHHH-----HH-HHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHH
T ss_pred             cccccc-----cc-cchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCC--CCcCHHHHHHH
Confidence            222222     11 1123333    334467999999999976542211100 000000  001111  14578999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++.++++... ..|..+.+-++.
T Consensus       227 v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         227 VAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             HHHHTSGGGTTCCSCEEECCCCE
T ss_pred             HHHHhCchhcCCcCcEEEeCCCE
Confidence            9998874333 367788877663

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.57  E-value=6e-15  Score=137.31  Aligned_cols=200  Identities=18%  Similarity=0.188  Sum_probs=130.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++||||++.||+.+++.|+++|++|++..|+....+                  ++..+.+|++|++++.++++  
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------------------~~~~~~~Dv~~~~~v~~~~~~~   67 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------GLFGVEVDVTDSDAVDRAFTAV   67 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------TSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------------------CceEEEEecCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999876432                  22478999999988877664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHH----HHHHcCCCeEEEEecccccccccCCCCCCC
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQ----AAQLAGVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~----Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                           +.|++||++|.....+           .+++|+.++..+.+    .+++.+-.+||++||.....+.     ...
T Consensus        68 ~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----~~~  142 (237)
T d1uzma1          68 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----GNQ  142 (237)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------CC
T ss_pred             HHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC-----ccc
Confidence                 5899999999765533           55677777766655    4455677799999987632111     111


Q ss_pred             CccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      ..     |+-+| -+.+.+.+.    +...|+++..|.||+++.........-...  ....+..  -+...+|||.+++
T Consensus       143 ~~-----Y~asK-aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~--R~~~pedvA~~v~  214 (237)
T d1uzma1         143 AN-----YAASK-AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAK--RVGTPAEVAGVVS  214 (237)
T ss_dssp             HH-----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTC--SCBCHHHHHHHHH
T ss_pred             HH-----HHHHH-HHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            22     22222 123333333    446789999999997754211000000000  0111111  2678999999999


Q ss_pred             HHhcCccc-ccCcEEEEecC
Q 044905          215 DVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~  233 (427)
                      .++++... ..|.++.+.++
T Consensus       215 fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         215 FLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             HHHSGGGTTCCSCEEEESTT
T ss_pred             HHhCchhcCCcCCeEEECCC
Confidence            99874333 36888888776

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=1.9e-14  Score=135.34  Aligned_cols=212  Identities=16%  Similarity=0.116  Sum_probs=136.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +.++++||||++.||+++++.|+++|++|++..|+.++++++......       ...++..+.+|++|++++.+++   
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~-------~g~~~~~~~~Dvs~~~~~~~~~~~~   82 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-------LGGQAFACRCDITSEQELSALADFA   82 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-------cCCcEEEEEccCCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998776555432211       0234568999999998887765   


Q ss_pred             ----cCcCEEEEccCCCCCCC----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           80 ----GNAGKVVVTIGPTEDGP----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~~----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          .+.|++||++|.....+          .+++|+.++..+.+++    .+.+-.++|++||.+...+     .....
T Consensus        83 ~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~-----~~~~~  157 (255)
T d1fmca_          83 ISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----NINMT  157 (255)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----CTTCH
T ss_pred             HHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhcc-----ccccc
Confidence                36899999999765432          4567777777776655    3445567888887652111     11122


Q ss_pred             ccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCc--cceEEe-cccccCCCCCcccHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESS--YNVVVS-AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~--~~i~~~-~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      .|.     .+| -+...+.+    .+...|+++..|-||++........  ...... ....+..  -+...+|||++++
T Consensus       158 ~Y~-----asK-aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~--R~g~pedvA~~v~  229 (255)
T d1fmca_         158 SYA-----SSK-AAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIR--RLGQPQDIANAAL  229 (255)
T ss_dssp             HHH-----HHH-HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSC--SCBCHHHHHHHHH
T ss_pred             cch-----hHH-HHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            222     221 12333333    3446799999999997643110000  000000 0011111  2568999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|.++.+-++.
T Consensus       230 fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         230 FLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HHHSGGGTTCCSCEEEESTTS
T ss_pred             HHhCchhcCCcCCEEEECcCc
Confidence            99874322 368889988885

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.57  E-value=4.1e-14  Score=132.85  Aligned_cols=210  Identities=15%  Similarity=0.113  Sum_probs=135.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      +.++||||++.||+++++.|+++|++|++..|+.++++.+......       ...++..+.+|++|.+++.++++    
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~-------~g~~~~~~~~Dv~~~~~v~~~~~~~~~   74 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-------AGGHAVAVKVDVSDRDQVFAAVEQARK   74 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4569999999999999999999999999999998876655432211       12355688999999988887653    


Q ss_pred             ---CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcC-CCeEEEEecccccccccCCCCCCCC
Q 044905           81 ---NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAG-VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ---g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                         ++|++||+||.....+           .+++|+.++.++++++.    +.+ -.+++++||.+...+     .....
T Consensus        75 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~-----~~~~~  149 (255)
T d1gega_          75 TLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVG-----NPELA  149 (255)
T ss_dssp             HTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC-----CTTBH
T ss_pred             HhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhccc-----Ccccc
Confidence               6899999999765533           56678888888877653    333 456888877652111     11112


Q ss_pred             ccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCcc-------ceEEe------cccccCCCCCcc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSY-------NVVVS------AEASVDANDYKV  204 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~-------~i~~~------~~~~~~~~~~~i  204 (427)
                      .     |+-+| .+.+.+.+    .+...|+++..|.||++.........       .....      ....+..  -+.
T Consensus       150 ~-----Y~asK-aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~~  221 (255)
T d1gega_         150 V-----YSSSK-FAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG--RLS  221 (255)
T ss_dssp             H-----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTC--SCB
T ss_pred             c-----chhCH-HHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCC--CCc
Confidence            2     22211 12333333    33467999999999976532110000       00000      0011111  256


Q ss_pred             cHHHHHHHHHHHhcCcccc-cCcEEEEecCC
Q 044905          205 AKSQIASLVADVFSNTAVA-ENKVVKVFTDP  234 (427)
Q Consensus       205 ~v~DVA~~v~~al~~~~~~-~g~~~nI~~~~  234 (427)
                      ..+|||++++.++++...+ .|..+.+-++-
T Consensus       222 ~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         222 EPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence            8999999999998743333 68888887773

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2e-14  Score=135.31  Aligned_cols=203  Identities=17%  Similarity=0.170  Sum_probs=127.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .+++|||||++.||.++++.|+++|++|++..|+.++++++.......     ....++..+.+|++|++++.+++.   
T Consensus        10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~-----~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_          10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-----GYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----TCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-----CCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999999988766654432210     002356688999999988877653   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcC--CCeEEEEecccccccccCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAG--VGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~g--Vk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                          ++|++||++|....++           .+++|+.+..++.+++    +..+  -.++|++||.+-....       
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~-------  157 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL-------  157 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-------
T ss_pred             HhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC-------
Confidence                6899999999765533           4556666766665554    3444  4689999877621110       


Q ss_pred             CCccchhhhhccccccHHHHHHH----H--hcCCCeEEEEeCCCCCCCCCCCccceEE--ecccccCCCCCcccHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQK----V--IETDVSYTFIKTSLTEDFSPESSYNVVV--SAEASVDANDYKVAKSQIAS  211 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~----l--~~~gl~~tilRPG~~~~~~~~~~~~i~~--~~~~~~~~~~~~i~v~DVA~  211 (427)
                       +......|...+ .+...+.+.    +  ...++++..|-||++..........-..  .....+..  .+...+|||+
T Consensus       158 -p~~~~~~Y~~sK-aal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~--r~~~pedvA~  233 (257)
T d1xg5a_         158 -PLSVTHFYSATK-YAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQM--KCLKPEDVAE  233 (257)
T ss_dssp             -SCGGGHHHHHHH-HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC-----CBCHHHHHH
T ss_pred             -CCcccHHHHHHH-HHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCC--CCcCHHHHHH
Confidence             111111232222 123333322    2  3568999999999765421100000000  00001111  3779999999


Q ss_pred             HHHHHhcCccc
Q 044905          212 LVADVFSNTAV  222 (427)
Q Consensus       212 ~v~~al~~~~~  222 (427)
                      +++.+++++..
T Consensus       234 ~v~fL~s~~a~  244 (257)
T d1xg5a_         234 AVIYVLSTPAH  244 (257)
T ss_dssp             HHHHHHHSCTT
T ss_pred             HHHHHhCChhc
Confidence            99999876543

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.56  E-value=6.5e-14  Score=130.39  Aligned_cols=189  Identities=14%  Similarity=0.151  Sum_probs=127.0

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCe-------EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFS-------VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~-------V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      -|+||||++.||+++++.|+++|++       |+...|+.+.++.+......       ...+...+.+|++|.+++.++
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-------~g~~~~~~~~Dvt~~~~v~~~   75 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-------EGALTDTITADISDMADVRRL   75 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-------TTCEEEEEECCTTSHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-------cCCcEEEEEecCCCHHHHHHH
Confidence            4799999999999999999999987       88899998776655432211       123456789999999888776


Q ss_pred             hc-------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCC
Q 044905           79 IG-------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        79 l~-------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                      ++       +.|++||++|.....+           .+++|+.++..+++++    ++.+-.++|++||.+...+     
T Consensus        76 ~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----  150 (240)
T d2bd0a1          76 TTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKA-----  150 (240)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----
T ss_pred             HHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCC-----
Confidence            64       5899999999776543           5667777877776655    4456679999988763211     


Q ss_pred             CCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASL  212 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~  212 (427)
                      ......|.....      +...+.+    .+...|+++..|.||+++.....   .+    .....  ......+|||++
T Consensus       151 ~~~~~~Y~asK~------al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~---~~----~~~~~--~~~~~PedvA~~  215 (240)
T d2bd0a1         151 FRHSSIYCMSKF------GQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG---KV----DDEMQ--ALMMMPEDIAAP  215 (240)
T ss_dssp             CTTCHHHHHHHH------HHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC---CC----CSTTG--GGSBCHHHHHHH
T ss_pred             CCCChHHHHHHH------HHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh---hc----CHhhH--hcCCCHHHHHHH
Confidence            112222222211      1233333    34467899999999976543221   11    01111  125678999999


Q ss_pred             HHHHhcCcc
Q 044905          213 VADVFSNTA  221 (427)
Q Consensus       213 v~~al~~~~  221 (427)
                      ++.+++++.
T Consensus       216 v~~l~s~~~  224 (240)
T d2bd0a1         216 VVQAYLQPS  224 (240)
T ss_dssp             HHHHHTSCT
T ss_pred             HHHHHcCCc
Confidence            999987654

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=6.5e-14  Score=130.68  Aligned_cols=206  Identities=14%  Similarity=0.093  Sum_probs=135.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||++.||+++++.|+++|++|+++.|+.++++.+...           ..++..+.+|++|.+++.++++   
T Consensus         7 GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~~~g   75 (244)
T d1pr9a_           7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE-----------CPGIEPVCVDLGDWEATERALGSVG   75 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------STTCEEEECCTTCHHHHHHHHTTCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHh-----------cCCCeEEEEeCCCHHHHHHHHHHhC
Confidence            46999999999999999999999999999999998776665432           2344688999999999988876   


Q ss_pred             CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH-----cCCCeEEEEecccccccccCCCCCCCCccc
Q 044905           81 NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL-----AGVGHVAIIYDGNTTAASTYNVLDGISSFF  144 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~-----~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~  144 (427)
                      .+|++||++|.....+           .+++|+.++..+.+++..     .+-.++|++||......     ......  
T Consensus        76 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~-----~~~~~~--  148 (244)
T d1pr9a_          76 PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA-----VTNHSV--  148 (244)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----CTTBHH--
T ss_pred             CceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccc-----ccchhh--
Confidence            5899999999876543           456677777777665432     34568888887762111     111122  


Q ss_pred             hhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCc-cce-EEe--cccccCCCCCcccHHHHHHHHHHH
Q 044905          145 NNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESS-YNV-VVS--AEASVDANDYKVAKSQIASLVADV  216 (427)
Q Consensus       145 ~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~-~~i-~~~--~~~~~~~~~~~i~v~DVA~~v~~a  216 (427)
                         |+-+| -+.+.+.+.    +...|+++..|.||++........ ... ...  -...+..  -+...+|||++++.+
T Consensus       149 ---Y~asK-aal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~peevA~~v~fL  222 (244)
T d1pr9a_         149 ---YCSTK-GALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG--KFAEVEHVVNAILFL  222 (244)
T ss_dssp             ---HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC--SCBCHHHHHHHHHHH
T ss_pred             ---hhhhH-HHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC--CCcCHHHHHHHHHHH
Confidence               22211 123333333    346789999999997653211000 000 000  0011111  267899999999999


Q ss_pred             hcCccc-ccCcEEEEecC
Q 044905          217 FSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       217 l~~~~~-~~g~~~nI~~~  233 (427)
                      +++... ..|.++.+-++
T Consensus       223 ~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         223 LSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             HSGGGTTCCSCEEEESTT
T ss_pred             hCchhCCcCCcEEEECcc
Confidence            874333 36788888776

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=2.1e-14  Score=134.58  Aligned_cols=209  Identities=11%  Similarity=0.036  Sum_probs=136.7

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+.++++||||++.||+++++.|+++|++|++..|+.+.++.+....           .+...+.+|++|.+++.++++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----------~~~~~~~~Dvs~~~~v~~~~~   71 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------PGAVFILCDVTQEDDVKTLVS   71 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------TTEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----------CCCeEEEccCCCHHHHHHHHH
Confidence            557789999999999999999999999999999999987776665432           233578999999988887664


Q ss_pred             -------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             ++|++||++|.... .+           .+++|+.++.++++++.    +.+ .++|++||.+.....     
T Consensus        72 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~-----  145 (250)
T d1ydea1          72 ETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQ-----  145 (250)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCC-----
T ss_pred             HHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccc-----
Confidence                   68999999996532 21           45677778877777654    334 689999877632111     


Q ss_pred             CCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCC----c---cceEEe-cccccCCCCCccc
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPES----S---YNVVVS-AEASVDANDYKVA  205 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~----~---~~i~~~-~~~~~~~~~~~i~  205 (427)
                      .....|..     .+ -+...+.    ..+...|+++..|.||+++......    .   ...... ....+..  -+..
T Consensus       146 ~~~~~Y~a-----sK-aal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~g~  217 (250)
T d1ydea1         146 AQAVPYVA-----TK-GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG--RMGQ  217 (250)
T ss_dssp             TTCHHHHH-----HH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS--SCBC
T ss_pred             cCcchhHH-----HH-hhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC--CCCC
Confidence            11122222     11 1123333    3344679999999999765311000    0   000000 0011111  2678


Q ss_pred             HHHHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          206 KSQIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       206 v~DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      .+|||.+++.++++..-..|.++.+-++.
T Consensus       218 p~eva~~v~fL~Sda~~itG~~i~vDGG~  246 (250)
T d1ydea1         218 PAEVGAAAVFLASEANFCTGIELLVTGGA  246 (250)
T ss_dssp             HHHHHHHHHHHHHHCTTCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHhCccCCCcCCeEEECCCc
Confidence            99999999998864222367888887774

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.56  E-value=7.3e-14  Score=130.09  Aligned_cols=210  Identities=15%  Similarity=0.081  Sum_probs=136.9

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |-..++++|||||+.||..+++.|+++|++|++..|+.+++.++....          ..++..+.+|++|++++.++++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dls~~~~i~~~~~   71 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----------EAEAIAVVADVSDPKAVEAVFA   71 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----------CSSEEEEECCTTSHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------CCceEEEEecCCCHHHHHHHHH
Confidence            446789999999999999999999999999999999987665543321          1244578999999998877664


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcC--CCeEEEEecccccccccCCCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAG--VGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~g--Vk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                             +.|++||++|....++           .+++|+.+...+.+++...-  -+.++++||.+...          
T Consensus        72 ~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~----------  141 (241)
T d2a4ka1          72 EALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG----------  141 (241)
T ss_dssp             HHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC----------
T ss_pred             HHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc----------
Confidence                   5899999998765533           55677778888887765532  33444444433110          


Q ss_pred             CccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccceEEe--cccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYNVVVS--AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~i~~~--~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                       ......|+-.+ .+.+.+.+.+    ...|+++..|.||+++.........-...  ....+..  -+...+|||++++
T Consensus       142 -~~~~~~Y~~sK-~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~--r~~~p~dva~~v~  217 (241)
T d2a4ka1         142 -AFGLAHYAAGK-LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLG--RAGRPEEVAQAAL  217 (241)
T ss_dssp             -HHHHHHHHHCS-SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTC--SCBCHHHHHHHHH
T ss_pred             -ccCccccchhh-HHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCC--CCcCHHHHHHHHH
Confidence             01112333333 4455555554    36789999999997654211111100000  0111222  2668999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|.++.+-++.
T Consensus       218 fL~S~~s~~itG~~i~vDGG~  238 (241)
T d2a4ka1         218 FLLSEESAYITGQALYVDGGR  238 (241)
T ss_dssp             HHHSGGGTTCCSCEEEESTTT
T ss_pred             HHhcchhCCCcCceEEeCCCc
Confidence            99874333 367888887774

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.56  E-value=1.5e-13  Score=129.36  Aligned_cols=211  Identities=12%  Similarity=0.073  Sum_probs=134.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ..++++|||||+.||+++++.|+++|++|+++.|++..++++......       ...++.++.+|++|.+.+.++++  
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~-------~~~~~~~~~~D~s~~~~~~~~~~~~   77 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-------KGLNVEGSVCDLLSRTERDKLMQTV   77 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCCceEEEeecCCHHHHHHHHHHH
Confidence            367899999999999999999999999999999998776655433221       12345578899999988776653  


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            ..|++||++|.....+           .+++|+.++..+.+++    ...+..++|++||.....+     ...
T Consensus        78 ~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~-----~~~  152 (258)
T d1ae1a_          78 AHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA-----LPS  152 (258)
T ss_dssp             HHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC-----CTT
T ss_pred             HHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc-----ccc
Confidence                  3799999999776543           4566666776666654    4456779999987763111     111


Q ss_pred             CCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc-eEEec-------ccccCCCCCcccHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN-VVVSA-------EASVDANDYKVAKS  207 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~-i~~~~-------~~~~~~~~~~i~v~  207 (427)
                      ...     |+-.+ -+.+.+.    ..+...|+++-.|.||+++......... .....       ...+..  -+.+.+
T Consensus       153 ~~~-----Y~~sK-~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg--R~~~pe  224 (258)
T d1ae1a_         153 VSL-----YSASK-GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG--RAGKPQ  224 (258)
T ss_dssp             CHH-----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC--SCBCHH
T ss_pred             chh-----HHHHH-HHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC--CCcCHH
Confidence            122     21111 1233333    3344678999999999765421111000 00000       001111  267999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      |||.+++.++++... ..|..+.+-++
T Consensus       225 diA~~v~fL~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         225 EVSALIAFLCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence            999999999974333 36778888776

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=2.6e-14  Score=133.32  Aligned_cols=207  Identities=13%  Similarity=0.076  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||++.||+.+++.|+++|++|+++.|+.+++.++...           ..++..+.+|++|.+++.++++  
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~   72 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE-----------CPGIEPVCVDLGDWDATEKALGGI   72 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----------STTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-----------cCCCeEEEEeCCCHHHHHHHHHHc
Confidence            357899999999999999999999999999999998776665443           2345688999999999998886  


Q ss_pred             -CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----c-CCCeEEEEecccccccccCCCCCCCCcc
Q 044905           81 -NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----A-GVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~-gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                       +.|++||++|.....+           .+++|+.++..+.+++..    . +-.++|++||......     ...... 
T Consensus        73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~-----~~~~~~-  146 (242)
T d1cyda_          73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVT-----FPNLIT-  146 (242)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----CTTBHH-
T ss_pred             CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhcccc-----CCcccc-
Confidence             5799999999766543           456777788777775532    2 3457888887652111     111122 


Q ss_pred             chhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCcc---ceEE-ecccccCCCCCcccHHHHHHHHHH
Q 044905          144 FNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSY---NVVV-SAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~---~i~~-~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                          |+-.| .+...+.+.    +...|+++..|-||++.........   .... .....+..  -+...+|||++++.
T Consensus       147 ----Y~asK-aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~peeva~~v~f  219 (242)
T d1cyda_         147 ----YSSTK-GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLR--KFAEVEDVVNSILF  219 (242)
T ss_dssp             ----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTS--SCBCHHHHHHHHHH
T ss_pred             ----ccchH-HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCC--CCcCHHHHHHHHHH
Confidence                22221 123333333    3467899999999977542110000   0000 00011112  26789999999999


Q ss_pred             HhcCccc-ccCcEEEEecC
Q 044905          216 VFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       216 al~~~~~-~~g~~~nI~~~  233 (427)
                      ++++... ..|.++.+-++
T Consensus       220 L~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         220 LLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             HHSGGGTTCCSSEEEESTT
T ss_pred             HhCchhcCcCCceEEeCcc
Confidence            8874333 36788888776

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.54  E-value=6e-14  Score=132.10  Aligned_cols=211  Identities=12%  Similarity=0.066  Sum_probs=136.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +.++++||||++.||+++++.|+++|++|++..|+.++++++......       ...+...+.+|++|.+++.+++   
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-------~g~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-------KGFKVEASVCDLSSRSERQELMNTV   79 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCCceEEEeeCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999998876655433211       1234567899999988877665   


Q ss_pred             ----c-CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCC
Q 044905           80 ----G-NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        80 ----~-g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                          . ..|++||++|.....+           .+++|+.++..+.+++    ++.+-.++|++||......     ...
T Consensus        80 ~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~-----~~~  154 (259)
T d2ae2a_          80 ANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-----VPY  154 (259)
T ss_dssp             HHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-----CTT
T ss_pred             HHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc-----ccc
Confidence                2 3899999999766543           5567777777776655    4456678999988762111     111


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-------eEEecccccCCCCCcccHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-------VVVSAEASVDANDYKVAKSQ  208 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-------i~~~~~~~~~~~~~~i~v~D  208 (427)
                      ...|.     -+| -+...+.+.+    ...|+++..|.||++..........       +.......+..  -+...+|
T Consensus       155 ~~~Y~-----asK-aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~--R~g~ped  226 (259)
T d2ae2a_         155 EAVYG-----ATK-GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR--RMGEPKE  226 (259)
T ss_dssp             CHHHH-----HHH-HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC--SCBCHHH
T ss_pred             ccchH-----HHH-HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC--CCcCHHH
Confidence            12222     111 1233333333    3678999999999765321100000       00000011111  2568999


Q ss_pred             HHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          209 IASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      ||++++.++++...+ .|..+.+-++
T Consensus       227 vA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         227 LAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCchhCCCcCcEEEECCC
Confidence            999999988743333 6788888776

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.54  E-value=4.4e-14  Score=133.04  Aligned_cols=213  Identities=12%  Similarity=0.087  Sum_probs=136.4

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+.++++||||++.||+++++.|+++|++|+++.|+.+.++.+......       ...++..+.+|++|.+++.++++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-------~g~~~~~~~~Dv~~~~~v~~~~~   74 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-------KGVEARSYVCDVTSEEAVIGTVD   74 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-------TTSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHH
Confidence            45678999999999999999999999999999999998776655433221       12355689999999888877664


Q ss_pred             -------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCC
Q 044905           81 -------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVL  137 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~  137 (427)
                             +.|++||++|.... ++           .+++|+.++..+++++    .+.+-.++|++||.+...+     .
T Consensus        75 ~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~-----~  149 (260)
T d1zema1          75 SVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG-----P  149 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSC-----C
T ss_pred             HHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccC-----C
Confidence                   68999999996543 22           5567777777777665    3456679999987762211     1


Q ss_pred             CCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCC-------------C---ccceEEec--cc
Q 044905          138 DGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPE-------------S---SYNVVVSA--EA  195 (427)
Q Consensus       138 ~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~-------------~---~~~i~~~~--~~  195 (427)
                      .....|....      .+.+.+.+    .+...|+++..|.||++......             .   ........  ..
T Consensus       150 ~~~~~Y~asK------aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (260)
T d1zema1         150 PNMAAYGTSK------GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS  223 (260)
T ss_dssp             TTBHHHHHHH------HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred             cchHHHHHHH------HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhc
Confidence            1122222211      12333333    33467899999999976542100             0   00000000  00


Q ss_pred             ccCCCCCcccHHHHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          196 SVDANDYKVAKSQIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       196 ~~~~~~~~i~v~DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      .+..  -+...+|||.+++.++++...+ .|.++.+-++
T Consensus       224 ~Pl~--R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         224 VPMR--RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             STTS--SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCCC--CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            1111  2567899999999998743332 5777777543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=2e-14  Score=134.95  Aligned_cols=213  Identities=12%  Similarity=0.071  Sum_probs=138.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      +.++++||||++.||+++++.|+++|++|+++.|+.+++.++.....+     .....++..+.+|++|.+++.++++  
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE-----QFEPQKTLFIQCDVADQQQLRDTFRKV   76 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----TSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----hcCCCcEEEEEeecCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999998876555432211     0112356689999999988887663  


Q ss_pred             -----CcCEEEEccCCCCCCC---CccccHHHHHHHHHHHHH----cC---CCeEEEEecccccccccCCCCCCCCccch
Q 044905           81 -----NAGKVVVTIGPTEDGP---TSEVSTSDAFQVIQAAQL----AG---VGHVAIIYDGNTTAASTYNVLDGISSFFN  145 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~---~~~vn~~~~~~ll~Aa~~----~g---Vk~~V~vSSs~v~~~~~~~~~~~~~~~~~  145 (427)
                           ++|++||++|......   .+++|+.+..++.+++..    .+   -.+||++||.+...+     ......|..
T Consensus        77 ~~~~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~-----~~~~~~Y~a  151 (254)
T d2gdza1          77 VDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP-----VAQQPVYCA  151 (254)
T ss_dssp             HHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTCHHHHH
T ss_pred             HHHcCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccC-----CCCccchHH
Confidence                 6899999999876644   556777777776666543    22   246998887762111     111222222


Q ss_pred             hhhhccccccHHHHH------HHHhcCCCeEEEEeCCCCCCCCCCCccce-EEe-cc--------cccCCCCCcccHHHH
Q 044905          146 NLFSRNQPLTVPEFL------QKVIETDVSYTFIKTSLTEDFSPESSYNV-VVS-AE--------ASVDANDYKVAKSQI  209 (427)
Q Consensus       146 ~~~~k~~~l~~E~~l------~~l~~~gl~~tilRPG~~~~~~~~~~~~i-~~~-~~--------~~~~~~~~~i~v~DV  209 (427)
                      ...      +...+.      ..+...|+++..|.||+++.........- ... ..        ..+..  .+...+||
T Consensus       152 sKa------al~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--r~~~pedv  223 (254)
T d2gdza1         152 SKH------GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYY--GILDPPLI  223 (254)
T ss_dssp             HHH------HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHH--CCBCHHHH
T ss_pred             HHH------HHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCC--CCcCHHHH
Confidence            111      122222      23457899999999997754211000000 000 00        00011  25688999


Q ss_pred             HHHHHHHhcCcccccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      |++++.++++. ...|.++.|.++.
T Consensus       224 A~~v~fL~s~~-~itG~~i~VdGG~  247 (254)
T d2gdza1         224 ANGLITLIEDD-ALNGAIMKITTSK  247 (254)
T ss_dssp             HHHHHHHHHCT-TCSSCEEEEETTT
T ss_pred             HHHHHHHHcCC-CCCCCEEEECCCC
Confidence            99999999864 3578999998885

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.53  E-value=4.4e-14  Score=131.92  Aligned_cols=209  Identities=16%  Similarity=0.120  Sum_probs=132.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGV-PELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      +.|+||||++.||+.+++.|+++|++|++.. |+...++.+......+       ..++..+.+|++|.+++.++++   
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~   74 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY-------GGQAITFGGDVSKEADVEAMMKTAI   74 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-------TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-------CCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999998865 4554444443322111       2355689999999988877664   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          +.|++||++|.....+           .+++|+.++..+.+++    ++.+-.+||++||.....+.     ....
T Consensus        75 ~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~-----~~~~  149 (244)
T d1edoa_          75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----IGQA  149 (244)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----TTCH
T ss_pred             HHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC-----CCCH
Confidence                6899999999776543           5567777777776655    44566799999987632111     1112


Q ss_pred             ccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc-ceEE-ecccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY-NVVV-SAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~-~i~~-~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .|..     +| -+...+.    ..+...|+++..|.||+++........ ...- .....+..  -+...+|||++++.
T Consensus       150 ~Y~a-----sK-aal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~--R~~~p~dvA~~v~f  221 (244)
T d1edoa_         150 NYAA-----AK-AGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLG--RTGQPENVAGLVEF  221 (244)
T ss_dssp             HHHH-----HH-HHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTC--SCBCHHHHHHHHHH
T ss_pred             HHHH-----HH-HHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCC--CCcCHHHHHHHHHH
Confidence            2222     11 1233333    334467999999999977532110000 0000 00111111  26789999999998


Q ss_pred             Hh-cCccc-ccCcEEEEecC
Q 044905          216 VF-SNTAV-AENKVVKVFTD  233 (427)
Q Consensus       216 al-~~~~~-~~g~~~nI~~~  233 (427)
                      ++ +.... ..|.++.+-++
T Consensus       222 La~S~~a~~itG~~i~vdGG  241 (244)
T d1edoa_         222 LALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             HHHCSGGGGCCSCEEEESTT
T ss_pred             HHCCchhcCCcCCeEEeCCC
Confidence            74 43222 36788888776

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.53  E-value=2e-13  Score=128.65  Aligned_cols=217  Identities=12%  Similarity=0.073  Sum_probs=132.2

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |...+.++||||++.||+.+++.|+++|++|++..|+.++++++.......    .....++..+.+|++|.+++.++++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~----~~~~~~~~~~~~Dvt~~~~v~~~~~   77 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAA----GVSEQNVNSVVADVTTDAGQDEILS   77 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCCcCceEEEEccCCCHHHHHHHHH
Confidence            556789999999999999999999999999999999987765554322110    0012356789999999988887664


Q ss_pred             -------CcCEEEEccCCCCCCC---------------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCC
Q 044905           81 -------NAGKVVVTIGPTEDGP---------------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~---------------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~  135 (427)
                             ++|++||++|......               .+++|+.++..+.+++...   +-.++|.++|+...    ..
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~----~~  153 (264)
T d1spxa_          78 TTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASG----LH  153 (264)
T ss_dssp             HHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSS----SS
T ss_pred             HHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccc----cc
Confidence                   6899999998643210               4566777877777766432   23466666655411    01


Q ss_pred             CCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc---eEEec--------ccccCCC
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN---VVVSA--------EASVDAN  200 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~---i~~~~--------~~~~~~~  200 (427)
                      .......|..     +| -+...+.    ..+...|+++..|.||++..........   .....        ...+.. 
T Consensus       154 ~~~~~~~Y~a-----sK-aal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~-  226 (264)
T d1spxa_         154 ATPDFPYYSI-----AK-AAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG-  226 (264)
T ss_dssp             CCTTSHHHHH-----HH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS-
T ss_pred             cCCCchhhhh-----hh-hhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC-
Confidence            1111122221     11 1233333    3344679999999999765422111000   00000        001111 


Q ss_pred             CCcccHHHHHHHHHHHhcCc-cc-ccCcEEEEecC
Q 044905          201 DYKVAKSQIASLVADVFSNT-AV-AENKVVKVFTD  233 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~-~~-~~g~~~nI~~~  233 (427)
                       -+...+|||++++.+++++ .. ..|..+.+-++
T Consensus       227 -R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         227 -VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             -SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             -CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence             2568999999999988643 23 36888888776

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.6e-13  Score=131.72  Aligned_cols=217  Identities=14%  Similarity=0.121  Sum_probs=136.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      -+.++++||||++.||+++++.|+++|++|++..|+.++++.........  +......++..+.+|++|.+++.++++ 
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~--~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQAN--LPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--SCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh--hccccCceEEEEeccCCCHHHHHHHHHH
Confidence            35689999999999999999999999999999999987665443321100  000112356789999999998887664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH----cCCCeEEEEecccccccccCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL----AGVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~----~gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                            +.|++||++|.....+           .+++|+.++..+++++..    .+..++|.+||++.. .  .   ..
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~-~--~---~~  161 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-G--F---PL  161 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTT-C--C---TT
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccc-c--c---cc
Confidence                  6899999999765533           567787788887776643    345567766544321 1  1   11


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCccc-e---EEec--ccccCCCCCcccHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESSYN-V---VVSA--EASVDANDYKVAKSQI  209 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~~~-i---~~~~--~~~~~~~~~~i~v~DV  209 (427)
                      ..     .|+-.+ .+.+.+.+.+    ...|+++..|.||++.......... .   ....  ...+..  -+...+||
T Consensus       162 ~~-----~Y~asK-aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plg--R~g~pedv  233 (297)
T d1yxma1         162 AV-----HSGAAR-AGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK--RIGVPEEV  233 (297)
T ss_dssp             CH-----HHHHHH-HHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTS--SCBCTHHH
T ss_pred             cc-----cchhHH-HHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCC--CCcCHHHH
Confidence            11     122111 1233444333    3678999999999664321100000 0   0000  001111  25678999


Q ss_pred             HHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          210 ASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       210 A~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |.+++.++++... ..|.++.|-++.
T Consensus       234 A~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         234 SSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            9999999975333 368888888774

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.52  E-value=1.7e-13  Score=129.14  Aligned_cols=212  Identities=10%  Similarity=0.041  Sum_probs=134.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.++++||||++.||+++++.|+++|++|++..|+.+. ++.+......       ...++..+.+|++|++++.++++ 
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-------~g~~~~~~~~Dvt~~~~v~~~~~~   78 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-------VGGEAIAVKGDVTVESDVINLVQS   78 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh-------cCCcEEEEEccCCCHHHHHHHHHH
Confidence            45789999999999999999999999999999998753 3333322111       02345688999999988887764 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCC-CeEEEEecccccccccCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGV-GHVAIIYDGNTTAASTYNVLD  138 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gV-k~~V~vSSs~v~~~~~~~~~~  138 (427)
                            +.|++||++|.....+           .+++|+.++..+.+++    .+.+. .+|+++||.+...+     ..
T Consensus        79 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~-----~~  153 (261)
T d1geea_          79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----WP  153 (261)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----CT
T ss_pred             HHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc-----Cc
Confidence                  6899999999766533           4667777777776655    44454 35777887652111     11


Q ss_pred             CCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCcc-c-eEEe--cccccCCCCCcccHHHHH
Q 044905          139 GISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSY-N-VVVS--AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       139 ~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~-~-i~~~--~~~~~~~~~~~i~v~DVA  210 (427)
                      ....|.     -+| .+...+.+    .+...|+++..|.||++......... . -...  ....+..  -+...+|||
T Consensus       154 ~~~~Y~-----asK-aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~pediA  225 (261)
T d1geea_         154 LFVHYA-----ASK-GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG--YIGEPEEIA  225 (261)
T ss_dssp             TCHHHH-----HHH-HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS--SCBCHHHHH
T ss_pred             cccccc-----cCC-ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC--CCCCHHHHH
Confidence            112222     221 12333333    34467999999999977542110000 0 0000  0011111  256899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecCC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ++++.++++... ..|.++.|-++.
T Consensus       226 ~~v~fL~S~~s~~itG~~i~vDGG~  250 (261)
T d1geea_         226 AVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHhCchhcCCcCCeEEECCCe
Confidence            999999874333 368899998874

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.51  E-value=1.5e-13  Score=128.92  Aligned_cols=210  Identities=17%  Similarity=0.147  Sum_probs=134.2

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.+.++++||||++.||+.+++.|+++|++|++..|+.++++++.....          .+..++.+|++|.+++.++++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----------~~~~~~~~Dv~~~~~~~~~~~   72 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----------ERSMFVRHDVSSEADWTLVMA   72 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------TTEEEECCCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------CCeEEEEeecCCHHHHHHHHH
Confidence            5677899999999999999999999999999999999877666543221          233478899999888777664


Q ss_pred             -------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCCCCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                             ..|++||++|.....+           .+++|+.++..+++++...   .-.+||++||.....+     ...
T Consensus        73 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~-----~~~  147 (253)
T d1hxha_          73 AVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLP-----IEQ  147 (253)
T ss_dssp             HHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSC-----CTT
T ss_pred             HHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcC-----ccc
Confidence                   6899999999765432           5567777777776665431   2368999987762111     111


Q ss_pred             CCccchhhhhccccccHHHHHHHH----hc--CCCeEEEEeCCCCCCCC-----CCC-ccceEEecccccCCCC-CcccH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKV----IE--TDVSYTFIKTSLTEDFS-----PES-SYNVVVSAEASVDAND-YKVAK  206 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l----~~--~gl~~tilRPG~~~~~~-----~~~-~~~i~~~~~~~~~~~~-~~i~v  206 (427)
                      ...|     +-++ .+...+.+.+    ..  .++++..|-||++....     +.. .......  .....++ .+...
T Consensus       148 ~~~Y-----~asK-aal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~--~~~~~~~gr~~~p  219 (253)
T d1hxha_         148 YAGY-----SASK-AAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLH--DPKLNRAGRAYMP  219 (253)
T ss_dssp             BHHH-----HHHH-HHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBC--BTTTBTTCCEECH
T ss_pred             cccc-----cchh-HHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHh--CccccccCCCCCH
Confidence            1222     2221 1233333322    23  45899999999654311     000 0000000  0011111 25678


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +|||++++.++++... ..|..+.+-++
T Consensus       220 edvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         220 ERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            9999999999874333 36788888776

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=9.8e-14  Score=129.56  Aligned_cols=188  Identities=12%  Similarity=0.076  Sum_probs=127.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++|||||+.||++++++|+++|++|++.+|+.++++.+......       ...++..+.+|++|.+++..+++   
T Consensus         7 Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~-------~~~~~~~~~~Dvs~~~~v~~~~~~i~   79 (244)
T d1yb1a_           7 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-------LGAKVHTFVVDCSNREDIYSSAKKVK   79 (244)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999877666443221       13456789999999988887653   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          .+|++|||+|......           .+++|+.++.++++++    .+.+-.+||++||.....        +.+
T Consensus        80 ~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~--------~~~  151 (244)
T d1yb1a_          80 AEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV--------SVP  151 (244)
T ss_dssp             HHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CC--------CHH
T ss_pred             HHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcC--------CCC
Confidence                5899999999876543           5667777777776654    456777899999877321        111


Q ss_pred             ccchhhhhccccccHHHHHHHHh-------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI-------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~-------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      .+  ..|+.++ -+...+.+.+.       ..|+.++.|.||++.....   ..     ......  ..+..+|+|+.++
T Consensus       152 ~~--~~Y~asK-aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~---~~-----~~~~~~--~~~~pe~va~~i~  218 (244)
T d1yb1a_         152 FL--LAYCSSK-FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFI---KN-----PSTSLG--PTLEPEEVVNRLM  218 (244)
T ss_dssp             HH--HHHHHHH-HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCST---TC-----THHHHC--CCCCHHHHHHHHH
T ss_pred             Cc--HHHHHHH-HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhh---hC-----cCcccc--CCCCHHHHHHHHH
Confidence            11  1232222 22333333332       2589999999996543211   00     011111  3567899999998


Q ss_pred             HHhcC
Q 044905          215 DVFSN  219 (427)
Q Consensus       215 ~al~~  219 (427)
                      ..+..
T Consensus       219 ~~~~~  223 (244)
T d1yb1a_         219 HGILT  223 (244)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            87653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.50  E-value=1.7e-13  Score=129.81  Aligned_cols=218  Identities=10%  Similarity=0.095  Sum_probs=135.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |...++++||||++.||+.+++.|+++|++|++..|+.++++++.......    .....++..+.+|++|++++.++++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~----~~~~~~~~~~~~Dvs~~~~v~~~~~   77 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS----GVSEKQVNSVVADVTTEDGQDQIIN   77 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----TCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----CCCCCceEEEEccCCCHHHHHHHHH
Confidence            456789999999999999999999999999999999988766554432110    0012356789999999988877664


Q ss_pred             -------CcCEEEEccCCCCCCC---------------CccccHHHHHHHHHHHHHc---CCCeEEEEecccccccccCC
Q 044905           81 -------NAGKVVVTIGPTEDGP---------------TSEVSTSDAFQVIQAAQLA---GVGHVAIIYDGNTTAASTYN  135 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~---------------~~~vn~~~~~~ll~Aa~~~---gVk~~V~vSSs~v~~~~~~~  135 (427)
                             ++|++||++|....++               .+++|+.++.++++++...   +-..+|+++|+..  +.  .
T Consensus        78 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a--~~--~  153 (272)
T d1xkqa_          78 STLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVA--GP--Q  153 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG--SS--S
T ss_pred             HHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhc--cc--c
Confidence                   6899999999765322               2356777777777766432   2345666655431  10  1


Q ss_pred             CCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCcc--c-e-------E-EecccccCCC
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSY--N-V-------V-VSAEASVDAN  200 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~--~-i-------~-~~~~~~~~~~  200 (427)
                      .......|.     -.| -+...+.    ..+...|+++..|.||++.........  . .       . ......+.. 
T Consensus       154 ~~~~~~~Y~-----asK-aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg-  226 (272)
T d1xkqa_         154 AQPDFLYYA-----IAK-AALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG-  226 (272)
T ss_dssp             CCCSSHHHH-----HHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS-
T ss_pred             CCCCcchhh-----hHH-HHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC-
Confidence            111112222     111 1123333    334478999999999976532110000  0 0       0 000011111 


Q ss_pred             CCcccHHHHHHHHHHHhcCc-cc-ccCcEEEEecCC
Q 044905          201 DYKVAKSQIASLVADVFSNT-AV-AENKVVKVFTDP  234 (427)
Q Consensus       201 ~~~i~v~DVA~~v~~al~~~-~~-~~g~~~nI~~~~  234 (427)
                       -+...+|||++++.+++.. .. ..|.++.+-++.
T Consensus       227 -R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~  261 (272)
T d1xkqa_         227 -AAGKPEHIANIILFLADRNLSFYILGQSIVADGGT  261 (272)
T ss_dssp             -SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             -CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCH
Confidence             2568999999999988632 23 368899998874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.50  E-value=1.3e-13  Score=129.62  Aligned_cols=219  Identities=10%  Similarity=0.109  Sum_probs=132.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc---
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG---   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~---   80 (427)
                      .++++||||++.||+++++.|+++|++|++..|+..++.++.....+      ....++..+.+|++|++++.++++   
T Consensus         9 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           9 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK------EFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             TEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHH------HHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH------HhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999998876554332111      012345689999999998887764   


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCC-eEEEEecccccccccCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVG-HVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk-~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                          +.|++||++|.....+           .+++|+.++.++.+++.    +.+.. .++.++|........ ....+.
T Consensus        83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~-~~~~~~  161 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ-SSLNGS  161 (260)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCE-EETTEE
T ss_pred             HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccc-cccccC
Confidence                5899999999765533           45677777777766543    33434 444444433211111 000010


Q ss_pred             CccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc-eEEe-cccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN-VVVS-AEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~-i~~~-~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +  ....|.-.| .+...+.+    .+...|+++..|.||++.......... ..-. ....+..  -+...+|||.+++
T Consensus       162 ~--~~~~Y~asK-aal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~--R~g~pedvA~~v~  236 (260)
T d1h5qa_         162 L--TQVFYNSSK-AACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLN--RFAQPEEMTGQAI  236 (260)
T ss_dssp             C--SCHHHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTS--SCBCGGGGHHHHH
T ss_pred             c--cccchhhhh-hhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCC--CCcCHHHHHHHHH
Confidence            1  111222222 12333333    344679999999999775422111100 0000 0011111  2668999999999


Q ss_pred             HHhcCccc-ccCcEEEEecCC
Q 044905          215 DVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       215 ~al~~~~~-~~g~~~nI~~~~  234 (427)
                      .++++... ..|.++.+-++.
T Consensus       237 fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         237 LLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             HHHSGGGTTCCSCEEEECTTG
T ss_pred             HHhcchhCCCcCceEEECCCe
Confidence            98874333 367888887773

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.50  E-value=2.6e-13  Score=128.64  Aligned_cols=217  Identities=12%  Similarity=0.069  Sum_probs=135.4

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |-+.++++||||++.||+++++.|+++|++|++..|+.++++.+.......    .....++..+.+|++|++++.++++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA----GVPAEKINAVVADVTEASGQDDIIN   76 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----TCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc----CCCCcceEEEEeeCCCHHHHHHHHH
Confidence            567889999999999999999999999999999999987765554322110    0012456789999999988877664


Q ss_pred             -------CcCEEEEccCCCCCCC-------------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCC
Q 044905           81 -------NAGKVVVTIGPTEDGP-------------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~~~-------------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~  136 (427)
                             ..|++||++|......             .+++|+.++..+.+++.    +.+-.+++++||.+..     ..
T Consensus        77 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~-----~~  151 (274)
T d1xhla_          77 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP-----QA  151 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS-----SC
T ss_pred             HHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcc-----cc
Confidence                   6899999998643321             45567777777766654    3455566655554311     11


Q ss_pred             CCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCcc--c--------eEE-ecccccCCCC
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSY--N--------VVV-SAEASVDAND  201 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~--~--------i~~-~~~~~~~~~~  201 (427)
                      ......|.     -+| -+...+.+    .+...|+++..|.||++.........  .        ... .....+..  
T Consensus       152 ~~~~~~Y~-----asK-aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlg--  223 (274)
T d1xhla_         152 HSGYPYYA-----CAK-AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG--  223 (274)
T ss_dssp             CTTSHHHH-----HHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS--
T ss_pred             CCCCceeh-----hhh-hHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCC--
Confidence            11122222     211 12233333    34467999999999977542110000  0        000 00011111  


Q ss_pred             CcccHHHHHHHHHHHhcC-ccc-ccCcEEEEecCC
Q 044905          202 YKVAKSQIASLVADVFSN-TAV-AENKVVKVFTDP  234 (427)
Q Consensus       202 ~~i~v~DVA~~v~~al~~-~~~-~~g~~~nI~~~~  234 (427)
                      -+...+|||++++.+++. ... ..|..+.+-++.
T Consensus       224 R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         224 HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence            256899999999998863 223 378889988874

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.50  E-value=2.6e-13  Score=127.08  Aligned_cols=196  Identities=15%  Similarity=0.135  Sum_probs=130.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcch---HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGA---AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~---~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +..+|+||||+|.||..++++|+++|+ +|+.+.|+...   ...+......       ...++.++.+|++|.+++.++
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-------~g~~v~~~~~Dv~d~~~~~~~   80 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-------LGARTTVAACDVTDRESVREL   80 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-------TTCEEEEEECCTTCHHHHHHH
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-------ccccccccccccchHHHHHHh
Confidence            446999999999999999999999998 58888887432   2222221110       023567899999999999988


Q ss_pred             hc------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           79 IG------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        79 l~------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                      ++      +.|.|||++|.....+           .+.+|+.+..++.+++...+..+||++||.+...+..     +..
T Consensus        81 ~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~-----~~~  155 (259)
T d2fr1a1          81 LGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-----GLG  155 (259)
T ss_dssp             HHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-----TCT
T ss_pred             hccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc-----ccH
Confidence            75      3689999999876543           4567888888999988888888999998886322211     112


Q ss_pred             ccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHHHhcCc
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNT  220 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~al~~~  220 (427)
                      .|..     .+ ...+.+.+.++..|++++.|.||.+.+...  ....... . -...++..++.+++++++..++...
T Consensus       156 ~YaA-----ak-a~l~~la~~~~~~Gi~v~~I~pg~~~~~g~--~~~~~~~-~-~~~~G~~~~~~~~~~~~l~~~l~~~  224 (259)
T d2fr1a1         156 GYAP-----GN-AYLDGLAQQRRSDGLPATAVAWGTWAGSGM--AEGPVAD-R-FRRHGVIEMPPETACRALQNALDRA  224 (259)
T ss_dssp             TTHH-----HH-HHHHHHHHHHHHTTCCCEEEEECCBC----------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHH-----HH-HhHHHHHHHHHhCCCCEEECCCCcccCCcc--ccchHHH-H-HHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            2221     11 124555566667899999999996543110  0111110 0 1112335688999999999988754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.49  E-value=4.1e-13  Score=125.12  Aligned_cols=166  Identities=12%  Similarity=0.129  Sum_probs=107.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLR---EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~---~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |++|+|||||+.||..+++.|++   +|++|++..|+.++++.+......        ..++.++.+|++|++++.++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~Dvs~~~~v~~~~~   73 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN--------HSNIHILEIDLRNFDAYDKLVA   73 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH--------CTTEEEEECCTTCGGGHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc--------CCcEEEEEEEeccHHHHHHHHh
Confidence            67999999999999999999984   699999999999877666432221        3567789999999877765543


Q ss_pred             ---------CcCEEEEccCCCCCC-C-----------CccccHHHHHHHHHHHHH----c-----------CCCeEEEEe
Q 044905           81 ---------NAGKVVVTIGPTEDG-P-----------TSEVSTSDAFQVIQAAQL----A-----------GVGHVAIIY  124 (427)
Q Consensus        81 ---------g~d~Vi~~ag~~~~~-~-----------~~~vn~~~~~~ll~Aa~~----~-----------gVk~~V~vS  124 (427)
                               .+|++||++|..... +           .+++|+.+...+++++..    .           +..++|.++
T Consensus        74 ~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          74 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             hhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence                     489999999965432 1           456777787777766532    1           356788888


Q ss_pred             cccccccccCCCCCCCCccchhhhhccccccHHHHHHHHhcCCCeEEEEeCCCCCCC
Q 044905          125 DGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTEDF  181 (427)
Q Consensus       125 Ss~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~~~gl~~tilRPG~~~~~  181 (427)
                      |..-  ........+...|.....+-.  ...+.+-..+...|+++..|.||++...
T Consensus       154 S~~g--~~~~~~~~~~~~Y~aSKaal~--~lt~~la~e~~~~gI~vn~v~PG~v~T~  206 (248)
T d1snya_         154 SILG--SIQGNTDGGMYAYRTSKSALN--AATKSLSVDLYPQRIMCVSLHPGWVKTD  206 (248)
T ss_dssp             CGGG--CSTTCCSCCCHHHHHHHHHHH--HHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred             cccc--ccCCCCCCChHHHHHHHHHHH--HHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence            7641  111111111112221111100  0112222334467999999999977653

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.49  E-value=1.4e-13  Score=127.42  Aligned_cols=203  Identities=15%  Similarity=0.142  Sum_probs=130.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~g   81 (427)
                      ..++++||||++.||+++++.|+++|++|++..|+.+.++   ..+.             .++.+|+++ .+.+.+.+..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~---~~~~-------------~~~~~Dv~~~~~~~~~~~g~   66 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK---RSGH-------------RYVVCDLRKDLDLLFEKVKE   66 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH---HTCS-------------EEEECCTTTCHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH---hcCC-------------cEEEcchHHHHHHHHHHhCC
Confidence            4679999999999999999999999999999999865433   2222             378899986 5677777889


Q ss_pred             cCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCCccchh
Q 044905           82 AGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGISSFFNN  146 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~  146 (427)
                      +|++||++|.....+           .+++|+.++..+++++    ++.+..++|+++|.......     ....     
T Consensus        67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~-----~~~~-----  136 (234)
T d1o5ia_          67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----ENLY-----  136 (234)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----TTBH-----
T ss_pred             CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc-----cccc-----
Confidence            999999999765433           4456666666666554    45566788888876531110     1111     


Q ss_pred             hhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCC-ccceEEec--ccccCCCCCcccHHHHHHHHHHHhcC
Q 044905          147 LFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPES-SYNVVVSA--EASVDANDYKVAKSQIASLVADVFSN  219 (427)
Q Consensus       147 ~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~-~~~i~~~~--~~~~~~~~~~i~v~DVA~~v~~al~~  219 (427)
                      .|+..+ .+...+.+    .+...|+++..|.||++....... ...-....  ...+..  -+...+|||.+++.++++
T Consensus       137 ~Y~asK-aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~--R~~~pediA~~v~fL~S~  213 (234)
T d1o5ia_         137 TSNSAR-MALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR--RMAKPEEIASVVAFLCSE  213 (234)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS--SCBCHHHHHHHHHHHHSG
T ss_pred             cchhHH-HHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC--CCcCHHHHHHHHHHHhCh
Confidence            121111 12333333    344678999999999775432110 00000000  011111  267899999999998874


Q ss_pred             ccc-ccCcEEEEecCC
Q 044905          220 TAV-AENKVVKVFTDP  234 (427)
Q Consensus       220 ~~~-~~g~~~nI~~~~  234 (427)
                      ... ..|.++.+-++-
T Consensus       214 ~s~~itG~~i~vDGG~  229 (234)
T d1o5ia_         214 KASYLTGQTIVVDGGL  229 (234)
T ss_dssp             GGTTCCSCEEEESTTC
T ss_pred             hhcCCcCcEEEECccc
Confidence            333 368888887774

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.47  E-value=1.3e-12  Score=123.90  Aligned_cols=212  Identities=11%  Similarity=0.052  Sum_probs=131.3

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-   79 (427)
                      |.+.++++||||++.||+++++.|+++|++|+++.|+.++++++....          ..++..+.+|++|.+++.+++ 
T Consensus         2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----------~~~~~~~~~Dv~~~~~~~~~~~   71 (276)
T d1bdba_           2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----------GDNVLGIVGDVRSLEDQKQAAS   71 (276)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------CCCeeEEecccccHHHHHHHHH
Confidence            345679999999999999999999999999999999987766554321          134568999999988887765 


Q ss_pred             ------cCcCEEEEccCCCCCCC----------------CccccHHHHHHHHHHH----HHcCCCeEEEEeccccccccc
Q 044905           80 ------GNAGKVVVTIGPTEDGP----------------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        80 ------~g~d~Vi~~ag~~~~~~----------------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~  133 (427)
                            ..+|++||++|......                .+++|+.++..+++++    ++.+ .++|+++|+....+  
T Consensus        72 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~--  148 (276)
T d1bdba_          72 RCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYP--  148 (276)
T ss_dssp             HHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTST--
T ss_pred             HHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccC--
Confidence                  36899999999653311                3456677777776655    3444 57888876652111  


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHHHHh---cCCCeEEEEeCCCCCCCCC-CCccceEE---ecc-----cccCCCC
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQKVI---ETDVSYTFIKTSLTEDFSP-ESSYNVVV---SAE-----ASVDAND  201 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~---~~gl~~tilRPG~~~~~~~-~~~~~i~~---~~~-----~~~~~~~  201 (427)
                         ......|.     -+| -+...+.+.+.   ..++++..|.||++..... +.......   ...     .....++
T Consensus       149 ---~~~~~~Y~-----asK-aal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  219 (276)
T d1bdba_         149 ---NGGGPLYT-----AAK-HAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI  219 (276)
T ss_dssp             ---TSSCHHHH-----HHH-HHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT
T ss_pred             ---CCCCchHH-----HHH-HHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC
Confidence               11112222     221 12333333332   2359999999996653221 11111000   000     0001111


Q ss_pred             -CcccHHHHHHHHHHHhcCc-cc-ccCcEEEEecCC
Q 044905          202 -YKVAKSQIASLVADVFSNT-AV-AENKVVKVFTDP  234 (427)
Q Consensus       202 -~~i~v~DVA~~v~~al~~~-~~-~~g~~~nI~~~~  234 (427)
                       -+...+|||.+++.+++.+ .. ..|..+.|-++-
T Consensus       220 gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         220 GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence             1457899999999887532 22 468899987773

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.45  E-value=7.9e-13  Score=123.32  Aligned_cols=199  Identities=15%  Similarity=0.183  Sum_probs=121.5

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |.+++|+|||||+.||.+++++|+++|+  .|++..|+.++++++...          ...++.++.+|++|.+++.+++
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~----------~~~~~~~~~~Dvs~~~~v~~~~   70 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----------KDSRVHVLPLTVTCDKSLDTFV   70 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----------CCTTEEEEECCTTCHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh----------hCCceEEEEEecCCHHHHHHHH
Confidence            6789999999999999999999999994  788899999877666431          1346779999999998887665


Q ss_pred             c---------CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHH----c-----------CCCeEEEE
Q 044905           80 G---------NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQL----A-----------GVGHVAII  123 (427)
Q Consensus        80 ~---------g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~----~-----------gVk~~V~v  123 (427)
                      +         +.|++||+||.... ++           .+++|+.++.++++++..    .           ...+++.+
T Consensus        71 ~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~  150 (250)
T d1yo6a1          71 SKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITI  150 (250)
T ss_dssp             HHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEE
T ss_pred             HHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccc
Confidence            3         38999999996532 11           556788888877766532    1           12356655


Q ss_pred             ecccccccccCCCCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCC
Q 044905          124 YDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDA  199 (427)
Q Consensus       124 SSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~  199 (427)
                      |+..........   +........|+.+| .+...+.    ..+...|+++..|.||++.....         +.     
T Consensus       151 s~~~~~~~~~~~---~~~~~~~~aY~aSK-aal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~---------~~-----  212 (250)
T d1yo6a1         151 SSGLGSITDNTS---GSAQFPVLAYRMSK-AAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG---------GK-----  212 (250)
T ss_dssp             CCGGGCSTTCCS---TTSSSCBHHHHHHH-HHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------
T ss_pred             ccccccccCCcc---cccchhHHHHHHHH-HHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCC---------CC-----
Confidence            544321111111   11111111233222 2222333    33446789999999997764221         00     


Q ss_pred             CCCcccHHHHHHHHHHHhcCcc-cccCcEEE
Q 044905          200 NDYKVAKSQIASLVADVFSNTA-VAENKVVK  229 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~-~~~g~~~n  229 (427)
                       ...++.++.+..++..+.... ...|+.|+
T Consensus       213 -~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~  242 (250)
T d1yo6a1         213 -NAALTVEQSTAELISSFNKLDNSHNGRFFM  242 (250)
T ss_dssp             -------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred             -CCCCCHHHHHHHHHHHHhcCCCCCCeEEEC
Confidence             024567888888888876543 23466554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.44  E-value=4.3e-13  Score=128.96  Aligned_cols=201  Identities=18%  Similarity=0.179  Sum_probs=128.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc---------hHHHHHHHHhhhhhhhhhhhccceEEEecCCCH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG---------AAQELARLAASYKILSKEELKRLNAVESNFDSA   72 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~---------~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~   72 (427)
                      .+.++++||||++.||+.+++.|+++|++|++.+|+.+         .++.+.....          .+...+.+|+.|.
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~d~~~~   74 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR----------RRGGKAVANYDSV   74 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH----------HTTCEEEEECCCG
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh----------hcccccccccchH
Confidence            45678999999999999999999999999999876543         2233322111          1223567788886


Q ss_pred             HHHHHH-------hcCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccc
Q 044905           73 ESIAKA-------IGNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTA  130 (427)
Q Consensus        73 ~sl~~a-------l~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~  130 (427)
                      +++.++       +.++|++|||||....++           .+++|+.++.++++++    ++.+-.+||++||.+...
T Consensus        75 ~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~  154 (302)
T d1gz6a_          75 EAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIY  154 (302)
T ss_dssp             GGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcC
Confidence            554443       347999999999876543           5678888888877765    455777999999876321


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccH
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAK  206 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v  206 (427)
                      +.     .....|..     +| .+...+.+.    +...|+++..|.||++.........       ...   ...+..
T Consensus       155 ~~-----~~~~~Y~a-----sK-aal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~-------~~~---~~~~~P  213 (302)
T d1gz6a_         155 GN-----FGQANYSA-----AK-LGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP-------EDL---VEALKP  213 (302)
T ss_dssp             CC-----TTCHHHHH-----HH-HHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC-------HHH---HHHSCG
T ss_pred             CC-----CCcHHHHH-----HH-HHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc-------Hhh---HhcCCH
Confidence            11     11222222     21 123333333    3367899999999966443211100       000   024567


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecC
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTD  233 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~  233 (427)
                      +|||.+++.+++......|.++.+.++
T Consensus       214 edvA~~v~fL~S~~a~itG~~i~vdGG  240 (302)
T d1gz6a_         214 EYVAPLVLWLCHESCEENGGLFEVGAG  240 (302)
T ss_dssp             GGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred             HHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence            999999999886433346777777655

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.44  E-value=1.9e-12  Score=122.29  Aligned_cols=213  Identities=16%  Similarity=0.119  Sum_probs=133.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.++++|||||+.||+.|++.|+++|++|++..|+.+. ++.+......       ...++..+.+|++|++++.+.++ 
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-------NGSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-------TTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh-------hCCceeeEeCCCCCHHHHHHHHHH
Confidence            45799999999999999999999999999999887653 3333322111       12345688999999888887664 


Q ss_pred             ------CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ------NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ------g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                            +.|++||++|.....+           .+++|+.++..+++++...  .-.++++++|+.-  ..  .......
T Consensus        90 ~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~--~~--~~~~~~~  165 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QA--KAVPKHA  165 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TC--SSCSSCH
T ss_pred             HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc--cc--ccccchh
Confidence                  6899999999776543           5567777888888877653  2346777776541  11  1111111


Q ss_pred             ccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCC-----C---ccceEE-------ecccccCCCCC
Q 044905          142 SFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPE-----S---SYNVVV-------SAEASVDANDY  202 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~-----~---~~~i~~-------~~~~~~~~~~~  202 (427)
                      .     |+-.+ -+.+.+.+    .+...|+++..|.||++......     .   ......       .....+..  -
T Consensus       166 ~-----Y~asK-aal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg--R  237 (272)
T d1g0oa_         166 V-----YSGSK-GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR--R  237 (272)
T ss_dssp             H-----HHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC--S
T ss_pred             h-----HHHHH-HHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC--C
Confidence            1     21111 12333333    33467999999999976531100     0   000000       00011112  2


Q ss_pred             cccHHHHHHHHHHHhcCcccc-cCcEEEEecCC
Q 044905          203 KVAKSQIASLVADVFSNTAVA-ENKVVKVFTDP  234 (427)
Q Consensus       203 ~i~v~DVA~~v~~al~~~~~~-~g~~~nI~~~~  234 (427)
                      +...+|||.+++.+++....+ .|.++.|-++.
T Consensus       238 ~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         238 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            678999999999998743333 67888887763

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.44  E-value=7.8e-13  Score=123.73  Aligned_cols=203  Identities=15%  Similarity=0.112  Sum_probs=127.8

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHH-------HHH
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESI-------AKA   78 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl-------~~a   78 (427)
                      +++||||++.||+.+++.|+++|++|.+..|+...++++......             +..+|+.|.+++       .+.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~-------------~~~~dv~~~~~~~~~~~~~~~~   68 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET-------------YPQLKPMSEQEPAELIEAVTSA   68 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-------------CTTSEECCCCSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc-------------EEEeccCCHHHHHHHHHHHHHH
Confidence            789999999999999999999999999999998877777654443             334555553333       334


Q ss_pred             hcCcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           79 IGNAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                      +.+.|++|||+|.... .+           .+++|+.++..+++++    ++.+-.+||++||.+...+     ......
T Consensus        69 ~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~-----~~~~~~  143 (252)
T d1zmta1          69 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP-----WKELST  143 (252)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC-----CTTCHH
T ss_pred             cCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccc-----cccccc
Confidence            4579999999986532 32           3456666666666654    4556679999988763211     111222


Q ss_pred             cchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccceE-E-ec--------ccccCCCCCcccHHH
Q 044905          143 FFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYNVV-V-SA--------EASVDANDYKVAKSQ  208 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~i~-~-~~--------~~~~~~~~~~i~v~D  208 (427)
                      |.....      +...+.    ..+...|+++..|.||++............ . ..        ...+..  -+...+|
T Consensus       144 Y~asKa------al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~--R~g~ped  215 (252)
T d1zmta1         144 YTSARA------GACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ--RLGTQKE  215 (252)
T ss_dssp             HHHHHH------HHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS--SCBCHHH
T ss_pred             cccccc------cHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC--CCcCHHH
Confidence            222111      123333    334477999999999966542211110000 0 00        001111  2568999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ||.+++.++++... ..|..+.+-++-
T Consensus       216 vA~~v~fL~S~~s~~iTG~~i~vdGG~  242 (252)
T d1zmta1         216 LGELVAFLASGSCDYLTGQVFWLAGGF  242 (252)
T ss_dssp             HHHHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred             HHHHHHHHhCchhcCCcCCeEEECCCc
Confidence            99999999975433 368899998874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.42  E-value=1.6e-12  Score=121.90  Aligned_cols=211  Identities=13%  Similarity=0.061  Sum_probs=130.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      .+++|||||||.||.++++.|+++|++|++..|+.+. .+.+......+       ..++..+.+|++|.+++.+++.  
T Consensus         6 GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~D~~~~~~v~~~~~~~   78 (259)
T d1ja9a_           6 GKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL-------GAQGVAIQADISKPSEVVALFDKA   78 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-------TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc-------CCCceEecCCCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999987665543 34333221110       2345689999999888887664  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCCCc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                           +.|++||++|.....+           .+++|+.+...+++++...  .-.++++++|++-  ..  ........
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~--~~--~~~~~~~~  154 (259)
T d1ja9a_          79 VSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA--VM--TGIPNHAL  154 (259)
T ss_dssp             HHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG--TC--CSCCSCHH
T ss_pred             HHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccc--cc--cCCCCchh
Confidence                 6899999999876543           5567777777777777653  1235666655431  11  11111111


Q ss_pred             cchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCC---------CCccceEE----ec--ccccCCCCCc
Q 044905          143 FFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSP---------ESSYNVVV----SA--EASVDANDYK  203 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~---------~~~~~i~~----~~--~~~~~~~~~~  203 (427)
                           |+-.+ .+.+.+.+    .+...|+++..|.||+++....         ........    ..  ...+..  -+
T Consensus       155 -----Y~asK-~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~  226 (259)
T d1ja9a_         155 -----YAGSK-AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK--RI  226 (259)
T ss_dssp             -----HHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS--SC
T ss_pred             -----HHHHH-HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC--CC
Confidence                 22111 12333333    3446789999999997653100         00000000    00  011112  26


Q ss_pred             ccHHHHHHHHHHHhcCcccc-cCcEEEEecC
Q 044905          204 VAKSQIASLVADVFSNTAVA-ENKVVKVFTD  233 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~~-~g~~~nI~~~  233 (427)
                      ...+|||++++.++++...+ .|..+.+-++
T Consensus       227 g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG  257 (259)
T d1ja9a_         227 GYPADIGRAVSALCQEESEWINGQVIKLTGG  257 (259)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence            78999999999999754333 6788887766

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.42  E-value=2.8e-12  Score=122.12  Aligned_cols=211  Identities=11%  Similarity=0.068  Sum_probs=125.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-----   79 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-----   79 (427)
                      ++++||||||.||++++++|+++|++|+++.|+..++.++......      ....++..+.+|++|.+++.+++     
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~------~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS------QTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH------hcCCceEEEEecccChHHHHHHhhhhhh
Confidence            7899999999999999999999999999999998766544332111      11234568999999999887655     


Q ss_pred             --cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcC-CCeEEEEecccccccccCCCCCCCC
Q 044905           80 --GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAG-VGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 --~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~g-Vk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                        .++|++||++|.....+           .+.+|......+...+    ...+ ...++.++|.....  ..   ....
T Consensus       100 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~--~~---~~~~  174 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--GS---GFVV  174 (294)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--CC---TTCH
T ss_pred             hccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhh--cc---cccc
Confidence              36899999999766543           2333434433333332    2222 33445444433111  10   1111


Q ss_pred             ccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCc---cceEEec--ccccCCCCCcccHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESS---YNVVVSA--EASVDANDYKVAKSQIASL  212 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~---~~i~~~~--~~~~~~~~~~i~v~DVA~~  212 (427)
                      .     |+-.+ -+.+.+.+    .+...|+++-.|.||++........   .......  ...+..  -+...+|||.+
T Consensus       175 ~-----YsasK-aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~--R~~~pediA~~  246 (294)
T d1w6ua_         175 P-----SASAK-AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG--RLGTVEELANL  246 (294)
T ss_dssp             H-----HHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS--SCBCHHHHHHH
T ss_pred             h-----HHHHH-HHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC--CCCCHHHHHHH
Confidence            1     22111 12333333    3346789999999997654211000   0000000  011111  26689999999


Q ss_pred             HHHHhcCccc-ccCcEEEEecCC
Q 044905          213 VADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       213 v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +..++++... ..|.++.+-++.
T Consensus       247 v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         247 AAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTTH
T ss_pred             HHHHhCchhcCCCCcEEEECCCh
Confidence            9999975333 378888888873

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=4.5e-13  Score=124.98  Aligned_cols=209  Identities=13%  Similarity=0.134  Sum_probs=132.9

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-   79 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-   79 (427)
                      |.+.++++||||++.||+.+++.|+++|++|++..|+..+++++..            ...+....+|+.+.+.+.... 
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~------------~~~~~~~~~d~~~~~~~~~~~~   70 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------------YPGIQTRVLDVTKKKQIDQFAN   70 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG------------STTEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------------ccCCceeeeecccccccccccc
Confidence            3456899999999999999999999999999999999765544322            123457788888876655544 


Q ss_pred             --cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHH----HcCCCeEEEEecccccccccCCCCCCCCc
Q 044905           80 --GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQ----LAGVGHVAIIYDGNTTAASTYNVLDGISS  142 (427)
Q Consensus        80 --~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~----~~gVk~~V~vSSs~v~~~~~~~~~~~~~~  142 (427)
                        .+.|++||++|.....+           .+++|+.++..+.+++.    ..+-.++|++||+.-  . . ....... 
T Consensus        71 ~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~-~-~~~~~~~-  145 (245)
T d2ag5a1          71 EVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--S-V-KGVVNRC-  145 (245)
T ss_dssp             HCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--T-T-BCCTTBH-
T ss_pred             ccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--c-c-CCccchh-
Confidence              57899999999876643           45566667777766554    345678999987651  0 0 0001111 


Q ss_pred             cchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccce------EEe--cccccCCCCCcccHHHHH
Q 044905          143 FFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNV------VVS--AEASVDANDYKVAKSQIA  210 (427)
Q Consensus       143 ~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i------~~~--~~~~~~~~~~~i~v~DVA  210 (427)
                          .|+-.+ .+.+.+.+.    +...|+++..|.||+++..........      ...  ....+..  -+...+|||
T Consensus       146 ----~Y~~sK-aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~--R~~~pedva  218 (245)
T d2ag5a1         146 ----VYSTTK-AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG--RFATAEEIA  218 (245)
T ss_dssp             ----HHHHHH-HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS--SCEEHHHHH
T ss_pred             ----HHHHHH-HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC--CCcCHHHHH
Confidence                222222 223444333    346799999999997654211000000      000  0011111  267899999


Q ss_pred             HHHHHHhcCccc-ccCcEEEEecC
Q 044905          211 SLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       211 ~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      +++..++.+... ..|..+.|-++
T Consensus       219 ~~v~fL~s~~s~~iTG~~i~VDGG  242 (245)
T d2ag5a1         219 MLCVYLASDESAYVTGNPVIIDGG  242 (245)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             HHHHHHhChhhCCCcCceEEeCCC
Confidence            999999974333 36788888776

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.41  E-value=1.5e-12  Score=121.73  Aligned_cols=210  Identities=16%  Similarity=0.131  Sum_probs=127.0

Q ss_pred             CCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++++||||||  .||++++++|+++|++|++..|+.............        ..+...+.+|++|.+++.++++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~v~~~~~   78 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA--------LGGALLFRADVTQDEELDALFA   78 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH--------TTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc--------cCcccccccccCCHHHHHHHHH
Confidence            457899999998  799999999999999999888886543333221111        2344589999999988877653


Q ss_pred             -------CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCC
Q 044905           81 -------NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNV  136 (427)
Q Consensus        81 -------g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~  136 (427)
                             +.|++||++|....    +.           .+++|+.+...+++++...  .-.++|++||.....+     
T Consensus        79 ~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~-----  153 (256)
T d1ulua_          79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKV-----  153 (256)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSB-----
T ss_pred             HHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCC-----
Confidence                   68999999986532    11           3455666666666665432  1247888887763111     


Q ss_pred             CCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccce--EEe--cccccCCCCCcccHHH
Q 044905          137 LDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYNV--VVS--AEASVDANDYKVAKSQ  208 (427)
Q Consensus       137 ~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~i--~~~--~~~~~~~~~~~i~v~D  208 (427)
                      ......     |.-++ -+.+.+.+    .+...|+++..|.||++...........  ...  ....+..  -+...+|
T Consensus       154 ~~~~~~-----Y~asK-aal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~--R~~~ped  225 (256)
T d1ulua_         154 VPKYNV-----MAIAK-AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR--RNITQEE  225 (256)
T ss_dssp             CTTCHH-----HHHHH-HHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS--SCCCHHH
T ss_pred             CCCchH-----HHHHH-HHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC--CCcCHHH
Confidence            111122     22111 12333333    3346799999999997654221100000  000  0001111  2678999


Q ss_pred             HHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          209 IASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       209 VA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                      ||++++.++++... ..|..+.+-++
T Consensus       226 vA~~v~fL~S~~s~~itG~~i~VDGG  251 (256)
T d1ulua_         226 VGNLGLFLLSPLASGITGEVVYVDAG  251 (256)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHHhCchhCCccCCeEEECcC
Confidence            99999999874333 36788888776

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.38  E-value=1.9e-12  Score=121.30  Aligned_cols=214  Identities=13%  Similarity=0.083  Sum_probs=132.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCC-CHHHHHHHh-
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFD-SAESIAKAI-   79 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~-D~~sl~~al-   79 (427)
                      ...++|+||||++.||..++++|+++|++|+++.|+.+....+......      ....++.++.+|++ |.+.+.+++ 
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~   76 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAI------NPKVNITFHTYDVTVPVAESKKLLK   76 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHH------CTTSEEEEEECCTTSCHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhh------CCCCCEEEEEeecCCCHHHHHHHHH
Confidence            3567999999999999999999999999999999887755444322111      11235668899997 555555444 


Q ss_pred             ------cCcCEEEEccCCCCCCC---CccccHHHHHHHHHHHHHc-------CCCeEEEEecccccccccCCCCCCCCcc
Q 044905           80 ------GNAGKVVVTIGPTEDGP---TSEVSTSDAFQVIQAAQLA-------GVGHVAIIYDGNTTAASTYNVLDGISSF  143 (427)
Q Consensus        80 ------~g~d~Vi~~ag~~~~~~---~~~vn~~~~~~ll~Aa~~~-------gVk~~V~vSSs~v~~~~~~~~~~~~~~~  143 (427)
                            .++|++|++||....+.   .+++|+.++.++.+++...       ...++|++||.....+     ......|
T Consensus        77 ~~~~~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~-----~~~~~~Y  151 (254)
T d1sbya1          77 KIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA-----IHQVPVY  151 (254)
T ss_dssp             HHHHHHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC-----CTTSHHH
T ss_pred             HHHHHcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC-----CCCCHHH
Confidence                  46899999999766543   6688888888888776542       2357888887762111     1112222


Q ss_pred             chhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc-eEEeccc-ccCCCCCcccHHHHHHHHHHHh
Q 044905          144 FNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN-VVVSAEA-SVDANDYKVAKSQIASLVADVF  217 (427)
Q Consensus       144 ~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~-i~~~~~~-~~~~~~~~i~v~DVA~~v~~al  217 (427)
                      ..     ++ .+...+.    ..+...|+++..|.||++.......... ....... .........+.+++|++++.++
T Consensus       152 ~a-----sK-aal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~  225 (254)
T d1sbya1         152 SA-----SK-AAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI  225 (254)
T ss_dssp             HH-----HH-HHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHH
T ss_pred             HH-----HH-HHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhh
Confidence            22     21 1122222    2334678999999999764311000000 0000000 0001113557899999998887


Q ss_pred             cCcccccCcEEEEecCC
Q 044905          218 SNTAVAENKVVKVFTDP  234 (427)
Q Consensus       218 ~~~~~~~g~~~nI~~~~  234 (427)
                      +..  ..|.++.+-++.
T Consensus       226 ~~~--~tG~vi~vdgG~  240 (254)
T d1sbya1         226 EAN--KNGAIWKLDLGT  240 (254)
T ss_dssp             HHC--CTTCEEEEETTE
T ss_pred             hCC--CCCCEEEECCCE
Confidence            632  367888887763

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=2.4e-12  Score=120.62  Aligned_cols=211  Identities=10%  Similarity=0.074  Sum_probs=130.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLR---EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~---~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      ++.+.++|||||+.||..++++|.+   +|++|+++.|+.++++.+......     .....++..+.+|++|.+++.++
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~-----~~~~~~~~~~~~Dvs~~~~v~~l   78 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGA-----QQPDLKVVLAAADLGTEAGVQRL   78 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHH-----HCTTSEEEEEECCTTSHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHh-----hcCCceEEEEEccCCCHHHHHHH
Confidence            4556789999999999999999975   799999999998877665432111     00112566899999999988877


Q ss_pred             hc-----------CcCEEEEccCCCCC---CC-----------CccccHHHHHHHHHHHHHc----C--CCeEEEEeccc
Q 044905           79 IG-----------NAGKVVVTIGPTED---GP-----------TSEVSTSDAFQVIQAAQLA----G--VGHVAIIYDGN  127 (427)
Q Consensus        79 l~-----------g~d~Vi~~ag~~~~---~~-----------~~~vn~~~~~~ll~Aa~~~----g--Vk~~V~vSSs~  127 (427)
                      +.           ..|++|+++|....   ++           .+++|+.++..+.+++...    +  ..++|++||..
T Consensus        79 ~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~  158 (259)
T d1oaaa_          79 LSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC  158 (259)
T ss_dssp             HHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG
T ss_pred             HHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccccc
Confidence            52           35689999886432   11           4568888888888888653    2  24788888765


Q ss_pred             ccccccCCCCCCCCccchhhhhccccccHHHHHHHHh--cCCCeEEEEeCCCCCCCCCCCccce-----EEec--ccccC
Q 044905          128 TTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI--ETDVSYTFIKTSLTEDFSPESSYNV-----VVSA--EASVD  198 (427)
Q Consensus       128 v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~--~~gl~~tilRPG~~~~~~~~~~~~i-----~~~~--~~~~~  198 (427)
                      ...+     ......     |+-+| .+...+.+.+.  ..|+++..|.||++...........     ....  .....
T Consensus       159 ~~~~-----~~~~~~-----Y~asK-aal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  227 (259)
T d1oaaa_         159 ALQP-----YKGWGL-----YCAGK-AARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD  227 (259)
T ss_dssp             GTSC-----CTTCHH-----HHHHH-HHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT
T ss_pred             ccCC-----CccchH-----HHHHH-HHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC
Confidence            2111     111122     22222 22344444443  5789999999997654211000000     0000  00011


Q ss_pred             CCCCcccHHHHHHHHHHHhcCcccccCcEEEE
Q 044905          199 ANDYKVAKSQIASLVADVFSNTAVAENKVVKV  230 (427)
Q Consensus       199 ~~~~~i~v~DVA~~v~~al~~~~~~~g~~~nI  230 (427)
                      .  ...+.+|+|+.++.+++...-..|..+++
T Consensus       228 ~--r~~~p~evA~~i~~ll~~~s~~TG~~idv  257 (259)
T d1oaaa_         228 G--ALVDCGTSAQKLLGLLQKDTFQSGAHVDF  257 (259)
T ss_dssp             T--CSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred             C--CCCCHHHHHHHHHHHhhhccCCCCCeEEe
Confidence            1  25689999999998886432235666664

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=8.3e-12  Score=118.75  Aligned_cols=161  Identities=16%  Similarity=0.202  Sum_probs=105.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEE---EEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVR---AGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~---al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +.|+|||||+.||+++++.|+++|++|+   ...|+......+.......    .....++..+.+|++|.+++.+++. 
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~Dv~~~~~~~~~~~~   78 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL----ACPPGSLETLQLDVRDSKSVAAARER   78 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT----TCCTTSEEEEECCTTCHHHHHHHHHT
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHH----hccCCceEEEeccccchHhhhhhhhh
Confidence            3468999999999999999999997644   4456655443333221110    0113466789999999999988774 


Q ss_pred             ----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHH----HHcCCCeEEEEecccccccccCCCCCCCC
Q 044905           81 ----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAA----QLAGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa----~~~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ..|++|+++|....++           .+++|+.++.++++++    ++.+-.++|++||.+...+     .....
T Consensus        79 ~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~-----~~~~~  153 (285)
T d1jtva_          79 VTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMG-----LPFND  153 (285)
T ss_dssp             CTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSC-----CTTCH
T ss_pred             ccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCC-----CCCch
Confidence                4799999999766543           5567888877777665    5567789999988762111     11112


Q ss_pred             ccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCC
Q 044905          142 SFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTED  180 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~  180 (427)
                      .|..     +| .+.+.+.+    .+...|+++..|.||++..
T Consensus       154 ~Y~a-----sK-aal~~l~~~la~El~~~gIrVn~V~PG~v~T  190 (285)
T d1jtva_         154 VYCA-----SK-FALEGLCESLAVLLLPFGVHLSLIECGPVHT  190 (285)
T ss_dssp             HHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred             HHHH-----HH-HHHHHHHHHHHHHhhccCcEEEEEecCCCCC
Confidence            2222     21 12333333    3446799999999997654

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.6e-11  Score=112.49  Aligned_cols=204  Identities=13%  Similarity=0.084  Sum_probs=124.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI----   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al----   79 (427)
                      .+.++||||++.||.+++++|+++|++|+++.|+.+.++.+.....          .+......|+.+.+.+....    
T Consensus         5 GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----------~~~~~~~~~~~~~~~~~~~~~~~~   74 (248)
T d2o23a1           5 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------NNCVFAPADVTSEKDVQTALALAK   74 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------TTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------CCcccccccccccccccccccccc
Confidence            4678999999999999999999999999999999987765543221          23347888998876655443    


Q ss_pred             ---cCcCEEEEccCCCCCCC-----------------CccccHHHHHHHHHHHHHc----------CCCeEEEEeccccc
Q 044905           80 ---GNAGKVVVTIGPTEDGP-----------------TSEVSTSDAFQVIQAAQLA----------GVGHVAIIYDGNTT  129 (427)
Q Consensus        80 ---~g~d~Vi~~ag~~~~~~-----------------~~~vn~~~~~~ll~Aa~~~----------gVk~~V~vSSs~v~  129 (427)
                         ...|.++++++....+.                 .+++|+.++.++.+++...          +-.+||++||.+..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~  154 (248)
T d2o23a1          75 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF  154 (248)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHH
T ss_pred             cccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhc
Confidence               35788888765433211                 4566777788888877542          33479988877632


Q ss_pred             ccccCCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCCCccceEEec--ccccCCCCCc
Q 044905          130 AASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPESSYNVVVSA--EASVDANDYK  203 (427)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~~~~~i~~~~--~~~~~~~~~~  203 (427)
                      .+     ......|.....      +.+.+.+.    +...|+++..|.||++..........-....  ...+..+ -+
T Consensus       155 ~~-----~~~~~~Y~asKa------al~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~-R~  222 (248)
T d2o23a1         155 EG-----QVGQAAYSASKG------GIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPS-RL  222 (248)
T ss_dssp             HC-----CTTCHHHHHHHH------HHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSC-SC
T ss_pred             cC-----CCCchHHHHHHH------HHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCCC-CC
Confidence            11     111222222211      23333333    3467899999999976543221111000000  0001100 25


Q ss_pred             ccHHHHHHHHHHHhcCcccccCcEEEE
Q 044905          204 VAKSQIASLVADVFSNTAVAENKVVKV  230 (427)
Q Consensus       204 i~v~DVA~~v~~al~~~~~~~g~~~nI  230 (427)
                      ...+|||++++.++++. -..|++++|
T Consensus       223 g~peevA~~v~fL~s~~-~itGq~I~v  248 (248)
T d2o23a1         223 GDPAEYAHLVQAIIENP-FLNGEVIRL  248 (248)
T ss_dssp             BCHHHHHHHHHHHHHCT-TCCSCEEEE
T ss_pred             cCHHHHHHHHHHHHhCC-CCCceEeEC
Confidence            68999999999888742 235777664

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=6.5e-11  Score=110.08  Aligned_cols=212  Identities=13%  Similarity=0.103  Sum_probs=126.1

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .+.+++|||||+|  .||.++++.|+++|++|++..|+......+......        ..+...+..|+.+..++...+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~   74 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ--------LGSDIVLQCDVAEDASIDTMF   74 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhh--------cCCcceeecccchHHHHHHHH
Confidence            4678999999998  799999999999999999999986544333222111        234457888999987777665


Q ss_pred             c-------CcCEEEEccCCCCCCC----------------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccC
Q 044905           80 G-------NAGKVVVTIGPTEDGP----------------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTY  134 (427)
Q Consensus        80 ~-------g~d~Vi~~ag~~~~~~----------------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~  134 (427)
                      .       ..|++||+++......                ...++..+...+++++...  .-+.++++||.+....   
T Consensus        75 ~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~---  151 (258)
T d1qsga_          75 AELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---  151 (258)
T ss_dssp             HHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB---
T ss_pred             HHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC---
Confidence            3       4689999998754321                2233333444444444332  2235777776652111   


Q ss_pred             CCCCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc--eEEec--ccccCCCCCcccH
Q 044905          135 NVLDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN--VVVSA--EASVDANDYKVAK  206 (427)
Q Consensus       135 ~~~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~--i~~~~--~~~~~~~~~~i~v  206 (427)
                        ......|     +-++ -+.+.+.+    .+..+|+++..|.||++..........  .....  ...+..  -+...
T Consensus       152 --~~~~~~Y-----~~sK-aal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~--R~~~p  221 (258)
T d1qsga_         152 --IPNYNVM-----GLAK-ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR--RTVTI  221 (258)
T ss_dssp             --CTTTTHH-----HHHH-HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--SCCCH
T ss_pred             --CCCcHHH-----HHHH-HHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC--CCcCH
Confidence              1111222     2111 12333333    334678999999999765432211100  00000  011111  26789


Q ss_pred             HHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          207 SQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      +|||.+++.++++... ..|.++.+-++.
T Consensus       222 eeia~~v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         222 EDVGNSAAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHhCchhcCccCceEEECcCH
Confidence            9999999999874333 467888887773

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=8.9e-11  Score=110.39  Aligned_cols=191  Identities=14%  Similarity=0.131  Sum_probs=121.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh---
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI---   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al---   79 (427)
                      +.++++|||||+.||.++++.|+++|++|+++.|+.++++++......      ....+...+.+|+.+.+.+...+   
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~   86 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE------LGAASAHYIAGTMEDMTFAEQFVAQA   86 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH------HTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhh------hhcccchhhhhhhhhHHHHHHHHHHH
Confidence            347899999999999999999999999999999999877666443211      11234557888999877665543   


Q ss_pred             ----cCcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHH---cCCCeEEEEecccccccccCCCCCCCC
Q 044905           80 ----GNAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQL---AGVGHVAIIYDGNTTAASTYNVLDGIS  141 (427)
Q Consensus        80 ----~g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~---~gVk~~V~vSSs~v~~~~~~~~~~~~~  141 (427)
                          ...|++++++|......           .+++|+.++..+.+++..   .+-.++|++||.+...+     .....
T Consensus        87 ~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~-----~p~~~  161 (269)
T d1xu9a_          87 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA-----YPMVA  161 (269)
T ss_dssp             HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC-----CTTCH
T ss_pred             HHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCC-----CCCch
Confidence                46899999998765432           456677777776665532   22368999988762111     11122


Q ss_pred             ccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHHH
Q 044905          142 SFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVAD  215 (427)
Q Consensus       142 ~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~~  215 (427)
                      .|.     .++ .+.+.+.+.++      ..++++..+.||+++....   ... ..+  ..  ....++.+++|+.++.
T Consensus       162 ~Y~-----asK-aal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~---~~~-~~~--~~--~~~~~~~e~~a~~i~~  227 (269)
T d1xu9a_         162 AYS-----ASK-FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA---MKA-VSG--IV--HMQAAPKEECALEIIK  227 (269)
T ss_dssp             HHH-----HHH-HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH---HHH-SCG--GG--GGGCBCHHHHHHHHHH
T ss_pred             HHH-----HHH-HHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH---HHh-ccC--Cc--cccCCCHHHHHHHHHH
Confidence            222     222 22333333332      3468899999998765211   110 111  11  1135678999998887


Q ss_pred             Hhc
Q 044905          216 VFS  218 (427)
Q Consensus       216 al~  218 (427)
                      .+.
T Consensus       228 ~~~  230 (269)
T d1xu9a_         228 GGA  230 (269)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            654

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.5e-10  Score=108.96  Aligned_cols=116  Identities=16%  Similarity=0.052  Sum_probs=87.9

Q ss_pred             CEE-EEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc--
Q 044905            5 GTV-FVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG--   80 (427)
Q Consensus         5 ~kI-lItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~--   80 (427)
                      ++| +||||++.||..+++.|+++ |++|++..|+.++++........       ...++.++.+|++|.+++.++++  
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~-------~~~~~~~~~~Dvs~~~sv~~~~~~~   75 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-------EGLSPRFHQLDIDDLQSIRALRDFL   75 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-------TTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh-------cCCcEEEEEEecCCHHHHHHHHHHH
Confidence            344 89999999999999999986 89999999999876554432211       12356789999999988876653  


Q ss_pred             -----CcCEEEEccCCCCCCC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEeccc
Q 044905           81 -----NAGKVVVTIGPTEDGP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGN  127 (427)
Q Consensus        81 -----g~d~Vi~~ag~~~~~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~  127 (427)
                           ..|++|||||......           .+++|+.++..+++++...  .-.++|.+||.+
T Consensus        76 ~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~  140 (275)
T d1wmaa1          76 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM  140 (275)
T ss_dssp             HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred             HHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence                 6899999999765432           4567888888888887542  124789998764

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.20  E-value=2e-11  Score=112.52  Aligned_cols=194  Identities=14%  Similarity=0.101  Sum_probs=119.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH-------
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA-------   76 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~-------   76 (427)
                      ..+|+||||||.||+++++.|+++|++|++++|+......                 ....+.+|..+.+...       
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~   64 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD-----------------SNILVDGNKNWTEQEQSILEQTA   64 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS-----------------EEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc-----------------ccceeccccCchhHHHHHHHHHH
Confidence            4589999999999999999999999999999998753110                 0113445555433322       


Q ss_pred             HHh--cCcCEEEEccCCCCCC-C-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCCC
Q 044905           77 KAI--GNAGKVVVTIGPTEDG-P-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDGI  140 (427)
Q Consensus        77 ~al--~g~d~Vi~~ag~~~~~-~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~~  140 (427)
                      ..+  ...|++||++|....+ +           .+++|+.++..+++++...  .-.++|++||.+...        +.
T Consensus        65 ~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~--------~~  136 (235)
T d1ooea_          65 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG--------PT  136 (235)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS--------CC
T ss_pred             HHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcC--------Cc
Confidence            222  3489999999964331 1           4677777887777777653  225788888765211        11


Q ss_pred             CccchhhhhccccccHHHHHHHHh-c-----CCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHHH
Q 044905          141 SSFFNNLFSRNQPLTVPEFLQKVI-E-----TDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLVA  214 (427)
Q Consensus       141 ~~~~~~~~~k~~~l~~E~~l~~l~-~-----~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v~  214 (427)
                      +.+  ..|+.+| .+.+.+.+.+. +     .++++..+.||+++....   ... .  +....  ..+++.+|+++.++
T Consensus       137 ~~~--~~Y~asK-aal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~---~~~-~--~~~~~--~~~~~~~~va~~~~  205 (235)
T d1ooea_         137 PSM--IGYGMAK-AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN---RKW-M--PNADH--SSWTPLSFISEHLL  205 (235)
T ss_dssp             TTB--HHHHHHH-HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH---HHH-S--TTCCG--GGCBCHHHHHHHHH
T ss_pred             ccc--cchHHHH-HHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcch---hhh-C--cCCcc--ccCCCHHHHHHHHH
Confidence            111  1233222 33556666654 2     367888899998765211   111 0  11111  14789999999987


Q ss_pred             HHhcCcc-c-ccCcEEEEecC
Q 044905          215 DVFSNTA-V-AENKVVKVFTD  233 (427)
Q Consensus       215 ~al~~~~-~-~~g~~~nI~~~  233 (427)
                      ..+..+. . ..|..+.+.+.
T Consensus       206 ~~l~~~~~~~~tG~~i~v~~~  226 (235)
T d1ooea_         206 KWTTETSSRPSSGALLKITTE  226 (235)
T ss_dssp             HHHHCGGGCCCTTCEEEEEEE
T ss_pred             HHhcCccccCCCceEEEEEee
Confidence            6554432 2 35777777443

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.20  E-value=2.5e-11  Score=112.03  Aligned_cols=194  Identities=11%  Similarity=0.046  Sum_probs=119.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH-----
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK-----   77 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~-----   77 (427)
                      +.|+|+||||||.||+++++.|+++|++|.+++|+.....                 .....+..|..+.+....     
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~   63 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------SASVIVKMTDSFTEQADQVTAEV   63 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------SEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------cccceeecccCcHHHHHHHHHHH
Confidence            4689999999999999999999999999999988764311                 000133444444333322     


Q ss_pred             --Hhc--CcCEEEEccCCCCC-CC-----------CccccHHHHHHHHHHHHHc--CCCeEEEEecccccccccCCCCCC
Q 044905           78 --AIG--NAGKVVVTIGPTED-GP-----------TSEVSTSDAFQVIQAAQLA--GVGHVAIIYDGNTTAASTYNVLDG  139 (427)
Q Consensus        78 --al~--g~d~Vi~~ag~~~~-~~-----------~~~vn~~~~~~ll~Aa~~~--gVk~~V~vSSs~v~~~~~~~~~~~  139 (427)
                        .+.  ++|++||++|.... ..           .+++|+.++.++.+++...  .-.++|++||.+...        +
T Consensus        64 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~--------~  135 (236)
T d1dhra_          64 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD--------G  135 (236)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS--------C
T ss_pred             HHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcC--------C
Confidence              222  48999999985332 11           4567777888877777653  235799998776211        1


Q ss_pred             CCccchhhhhccccccHHHHHHHHh------cCCCeEEEEeCCCCCCCCCCCccceEEecccccCCCCCcccHHHHHHHH
Q 044905          140 ISSFFNNLFSRNQPLTVPEFLQKVI------ETDVSYTFIKTSLTEDFSPESSYNVVVSAEASVDANDYKVAKSQIASLV  213 (427)
Q Consensus       140 ~~~~~~~~~~k~~~l~~E~~l~~l~------~~gl~~tilRPG~~~~~~~~~~~~i~~~~~~~~~~~~~~i~v~DVA~~v  213 (427)
                      .+.+  ..|+-+| -+.+.+.+.+.      ..|+++..|.||+++....   ..   ..+....  ..++..+++|+.+
T Consensus       136 ~~~~--~~Y~asK-aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~---~~---~~~~~~~--~~~~~pe~va~~~  204 (236)
T d1dhra_         136 TPGM--IGYGMAK-GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN---RK---SMPEADF--SSWTPLEFLVETF  204 (236)
T ss_dssp             CTTB--HHHHHHH-HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH---HH---HSTTSCG--GGSEEHHHHHHHH
T ss_pred             ccCC--cccHHHH-HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcc---hh---hCccchh--hcCCCHHHHHHHH
Confidence            1111  1233222 23566666665      2479999999997754211   00   0011111  1478899999999


Q ss_pred             HHHhcCccc-ccCcEEEEec
Q 044905          214 ADVFSNTAV-AENKVVKVFT  232 (427)
Q Consensus       214 ~~al~~~~~-~~g~~~nI~~  232 (427)
                      ..+++.... ..|..+.+.+
T Consensus       205 ~~l~s~~~~~i~G~~i~v~~  224 (236)
T d1dhra_         205 HDWITGNKRPNSGSLIQVVT  224 (236)
T ss_dssp             HHHHTTTTCCCTTCEEEEEE
T ss_pred             HHHhCCCccCCCCCeEEEEE
Confidence            998875332 3566666643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.17  E-value=4e-10  Score=105.57  Aligned_cols=212  Identities=9%  Similarity=0.082  Sum_probs=118.7

Q ss_pred             CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            2 KDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         2 ~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      .+.+++|||||+|  .||.++++.|+++|++|++..|+....+.+......        .....++..|+++.+++.+++
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~--------~~~~~~~~~d~~~~~~~~~~~   74 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE--------LNSPYVYELDVSKEEHFKSLY   74 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH--------TTCCCEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--------CCceeEeeecccchhhHHHHH
Confidence            4678999999987  799999999999999999999986532222221111        123357899999988777766


Q ss_pred             -------cCcCEEEEccCCCCCC----CCccccHH-----------HHHHHHHHHHHc-CCCeEEEE-ecccccccccCC
Q 044905           80 -------GNAGKVVVTIGPTEDG----PTSEVSTS-----------DAFQVIQAAQLA-GVGHVAII-YDGNTTAASTYN  135 (427)
Q Consensus        80 -------~g~d~Vi~~ag~~~~~----~~~~vn~~-----------~~~~ll~Aa~~~-gVk~~V~v-SSs~v~~~~~~~  135 (427)
                             ..+|++||++|.....    ........           ....+...+... +-..++++ |+.+..     .
T Consensus        75 ~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~-----~  149 (274)
T d2pd4a1          75 NSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST-----K  149 (274)
T ss_dssp             HHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----S
T ss_pred             HHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccc-----c
Confidence                   4689999999976431    11111111           111222222211 22233433 333311     1


Q ss_pred             CCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccc--eEEe--cccccCCCCCcccHH
Q 044905          136 VLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYN--VVVS--AEASVDANDYKVAKS  207 (427)
Q Consensus       136 ~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~--i~~~--~~~~~~~~~~~i~v~  207 (427)
                      ......     .|+-.+ .+.+.+.    ..+...|+++..|.||++..........  ....  ....+..  .+...+
T Consensus       150 ~~~~~~-----~y~asK-~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~--r~~~pe  221 (274)
T d2pd4a1         150 YMAHYN-----VMGLAK-AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLR--KNVSLE  221 (274)
T ss_dssp             BCTTCH-----HHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS--SCCCHH
T ss_pred             ccccch-----hhhHHH-HHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhcc--CCcCHH
Confidence            111111     122111 1223332    3344789999999999665432211100  0000  0011111  367999


Q ss_pred             HHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          208 QIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       208 DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      |||.+++.++++... ..|.++.+-++.
T Consensus       222 dIA~~v~fL~S~~s~~itG~~i~vDGG~  249 (274)
T d2pd4a1         222 EVGNAGMYLLSSLSSGVSGEVHFVDAGY  249 (274)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHhChhhCCCcCceEEECCCh
Confidence            999999999875333 367788887773

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.12  E-value=1.2e-09  Score=102.57  Aligned_cols=216  Identities=14%  Similarity=0.072  Sum_probs=116.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc-hHHHHHHHH----hhhhhh---hhh----hhccceEEEecCCC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG-AAQELARLA----ASYKIL---SKE----ELKRLNAVESNFDS   71 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~-~~~~l~~~~----~~~~~~---~~~----~~~rl~vv~gDl~D   71 (427)
                      ++.++||||++.||+++++.|+++|++|++..|+.. ..+.+....    ....+.   +..    .........+|+++
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence            457899999999999999999999999998877654 333332211    100000   000    00011224456888


Q ss_pred             HHHHHHHh-------cCcCEEEEccCCCCCCCC-------------------------ccccHHHHHHHHHHHHH-----
Q 044905           72 AESIAKAI-------GNAGKVVVTIGPTEDGPT-------------------------SEVSTSDAFQVIQAAQL-----  114 (427)
Q Consensus        72 ~~sl~~al-------~g~d~Vi~~ag~~~~~~~-------------------------~~vn~~~~~~ll~Aa~~-----  114 (427)
                      .+.+.+++       .++|++||++|.....+.                         +.+|+.+...+.+++..     
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            87777765       478999999997654331                         23344444445554332     


Q ss_pred             -----cCCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCC
Q 044905          115 -----AGVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPES  185 (427)
Q Consensus       115 -----~gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~  185 (427)
                           .+...++.++|...  .   ....+...|..     .| .+...+.    ..+...|+++..|.||++.....  
T Consensus       162 ~~~~~~~~~~ii~~~s~~~--~---~~~~~~~~Y~a-----sK-aal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~--  228 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMT--N---QPLLGYTIYTM-----AK-GALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD--  228 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTT--T---SCCTTCHHHHH-----HH-HHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG--
T ss_pred             HHHhcCCCCcccccccccc--c---CCccceeeecc-----cc-ccchhhhHHHHHHhCCcccccccccccccccccc--
Confidence                 12234554444431  1   11111222221     11 1223333    33446799999999996432111  


Q ss_pred             ccceEEec--cccc-CCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          186 SYNVVVSA--EASV-DANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       186 ~~~i~~~~--~~~~-~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ...-....  ...+ ..  -+...+|||++++.++++... ..|..+.+-++.
T Consensus       229 ~~~~~~~~~~~~~pl~~--R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~  279 (284)
T d1e7wa_         229 MPPAVWEGHRSKVPLYQ--RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY  279 (284)
T ss_dssp             SCHHHHHHHHTTCTTTT--SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCHHHHHHHHhcCCCCC--CCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence            00000000  0111 11  256899999999999874333 367888888774

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.10  E-value=1.6e-10  Score=105.95  Aligned_cols=197  Identities=17%  Similarity=0.150  Sum_probs=117.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc----
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG----   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~----   80 (427)
                      |+++|||||+.||+++++.|+++|++|++..|+.+..+                   +..+.+|+.+......+..    
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-------------------~~~~~~d~~~~~~~~~~~~~~~~   62 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED-------------------LIYVEGDVTREEDVRRAVARAQE   62 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSS-------------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccccc-------------------ceEeeccccchhhhHHHHHhhhc
Confidence            68999999999999999999999999999999875321                   2367899998766665543    


Q ss_pred             --CcCEEEEccCCCCC----CC-----------CccccHHHHHHHHHHHHHc----------CCCeEEEEeccccccccc
Q 044905           81 --NAGKVVVTIGPTED----GP-----------TSEVSTSDAFQVIQAAQLA----------GVGHVAIIYDGNTTAAST  133 (427)
Q Consensus        81 --g~d~Vi~~ag~~~~----~~-----------~~~vn~~~~~~ll~Aa~~~----------gVk~~V~vSSs~v~~~~~  133 (427)
                        ..+.++++++....    +.           .+++|..+...++..+...          +-.++|++||.....+. 
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~-  141 (241)
T d1uaya_          63 EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ-  141 (241)
T ss_dssp             HSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC-
T ss_pred             cccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC-
Confidence              23445554443221    11           3355555555555554332          34589999877632111 


Q ss_pred             CCCCCCCCccchhhhhccccccHHHHHH----HHhcCCCeEEEEeCCCCCCCCCCCccc-eE--EecccccCCCCCcccH
Q 044905          134 YNVLDGISSFFNNLFSRNQPLTVPEFLQ----KVIETDVSYTFIKTSLTEDFSPESSYN-VV--VSAEASVDANDYKVAK  206 (427)
Q Consensus       134 ~~~~~~~~~~~~~~~~k~~~l~~E~~l~----~l~~~gl~~tilRPG~~~~~~~~~~~~-i~--~~~~~~~~~~~~~i~v  206 (427)
                          .....|.     -.| -+.+.+.+    .+...|+++..|.||++.......... ..  .........  -+...
T Consensus       142 ----~~~~~Y~-----asK-aal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--R~g~p  209 (241)
T d1uaya_         142 ----IGQAAYA-----ASK-GGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPP--RLGRP  209 (241)
T ss_dssp             ----TTCHHHH-----HHH-HHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSC--SCCCH
T ss_pred             ----CCchhhH-----HHH-HHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCC--CCcCH
Confidence                1112222     211 12333333    334679999999999765321100000 00  000001111  25689


Q ss_pred             HHHHHHHHHHhcCcccccCcEEEEecCC
Q 044905          207 SQIASLVADVFSNTAVAENKVVKVFTDP  234 (427)
Q Consensus       207 ~DVA~~v~~al~~~~~~~g~~~nI~~~~  234 (427)
                      +|||.+++.+++.. -..|.++.+-++.
T Consensus       210 edvA~~v~fL~s~~-~iTG~~i~VDGG~  236 (241)
T d1uaya_         210 EEYAALVLHILENP-MLNGEVVRLDGAL  236 (241)
T ss_dssp             HHHHHHHHHHHHCT-TCCSCEEEESTTC
T ss_pred             HHHHHHHHHHHhCC-CCCCCEEEECCcc
Confidence            99999999988742 3478899988774

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.09  E-value=2.7e-09  Score=98.89  Aligned_cols=211  Identities=15%  Similarity=0.106  Sum_probs=110.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCC----HHHHH---
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDS----AESIA---   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D----~~sl~---   76 (427)
                      +..+|||||+.||..++++|+++|++|+++.|+.++. +.+......      ....+...+..|+.+    .+.+.   
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA------ARAGSAVLCKGDLSLSSSLLDCCEDII   75 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH------HSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHh------hcCCceEEEecccccchhHHHHHHHHH
Confidence            4789999999999999999999999999999997643 333221111      111233345555443    33333   


Q ss_pred             ----HHhcCcCEEEEccCCCCCCCCc-----------c-----------ccHHHHHHHHHHHHHc---------CCCeEE
Q 044905           77 ----KAIGNAGKVVVTIGPTEDGPTS-----------E-----------VSTSDAFQVIQAAQLA---------GVGHVA  121 (427)
Q Consensus        77 ----~al~g~d~Vi~~ag~~~~~~~~-----------~-----------vn~~~~~~ll~Aa~~~---------gVk~~V  121 (427)
                          +.+.++|++||++|.....+..           +           .+..........+...         ....++
T Consensus        76 ~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (266)
T d1mxha_          76 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  155 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccch
Confidence                3345799999999976543210           0           1111111111111111         112333


Q ss_pred             EEecccccccccCCCCCCCCccchhhhhccccccHHHHH----HHHhcCCCeEEEEeCCCCCCCCCCCccceEEe-cccc
Q 044905          122 IIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFL----QKVIETDVSYTFIKTSLTEDFSPESSYNVVVS-AEAS  196 (427)
Q Consensus       122 ~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l----~~l~~~gl~~tilRPG~~~~~~~~~~~~i~~~-~~~~  196 (427)
                      .+++...     .........|..   +|.   +.+.+.    ..+...|+++..|.||++....... ...... ....
T Consensus       156 ~~~~~~~-----~~~~~~~~~Y~a---sKa---al~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-~~~~~~~~~~~  223 (266)
T d1mxha_         156 NLCDAMT-----DLPLPGFCVYTM---AKH---ALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-QETQEEYRRKV  223 (266)
T ss_dssp             EECCGGG-----GSCCTTCHHHHH---HHH---HHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-HHHHHHHHTTC
T ss_pred             hhhhccc-----cccCcchhhhhh---hHH---HHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-HHHHHHHHhcC
Confidence            3333321     111111222221   111   133333    3344678999999999765321100 000000 0111


Q ss_pred             cCCCCCcccHHHHHHHHHHHhcCcccc-cCcEEEEecCC
Q 044905          197 VDANDYKVAKSQIASLVADVFSNTAVA-ENKVVKVFTDP  234 (427)
Q Consensus       197 ~~~~~~~i~v~DVA~~v~~al~~~~~~-~g~~~nI~~~~  234 (427)
                      +..+ -+.+.+|||++++.++++...+ .|.++.+-++.
T Consensus       224 pl~r-~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         224 PLGQ-SEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             TTTS-CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCC-CCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence            1111 1358999999999999754333 67888887773

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.05  E-value=3.2e-10  Score=101.11  Aligned_cols=82  Identities=24%  Similarity=0.172  Sum_probs=69.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+||||+|.||+.+++.|+++|++|+++.|+.++...+......        ..++.+..+|+.|.+.+.++++++
T Consensus        22 ~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~i   93 (191)
T d1luaa1          22 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK--------RFKVNVTAAETADDASRAEAVKGA   93 (191)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH--------HHTCCCEEEECCSHHHHHHHTTTC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHh--------ccchhhhhhhcccHHHHHHHhcCc
Confidence            467999999999999999999999999999999999877665443222        234458899999999999999999


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+|||++|..
T Consensus        94 Dilin~Ag~g  103 (191)
T d1luaa1          94 HFVFTAGAIG  103 (191)
T ss_dssp             SEEEECCCTT
T ss_pred             CeeeecCccc
Confidence            9999999863

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.00  E-value=1.6e-09  Score=100.85  Aligned_cols=213  Identities=12%  Similarity=0.076  Sum_probs=116.4

Q ss_pred             CCCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchH-HHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            1 RKDSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAA-QELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         1 ~~~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~-~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      ++..++++||||+|  .||.+++++|+++|++|++..|+..+. +.+....          ..+...+.+|++|.+++..
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~----------~~~~~~~~~dv~~~~~~~~   72 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL----------PAKAPLLELDVQNEEHLAS   72 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS----------SSCCCEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc----------CCceeeEeeeccccccccc
Confidence            36778999999765  599999999999999999999987654 2232210          2344588999999866555


Q ss_pred             Hhc----------CcCEEEEccCCCCCC-----CCccccHH-----------HHHHHHHHHHHcC-CCeEEEEecccccc
Q 044905           78 AIG----------NAGKVVVTIGPTEDG-----PTSEVSTS-----------DAFQVIQAAQLAG-VGHVAIIYDGNTTA  130 (427)
Q Consensus        78 al~----------g~d~Vi~~ag~~~~~-----~~~~vn~~-----------~~~~ll~Aa~~~g-Vk~~V~vSSs~v~~  130 (427)
                      +++          ..|+++|++|.....     +..+....           .....+.++.... -..+++++|++.. 
T Consensus        73 ~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~-  151 (268)
T d2h7ma1          73 LAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-  151 (268)
T ss_dssp             HHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-
T ss_pred             ccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccccccc-
Confidence            432          368999999965421     11222222           2222222222221 1233333333311 


Q ss_pred             cccCCCCCCCCccchhhhhccccccHHHHHHH----HhcCCCeEEEEeCCCCCCCCCC----Cccce---E-Eec---cc
Q 044905          131 ASTYNVLDGISSFFNNLFSRNQPLTVPEFLQK----VIETDVSYTFIKTSLTEDFSPE----SSYNV---V-VSA---EA  195 (427)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~----l~~~gl~~tilRPG~~~~~~~~----~~~~i---~-~~~---~~  195 (427)
                       ..      .+.+.  .|+-.+ .+.+.+.+.    +...|+++..|.||++......    .....   . ...   ..
T Consensus       152 -~~------~p~~~--~y~~sK-~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (268)
T d2h7ma1         152 -RA------MPAYN--WMTVAK-SALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW  221 (268)
T ss_dssp             -SC------CTTTH--HHHHHH-HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred             -cc------Ccccc--hhhccc-cchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHH
Confidence             10      11111  121111 123343333    3467899999999966431100    00000   0 000   00


Q ss_pred             ccCCCC--CcccHHHHHHHHHHHhcCcccc-cCcEEEEecCC
Q 044905          196 SVDAND--YKVAKSQIASLVADVFSNTAVA-ENKVVKVFTDP  234 (427)
Q Consensus       196 ~~~~~~--~~i~v~DVA~~v~~al~~~~~~-~g~~~nI~~~~  234 (427)
                      ....++  .+.+.+|||++++.++++...+ .|.++.+-++.
T Consensus       222 ~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~  263 (268)
T d2h7ma1         222 DQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA  263 (268)
T ss_dssp             HHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCc
Confidence            000111  2668999999999998753333 67778887774

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.90  E-value=3.9e-08  Score=90.45  Aligned_cols=202  Identities=14%  Similarity=0.077  Sum_probs=106.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-----
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-----   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-----   78 (427)
                      |+.|+||||+|.||+++++.|+++|++|++++|+...                        ...|+.+.+.....     
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------~~~d~~~~~~~~~~~~~~~   56 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------VIADLSTAEGRKQAIADVL   56 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------EECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------HHHHhcCHHHHHHHHHHHH
Confidence            6788999999999999999999999999999987542                        22344443333222     


Q ss_pred             ---hcCcCEEEEccCCCCCCC----CccccHHHHHHHHHH----HHHcCCCeEEEEecccccccccCCCC----------
Q 044905           79 ---IGNAGKVVVTIGPTEDGP----TSEVSTSDAFQVIQA----AQLAGVGHVAIIYDGNTTAASTYNVL----------  137 (427)
Q Consensus        79 ---l~g~d~Vi~~ag~~~~~~----~~~vn~~~~~~ll~A----a~~~gVk~~V~vSSs~v~~~~~~~~~----------  137 (427)
                         ....|++++++|......    ...+|..+...+.+.    ...........+++............          
T Consensus        57 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          57 AKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             TTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             HHhCCCCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence               235899999998755432    122333344444333    23334444544443321110000000          


Q ss_pred             ---------CCCCccchhhhhccccccHHHHHHHH----hcCCCeEEEEeCCCCCCCCCCCc-cc--eE--EecccccCC
Q 044905          138 ---------DGISSFFNNLFSRNQPLTVPEFLQKV----IETDVSYTFIKTSLTEDFSPESS-YN--VV--VSAEASVDA  199 (427)
Q Consensus       138 ---------~~~~~~~~~~~~k~~~l~~E~~l~~l----~~~gl~~tilRPG~~~~~~~~~~-~~--i~--~~~~~~~~~  199 (427)
                               .+.. .....|+-+| -+.+.+.+.+    ...|+++..|.||++........ ..  ..  ......+..
T Consensus       137 ~~i~s~~~~~~~~-~~~~~Y~asK-aal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Plg  214 (257)
T d1fjha_         137 AKARAIVEHAGEQ-GGNLAYAGSK-NALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMG  214 (257)
T ss_dssp             HHHHHHHHTCCTT-HHHHHHHHHH-HHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTT
T ss_pred             EEEeeehhccCCC-cchHHHHHHh-hhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCC
Confidence                     0000 0111233222 2234443333    36799999999996643211100 00  00  000011111


Q ss_pred             CCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecC
Q 044905          200 NDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTD  233 (427)
Q Consensus       200 ~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~  233 (427)
                        -+.+.+|||.++..+++.... ..|..+.+-++
T Consensus       215 --R~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         215 --RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             --SCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence              256899999999999874333 36788888776

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.81  E-value=3.1e-08  Score=93.23  Aligned_cols=224  Identities=10%  Similarity=0.043  Sum_probs=114.7

Q ss_pred             CCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH---Hhhh-hhhhhh---hhccceEEEe------
Q 044905            3 DSGTVFVAGATG--QAGVRIAQTLLREGFSVRAGVPELGAAQELARL---AASY-KILSKE---ELKRLNAVES------   67 (427)
Q Consensus         3 ~~~kIlItGATG--~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~---~~~~-~~~~~~---~~~rl~vv~g------   67 (427)
                      ..++++||||+|  .||..+++.|+++|++|++..|++.........   .... .+....   +..++..+..      
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE   86 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccc
Confidence            457999999987  899999999999999999998876432111110   0000 000000   0001111111      


Q ss_pred             ---------------cCCCH----HHHHHHhcCcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHHHHc
Q 044905           68 ---------------NFDSA----ESIAKAIGNAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAAQLA  115 (427)
Q Consensus        68 ---------------Dl~D~----~sl~~al~g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa~~~  115 (427)
                                     |..+.    +.+.+.+.++|++||++|....  .+           .+++|+.+...+++++...
T Consensus        87 ~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~  166 (297)
T d1d7oa_          87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI  166 (297)
T ss_dssp             GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             cchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHH
Confidence                           11222    2333445689999999986432  22           3345666666667766543


Q ss_pred             CC--CeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh-cCCCeEEEEeCCCCCCCCCCCccc---e
Q 044905          116 GV--GHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI-ETDVSYTFIKTSLTEDFSPESSYN---V  189 (427)
Q Consensus       116 gV--k~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~-~~gl~~tilRPG~~~~~~~~~~~~---i  189 (427)
                      ..  .+++.+++++.....    ......|.....+-.  .....+...+. +.|+++..|.||++..........   .
T Consensus       167 ~~~~g~~~~~~~~~~~~~~----~~~~~~y~~aKaa~~--~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~  240 (297)
T d1d7oa_         167 MNPGGASISLTYIASERII----PGYGGGMSSAKAALE--SDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM  240 (297)
T ss_dssp             EEEEEEEEEEECGGGTSCC----TTCTTTHHHHHHHHH--HHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred             hhcCCcceeeeehhhcccc----cccccceeccccccc--ccccccchhccccceEEecccccccccchhhhhccCCHHH
Confidence            21  234555544421111    011111221110000  00112223332 468999999999665432211000   0


Q ss_pred             EEe-cccccCCCCCcccHHHHHHHHHHHhcCccc-ccCcEEEEecCC
Q 044905          190 VVS-AEASVDANDYKVAKSQIASLVADVFSNTAV-AENKVVKVFTDP  234 (427)
Q Consensus       190 ~~~-~~~~~~~~~~~i~v~DVA~~v~~al~~~~~-~~g~~~nI~~~~  234 (427)
                      ... ....+..  -+...+|||.+++.++++... ..|.++.+-++.
T Consensus       241 ~~~~~~~~Plg--R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         241 IEYSYNNAPIQ--KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             HHHHHHHSSSC--CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHhCCCCC--CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence            000 0011111  267899999999999875333 367888887763

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.66  E-value=8.6e-08  Score=79.73  Aligned_cols=94  Identities=16%  Similarity=0.239  Sum_probs=74.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      |+|+|+|+ |.+|++|++.|.+.|++|+++.++++....+....            .+.++.||.+|++.|.++ ++.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~------------~~~vi~Gd~~~~~~l~~~~i~~a~   67 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------------DALVINGDCTKIKTLEDAGIEDAD   67 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------------SSEEEESCTTSHHHHHHTTTTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh------------hhhhccCcccchhhhhhcChhhhh
Confidence            79999998 99999999999999999999999998777664421            224899999999999988 67899


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .++.+...      .+.|    .-+...++..|++++|
T Consensus        68 ~vv~~t~~------d~~N----~~~~~~~k~~~~~~iI   95 (132)
T d1lssa_          68 MYIAVTGK------EEVN----LMSSLLAKSYGINKTI   95 (132)
T ss_dssp             EEEECCSC------HHHH----HHHHHHHHHTTCCCEE
T ss_pred             hhcccCCc------HHHH----HHHHHHHHHcCCceEE
Confidence            99876542      2334    2245566778888776

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=98.53  E-value=5.6e-07  Score=86.23  Aligned_cols=167  Identities=10%  Similarity=0.099  Sum_probs=89.7

Q ss_pred             CCEEEEEc--CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHh-hh--hhhhhhh--hccceEEEe---------
Q 044905            4 SGTVFVAG--ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAA-SY--KILSKEE--LKRLNAVES---------   67 (427)
Q Consensus         4 ~~kIlItG--ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~-~~--~~~~~~~--~~rl~vv~g---------   67 (427)
                      .+..||||  ++..||..|++.|+++|++|.+..|+............ .+  ..+....  ........+         
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            46789999  55689999999999999999998887764332221110 00  0000000  001112222         


Q ss_pred             -----------cCCCHH-------HHHHHhcCcCEEEEccCCCCC--CC-----------CccccHHHHHHHHHHHHHc-
Q 044905           68 -----------NFDSAE-------SIAKAIGNAGKVVVTIGPTED--GP-----------TSEVSTSDAFQVIQAAQLA-  115 (427)
Q Consensus        68 -----------Dl~D~~-------sl~~al~g~d~Vi~~ag~~~~--~~-----------~~~vn~~~~~~ll~Aa~~~-  115 (427)
                                 |+.|.+       .+.+.+.++|++||++|....  .+           .+++|+.+...+++++... 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                       333422       223345679999999986542  22           3344545555666666543 


Q ss_pred             -CCCeEEEEecccccccccCCCCCCCCccchhhhhccccccHHHHHHHHh-----cCCCeEEEEeCCCCCC
Q 044905          116 -GVGHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVI-----ETDVSYTFIKTSLTED  180 (427)
Q Consensus       116 -gVk~~V~vSSs~v~~~~~~~~~~~~~~~~~~~~~k~~~l~~E~~l~~l~-----~~gl~~tilRPG~~~~  180 (427)
                       .-.++|.+||.+...        +.+.|. ..|+-.| -+.+.+.+.+.     +.|+++..|.||++..
T Consensus       162 ~~~GsIv~iss~~~~~--------~~p~y~-~~y~asK-aal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T  222 (329)
T d1uh5a_         162 KPQSSIISLTYHASQK--------VVPGYG-GGMSSAK-AALESDTRVLAYHLGRNYNIRINTISAGPLKS  222 (329)
T ss_dssp             EEEEEEEEEECGGGTS--------CCTTCT-TTHHHHH-HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred             ccccccccceeehhcc--------cccccc-hhhhhhh-ccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence             234688787665211        111111 1222111 12333333332     3599999999996643

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.32  E-value=8.5e-07  Score=73.37  Aligned_cols=94  Identities=23%  Similarity=0.194  Sum_probs=71.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      ++++|.|+ |.+|+++++.|.+.|++|+++..+++..+.+...+.             .++.+|.+|++.|.++ +..+|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~-------------~~~~gd~~~~~~l~~a~i~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT-------------HAVIANATEENELLSLGIRNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCS-------------EEEECCTTCTTHHHHHTGGGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCC-------------cceeeecccchhhhccCCcccc
Confidence            46899987 999999999999999999999999987776654443             3789999999999887 78899


Q ss_pred             EEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           84 KVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        84 ~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .||.+.+..     ...+    .-+...++..+..+++
T Consensus        67 ~vi~~~~~~-----~~~~----~~~~~~~~~~~~~~ii   95 (134)
T d2hmva1          67 YVIVAIGAN-----IQAS----TLTTLLLKELDIPNIW   95 (134)
T ss_dssp             EEEECCCSC-----HHHH----HHHHHHHHHTTCSEEE
T ss_pred             EEEEEcCch-----HHhH----HHHHHHHHHcCCCcEE
Confidence            998877532     1111    2233444556777765

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.03  E-value=1.1e-05  Score=68.91  Aligned_cols=75  Identities=15%  Similarity=0.248  Sum_probs=60.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|+|.|| |++|+++++.|.++||+|+++.|+.+++..+....           ........+..+...+...+...|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~-----------~~~~~~~~~~~~~~~~~~~i~~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----------QHSTPISLDVNDDAALDAEVAKHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC-----------TTEEEEECCTTCHHHHHHHHTTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc-----------cccccccccccchhhhHhhhhccc
Confidence            579999998 99999999999999999999999999887775422           222345567777788888888889


Q ss_pred             EEEEccC
Q 044905           84 KVVVTIG   90 (427)
Q Consensus        84 ~Vi~~ag   90 (427)
                      .++.+..
T Consensus        70 ~~i~~~~   76 (182)
T d1e5qa1          70 LVISLIP   76 (182)
T ss_dssp             EEEECSC
T ss_pred             eeEeecc
Confidence            8887653

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.97  E-value=2.2e-05  Score=65.94  Aligned_cols=109  Identities=14%  Similarity=0.112  Sum_probs=73.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .||.|+||+|++|++++..|..+|  -+++.++.+..+...+ +..         +..-+.....-+ ......++++++
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~---------~~~~~~~~~~~~-~~~~~~~~~~~a   69 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLS---------HIETRATVKGYL-GPEQLPDCLKGC   69 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHT---------TSSSSCEEEEEE-SGGGHHHHHTTC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHh---------hhhhhcCCCeEE-cCCChHHHhCCC
Confidence            389999999999999999999988  4789888876443222 110         000001111112 234556789999


Q ss_pred             CEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      |+||.++|......     ....|......+++.+.+++.+-++++-
T Consensus        70 DivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivv  116 (144)
T d1mlda1          70 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICII  116 (144)
T ss_dssp             SEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            99999999644321     4577777888899999998876666554

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.95  E-value=5.4e-05  Score=63.60  Aligned_cols=106  Identities=15%  Similarity=0.096  Sum_probs=68.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcch--HH----HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGA--AQ----ELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~--~~----~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      |||.|+||+|.+|+.++..|+.+|  .++..++++++.  ++    ++......       ...+.++....-.|.    
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~-------~~~~~~~~~~~~~d~----   69 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG-------TRSDANIYVESDENL----   69 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT-------SCCCCEEEEEETTCG----
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccc-------cccCCccccCCcchH----
Confidence            689999999999999999999999  589999987642  22    12111110       011222322211232    


Q ss_pred             HHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEE
Q 044905           77 KAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      +.++++|+||.++|.... +.    ....|..-...++....+.+-+.++
T Consensus        70 ~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~ii  119 (145)
T d1hyea1          70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIF  119 (145)
T ss_dssp             GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             HHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEE
Confidence            368899999999996543 22    2456666677778888777655544

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.90  E-value=5.9e-05  Score=63.41  Aligned_cols=110  Identities=12%  Similarity=0.087  Sum_probs=71.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..+||.|+|+ |++|+.++..|+.+|  .+|++++++..++..... ....  ... ......+..+|+       +.+.
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~-Dl~~--a~~-~~~~~~~~~~d~-------~~~~   71 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDAL-DLED--AQA-FTAPKKIYSGEY-------SDCK   71 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHH-HHHG--GGG-GSCCCEEEECCG-------GGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHH-HHhc--ccc-ccCCceEeeccH-------HHhc
Confidence            3569999996 999999999999988  689999998765432211 0110  000 112223455554       2478


Q ss_pred             CcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           81 NAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++|+||.++|.....     .....|..-...+++.+.+.+-+-++.+.
T Consensus        72 ~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivv  120 (146)
T d1ez4a1          72 DADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVA  120 (146)
T ss_dssp             TCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             cccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEe
Confidence            999999999865431     14456666777888888888876666553

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.90  E-value=9.1e-06  Score=68.61  Aligned_cols=95  Identities=13%  Similarity=-0.018  Sum_probs=60.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG----FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      |++|.|.||||++|+.+++.|+++.    .+++++.++.+........             .-.....++.+.+    .+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-------------~~~~~~~~~~~~~----~~   63 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-------------GTTGTLQDAFDLE----AL   63 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-------------TCCCBCEETTCHH----HH
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-------------CCceeeecccchh----hh
Confidence            6799999999999999999998863    4677777665432111000             0012233344433    36


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      .++|++|.+++..           -+..+...+...|.+-+| ++.++
T Consensus        64 ~~~DivF~a~~~~-----------~s~~~~~~~~~~g~~~~V-ID~Ss   99 (146)
T d1t4ba1          64 KALDIIVTCQGGD-----------YTNEIYPKLRESGWQGYW-IDAAS   99 (146)
T ss_dssp             HTCSEEEECSCHH-----------HHHHHHHHHHHTTCCCEE-EECSS
T ss_pred             hcCcEEEEecCch-----------HHHHhhHHHHhcCCCeec-ccCCc
Confidence            7899999988531           346677777788875333 45444

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.85  E-value=9.3e-06  Score=69.65  Aligned_cols=42  Identities=26%  Similarity=0.268  Sum_probs=38.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      |||.|+||+|.+|+.|++.|+++||+|++..|++++++.+..
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~   42 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            689999999999999999999999999999999988766654

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.77  E-value=2.9e-05  Score=66.74  Aligned_cols=82  Identities=22%  Similarity=0.132  Sum_probs=55.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      ++||.|+|+ |.+|..++..|.++||+|++++|++++.+.+...+.....     ...............++.+++.++|
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~e~~~~aD   74 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAE-----GPGLAGTAHPDLLTSDIGLAVKDAD   74 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEE-----SSSCCEEECCSEEESCHHHHHTTCS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchh-----hhhhhhhhhhhhhhhhhHhHhcCCC
Confidence            479999998 9999999999999999999999998877666543321000     0011111111111123567889999


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+...
T Consensus        75 ~iii~v~~   82 (184)
T d1bg6a2          75 VILIVVPA   82 (184)
T ss_dssp             EEEECSCG
T ss_pred             EEEEEEch
Confidence            99997753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.73  E-value=4.6e-05  Score=64.86  Aligned_cols=66  Identities=14%  Similarity=0.149  Sum_probs=49.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|.|+ |.+|+.+++.|.++||+|++++|+++..+.....+..            ... .+  +    .++++++|+
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~------------~~~-~~--~----~~~~~~~Di   60 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLV------------DEA-GQ--D----LSLLQTAKI   60 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSC------------SEE-ES--C----GGGGTTCSE
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhcc------------cee-ee--e----ccccccccc
Confidence            68999987 9999999999999999999999998766655443321            011 11  1    135789999


Q ss_pred             EEEccC
Q 044905           85 VVVTIG   90 (427)
Q Consensus        85 Vi~~ag   90 (427)
                      ||.++.
T Consensus        61 Iilavp   66 (165)
T d2f1ka2          61 IFLCTP   66 (165)
T ss_dssp             EEECSC
T ss_pred             ccccCc
Confidence            998663

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.70  E-value=4.8e-05  Score=65.42  Aligned_cols=74  Identities=24%  Similarity=0.219  Sum_probs=58.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +..+|+|+||+|.+|...++.+...|++|+++++++++.+.+...|.+.            +  .|..+...-....+++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~------------~--i~~~~~~~~~~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE------------A--ATYAEVPERAKAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE------------E--EEGGGHHHHHHHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccce------------e--eehhhhhhhhhccccc
Confidence            4568999999999999999999999999999999988888777777752            2  2555544334456789


Q ss_pred             CEEEEccC
Q 044905           83 GKVVVTIG   90 (427)
Q Consensus        83 d~Vi~~ag   90 (427)
                      |+||.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999876

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=0.00014  Score=61.03  Aligned_cols=75  Identities=11%  Similarity=0.077  Sum_probs=59.4

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcCE
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAGK   84 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d~   84 (427)
                      +|+|.|. |.+|..+++.|.++|++|+++..+++..........         ..++.++.||.+|++.|.++ ++.++.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~---------~~~~~vi~Gd~~d~~~L~~a~i~~a~~   74 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---------GDNADVIPGDSNDSSVLKKAGIDRCRA   74 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---------CTTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh---------cCCcEEEEccCcchHHHHHhccccCCE
Confidence            7999998 999999999999999999999999875433222111         12446999999999998876 578999


Q ss_pred             EEEccC
Q 044905           85 VVVTIG   90 (427)
Q Consensus        85 Vi~~ag   90 (427)
                      ||.+..
T Consensus        75 vi~~~~   80 (153)
T d1id1a_          75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEccc
Confidence            998765

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.61  E-value=0.00028  Score=58.58  Aligned_cols=107  Identities=14%  Similarity=0.123  Sum_probs=69.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhh-hhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKE-ELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~-~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |||.|+|+ |.+|+.++..|+.+|  .++..++++.+++......     +.+.. ...+..+..+|.       +.+++
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~D-----l~~~~~~~~~~~~~~~~~-------~~~~~   67 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALD-----LIHGTPFTRRANIYAGDY-------ADLKG   67 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHH-----HHHHGGGSCCCEEEECCG-------GGGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcc-----ccccccccccccccCCcH-------HHhcC
Confidence            69999997 999999999999887  5899999887654321110     00111 012334444443       34889


Q ss_pred             cCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+||.++|..... .    ....|..-...+++.+.+.+-+-++++.
T Consensus        68 adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv  115 (140)
T d1a5za1          68 SDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (140)
T ss_dssp             CSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence            99999999875542 1    3344555566777888887766666554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.61  E-value=0.00046  Score=57.29  Aligned_cols=109  Identities=18%  Similarity=0.075  Sum_probs=68.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |||.|+|| |.+|+.++..|+.+|  .+++.++++..++........+   .......+..+...+  |.    +++.++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~---~~~~~~~~~~i~~~~--~~----~~~~da   70 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE---SGPVGLFDTKVTGSN--DY----ADTANS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHT---THHHHTCCCEEEEES--CG----GGGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhc---ccchhcccceEEecC--CH----HHhcCC
Confidence            68999997 999999999999998  5899999988754322111000   001111222333222  22    358899


Q ss_pred             CEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+|+.++|.... +.    ....|..-...+++.+.+.+-+-++++
T Consensus        71 dvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv  116 (142)
T d1guza1          71 DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV  116 (142)
T ss_dssp             SEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred             eEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence            999999986443 22    334555556677778877775555544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.59  E-value=0.00033  Score=58.72  Aligned_cols=110  Identities=15%  Similarity=0.119  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..+||.|+|| |++|+.++..|+.+|  .++..++++++++........+   ..........+..+|.       +.+.
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~---~~~~~~~~~~~~~~d~-------~~l~   73 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH---GKVFAPKPVDIWHGDY-------DDCR   73 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH---HTTSSSSCCEEEECCG-------GGTT
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhh---CccccCCCeEEEECCH-------HHhc
Confidence            4568999997 999999999999988  4899999988754221110000   0000111223334443       3588


Q ss_pred             CcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++|+||.++|......     ....|..-...+++.+.+++-+.++.+
T Consensus        74 daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~iv  121 (148)
T d1ldna1          74 DADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV  121 (148)
T ss_dssp             TCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE
T ss_pred             cceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEE
Confidence            9999999998755311     345566666777888877775554433

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.0001  Score=63.20  Aligned_cols=74  Identities=18%  Similarity=0.231  Sum_probs=56.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHH---HHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAE---SIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~---sl~~al   79 (427)
                      +..+|||+||+|.+|...++.+...|++|+++++++++.+.+...|.+.            +  .|..+.+   .+.+..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~------------v--i~~~~~~~~~~i~~~t   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE------------V--FNHREVNYIDKIKKYV   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE------------E--EETTSTTHHHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccccCccc------------c--cccccccHHHHhhhhh
Confidence            3458999999999999999999999999999999887777776666651            2  2555433   333343


Q ss_pred             c--CcCEEEEccC
Q 044905           80 G--NAGKVVVTIG   90 (427)
Q Consensus        80 ~--g~d~Vi~~ag   90 (427)
                      .  ++|+||.+.|
T Consensus        94 ~~~g~d~v~d~~g  106 (174)
T d1yb5a2          94 GEKGIDIIIEMLA  106 (174)
T ss_dssp             CTTCEEEEEESCH
T ss_pred             ccCCceEEeeccc
Confidence            3  5899998876

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.50  E-value=6.9e-05  Score=64.84  Aligned_cols=77  Identities=19%  Similarity=0.179  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE-ecCCCHHHHHHHh--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE-SNFDSAESIAKAI--   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~-gDl~D~~sl~~al--   79 (427)
                      +..+|+|+||+|.+|...++.+...|++|++++|++++.+.+...+...            ++. -|-...+.+.+..  
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~------------vi~~~~~~~~~~~~~~~~~   96 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDA------------AFNYKTVNSLEEALKKASP   96 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE------------EEETTSCSCHHHHHHHHCT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhh------------hcccccccHHHHHHHHhhc
Confidence            3468999999999999999999999999999999998888787777651            222 2222344444444  


Q ss_pred             cCcCEEEEccCC
Q 044905           80 GNAGKVVVTIGP   91 (427)
Q Consensus        80 ~g~d~Vi~~ag~   91 (427)
                      .++|+||.+.|.
T Consensus        97 ~Gvd~v~D~vG~  108 (182)
T d1v3va2          97 DGYDCYFDNVGG  108 (182)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCceeEEecCc
Confidence            369999999873

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.49  E-value=6.9e-05  Score=55.96  Aligned_cols=46  Identities=26%  Similarity=0.371  Sum_probs=40.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLA   48 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~   48 (427)
                      +..+|+|+||+|.+|+..++.+...|++|+++++++++.+.+...|
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~lG   76 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLG   76 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHT
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHCC
Confidence            4568999999999999999999999999999999998877665543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.47  E-value=0.00023  Score=59.58  Aligned_cols=108  Identities=17%  Similarity=0.054  Sum_probs=67.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHH-CC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLR-EG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~-~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      |||.|+|++|++|++++..|.. .+  .++..++..+.......+.. +     ..-.-.... ...-.+    .+++.+
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~-h-----~~~~~~~~~-~~~~~~----~~~~~~   69 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLS-H-----IPTAVKIKG-FSGEDA----TPALEG   69 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHH-T-----SCSSCEEEE-ECSSCC----HHHHTT
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHH-C-----CccccCCcE-EEcCCC----ccccCC
Confidence            6999999999999999988764 34  78999987653211111110 0     000001111 112223    246889


Q ss_pred             cCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           82 AGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      +|+||.++|.....     .....|..-...+.+.+.+.+-+.++.+
T Consensus        70 aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aiviv  116 (145)
T d2cmda1          70 ADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGI  116 (145)
T ss_dssp             CSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             CCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence            99999999965431     1456677777888888888876665544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.46  E-value=0.00013  Score=61.70  Aligned_cols=113  Identities=17%  Similarity=0.056  Sum_probs=70.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .++||.|+|+ |.+|+.++..|..++ .++++++.+++.+........+.   ......+ ..+.+.. +   ...++.+
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~---~~~~~~~-~~~~~~~-~---~~~~~~~   76 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHV---TSVVDTN-VSVRAEY-S---YEAALTG   76 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHH---HHHTTCC-CCEEEEC-S---HHHHHTT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhh---ccccCCe-eEEeccC-c---hhhhhcC
Confidence            4569999998 999999998888888 48999988887543222111100   0000001 1222221 2   2457899


Q ss_pred             cCEEEEccCCCCC-C---------CCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTED-G---------PTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-~---------~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+|+.++|.... +         .....|..-...+++.+.+.+-+-++.+.
T Consensus        77 adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviiv  129 (154)
T d1pzga1          77 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVV  129 (154)
T ss_dssp             CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             CCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEe
Confidence            9999999986432 1         13345566677788888888876666554

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.44  E-value=0.00017  Score=61.40  Aligned_cols=73  Identities=25%  Similarity=0.326  Sum_probs=56.6

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ...++|+|+|+ |.+|+.++++|...|+ +|++..|+.+++..+.....              ....   +.+.+.+.+.
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~--------------~~~~---~~~~~~~~l~   83 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--------------GEAV---RFDELVDHLA   83 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--------------CEEC---CGGGHHHHHH
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh--------------cccc---cchhHHHHhc
Confidence            35679999998 9999999999999997 69999999888766644211              1122   3356777899


Q ss_pred             CcCEEEEccCCC
Q 044905           81 NAGKVVVTIGPT   92 (427)
Q Consensus        81 g~d~Vi~~ag~~   92 (427)
                      .+|+||++.+..
T Consensus        84 ~~Divi~atss~   95 (159)
T d1gpja2          84 RSDVVVSATAAP   95 (159)
T ss_dssp             TCSEEEECCSSS
T ss_pred             cCCEEEEecCCC
Confidence            999999998753

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.44  E-value=0.00073  Score=56.19  Aligned_cols=104  Identities=13%  Similarity=0.074  Sum_probs=67.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcc--hHH----HHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELG--AAQ----ELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~--~~~----~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      .||.|+||+|++|+.++..|+.+|.  ++..++.+..  .+.    ++.....        ...+..+..+|+.      
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--------~~~~~~i~~~~~~------   66 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------YDSNTRVRQGGYE------   66 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------TTCCCEEEECCGG------
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--------ccCCceEeeCCHH------
Confidence            4899999999999999999999983  7888875432  221    1111000        0123334445542      


Q ss_pred             HHhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           77 KAIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                       .+.++|+|+.++|.... +.    ..+.|..-...+++.+.+.+-+.++.+
T Consensus        67 -~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~iv  117 (142)
T d1o6za1          67 -DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT  117 (142)
T ss_dssp             -GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred             -HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence             37899999999996543 21    345566666777888888776555433

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.43  E-value=0.00064  Score=56.80  Aligned_cols=110  Identities=15%  Similarity=0.111  Sum_probs=69.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+||.|+|+ |++|+.++..|+.+|  .+++.++++..++........+.   .........+..+|.       +.+.+
T Consensus         1 ~kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a---~~~~~~~~~~~~~d~-------~~l~~   69 (146)
T d1hyha1           1 ARKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA---MANLEAHGNIVINDW-------AALAD   69 (146)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---GGGSSSCCEEEESCG-------GGGTT
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcc---ccccCCccceeccCH-------HHhcc
Confidence            379999996 999999999999988  58999998876542211100000   000011223344443       34789


Q ss_pred             cCEEEEccCCCCC-----C----CCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTED-----G----PTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-----~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+||.++|....     +    .....|..-...+.+.+.+.+-+-++++.
T Consensus        70 adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv  121 (146)
T d1hyha1          70 ADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI  121 (146)
T ss_dssp             CSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             ccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            9999999995431     1    12445666677778888888766665553

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.43  E-value=0.00048  Score=58.48  Aligned_cols=111  Identities=13%  Similarity=0.079  Sum_probs=70.0

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHH-HHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQEL-ARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l-~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      ++...||.|+|+ |.+|+.++..|+.+|  .++..++++.+++... .+.. +   ..........+...|+       .
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~-~---~~~~~~~~~~~~~~d~-------~   83 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQ-H---GSLFLSTPKIVFGKDY-------N   83 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHH-H---TTTTCSCCEEEEESSG-------G
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHh-C---cchhcCCCeEEeccch-------h
Confidence            355678999996 999999999999998  4899999887654211 1110 0   0000011111222333       3


Q ss_pred             HhcCcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           78 AIGNAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      .+.++|+||.++|.....     ...+.|..-...++..+.+++-+-++.+
T Consensus        84 ~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~iviv  134 (159)
T d2ldxa1          84 VSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIV  134 (159)
T ss_dssp             GGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEE
T ss_pred             hhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            478999999999864431     2456666666777777777776655544

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.42  E-value=9.5e-05  Score=64.75  Aligned_cols=81  Identities=15%  Similarity=0.110  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhh-hccceEEEecCCCHHHHHHHhc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEE-LKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~-~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |.|++|+|+|| |.-|++++..|.+.|++|++..|+++..+.+...+.....+.... .+++. +.      ..+.+++.
T Consensus         5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~-~t------~~l~~a~~   76 (189)
T d1n1ea2           5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNIT-FT------SDVEKAYN   76 (189)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEE-EE------SCHHHHHT
T ss_pred             ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccc-cc------hhhhhccC
Confidence            44567999998 999999999999999999999999887777655433211111110 11222 11      23567899


Q ss_pred             CcCEEEEccC
Q 044905           81 NAGKVVVTIG   90 (427)
Q Consensus        81 g~d~Vi~~ag   90 (427)
                      ++|.||.+..
T Consensus        77 ~ad~iiiavP   86 (189)
T d1n1ea2          77 GAEIILFVIP   86 (189)
T ss_dssp             TCSCEEECSC
T ss_pred             CCCEEEEcCc
Confidence            9999998774

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.42  E-value=0.00047  Score=57.62  Aligned_cols=66  Identities=14%  Similarity=0.133  Sum_probs=51.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      |+|.|+|. |.+|+.+++.|+++||+|++..|+++....+...+..             +. .+      ..+++..+|+
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-------------~~-~~------~~e~~~~~di   59 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVG-------------VT-ET------SEEDVYSCPV   59 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHT-------------CE-EC------CHHHHHTSSE
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccc-------------cc-cc------HHHHHhhcCe
Confidence            68999986 9999999999999999999999888766555544443             21 12      3457889999


Q ss_pred             EEEccCC
Q 044905           85 VVVTIGP   91 (427)
Q Consensus        85 Vi~~ag~   91 (427)
                      ||.+..+
T Consensus        60 Ii~~v~~   66 (152)
T d1i36a2          60 VISAVTP   66 (152)
T ss_dssp             EEECSCG
T ss_pred             EEEEecC
Confidence            9998864

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00013  Score=62.55  Aligned_cols=75  Identities=19%  Similarity=0.200  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al   79 (427)
                      +..+|+|+||+|.+|..+++.+...|.+|++++++..+.+.+...|.+.            ++  |.++.   +.+.+..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~------------vi--~~~~~d~~~~v~~~t   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ------------VI--NYREEDLVERLKEIT   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE------------EE--ETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeE------------EE--ECCCCCHHHHHHHHh
Confidence            3468999999999999999999999999999999999888887777762            33  55543   3444444


Q ss_pred             c--CcCEEEEccCC
Q 044905           80 G--NAGKVVVTIGP   91 (427)
Q Consensus        80 ~--g~d~Vi~~ag~   91 (427)
                      .  ++|+||.+.+.
T Consensus        94 ~g~g~d~v~d~~g~  107 (179)
T d1qora2          94 GGKKVRVVYDSVGR  107 (179)
T ss_dssp             TTCCEEEEEECSCG
T ss_pred             CCCCeEEEEeCccH
Confidence            3  47999988864

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.38  E-value=6e-05  Score=66.59  Aligned_cols=81  Identities=14%  Similarity=0.090  Sum_probs=52.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh---hhh---hhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS---YKI---LSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~---~~~---~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |+|.|.|. |++|..++..|.+.||+|++++.+..+.+.+......   ...   +......+.....      .++.++
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~------~~~~~~   73 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGT------TDFKKA   73 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE------SCHHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccC------CCHHHH
Confidence            68999986 9999999999999999999999988766655321110   000   0000000000111      124567


Q ss_pred             hcCcCEEEEccCCC
Q 044905           79 IGNAGKVVVTIGPT   92 (427)
Q Consensus        79 l~g~d~Vi~~ag~~   92 (427)
                      +.++|++|.|.+..
T Consensus        74 i~~~d~i~i~VpTP   87 (202)
T d1mv8a2          74 VLDSDVSFICVGTP   87 (202)
T ss_dssp             HHTCSEEEECCCCC
T ss_pred             HhhCCEEEEecCcc
Confidence            88899999999753

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.37  E-value=0.00027  Score=59.77  Aligned_cols=44  Identities=23%  Similarity=0.291  Sum_probs=39.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAA   49 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~   49 (427)
                      |+|.|.|. |..|+.+++.|+++||+|++.+|++++.+.+...+.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~   44 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGA   44 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhh
Confidence            68999996 999999999999999999999999988877766544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.37  E-value=0.0013  Score=54.74  Aligned_cols=105  Identities=14%  Similarity=0.184  Sum_probs=68.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      +.||.|+|+ |++|++++..|+.+|  .++..+++++.++..    +.. ...+       .....+...+  |.    +
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~-a~~~-------~~~~~i~~~~--~~----~   65 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH-GSSF-------YPTVSIDGSD--DP----E   65 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH-TGGG-------STTCEEEEES--CG----G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHh-cccc-------CCCceeecCC--CH----H
Confidence            468999997 999999999999998  489999988765422    211 1110       1122333332  21    3


Q ss_pred             HhcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           78 AIGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      .+.++|+||.++|......     ....|..-...++..+.+.+-+.++.+
T Consensus        66 ~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv  116 (143)
T d1llda1          66 ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML  116 (143)
T ss_dssp             GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred             HhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence            4888999999999765421     334565566677778877776555433

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.36  E-value=0.00034  Score=58.25  Aligned_cols=105  Identities=16%  Similarity=0.095  Sum_probs=63.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHHH-HHHHhhhhhhhhh-hhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQEL-ARLAASYKILSKE-ELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~l-~~~~~~~~~~~~~-~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +||.|+|+ |++|+.++..|+.+|  .+++.++++.+.+... .+..      +.. ......+..+|.       +.++
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~------~~~~~~~~~~~~~~~~-------~~~~   67 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDIN------HGLPFMGQMSLYAGDY-------SDVK   67 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHT------TSCCCTTCEEEC--CG-------GGGT
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeec------cCcccCCCeeEeeCcH-------HHhC
Confidence            58999997 999999999999998  4899999888643211 1110      000 011222333332       3589


Q ss_pred             CcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++|+|+.++|.... +.    ....|..-...+++.+.+.+-+-++.+
T Consensus        68 ~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~iv  115 (142)
T d1y6ja1          68 DCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV  115 (142)
T ss_dssp             TCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE
T ss_pred             CCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEE
Confidence            99999999986543 11    345556666778888888776555444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.36  E-value=0.0012  Score=56.06  Aligned_cols=110  Identities=15%  Similarity=0.065  Sum_probs=69.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +.+||.|+|+ |.+|+.++..|+.+|.  ++..++++.+.+........+   ..........+..+|+       +.+.
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h---~~~~~~~~~~~~~~d~-------~~~~   87 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQH---GSLFLQTPKIVADKDY-------SVTA   87 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHH---TGGGCCCSEEEECSSG-------GGGT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhc---cccccCCCeEEeccch-------hhcc
Confidence            4569999997 9999999999999994  899999987654211110000   0000011111222333       2488


Q ss_pred             CcCEEEEccCCCCCC-C----CccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           81 NAGKVVVTIGPTEDG-P----TSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~-~----~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ++|+|+.++|..... .    ....|..-...++..+.+.+-+-++.+
T Consensus        88 ~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiiv  135 (160)
T d1i0za1          88 NSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIV  135 (160)
T ss_dssp             TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred             cccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            999999999975432 1    345566666777888888776655444

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.35  E-value=0.00041  Score=58.72  Aligned_cols=107  Identities=17%  Similarity=0.194  Sum_probs=67.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA-   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~-   82 (427)
                      |++|.|.|- |..|+.+++.|+++||+|++.+|++++.+.+...+........+......++..-+.+.+.+...+... 
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~   79 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD   79 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTT
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccc
Confidence            678999985 999999999999999999999999988777665543321111112223345555555555555443221 


Q ss_pred             ---------CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           83 ---------GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        83 ---------d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                               +++|.+..         +....+..+.+.++..|+ +|+
T Consensus        80 ~~~~~l~~g~iiid~st---------~~p~~~~~~~~~~~~~gi-~~~  117 (162)
T d3cuma2          80 GLLAHIAPGTLVLECST---------IAPTSARKIHAAARERGL-AML  117 (162)
T ss_dssp             CHHHHSCTTCEEEECSC---------CCHHHHHHHHHHHHHTTC-EEE
T ss_pred             cccccCCCCCEEEECCC---------CCHHHHHHHHHHHHHCCC-cEE
Confidence                     23333222         223355677777877776 454

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.33  E-value=0.00012  Score=62.86  Aligned_cols=74  Identities=18%  Similarity=0.193  Sum_probs=56.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH---HHHHHHh-
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA---ESIAKAI-   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~---~sl~~al-   79 (427)
                      ..+|||+||+|.+|...++.+...|++|+++++++++.+.+...+...            ++  |..+.   +.+.+.. 
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~------------vi--~~~~~~~~~~v~~~t~   91 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY------------VG--DSRSVDFADEILELTD   91 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE------------EE--ETTCSTHHHHHHHHTT
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccc------------cc--cCCccCHHHHHHHHhC
Confidence            468999999999999999999999999999999988777776666551            22  33443   4444444 


Q ss_pred             -cCcCEEEEccCC
Q 044905           80 -GNAGKVVVTIGP   91 (427)
Q Consensus        80 -~g~d~Vi~~ag~   91 (427)
                       .++|++|.++|.
T Consensus        92 ~~g~d~v~d~~g~  104 (183)
T d1pqwa_          92 GYGVDVVLNSLAG  104 (183)
T ss_dssp             TCCEEEEEECCCT
T ss_pred             CCCEEEEEecccc
Confidence             369999998873

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.30  E-value=0.00011  Score=61.71  Aligned_cols=89  Identities=16%  Similarity=0.054  Sum_probs=55.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG----FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+|.|.||||++|+.|++.|+++.    .++..++.+.+..+..     .+       ..+. ....+..|.+    .+.
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~-----~~-------~~~~-~~~~~~~~~~----~~~   63 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP-----NF-------GKDA-GMLHDAFDIE----SLK   63 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC-----CS-------SSCC-CBCEETTCHH----HHT
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc-----cc-------CCcc-eeeecccchh----hhc
Confidence            689999999999999999998753    4666665443311110     00       0011 1122333433    368


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      ++|+||.+++..           -+..+...+...|.+-+|
T Consensus        64 ~~DvvF~alp~~-----------~s~~~~~~l~~~g~~~~V   93 (147)
T d1mb4a1          64 QLDAVITCQGGS-----------YTEKVYPALRQAGWKGYW   93 (147)
T ss_dssp             TCSEEEECSCHH-----------HHHHHHHHHHHTTCCSEE
T ss_pred             cccEEEEecCch-----------HHHHHhHHHHHcCCceEE
Confidence            899999988532           346677888888876433

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.30  E-value=0.0018  Score=54.24  Aligned_cols=112  Identities=14%  Similarity=0.087  Sum_probs=70.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +..||.|+|+ |.+|+.++..|+.++ .++..++++++.+........+   .......+..+...+  +    .+.+.+
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~---~~~~~~~~~~v~~~~--~----~~~~~~   71 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH---TNVMAYSNCKVSGSN--T----YDDLAG   71 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT---HHHHHTCCCCEEEEC--C----GGGGTT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhh---hccccCCCcEEEecc--c----ccccCC
Confidence            3569999996 999999998888777 5899999988754322111110   000011122233332  2    235889


Q ss_pred             cCEEEEccCCCCC-CC---------CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           82 AGKVVVTIGPTED-GP---------TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        82 ~d~Vi~~ag~~~~-~~---------~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +|+|+.++|.... +.         ....|......+++.+.+.+-+-++++.
T Consensus        72 advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv  124 (150)
T d1t2da1          72 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  124 (150)
T ss_dssp             CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             CcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence            9999999995432 11         2456666777888888888766665553

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.28  E-value=0.0014  Score=54.33  Aligned_cols=108  Identities=21%  Similarity=0.131  Sum_probs=67.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE-EecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV-ESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv-~gDl~D~~sl~~al~g~   82 (427)
                      +||.|+|+ |.+|+.++..|+.++ .++.+++.+.+.+........+   .......+..+. ..|+       +.+.++
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~---~~~~~~~~~~i~~~~d~-------~~~~~a   70 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE---ASPIEGFDVRVTGTNNY-------ADTANS   70 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHT---THHHHTCCCCEEEESCG-------GGGTTC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhc---cccccCCCCEEEecCcH-------HHhcCC
Confidence            58999997 999999999998888 5899999888754322111000   000001122233 2343       247889


Q ss_pred             CEEEEccCCCCC-C----CCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           83 GKVVVTIGPTED-G----PTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        83 d~Vi~~ag~~~~-~----~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      |+||.++|.... +    .....|..-...++....+.+-+.++.+
T Consensus        71 dvvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aiviv  116 (142)
T d1uxja1          71 DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM  116 (142)
T ss_dssp             SEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEE
T ss_pred             CEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEE
Confidence            999999996543 1    1345666666788888888776666544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.24  E-value=0.00013  Score=61.60  Aligned_cols=104  Identities=14%  Similarity=0.021  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEecCc--chHHHHHHHHhhhhhhhhhhhccceEEEecCCCHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-------SVRAGVPEL--GAAQELARLAASYKILSKEELKRLNAVESNFDSAE   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-------~V~al~R~~--~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~   73 (427)
                      .++||.|+||+|++|++++..|+..+.       ....+.-+.  .++..+... .+.     .....+..+...-.   
T Consensus         3 ~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~---   73 (154)
T d1y7ta1           3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVME-LED-----CAFPLLAGLEATDD---   73 (154)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHT-----TTCTTEEEEEEESC---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhh-hhc-----cccccccccccCCc---
Confidence            355999999999999999999998752       122222222  122211110 000     00111222333222   


Q ss_pred             HHHHHhcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcC
Q 044905           74 SIAKAIGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~g  116 (427)
                       ...+++++|+||.++|......     ....|..-...+...+.+..
T Consensus        74 -~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a  120 (154)
T d1y7ta1          74 -PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVA  120 (154)
T ss_dssp             -HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             -hhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence             2467999999999999765321     23445556667777777643

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.0002  Score=62.69  Aligned_cols=41  Identities=24%  Similarity=0.149  Sum_probs=37.7

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ   42 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~   42 (427)
                      ||.-++|.|.|| |.+|+.++..++..||+|++++++++.++
T Consensus         1 ~~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (192)
T d1f0ya2           1 KIIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   41 (192)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence            688899999998 99999999999999999999999987543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.21  E-value=0.00037  Score=59.27  Aligned_cols=76  Identities=12%  Similarity=0.051  Sum_probs=57.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +..+|+|+|+ |.+|...++.+...|++|+++++++.+.+.....|.+.            ++. ...+.+.......++
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~------------~i~-~~~~~~~~~~~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH------------YIA-TLEEGDWGEKYFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE------------EEE-GGGTSCHHHHSCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcE------------Eee-ccchHHHHHhhhccc
Confidence            3468999997 99999999988889999999999999888777777752            222 122334445566789


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |.+|.+.+..
T Consensus        93 d~vi~~~~~~  102 (168)
T d1piwa2          93 DLIVVCASSL  102 (168)
T ss_dssp             EEEEECCSCS
T ss_pred             ceEEEEecCC
Confidence            9999987754

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00066  Score=57.58  Aligned_cols=74  Identities=19%  Similarity=0.098  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +..+|+|.|+ |.+|...++.+...|+++++++++.++.+.....+.+              ...|..+.+......+++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad--------------~~i~~~~~~~~~~~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD--------------EVVNSRNADEMAAHLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS--------------EEEETTCHHHHHTTTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCc--------------EEEECchhhHHHHhcCCC
Confidence            4568999997 8899999999999999999999998887777777765              234677777766677889


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |++|.++|.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.21  E-value=0.0003  Score=57.19  Aligned_cols=70  Identities=20%  Similarity=0.257  Sum_probs=57.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH-hcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA-IGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a-l~g~d   83 (427)
                      ++|+|.|. |.+|+.+++.|  +|++|.++..+++....+...+.             .++.||.+|++.|.++ +..++
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~-------------~~i~Gd~~~~~~L~~a~i~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGA-------------NFVHGDPTRVSDLEKANVRGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTC-------------EEEESCTTSHHHHHHTTCTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCc-------------cccccccCCHHHHHHhhhhcCc
Confidence            46899997 89999999998  57788899999887766655444             4899999999999886 57899


Q ss_pred             EEEEccC
Q 044905           84 KVVVTIG   90 (427)
Q Consensus        84 ~Vi~~ag   90 (427)
                      .+|.+..
T Consensus        65 ~vi~~~~   71 (129)
T d2fy8a1          65 AVIVNLE   71 (129)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            9997664

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.20  E-value=0.0018  Score=53.63  Aligned_cols=105  Identities=18%  Similarity=0.077  Sum_probs=66.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcchHHH----HHHHHhhhhhhhhhhhccceEEEe-cCCCHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELGAAQE----LARLAASYKILSKEELKRLNAVES-NFDSAESIAK   77 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~~~~~----l~~~~~~~~~~~~~~~~rl~vv~g-Dl~D~~sl~~   77 (427)
                      |||.|+|+ |++|+.++..|+.+|  .++..++++++.+..    +......       ...+..+... |+       +
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~-------~~~~~~i~~~~d~-------~   65 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------IDKYPKIVGGADY-------S   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT-------TTCCCEEEEESCG-------G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccc-------cCCCCccccCCCH-------H
Confidence            79999997 999999999999888  579999988765421    2111100       0011123322 33       3


Q ss_pred             HhcCcCEEEEccCCCCC-CC----CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           78 AIGNAGKVVVTIGPTED-GP----TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~-~~----~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      .+.++|+||.++|.... +.    ....|..-...+.+.+.+.+-+.++++.
T Consensus        66 ~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivv  117 (142)
T d1ojua1          66 LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVV  117 (142)
T ss_dssp             GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEEC
T ss_pred             HhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEe
Confidence            58899999999985443 22    3344555556677777777765555443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.15  E-value=0.00053  Score=54.62  Aligned_cols=86  Identities=19%  Similarity=0.242  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      ...+|.|.|| |.+|+-++....+.|++|++++.+++. +..+.    .            .++.+|+.|.+.+.++.. 
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va----~------------~~i~~~~~d~~~l~~~~~~   72 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA----H------------RSHVINMLDGDALRRVVEL   72 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS----S------------EEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcC----C------------eEEECCCCCHHHHHHHHHh
Confidence            4568999997 999999999999999999999988763 12111    1            278899999999998775 


Q ss_pred             -CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           81 -NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                       .+|+|-.-        ..+++.    ..++.+.+.|+
T Consensus        73 ~~~DviT~E--------~EnI~~----~~L~~le~~g~   98 (111)
T d1kjqa2          73 EKPHYIVPE--------IEAIAT----DMLIQLEEEGL   98 (111)
T ss_dssp             HCCSEEEEC--------SSCSCH----HHHHHHHHTTC
T ss_pred             hCCceEEEE--------ecCcCH----HHHHHHHHCCC
Confidence             56888541        234553    36666666664

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.14  E-value=1.9e-05  Score=66.82  Aligned_cols=35  Identities=20%  Similarity=0.226  Sum_probs=33.2

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA   40 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~   40 (427)
                      |||+|+|+ |.+|+.++..|.+.|++|+++.|+...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            79999998 999999999999999999999999864

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.13  E-value=0.00077  Score=57.48  Aligned_cols=95  Identities=18%  Similarity=0.201  Sum_probs=72.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ++.+|+|+|+ |-.|..=++.+.+.|..|++++.++++++.+......             .+..-..+.+.+.+.+..+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-------------~~~~~~~~~~~l~~~~~~a   96 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-------------RVELLYSNSAEIETAVAEA   96 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-------------GSEEEECCHHHHHHHHHTC
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-------------cceeehhhhhhHHHhhccC
Confidence            3568999998 9999999999999999999999999888777665443             2333456788899999999


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHc
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA  115 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~  115 (427)
                      |+||.++-........-+.    ..+++.++.-
T Consensus        97 DivI~aalipG~~aP~lIt----~~mv~~Mk~G  125 (168)
T d1pjca1          97 DLLIGAVLVPGRRAPILVP----ASLVEQMRTG  125 (168)
T ss_dssp             SEEEECCCCTTSSCCCCBC----HHHHTTSCTT
T ss_pred             cEEEEeeecCCcccCeeec----HHHHhhcCCC
Confidence            9999988754433223333    5566666544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.002  Score=55.31  Aligned_cols=82  Identities=16%  Similarity=0.123  Sum_probs=61.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .++|+|+|+ |..|+.++..|...|. ++++..|+++....+......+.     ..-...+...++.+.+.+...+..+
T Consensus        18 ~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~   91 (182)
T d1vi2a1          18 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN-----ENTDCVVTVTDLADQQAFAEALASA   91 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHH-----HHSSCEEEEEETTCHHHHHHHHHTC
T ss_pred             CCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHH-----hhcCcceEeeecccccchhhhhccc
Confidence            468999998 8899999999999995 79999999886654433211100     0111235678999999999999999


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |.||++...
T Consensus        92 diiIN~Tp~  100 (182)
T d1vi2a1          92 DILTNGTKV  100 (182)
T ss_dssp             SEEEECSST
T ss_pred             ceeccccCC
Confidence            999998764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.11  E-value=0.00032  Score=59.54  Aligned_cols=44  Identities=23%  Similarity=0.316  Sum_probs=36.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEecCcchHHHHHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF--SVRAGVPELGAAQELARLA   48 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~--~V~al~R~~~~~~~l~~~~   48 (427)
                      |++|+|.|. |.+|..+++.|.+.|+  +|++++|+++..+.....+
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~   46 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG   46 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh
Confidence            568999996 9999999999999995  7888999887666554443

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.11  E-value=0.00011  Score=63.71  Aligned_cols=75  Identities=16%  Similarity=0.093  Sum_probs=47.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |++|.|.||||++|+.|++.|.++. +++..+..+.+....+.......          +.-......|.+.   ...++
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~----------~~~~~~~~~~~~~---~~~~~   67 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST----------LENSILSEFDPEK---VSKNC   67 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG----------CCCCBCBCCCHHH---HHHHC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchh----------hccccccccCHhH---hcccc
Confidence            6799999999999999999999875 68888875544322222111110          0011122334443   34579


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+.+.
T Consensus        68 dvvf~a~p~   76 (176)
T d1vkna1          68 DVLFTALPA   76 (176)
T ss_dssp             SEEEECCST
T ss_pred             ceEEEcccc
Confidence            999987764

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.09  E-value=0.0018  Score=55.13  Aligned_cols=73  Identities=19%  Similarity=0.171  Sum_probs=52.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|.|+ |..+++++..|.+.|.+|+++.|+.++++.+........          .+...++.+.     ....+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~----------~~~~~~~~~~-----~~~~~   80 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG----------SIQALSMDEL-----EGHEF   80 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS----------SEEECCSGGG-----TTCCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc----------cccccccccc-----ccccc
Confidence            4578999998 889999999999999999999999998877765433211          1233333321     13568


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |.||++...
T Consensus        81 dliIN~Tp~   89 (170)
T d1nyta1          81 DLIINATSS   89 (170)
T ss_dssp             SEEEECCSC
T ss_pred             ceeeccccc
Confidence            999997743

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.07  E-value=0.001  Score=56.84  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=58.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      +.+|.|+|- |..|..+++.|++.||+|++.+|++++.+.+...+...           .... .....+++..++..+|
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-----------~~~~-~a~~~~~~~~~~~~~~   68 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG-----------TKVL-GAHSLEEMVSKLKKPR   68 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTT-----------SSCE-ECSSHHHHHHHBCSSC
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccc-----------cccc-chhhhhhhhhhhcccc
Confidence            457999997 99999999999999999999999999888876654321           0111 2356778888899999


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      .+|.+...
T Consensus        69 ~ii~~~~~   76 (176)
T d2pgda2          69 RIILLVKA   76 (176)
T ss_dssp             EEEECSCT
T ss_pred             eEEEecCc
Confidence            99987754

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.06  E-value=0.00041  Score=59.87  Aligned_cols=74  Identities=23%  Similarity=0.327  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHh--c
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAI--G   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al--~   80 (427)
                      ..+|||+||+|.+|+..++.+...|.+|++.++++.+.+.+...+.+.            ++  |..+. +......  +
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~------------vi--~~~~~~~~~~~~~~~~   97 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKE------------VL--AREDVMAERIRPLDKQ   97 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSE------------EE--ECC---------CCSC
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccce------------ee--ecchhHHHHHHHhhcc
Confidence            357999999999999999999999999999999999888887777762            22  22221 1122222  3


Q ss_pred             CcCEEEEccCC
Q 044905           81 NAGKVVVTIGP   91 (427)
Q Consensus        81 g~d~Vi~~ag~   91 (427)
                      ++|+||.+.|.
T Consensus        98 gvD~vid~vgg  108 (176)
T d1xa0a2          98 RWAAAVDPVGG  108 (176)
T ss_dssp             CEEEEEECSTT
T ss_pred             CcCEEEEcCCc
Confidence            69999999885

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.03  E-value=0.00042  Score=58.12  Aligned_cols=66  Identities=20%  Similarity=0.194  Sum_probs=51.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      |+|.|.|+ |.+|+++++.|++.|++|++..|++++...+... +..             +    ..|   ..+++..+|
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~-------------~----~~~---~~~~~~~~d   59 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALP-------------Y----AMS---HQDLIDQVD   59 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCC-------------B----CSS---HHHHHHTCS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccccee-------------e----ech---hhhhhhccc
Confidence            68999996 9999999999999999999999998877666432 222             1    122   345677899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      +||.+.-|
T Consensus        60 vIilavkp   67 (152)
T d2ahra2          60 LVILGIKP   67 (152)
T ss_dssp             EEEECSCG
T ss_pred             eeeeecch
Confidence            99988754

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.01  E-value=0.00013  Score=61.09  Aligned_cols=88  Identities=18%  Similarity=0.135  Sum_probs=52.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++|.|.||||++|+.+++.|.+++   .++..+..+.+..+.+...           ...+.+...+.       ..+.
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-----------~~~~~~~~~~~-------~~~~   63 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-----------ESSLRVGDVDS-------FDFS   63 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-----------TEEEECEEGGG-------CCGG
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-----------cccchhccchh-------hhhc
Confidence            5799999999999999999997654   5788776554322111000           01111222221       1256


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      ++|++|.+++..           .+..+...+...|+ .+|
T Consensus        64 ~~d~vf~a~p~~-----------~s~~~~~~~~~~g~-~VI   92 (144)
T d2hjsa1          64 SVGLAFFAAAAE-----------VSRAHAERARAAGC-SVI   92 (144)
T ss_dssp             GCSEEEECSCHH-----------HHHHHHHHHHHTTC-EEE
T ss_pred             cceEEEecCCcc-----------hhhhhccccccCCc-eEE
Confidence            799999877531           34556666667775 344

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.98  E-value=0.00073  Score=56.44  Aligned_cols=65  Identities=12%  Similarity=0.331  Sum_probs=49.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.+.|+ |.+|+++++.|++.| ++|++.+|++++.+.+... ++              .+..|..       .+..+
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~--------------~~~~~~~-------~v~~~   58 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGV--------------ETSATLP-------ELHSD   58 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCC--------------EEESSCC-------CCCTT
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccc--------------ccccccc-------ccccc
Confidence            68999997 999999999999988 9999999999887776543 22              1222322       25678


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |+||.+.-|
T Consensus        59 Div~lavkP   67 (152)
T d1yqga2          59 DVLILAVKP   67 (152)
T ss_dssp             SEEEECSCH
T ss_pred             ceEEEecCH
Confidence            999987643

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.95  E-value=0.00057  Score=58.91  Aligned_cols=79  Identities=20%  Similarity=0.199  Sum_probs=51.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      |+|.|.|+ |..|+.++..|.+.|++|+...|+.+.  ...+.......     .-...+  -..++.-.+++.+++.++
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~-----~~~~~~--~~~~i~~~~~~~~~~~~a   72 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHP-----RLGVKL--NGVEIFWPEQLEKCLENA   72 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBT-----TTTBCC--CSEEEECGGGHHHHHTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhh-----hhcchh--ccccccccccHHHHHhcc
Confidence            79999998 999999999999999999999986543  22322111100     000011  111122245678889999


Q ss_pred             CEEEEccCC
Q 044905           83 GKVVVTIGP   91 (427)
Q Consensus        83 d~Vi~~ag~   91 (427)
                      |.||.+...
T Consensus        73 d~Ii~avps   81 (180)
T d1txga2          73 EVVLLGVST   81 (180)
T ss_dssp             SEEEECSCG
T ss_pred             chhhcccch
Confidence            999987753

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.93  E-value=0.00075  Score=56.16  Aligned_cols=39  Identities=23%  Similarity=0.256  Sum_probs=35.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA   40 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~   40 (427)
                      ..+++|+|+|+.|.+|+.+++.|.++||+|++.+|+...
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~   45 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   45 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence            456799999999999999999999999999999998754

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.93  E-value=0.00011  Score=63.12  Aligned_cols=47  Identities=38%  Similarity=0.487  Sum_probs=43.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS   50 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~   50 (427)
                      ..+|||+||+|.+|...++.....|++|++++++.++.+.+...+.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad   70 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGAS   70 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCS
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccc
Confidence            34799999999999999999999999999999999998888888876

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.93  E-value=0.0033  Score=49.57  Aligned_cols=88  Identities=19%  Similarity=0.242  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|+|.|+ |.+|.+-++.|++.|.+|++++...+.  ++.....         ..++.++...+.+.+     +.++
T Consensus        11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~--~~~~~~~---------~~~i~~~~~~~~~~d-----l~~~   73 (113)
T d1pjqa1          11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP--QFTVWAN---------EGMLTLVEGPFDETL-----LDSC   73 (113)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH--HHHHHHT---------TTSCEEEESSCCGGG-----GTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh--HHHHHHh---------cCCceeeccCCCHHH-----hCCC
Confidence            4579999998 999999999999999999999887763  2221111         234567777765533     6788


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCC
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      +.|+.+.+.      ..+|    ..+...|+..|+
T Consensus        74 ~lv~~at~d------~~~n----~~i~~~a~~~~i   98 (113)
T d1pjqa1          74 WLAIAATDD------DTVN----QRVSDAAESRRI   98 (113)
T ss_dssp             SEEEECCSC------HHHH----HHHHHHHHHTTC
T ss_pred             cEEeecCCC------HHHH----HHHHHHHHHcCC
Confidence            888876542      2333    568888888875

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.00065  Score=52.01  Aligned_cols=84  Identities=19%  Similarity=0.235  Sum_probs=58.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .++|+|+|. |-.|..+++.|.++|++|++.+.+...  ...+ ..             ...+..+.+ +.+    .+.+
T Consensus         5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~-~~-------------~~~~~~~~~-~~~----~~~~   64 (93)
T d2jfga1           5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL-PE-------------AVERHTGSL-NDE----WLMA   64 (93)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS-CT-------------TSCEEESBC-CHH----HHHH
T ss_pred             CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH-hh-------------ccceeeccc-chh----hhcc
Confidence            468999998 899999999999999999999986642  1111 11             112444443 322    3567


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +|.||.+-|.....           .+++.|++.|++
T Consensus        65 ~d~vi~SPGi~~~~-----------~~~~~a~~~gi~   90 (93)
T d2jfga1          65 ADLIVASPGIALAH-----------PSLSAAADAGIE   90 (93)
T ss_dssp             CSEEEECTTSCTTS-----------HHHHHHHHTTCE
T ss_pred             CCEEEECCCCCCCC-----------HHHHHHHHcCCC
Confidence            89999988864322           277888888874

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.85  E-value=0.00025  Score=61.29  Aligned_cols=46  Identities=30%  Similarity=0.394  Sum_probs=42.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhh
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAAS   50 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~   50 (427)
                      .+|||+||+|.+|+..++.+...|++|++++|++++.+.+...+.+
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad   78 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGAS   78 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEE
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccc
Confidence            4899999999999999999999999999999999988888887776

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0022  Score=54.80  Aligned_cols=75  Identities=19%  Similarity=0.140  Sum_probs=54.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHH----HHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAES----IAKA   78 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~s----l~~a   78 (427)
                      ..+|+|+|+ |.+|...++.+...|+ +|+++++++++.+.....|.+.            ++...-.+...    +.+.
T Consensus        29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~------------vi~~~~~~~~~~~~~i~~~   95 (182)
T d1vj0a2          29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL------------TLNRRETSVEERRKAIMDI   95 (182)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSE------------EEETTTSCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CccchhheecccccccccccccccccccccccccccceE------------EEeccccchHHHHHHHHHh
Confidence            458999997 9999999999999997 7999999998877776666652            33222233322    2222


Q ss_pred             h--cCcCEEEEccCC
Q 044905           79 I--GNAGKVVVTIGP   91 (427)
Q Consensus        79 l--~g~d~Vi~~ag~   91 (427)
                      .  .++|+||.++|.
T Consensus        96 ~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          96 THGRGADFILEATGD  110 (182)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hCCCCceEEeecCCc
Confidence            2  258999999875

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.83  E-value=0.00022  Score=61.63  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=28.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEe
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGV   35 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~   35 (427)
                      |++|.|.||||++|..|++.|..+ .++|..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            789999999999999999999998 47887664

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.81  E-value=0.0014  Score=53.35  Aligned_cols=31  Identities=19%  Similarity=0.289  Sum_probs=27.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEe
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGV   35 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~   35 (427)
                      |+|.|.|++|..|+.|.+.+.++|+++.+..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            6899999999999999999999999887653

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.76  E-value=0.00018  Score=62.63  Aligned_cols=37  Identities=22%  Similarity=0.367  Sum_probs=30.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~   39 (427)
                      ++.+|.|.||||++|+.|++.|.++. +++..+..+.+
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~   41 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRK   41 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTT
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEecccc
Confidence            45689999999999999999999986 68877764443

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.0042  Score=52.39  Aligned_cols=76  Identities=17%  Similarity=0.177  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh--
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI--   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al--   79 (427)
                      +..+|+|+|+ |.+|...+..+...|+ +|+++++++.+++.....|.+.            ++..+-.|.....+.+  
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~------------~~~~~~~~~~~~~~~~~~   92 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL------------VLQISKESPQEIARKVEG   92 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE------------EEECSSCCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcc------------cccccccccccccccccc
Confidence            3458999997 9999999999999998 7999999998877776777762            4455555655554444  


Q ss_pred             ---cCcCEEEEccCC
Q 044905           80 ---GNAGKVVVTIGP   91 (427)
Q Consensus        80 ---~g~d~Vi~~ag~   91 (427)
                         .++|+||.+.|.
T Consensus        93 ~~g~g~Dvvid~~G~  107 (171)
T d1pl8a2          93 QLGCKPEVTIECTGA  107 (171)
T ss_dssp             HHTSCCSEEEECSCC
T ss_pred             cCCCCceEEEeccCC
Confidence               368999999985

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=96.75  E-value=0.0024  Score=53.83  Aligned_cols=76  Identities=17%  Similarity=0.100  Sum_probs=55.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC--CCHHHHHHHh-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF--DSAESIAKAI-   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl--~D~~sl~~al-   79 (427)
                      +..+|+|+| +|.+|...++.+...|.+|+++++++.+.+.....+...            .+..|-  .+...+.+.+ 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~------------~~~~~~~~~~~~~~~~~~~   92 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV------------TLVVDPAKEEESSIIERIR   92 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE------------EEECCTTTSCHHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcE------------EEeccccccccchhhhhhh
Confidence            346899998 599999999999999999999999998877776666541            233332  2344433333 


Q ss_pred             ----cCcCEEEEccCC
Q 044905           80 ----GNAGKVVVTIGP   91 (427)
Q Consensus        80 ----~g~d~Vi~~ag~   91 (427)
                          .++|+||.++|.
T Consensus        93 ~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          93 SAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             HHSSSCCSEEEECSCC
T ss_pred             cccccCCceeeecCCC
Confidence                368999999875

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.75  E-value=0.0045  Score=51.73  Aligned_cols=103  Identities=12%  Similarity=-0.058  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-C------eEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-F------SVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAE   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~------~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~   73 (427)
                      .++||.|+||+|.+|++++..|+..+ +      +++.++.+...  ++.+.-. ..    +. .......+..-- +  
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~-~~----~~-~~~~~~~~~~~~-~--   72 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLME-LQ----DC-ALPLLKDVIATD-K--   72 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HH----HT-CCTTEEEEEEES-C--
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhh-hc----cc-ccccccccccCc-c--
Confidence            56799999999999999999998754 1      34544444332  2222110 00    00 011111222211 1  


Q ss_pred             HHHHHhcCcCEEEEccCCCCCC-----CCccccHHHHHHHHHHHHHc
Q 044905           74 SIAKAIGNAGKVVVTIGPTEDG-----PTSEVSTSDAFQVIQAAQLA  115 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~~~~-----~~~~vn~~~~~~ll~Aa~~~  115 (427)
                       ...++.++|+||.++|.....     ..+..|..-...+...+.+.
T Consensus        73 -~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~  118 (154)
T d5mdha1          73 -EEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY  118 (154)
T ss_dssp             -HHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred             -cccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence             246799999999999865432     13556666666777776554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.75  E-value=0.0019  Score=54.57  Aligned_cols=77  Identities=17%  Similarity=0.188  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHh-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAI-   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al-   79 (427)
                      +..+|+|+|++|.+|...++.+...| ..|+++.+++.+.+.+...|.+.            ++..+-.|. +.+.+.. 
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~------------~i~~~~~~~~~~~~~~~~   94 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY------------VINASMQDPLAEIRRITE   94 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSE------------EEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCce------------eeccCCcCHHHHHHHHhh
Confidence            34589999999999999999999888 58999999988877777777652            333333332 3333333 


Q ss_pred             -cCcCEEEEccCC
Q 044905           80 -GNAGKVVVTIGP   91 (427)
Q Consensus        80 -~g~d~Vi~~ag~   91 (427)
                       .++|++|.++|.
T Consensus        95 ~~~~d~vid~~g~  107 (170)
T d1jvba2          95 SKGVDAVIDLNNS  107 (170)
T ss_dssp             TSCEEEEEESCCC
T ss_pred             cccchhhhccccc
Confidence             358999998874

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.74  E-value=0.00048  Score=59.94  Aligned_cols=114  Identities=18%  Similarity=0.149  Sum_probs=61.3

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhh---hhhhh-hhccceEEEecCCCHHHHHHHhc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYK---ILSKE-ELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~---~~~~~-~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      |+|.|.| .|++|..++. ++++||+|++++-++.+...+.. +..+.   .+... ...+.. ...+..+    .....
T Consensus         1 MkI~ViG-lG~vGl~~a~-~~a~g~~V~g~Din~~~v~~l~~-g~~p~~e~~l~~~~~~~~~~-~~~~~~~----~~~~~   72 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGV-LLSLQNEVTIVDILPSKVDKINN-GLSPIQDEYIEYYLKSKQLS-IKATLDS----KAAYK   72 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHH-HHTTTSEEEEECSCHHHHHHHHT-TCCSSCCHHHHHHHHHSCCC-EEEESCH----HHHHH
T ss_pred             CEEEEEC-CChhHHHHHH-HHHCCCcEEEEECCHHHHHHHhh-cccccchhhHHHHhhhhhhh-hhccchh----hhhhh
Confidence            7899998 5999999986 55789999999999877666532 11100   00000 001111 1222222    23466


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEecc
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDG  126 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs  126 (427)
                      ++|+++.+.+....+..-.........+++......-..++.++|+
T Consensus        73 ~~~ii~v~vpt~~~~~~~~~~~~~v~~~~~~~~~~~~~~~iii~St  118 (196)
T d1dlja2          73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKST  118 (196)
T ss_dssp             HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSC
T ss_pred             ccccccccCCccccccCCCcceeEEeehhhhhhhcccceeEEeeee
Confidence            7899888876543322111122233444444444444455555544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.70  E-value=0.0018  Score=55.15  Aligned_cols=78  Identities=22%  Similarity=0.328  Sum_probs=57.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .|+|.|+|. |..|..++++|++.||+|.+.+|++++.+.+...+......        .... ...+.+.+...+...+
T Consensus         1 ~MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~   70 (178)
T d1pgja2           1 SMDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFA--------GNLK-AFETMEAFAASLKKPR   70 (178)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTG--------GGEE-ECSCHHHHHHHBCSSC
T ss_pred             CCEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccc--------cchh-hhhhhhHHHHhcccce
Confidence            368999995 99999999999999999999999999888887665432111        0111 2345667777777777


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      .++.+..+
T Consensus        71 ~~~~~~~~   78 (178)
T d1pgja2          71 KALILVQA   78 (178)
T ss_dssp             EEEECCCC
T ss_pred             EEEEeecC
Confidence            77766643

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.67  E-value=0.0091  Score=51.03  Aligned_cols=104  Identities=11%  Similarity=-0.005  Sum_probs=59.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccce-EEEecCCCHHHH
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-------FSVRAGVPELGAAQELARLAASYKILSKEELKRLN-AVESNFDSAESI   75 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-------~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~-vv~gDl~D~~sl   75 (427)
                      +.+|.|+||+|.+|.+++..|+..+       ..++.++.+... ..+.....+  +.+.. ...+. ++.++  |   .
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~-~~l~g~~md--l~d~a-~~~~~~~~~~~--~---~   94 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSF-QALEGVAME--LEDSL-YPLLREVSIGI--D---P   94 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH-HHHHHHHHH--HHTTT-CTTEEEEEEES--C---H
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcccc-chhcchhhh--hcccc-cccccCccccc--c---c
Confidence            3479999999999999999998753       145555554432 111111110  00000 01111 22221  2   3


Q ss_pred             HHHhcCcCEEEEccCCCCCCC-----CccccHHHHHHHHHHHHHcC
Q 044905           76 AKAIGNAGKVVVTIGPTEDGP-----TSEVSTSDAFQVIQAAQLAG  116 (427)
Q Consensus        76 ~~al~g~d~Vi~~ag~~~~~~-----~~~vn~~~~~~ll~Aa~~~g  116 (427)
                      .+++.++|+||.++|......     ....|..-...+.+++.+..
T Consensus        95 ~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a  140 (175)
T d7mdha1          95 YEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVA  140 (175)
T ss_dssp             HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC
Confidence            567999999999998754322     33455556667777777753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.51  E-value=0.005  Score=53.07  Aligned_cols=39  Identities=23%  Similarity=0.146  Sum_probs=35.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ   42 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~   42 (427)
                      +-++|.|.|| |.+|+.++..++..|++|++++++++.++
T Consensus         3 ~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (186)
T d1wdka3           3 DVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIE   41 (186)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence            4578999998 99999999999999999999999987543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.43  E-value=0.0087  Score=45.33  Aligned_cols=85  Identities=20%  Similarity=0.171  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      .|+|.++|-.|-==+.|++.|+++|+.|.+.++..+. .+.|...|+.             +..+  .+.+    -+.++
T Consensus         1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~-------------i~~g--h~~~----~i~~~   61 (89)
T d1j6ua1           1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIP-------------IFVP--HSAD----NWYDP   61 (89)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCC-------------EESS--CCTT----SCCCC
T ss_pred             CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCe-------------EEee--eccc----ccCCC
Confidence            3789999985533357999999999999999998764 4667777765             3333  1211    14678


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      |.||...+....++           .+.+|++.|++
T Consensus        62 d~vV~SsAI~~~np-----------el~~A~~~gIp   86 (89)
T d1j6ua1          62 DLVIKTPAVRDDNP-----------EIVRARMERVP   86 (89)
T ss_dssp             SEEEECTTCCTTCH-----------HHHHHHHTTCC
T ss_pred             CEEEEecCcCCCCH-----------HHHHHHHcCCC
Confidence            99998887654333           56778888875

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.40  E-value=0.0048  Score=52.18  Aligned_cols=43  Identities=21%  Similarity=0.349  Sum_probs=37.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELAR   46 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~   46 (427)
                      ..++|+|+|+ |..|++++..|.+.|+ +|+++.|+.++.+.+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~   59 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAA   59 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHH
Confidence            3468999998 9999999999999996 79999999988777754

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.37  E-value=0.009  Score=49.88  Aligned_cols=76  Identities=26%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhcC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~g   81 (427)
                      +..+|+|.|+ |.+|...++.+...|++|+++++++.+.+.....|.+.            ++..+-.| .+.+.+...+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~------------~i~~~~~~~~~~~~~~~~g   93 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASL------------TVNARQEDPVEAIQRDIGG   93 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE------------EEETTTSCHHHHHHHHHSS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCccc------------cccccchhHHHHHHHhhcC
Confidence            3468999987 99999999999899999999999998877777767651            33222222 3445555566


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      .+.+|.+.+.
T Consensus        94 ~~~~i~~~~~  103 (166)
T d1llua2          94 AHGVLVTAVS  103 (166)
T ss_dssp             EEEEEECCSC
T ss_pred             Cccccccccc
Confidence            6666665553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.34  E-value=0.0068  Score=51.48  Aligned_cols=74  Identities=19%  Similarity=0.214  Sum_probs=52.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +.++|+|.|+ |..++.++..|.+.+.+|+++.|+.++++.+.......        .++..+..|-.       .+..+
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~--------~~~~~~~~~~~-------~~~~~   80 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------GNIQAVSMDSI-------PLQTY   80 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------SCEEEEEGGGC-------CCSCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc--------cccchhhhccc-------ccccc
Confidence            4568999997 88999999999998899999999998877775533221        11122332211       25679


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |.||++....
T Consensus        81 diiIN~tp~g   90 (171)
T d1p77a1          81 DLVINATSAG   90 (171)
T ss_dssp             SEEEECCCC-
T ss_pred             ceeeeccccc
Confidence            9999987643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.30  E-value=0.013  Score=47.91  Aligned_cols=76  Identities=18%  Similarity=0.185  Sum_probs=50.6

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCE
Q 044905            6 TVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGK   84 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~   84 (427)
                      ||.|.|++|..|+.|++.+.+. ++++.+..-..+....+                                 ...++|+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~---------------------------------~~~~~Dv   47 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL---------------------------------TDGNTEV   47 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH---------------------------------HTTTCSE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh---------------------------------ccccCCE
Confidence            6999999999999999998775 58877655322211111                                 1245788


Q ss_pred             EEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           85 VVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        85 Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      ||-..-|.           .+...++.|.+.|++-++  .|++
T Consensus        48 vIDFS~p~-----------~~~~~~~~~~~~~~~~Vi--GTTG   77 (135)
T d1yl7a1          48 VIDFTHPD-----------VVMGNLEFLIDNGIHAVV--GTTG   77 (135)
T ss_dssp             EEECCCTT-----------THHHHHHHHHHTTCEEEE--CCCC
T ss_pred             EEEcccHH-----------HHHHHHHHHHhcCCCEEE--eccc
Confidence            88755442           456678888888876443  6555

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.29  E-value=0.0041  Score=53.50  Aligned_cols=108  Identities=17%  Similarity=0.199  Sum_probs=69.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEE-------Eec--CCCHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAV-------ESN--FDSAE   73 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv-------~gD--l~D~~   73 (427)
                      ++-+|+|+|| |-.|..=++..+.-|..|++++.++.+++.+...+..+..+.......++..       .-+  ....+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            3568999998 9999999999999999999999999988888776654211100000000000       001  12356


Q ss_pred             HHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHc
Q 044905           74 SIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLA  115 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~  115 (427)
                      .|.+.+..+|.||.++-........-++    ..+++.++.-
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit----~~mv~~Mk~G  144 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLIT----EEMVTKMKPG  144 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSC----HHHHTTSCTT
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeeh----HHHHHhcCCC
Confidence            7788899999999988655433223343    4566666543

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.27  E-value=0.0038  Score=53.20  Aligned_cols=76  Identities=13%  Similarity=0.097  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC-HHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS-AESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D-~~sl~~al~   80 (427)
                      +..+|+|.|+ |.+|...++.+...|+ +|+++++++.+.+.....|...            ++.-.-.+ .+.+.+...
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~------------~i~~~~~~~~~~v~~~t~   93 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATD------------ILNYKNGHIEDQVMKLTN   93 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSE------------EECGGGSCHHHHHHHHTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccc------------cccccchhHHHHHHHHhh
Confidence            3458999987 9999999999999996 7999999988877777777652            22111122 445555554


Q ss_pred             --CcCEEEEccCC
Q 044905           81 --NAGKVVVTIGP   91 (427)
Q Consensus        81 --g~d~Vi~~ag~   91 (427)
                        ++|+||.++|.
T Consensus        94 g~G~D~vid~~g~  106 (174)
T d1jqba2          94 GKGVDRVIMAGGG  106 (174)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             ccCcceEEEccCC
Confidence              58999999985

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.15  E-value=0.02  Score=43.82  Aligned_cols=85  Identities=27%  Similarity=0.357  Sum_probs=57.8

Q ss_pred             CCCEEEEEcCCcHHH-HHHHHHHHHCCCeEEEEecCcch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAG-VRIAQTLLREGFSVRAGVPELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG-~~lv~~LL~~G~~V~al~R~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      ..++|.+.|..| +| +.|++.|.++||+|.+.++..+. .+.|...|+.             +..+.-  ++    -+.
T Consensus         7 ~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~-------------v~~g~~--~~----~i~   66 (96)
T d1p3da1           7 RVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAK-------------IYIGHA--EE----HIE   66 (96)
T ss_dssp             TCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCE-------------EEESCC--GG----GGT
T ss_pred             hCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCe-------------EEECCc--cc----cCC
Confidence            356899998744 55 77899999999999999988663 3566665554             443332  11    246


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      ++|.||...+....++           -+.+|++.|++
T Consensus        67 ~~d~vV~S~AI~~~np-----------el~~A~~~gip   93 (96)
T d1p3da1          67 GASVVVVSSAIKDDNP-----------ELVTSKQKRIP   93 (96)
T ss_dssp             TCSEEEECTTSCTTCH-----------HHHHHHHTTCC
T ss_pred             CCCEEEECCCcCCCCH-----------HHHHHHHcCCC
Confidence            7899988777643232           45567777875

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=95.97  E-value=0.0022  Score=53.72  Aligned_cols=31  Identities=32%  Similarity=0.435  Sum_probs=25.1

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC---eEEEEec
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF---SVRAGVP   36 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~---~V~al~R   36 (427)
                      +|.|.||||++|..|++.|.++.+   ++..+..
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s   36 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS   36 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecc
Confidence            799999999999999999988854   4444443

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.91  E-value=0.0078  Score=49.47  Aligned_cols=83  Identities=14%  Similarity=0.162  Sum_probs=57.3

Q ss_pred             CCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc
Q 044905            4 SGTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG   80 (427)
Q Consensus         4 ~~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~   80 (427)
                      +++|+|.|||   +..|..+++.|++.||+|+.+........     |.              -+.-++      .+.-.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~-----G~--------------~~~~sl------~dlp~   73 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVL-----GR--------------KCYPSV------LDIPD   73 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET-----TE--------------ECBSSG------GGCSS
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccC-----CC--------------cccccc------cccCc
Confidence            5789999998   78999999999999999988865532111     00              111122      22234


Q ss_pred             CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           81 NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        81 g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                      ..|.++.+..+           ..+..+++.|...|++.++|
T Consensus        74 ~iD~v~i~vp~-----------~~~~~~~~e~~~~g~k~v~~  104 (139)
T d2d59a1          74 KIEVVDLFVKP-----------KLTMEYVEQAIKKGAKVVWF  104 (139)
T ss_dssp             CCSEEEECSCH-----------HHHHHHHHHHHHHTCSEEEE
T ss_pred             cceEEEEEeCH-----------HHHHHHHHHHHHhCCCEEEE
Confidence            57888876653           15567888888899987764

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=95.81  E-value=0.0042  Score=49.52  Aligned_cols=81  Identities=21%  Similarity=0.290  Sum_probs=55.4

Q ss_pred             CEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      ++|+|.|+|   +..|..+++.|++.||+|+.+..+.+...     |.              -+.-+      +.++-..
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~-----G~--------------~~y~s------l~~lp~~   56 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIE-----GL--------------KCYRS------VRELPKD   56 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEET-----TE--------------ECBSS------GGGSCTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccccc-----Cc--------------ccccc------chhcccc
Confidence            689999988   77999999999999999998765432211     10              01112      2223345


Q ss_pred             cCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           82 AGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        82 ~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .|.++.+..+.           .+..+++.|...|++.++
T Consensus        57 ~D~vvi~vp~~-----------~~~~~l~~~~~~g~k~v~   85 (116)
T d1y81a1          57 VDVIVFVVPPK-----------VGLQVAKEAVEAGFKKLW   85 (116)
T ss_dssp             CCEEEECSCHH-----------HHHHHHHHHHHTTCCEEE
T ss_pred             ceEEEEEeCHH-----------HHHHHHHHHHhcCCceEE
Confidence            78888766531           456788888889998765

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.79  E-value=0.018  Score=47.80  Aligned_cols=74  Identities=22%  Similarity=0.136  Sum_probs=54.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC-CC-HHHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF-DS-AESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl-~D-~~sl~~al~   80 (427)
                      +..+|+|.|+ |.+|...++.+...|++|+++++++++.+.....|.+             .+.... .| .+.+.....
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~-------------~~~~~~~~~~~~~~~~~~~   92 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD-------------LVVNPLKEDAAKFMKEKVG   92 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS-------------EEECTTTSCHHHHHHHHHS
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcc-------------eecccccchhhhhcccccC
Confidence            3468999986 9999999999999999999999999888877777765             222211 22 344566667


Q ss_pred             CcCEEEEccC
Q 044905           81 NAGKVVVTIG   90 (427)
Q Consensus        81 g~d~Vi~~ag   90 (427)
                      +.+.+|.+++
T Consensus        93 ~~~~~v~~~~  102 (168)
T d1rjwa2          93 GVHAAVVTAV  102 (168)
T ss_dssp             SEEEEEESSC
T ss_pred             CCceEEeecC
Confidence            7777777665

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.78  E-value=0.021  Score=48.08  Aligned_cols=76  Identities=16%  Similarity=0.139  Sum_probs=52.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHhc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSA-ESIAKAIG   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al~   80 (427)
                      +..+|+|+|+ |.+|...++.+...|+. |++.++++.+.+.....|..            +++..+-.|. +.+.+...
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~------------~~i~~~~~~~~~~i~~~t~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGAT------------HVINSKTQDPVAAIKEITD   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCS------------EEEETTTSCHHHHHHHHTT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCe------------EEEeCCCcCHHHHHHHHcC
Confidence            4458999998 99999999999888975 55666777777766676765            1333332332 33333332


Q ss_pred             -CcCEEEEccCC
Q 044905           81 -NAGKVVVTIGP   91 (427)
Q Consensus        81 -g~d~Vi~~ag~   91 (427)
                       ++|+||.++|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence             58999999885

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.68  E-value=0.0052  Score=52.79  Aligned_cols=74  Identities=24%  Similarity=0.201  Sum_probs=48.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEecCcchHHHHH-HHHhhhhhhhhhhhccceEEEecCCCH-HHHHHHh-c
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFS-VRAGVPELGAAQELA-RLAASYKILSKEELKRLNAVESNFDSA-ESIAKAI-G   80 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~-V~al~R~~~~~~~l~-~~~~~~~~~~~~~~~rl~vv~gDl~D~-~sl~~al-~   80 (427)
                      .+|||+||+|.+|+..++.+...|.+ |++++++.++...+. ..+.+.            ++...-.+. +.+.+.. +
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~------------vi~~~~~~~~~~~~~~~~~   99 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA------------AVNYKTGNVAEQLREACPG   99 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE------------EEETTSSCHHHHHHHHCTT
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE------------EeeccchhHHHHHHHHhcc
Confidence            58999999999999999999999976 555566655544454 334441            232222233 3333332 3


Q ss_pred             CcCEEEEccC
Q 044905           81 NAGKVVVTIG   90 (427)
Q Consensus        81 g~d~Vi~~ag   90 (427)
                      ++|+||.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999887

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.60  E-value=0.016  Score=48.59  Aligned_cols=76  Identities=12%  Similarity=0.118  Sum_probs=52.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec--CCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN--FDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD--l~D~~sl~~al   79 (427)
                      +..+|+|.|+ |.+|...++.+...|. .|++.++++.+.+.....|.+.            ++..+  -.+.....+..
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~------------~i~~~~~~~~~~~~~~~~   94 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE------------CINPQDFSKPIQEVLIEM   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE------------EECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcE------------EEeCCchhhHHHHHHHHH
Confidence            3458999998 6789999999999995 6777778888877777777762            22221  12233333332


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|+||.++|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence              469999999875

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.58  E-value=0.0086  Score=48.54  Aligned_cols=87  Identities=14%  Similarity=0.072  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCC---cHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            3 DSGTVFVAGAT---GQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGAT---G~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      .+++|+|.|||   |..|..+++.|++.| ++|+.+........     |.              -..-++.|      +
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~-----G~--------------~~y~sl~d------l   61 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ-----GV--------------KAYKSVKD------I   61 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET-----TE--------------ECBSSTTS------C
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC-----Ce--------------Eeecchhh------c
Confidence            56899999999   999999999988766 78998876543211     11              12223333      2


Q ss_pred             hcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEec
Q 044905           79 IGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYD  125 (427)
Q Consensus        79 l~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSS  125 (427)
                      -..+|.++.+..+.           .+..+++.|.+.|++.++.+|+
T Consensus        62 p~~vDlvvi~vp~~-----------~~~~~~~~~~~~g~~~~vi~s~   97 (129)
T d2csua1          62 PDEIDLAIIVVPKR-----------FVKDTLIQCGEKGVKGVVIITA   97 (129)
T ss_dssp             SSCCSEEEECSCHH-----------HHHHHHHHHHHHTCCEEEECCC
T ss_pred             CCCCceEEEecChH-----------HhHHHHHHHHHcCCCEEEEecc
Confidence            34589998776531           5567899999999998876653

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.52  E-value=0.021  Score=47.91  Aligned_cols=76  Identities=18%  Similarity=0.133  Sum_probs=53.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +..+|+|.|+ |.+|...++.+...|. .|++.++++.+.+.....+..            .++..+-.+.+.+.+... 
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~------------~~i~~~~~~~~~~~~~~~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGAD------------HVVDARRDPVKQVMELTRG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCS------------EEEETTSCHHHHHHHHTTT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccc------------eeecCcccHHHHHHHhhCC
Confidence            3468999986 9999999999988884 777788888777766666655            233333223344444433 


Q ss_pred             -CcCEEEEccCC
Q 044905           81 -NAGKVVVTIGP   91 (427)
Q Consensus        81 -g~d~Vi~~ag~   91 (427)
                       ++|+||.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence             58999999885

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=95.50  E-value=0.019  Score=48.33  Aligned_cols=76  Identities=14%  Similarity=0.193  Sum_probs=53.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE-ecCCC-HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE-SNFDS-AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~-gDl~D-~~sl~~al   79 (427)
                      +..+|+|.|+ |.+|...+..+...| ..|+++++++.+.+.....+...            .+. .+-.| .....+..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~------------~i~~~~~~~~~~~~~~~~   94 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE------------CVNPQDYKKPIQEVLTEM   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE------------EECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCee------------EEecCCchhHHHHHHHHH
Confidence            3458999999 669999999999988 58999999999877776666652            221 12222 33333333


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|++|.+.|.
T Consensus        95 ~~~G~D~vid~~G~  108 (176)
T d2jhfa2          95 SNGGVDFSFEVIGR  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             hcCCCCEEEecCCc
Confidence              479999999885

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=95.42  E-value=0.017  Score=51.19  Aligned_cols=74  Identities=12%  Similarity=0.159  Sum_probs=51.2

Q ss_pred             CCCEEEEEc----------------CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE
Q 044905            3 DSGTVFVAG----------------ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE   66 (427)
Q Consensus         3 ~~~kIlItG----------------ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~   66 (427)
                      ..++||||+                +||..|.+|+++|..+|++|+++....+...                ...+.++ 
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~----------------p~~~~~~-   67 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT----------------PPFVKRV-   67 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC----------------CTTEEEE-
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc----------------ccccccc-
Confidence            456888887                5899999999999999999999987654200                0111233 


Q ss_pred             ecCCCHHHHH----HHhcCcCEEEEccCCCCC
Q 044905           67 SNFDSAESIA----KAIGNAGKVVVTIGPTED   94 (427)
Q Consensus        67 gDl~D~~sl~----~al~g~d~Vi~~ag~~~~   94 (427)
                       .+...+.+.    ..+..+|++|++|+....
T Consensus        68 -~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          68 -DVMTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             -ECCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             -eehhhHHHHHHHHhhhccceeEeeeechhhh
Confidence             334444443    445689999999987653

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.36  E-value=0.013  Score=49.75  Aligned_cols=105  Identities=16%  Similarity=0.105  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEec-Ccch-HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVP-ELGA-AQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R-~~~~-~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ++++|.|-|- |.||+.+++.|+.+. .+|+++.- ++.. ...+...+............  .+....+.....+..++
T Consensus         1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   77 (172)
T d2czca2           1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIP--RFEKEGFEVAGTLNDLL   77 (172)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHH--HHHHHTCCCSCBHHHHH
T ss_pred             CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeeccccccee--eecccCccccchhhhhh
Confidence            3568999995 999999999999875 78887763 3322 22222222110000000000  00000111122344556


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      .++|+||-|.|..           -+..-++.-..+|+++++
T Consensus        78 ~~vDvViEcTG~f-----------~~~~~~~~hl~~G~k~Vi  108 (172)
T d2czca2          78 EKVDIIVDATPGG-----------IGAKNKPLYEKAGVKAIF  108 (172)
T ss_dssp             TTCSEEEECCSTT-----------HHHHHHHHHHHHTCEEEE
T ss_pred             ccCCEEEECCCCC-----------CCHHHHHHHHHcCCCEEE
Confidence            7899999999864           112233444567886554

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=95.34  E-value=0.015  Score=49.38  Aligned_cols=81  Identities=20%  Similarity=0.141  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCCcHHHHH--HHHHHHHC----CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            3 DSGTVFVAGATGQAGVR--IAQTLLRE----GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~--lv~~LL~~----G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      ++|||.|.|| |.+|..  ++..|+..    +.+++.++.++.+++.......+.   .......+++...  +|   +.
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~---~~~~~~~~~i~~~--td---~~   71 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKY---VEEVGADLKFEKT--MN---LD   71 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHH---HHHTTCCCEEEEE--SC---HH
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHH---HHhcCCCeEEEEe--CC---hh
Confidence            4689999997 888864  44555543    469999999987654322211110   0000112222222  23   45


Q ss_pred             HHhcCcCEEEEccCCC
Q 044905           77 KAIGNAGKVVVTIGPT   92 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~   92 (427)
                      +++.++|+||++++..
T Consensus        72 eaL~dad~Vv~~~~~g   87 (171)
T d1obba1          72 DVIIDADFVINTAMVG   87 (171)
T ss_dssp             HHHTTCSEEEECCCTT
T ss_pred             hcccCCCeEeeecccc
Confidence            6899999999987653

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.23  E-value=0.00077  Score=57.31  Aligned_cols=99  Identities=17%  Similarity=0.165  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEe-cCcchHHHHHHHHhhhhhhhhhhhccce-EEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGV-PELGAAQELARLAASYKILSKEELKRLN-AVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~-R~~~~~~~l~~~~~~~~~~~~~~~~rl~-vv~gDl~D~~sl~~al   79 (427)
                      .+++|+|.|++|..|+.|++.+++. ++++++.. |.....- -...+.-.      ...... .+..|+      ...+
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~-g~d~~~~~------~~~~~~~~~~~~~------~~~~   69 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLL-GSDAGELA------GAGKTGVTVQSSL------DAVK   69 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTC-SCCTTCSS------SSSCCSCCEESCS------TTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhc-cchhhhhh------ccccCCceeeccH------HHHh
Confidence            4578999999999999999999986 68877665 3322100 00000000      000001 122222      3456


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccc
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGN  127 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~  127 (427)
                      ..+|+||-..-|           ..+...++.|.+++++-++  .|++
T Consensus        70 ~~~DViIDFs~p-----------~~~~~~~~~a~~~~~~~Vi--GTTG  104 (162)
T d1diha1          70 DDFDVFIDFTRP-----------EGTLNHLAFCRQHGKGMVI--GTTG  104 (162)
T ss_dssp             TSCSEEEECSCH-----------HHHHHHHHHHHHTTCEEEE--CCCC
T ss_pred             cccceEEEeccH-----------HHHHHHHHHHHhccceeEE--ecCC
Confidence            789999875433           2667889999999986444  6665

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.13  E-value=0.059  Score=45.44  Aligned_cols=76  Identities=14%  Similarity=0.172  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEE-ecCCC-HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE-SNFDS-AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~-gDl~D-~~sl~~al   79 (427)
                      +..+|+|+|+ |.+|...+..+...| .+|+++++++++++.....|.++            ++. -|-.+ ...+.+..
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~------------~in~~~~~~~~~~~~~~~   95 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE------------CISPKDSTKPISEVLSEM   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSE------------EECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcE------------EECccccchHHHHHHHHh
Confidence            3458999997 999999999999999 58999999999988777777763            221 12222 34444444


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|++|.+.|.
T Consensus        96 ~g~G~d~vi~~~g~  109 (176)
T d1d1ta2          96 TGNNVGYTFEVIGH  109 (176)
T ss_dssp             HTSCCCEEEECSCC
T ss_pred             ccccceEEEEeCCc
Confidence              479999998885

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.11  E-value=0.048  Score=45.91  Aligned_cols=76  Identities=14%  Similarity=0.059  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~al   79 (427)
                      +..+|+|.|+ |.+|...++.+...|. +|++++++.++++.....|.+.            ++...-.|  .+......
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~------------~i~~~~~d~~~~~~~~~~   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE------------CLNPKDYDKPIYEVICEK   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE------------EECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcE------------EEcCCCchhHHHHHHHHh
Confidence            3458999997 9999999999999995 7999999998887777777762            22211122  23333333


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|++|-++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence              369999998875

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.11  E-value=0.023  Score=47.13  Aligned_cols=35  Identities=31%  Similarity=0.315  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPEL   38 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~   38 (427)
                      |++|.|+|+||.||...+.-+.+.  .|+|.+++-+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            579999999999999999999876  49999998544

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=95.03  E-value=0.036  Score=46.81  Aligned_cols=76  Identities=14%  Similarity=0.071  Sum_probs=54.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC--HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS--AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D--~~sl~~al   79 (427)
                      +..+|+|+|+ |.+|...+..+...|. .|++.++++.+++.....|...            ++...-.|  ...+.+..
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~------------~i~~~~~~~~~~~~~~~~   94 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATD------------CLNPRELDKPVQDVITEL   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE------------EECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCc------------ccCCccchhhhhhhHhhh
Confidence            3458999986 9999999999999997 6888889888877666666652            22222222  23333333


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|+||.++|.
T Consensus        95 ~~~G~d~vie~~G~  108 (174)
T d1e3ia2          95 TAGGVDYSLDCAGT  108 (174)
T ss_dssp             HTSCBSEEEESSCC
T ss_pred             hcCCCcEEEEeccc
Confidence              479999999985

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.97  E-value=0.02  Score=44.99  Aligned_cols=36  Identities=17%  Similarity=0.156  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .+++|+|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            4579999998 99999999999999999999998864

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.87  E-value=0.021  Score=48.81  Aligned_cols=33  Identities=21%  Similarity=0.341  Sum_probs=28.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPE   37 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~   37 (427)
                      |-+|.|-| .|.||+.+++.|+.++ .+|+++...
T Consensus         1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            45899999 6999999999999875 899888643

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.72  E-value=0.025  Score=44.98  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ..++|+|.|| |++|..++..|.++|.+|+.+.|++.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3578999998 99999999999999999999998875

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=94.68  E-value=0.016  Score=49.56  Aligned_cols=46  Identities=20%  Similarity=0.189  Sum_probs=36.3

Q ss_pred             CEEEE-EcCCcHHHHHHHHHHHHCCCeEEEEecCcchHH----HHHHHHhh
Q 044905            5 GTVFV-AGATGQAGVRIAQTLLREGFSVRAGVPELGAAQ----ELARLAAS   50 (427)
Q Consensus         5 ~kIlI-tGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~----~l~~~~~~   50 (427)
                      .+|+| .||+|.+|...++.+...|++|++++|+.+..+    .+...|.+
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad   80 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT   80 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence            46777 589999999999999999999999998876543    34455655

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.61  E-value=0.021  Score=48.92  Aligned_cols=64  Identities=22%  Similarity=0.282  Sum_probs=49.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      ..++|.|.|. |.||+.+++.|..-|.+|++.+|++....                          ..-.+++.+++..+
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~--------------------------~~~~~~l~ell~~s   93 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP--------------------------WRFTNSLEEALREA   93 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS--------------------------SCCBSCSHHHHTTC
T ss_pred             cCceEEEecc-ccccccceeeeeccccccccccccccccc--------------------------eeeeechhhhhhcc
Confidence            4578999997 99999999999999999999998764210                          01112467889999


Q ss_pred             CEEEEccCCCC
Q 044905           83 GKVVVTIGPTE   93 (427)
Q Consensus        83 d~Vi~~ag~~~   93 (427)
                      |+|++++....
T Consensus        94 Div~~~~pl~~  104 (181)
T d1qp8a1          94 RAAVCALPLNK  104 (181)
T ss_dssp             SEEEECCCCST
T ss_pred             chhhccccccc
Confidence            99998776543

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.53  E-value=0.029  Score=48.59  Aligned_cols=65  Identities=17%  Similarity=0.086  Sum_probs=47.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|.|.|- |.||+.+++.|..-|.+|++.++.......  ..+                     ...+++.+++..+|
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~--~~~---------------------~~~~~l~~~l~~sD   98 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELE--KKG---------------------YYVDSLDDLYKQAD   98 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTT---------------------CBCSCHHHHHHHCS
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcccccccCcccccccc--cce---------------------eeeccccccccccc
Confidence            468999996 999999999999999999999877643211  111                     11234667788899


Q ss_pred             EEEEccCCC
Q 044905           84 KVVVTIGPT   92 (427)
Q Consensus        84 ~Vi~~ag~~   92 (427)
                      +|+.++..+
T Consensus        99 ii~~~~plt  107 (197)
T d1j4aa1          99 VISLHVPDV  107 (197)
T ss_dssp             EEEECSCCC
T ss_pred             cccccCCcc
Confidence            998877654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.46  E-value=0.026  Score=44.59  Aligned_cols=36  Identities=17%  Similarity=0.188  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ++++|+|.|| |++|-.++..|.+.|.+|+++.|...
T Consensus        21 ~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          21 ESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            4679999998 99999999999999999999998753

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.44  E-value=0.052  Score=46.67  Aligned_cols=75  Identities=24%  Similarity=0.214  Sum_probs=53.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC---HHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS---AESIAKA   78 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D---~~sl~~a   78 (427)
                      +..+|+|+|+ |.+|...+..+...|. .|+++++++++++.....+..             .+. |..+   .+.+.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~-------------~~~-~~~~~~~~~~i~~~   89 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-------------IAD-LSLDTPLHEQIAAL   89 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-------------EEE-TTSSSCHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhcccc-------------EEE-eCCCcCHHHHHHHH
Confidence            3468999997 9999888888888885 788889998887766666654             222 3222   2344444


Q ss_pred             hc--CcCEEEEccCCC
Q 044905           79 IG--NAGKVVVTIGPT   92 (427)
Q Consensus        79 l~--g~d~Vi~~ag~~   92 (427)
                      ..  ++|++|.+.|..
T Consensus        90 t~g~g~D~vid~vG~~  105 (195)
T d1kola2          90 LGEPEVDCAVDAVGFE  105 (195)
T ss_dssp             HSSSCEEEEEECCCTT
T ss_pred             hCCCCcEEEEECcccc
Confidence            44  589999999854

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.39  E-value=0.034  Score=44.14  Aligned_cols=36  Identities=22%  Similarity=0.251  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ..++|+|.|| |++|..++..|.+.|.+|+++.|.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4568999998 99999999999999999999988764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.31  E-value=0.032  Score=44.29  Aligned_cols=36  Identities=17%  Similarity=0.156  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .+++++|.|| |++|-.++..|.+.|.+|+.+.|++.
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            4579999998 99999999999999999999998764

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.26  E-value=0.029  Score=48.44  Aligned_cols=68  Identities=22%  Similarity=0.225  Sum_probs=48.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|.|.|. |.||+.+++.|..-|.+|.+.++........ ..+               +..     .+++.+++..+|
T Consensus        49 gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~---------------~~~-----~~~l~~ll~~sD  106 (193)
T d1mx3a1          49 GETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVER-ALG---------------LQR-----VSTLQDLLFHSD  106 (193)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHH-HHT---------------CEE-----CSSHHHHHHHCS
T ss_pred             CceEEEecc-ccccccceeeeeccccceeeccCcccccchh-hhc---------------ccc-----ccchhhccccCC
Confidence            468999997 9999999999999999999999876532111 111               111     224566788899


Q ss_pred             EEEEccCCCC
Q 044905           84 KVVVTIGPTE   93 (427)
Q Consensus        84 ~Vi~~ag~~~   93 (427)
                      +|+.+.....
T Consensus       107 ~i~~~~plt~  116 (193)
T d1mx3a1         107 CVTLHCGLNE  116 (193)
T ss_dssp             EEEECCCCCT
T ss_pred             EEEEeecccc
Confidence            9988776543

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.13  E-value=0.041  Score=43.39  Aligned_cols=36  Identities=25%  Similarity=0.221  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      -+++|+|.|| |+||-.++..|.+.|.+|+.+.|+..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            4578999998 99999999999999999999998764

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.13  E-value=0.0072  Score=51.41  Aligned_cols=42  Identities=21%  Similarity=0.340  Sum_probs=35.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHH
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELAR   46 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~   46 (427)
                      ..++|+|+|+ |..++.++..|...| +|+++.|+.++++.+..
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~   58 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAK   58 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHH
Confidence            4578999997 889999999997767 99999999988776654

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.07  E-value=0.041  Score=46.54  Aligned_cols=32  Identities=22%  Similarity=0.347  Sum_probs=27.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEec
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVP   36 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R   36 (427)
                      |.+|.|-| .|.||+.+++.|+.++ .+|+++.-
T Consensus         1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence            66899998 6999999999998886 77877763

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.97  E-value=0.042  Score=43.08  Aligned_cols=36  Identities=22%  Similarity=0.083  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      -+++|+|.|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus        20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          20 LPERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            3578999998 99999999999999999999998764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.97  E-value=0.034  Score=44.13  Aligned_cols=35  Identities=26%  Similarity=0.302  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      .+++++|.|| |+||-.++..|.+.|.+|+++.|+.
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            3568999998 9999999999999999999999863

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=93.88  E-value=0.024  Score=47.67  Aligned_cols=35  Identities=11%  Similarity=0.213  Sum_probs=28.7

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEecC
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLRE-GFSVRAGVPE   37 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~-G~~V~al~R~   37 (427)
                      |.+.+|.|.|. |++|+.+++.|.+. +++++++...
T Consensus         1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~   36 (170)
T d1f06a1           1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSR   36 (170)
T ss_dssp             CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEec
Confidence            56678999995 99999999999886 5888876643

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.82  E-value=0.036  Score=43.35  Aligned_cols=36  Identities=17%  Similarity=0.184  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .+++++|.|| |++|-.++..|.+.|++|+++.|.+.
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            4578999998 99999999999999999999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.81  E-value=0.053  Score=46.37  Aligned_cols=69  Identities=10%  Similarity=-0.039  Sum_probs=49.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|.|.|. |.||+.|++.|..-|.+|.+.+|...........+.                    ....++.++++.+|
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~--------------------~~~~~l~~~l~~sD  102 (188)
T d2naca1          44 AMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNL--------------------TWHATREDMYPVCD  102 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTC--------------------EECSSHHHHGGGCS
T ss_pred             ccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccc--------------------cccCCHHHHHHhcc
Confidence            468999996 999999999999999999999987653322222111                    11234567799999


Q ss_pred             EEEEccCCCC
Q 044905           84 KVVVTIGPTE   93 (427)
Q Consensus        84 ~Vi~~ag~~~   93 (427)
                      +|+.+...+.
T Consensus       103 ~v~~~~plt~  112 (188)
T d2naca1         103 VVTLNCPLHP  112 (188)
T ss_dssp             EEEECSCCCT
T ss_pred             chhhcccccc
Confidence            9988776554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.78  E-value=0.04  Score=47.83  Aligned_cols=34  Identities=35%  Similarity=0.496  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      .++|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            357999998 9999999999999999999999864

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.028  Score=41.30  Aligned_cols=36  Identities=25%  Similarity=0.161  Sum_probs=32.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcch
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGA   40 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~   40 (427)
                      +++|.|.|+ |.+|+-++....+-|++|++++.+++.
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~   36 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP   36 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence            579999997 999999999999999999999987653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.75  E-value=0.05  Score=45.23  Aligned_cols=97  Identities=11%  Similarity=0.088  Sum_probs=56.4

Q ss_pred             CCEEEEEcCCcHHHHH-HHHHHHHC-CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVR-IAQTLLRE-GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~-lv~~LL~~-G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +++|.|+|+ |.+|+. .+..|... ++++.++++++.++..+......            ..+..|+   +.+.+  .+
T Consensus         1 tirvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~------------~~~~~~~---~~ll~--~~   62 (167)
T d1xeaa1           1 SLKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRV------------SATCTDY---RDVLQ--YG   62 (167)
T ss_dssp             CEEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTC------------CCCCSST---TGGGG--GC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccc------------ccccccH---HHhcc--cc
Confidence            368999997 888865 56666555 47888777887766555432110            0112222   22221  36


Q ss_pred             cCEEEEccCCCCC----------C------CCccccHHHHHHHHHHHHHcCCC
Q 044905           82 AGKVVVTIGPTED----------G------PTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        82 ~d~Vi~~ag~~~~----------~------~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +|+|+.+..+...          +      .....+...+..|++++++.|+.
T Consensus        63 iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~  115 (167)
T d1xeaa1          63 VDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP  115 (167)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred             cceecccccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence            7888776544221          0      02345566777788888777764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.71  E-value=0.043  Score=47.19  Aligned_cols=69  Identities=13%  Similarity=0.072  Sum_probs=49.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|.|.|. |.||+.+++.|..-|.+|.+.++............               .+.     .+++.+++..+|
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~---------------~~~-----~~~l~~ll~~sD  105 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ---------------ATF-----HDSLDSLLSVSQ  105 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT---------------CEE-----CSSHHHHHHHCS
T ss_pred             ccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc---------------ccc-----cCCHHHHHhhCC
Confidence            478999997 99999999999999999999988765332221111               111     124667888999


Q ss_pred             EEEEccCCCC
Q 044905           84 KVVVTIGPTE   93 (427)
Q Consensus        84 ~Vi~~ag~~~   93 (427)
                      +|+.+...+.
T Consensus       106 ~v~l~~plt~  115 (191)
T d1gdha1         106 FFSLNAPSTP  115 (191)
T ss_dssp             EEEECCCCCT
T ss_pred             eEEecCCCCc
Confidence            9988776543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.48  E-value=0.043  Score=43.38  Aligned_cols=34  Identities=24%  Similarity=0.397  Sum_probs=31.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ++|+|.|| |++|-.++..|.+.|++|+++.|++.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            68999998 99999999999999999999998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.44  E-value=0.054  Score=43.53  Aligned_cols=36  Identities=19%  Similarity=0.292  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ..++|+|.|| |++|-.++..|.+.|.+|+.+.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            3578999998 99999999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.059  Score=42.77  Aligned_cols=35  Identities=23%  Similarity=0.238  Sum_probs=32.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      +++++|.|| |++|-.++..|.+.|.+|+.+.|+..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            578999998 99999999999999999999999763

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.30  E-value=0.23  Score=41.09  Aligned_cols=76  Identities=14%  Similarity=0.139  Sum_probs=53.2

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEe-cCCC-HHHHHHHh
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVES-NFDS-AESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~g-Dl~D-~~sl~~al   79 (427)
                      +..+|+|+|+ |.+|...+..+...| ..|+++++++++++.....|.+.            ++.. +-.+ ...+....
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~------------~in~~~~~~~~~~~~~~~   94 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD------------FVNPNDHSEPISQVLSKM   94 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE------------EECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcE------------EEcCCCcchhHHHHHHhh
Confidence            4468999997 567777777777776 57999999999888888888762            2321 1111 23444443


Q ss_pred             --cCcCEEEEccCC
Q 044905           80 --GNAGKVVVTIGP   91 (427)
Q Consensus        80 --~g~d~Vi~~ag~   91 (427)
                        .++|++|-+.|.
T Consensus        95 ~~~G~d~vid~~G~  108 (175)
T d1cdoa2          95 TNGGVDFSLECVGN  108 (175)
T ss_dssp             HTSCBSEEEECSCC
T ss_pred             ccCCcceeeeecCC
Confidence              479999999985

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.10  E-value=0.087  Score=44.07  Aligned_cols=66  Identities=23%  Similarity=0.172  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++++|+| .|.+|+.+++.|...|.+|++...+|-+  .++...--           +.+        ..+.+++..+|
T Consensus        24 Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~--al~A~~dG-----------~~v--------~~~~~a~~~ad   81 (163)
T d1li4a1          24 GKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPIN--ALQAAMEG-----------YEV--------TTMDEACQEGN   81 (163)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH--HHHHHHTT-----------CEE--------CCHHHHTTTCS
T ss_pred             CCEEEEec-cccccHHHHHHHHhCCCeeEeeecccch--hHHhhcCc-----------eEe--------eehhhhhhhcc
Confidence            46888988 5999999999999999999999999754  23222111           111        13567788899


Q ss_pred             EEEEccCC
Q 044905           84 KVVVTIGP   91 (427)
Q Consensus        84 ~Vi~~ag~   91 (427)
                      ++|.+.|.
T Consensus        82 ivvtaTGn   89 (163)
T d1li4a1          82 IFVTTTGC   89 (163)
T ss_dssp             EEEECSSC
T ss_pred             EEEecCCC
Confidence            99998885

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.06  E-value=0.043  Score=45.51  Aligned_cols=36  Identities=22%  Similarity=0.259  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~   39 (427)
                      |++|.|+|+||.||...+.-+.+.  .|+|.+++-+..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N   38 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKN   38 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence            678999999999999999988886  489999985443

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.94  E-value=0.047  Score=43.24  Aligned_cols=36  Identities=22%  Similarity=0.164  Sum_probs=33.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      -+++++|.|| |++|-.++..|.+.|.+|+++.|++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4578999998 99999999999999999999998875

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=92.93  E-value=0.16  Score=41.74  Aligned_cols=93  Identities=16%  Similarity=0.158  Sum_probs=54.6

Q ss_pred             CCEEEEEcCCcHHHHH-HHHHHHHC-CCeEEEEe-cCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            4 SGTVFVAGATGQAGVR-IAQTLLRE-GFSVRAGV-PELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         4 ~~kIlItGATG~iG~~-lv~~LL~~-G~~V~al~-R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      +++|.|.|+ |.+|+. .+..|... +++++++. +++.++..+... +..                 -.++.+.   ++
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~-----------------~~~~~~~---l~   59 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIP-----------------YADSLSS---LA   59 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCC-----------------BCSSHHH---HH
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccccc-----------------ccccchh---hh
Confidence            358999995 999976 46666554 68888765 666665554321 111                 1223333   35


Q ss_pred             cCcCEEEEccCCCCC----------C------CCccccHHHHHHHHHHHHHcCC
Q 044905           80 GNAGKVVVTIGPTED----------G------PTSEVSTSDAFQVIQAAQLAGV  117 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~----------~------~~~~vn~~~~~~ll~Aa~~~gV  117 (427)
                      .++|+|+.+..+...          +      ...-.+...+..|++++++.|+
T Consensus        60 ~~~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~  113 (164)
T d1tlta1          60 ASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL  113 (164)
T ss_dssp             TTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred             hhcccccccccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence            688998876654321          0      0233455566667777776665

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=92.91  E-value=0.21  Score=41.89  Aligned_cols=100  Identities=20%  Similarity=0.215  Sum_probs=55.0

Q ss_pred             CCCCEEEEEcCCcHHHHH-HHHHHHHCC--CeEEEE-ecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHH
Q 044905            2 KDSGTVFVAGATGQAGVR-IAQTLLREG--FSVRAG-VPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAK   77 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~-lv~~LL~~G--~~V~al-~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~   77 (427)
                      |.+.+|.|.|+ |.+|+. .+..+.+.+  ++|+++ +|++++++.+......            ..+   ++|.+.+.+
T Consensus         1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~------------~~~---~~~~~ell~   64 (181)
T d1zh8a1           1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGN------------PAV---FDSYEELLE   64 (181)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSS------------CEE---ESCHHHHHH
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccc------------cce---eeeeecccc
Confidence            55668999995 999986 466666543  678766 4665555544332111            012   234333321


Q ss_pred             HhcCcCEEEEccCCCCC----------C------CCccccHHHHHHHHHHHHHcCCC
Q 044905           78 AIGNAGKVVVTIGPTED----------G------PTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        78 al~g~d~Vi~~ag~~~~----------~------~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                       -.++|+|+.+..+...          +      -..-.+......|++++++.++.
T Consensus        65 -~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~  120 (181)
T d1zh8a1          65 -SGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT  120 (181)
T ss_dssp             -SSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred             -ccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence             1357888876654221          0      02334555666666666666654

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=92.90  E-value=0.052  Score=44.04  Aligned_cols=85  Identities=16%  Similarity=0.177  Sum_probs=53.7

Q ss_pred             CCCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh
Q 044905            3 DSGTVFVAGAT---GQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI   79 (427)
Q Consensus         3 ~~~kIlItGAT---G~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al   79 (427)
                      ++++|+|.|||   +..|..+++.|++.||.++.+.-++.. ..+.  +.              -+.-++      ...-
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i~--g~--------------~~~~~l------~~i~   68 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EELF--GE--------------EAVASL------LDLK   68 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEET--TE--------------ECBSSG------GGCC
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-ceee--ce--------------ecccch------hhcc
Confidence            36789999998   579999999999999999877644321 1110  00              111122      1222


Q ss_pred             cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           80 GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        80 ~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                      ...|.|+.+..+.           .+..+++.|.+.|++.++
T Consensus        69 ~~iD~v~v~~p~~-----------~v~~~v~~~~~~g~k~i~   99 (136)
T d1iuka_          69 EPVDILDVFRPPS-----------ALMDHLPEVLALRPGLVW   99 (136)
T ss_dssp             SCCSEEEECSCHH-----------HHTTTHHHHHHHCCSCEE
T ss_pred             CCCceEEEeccHH-----------HHHHHHHHHHhhCCCeEE
Confidence            4578888766431           334577777788887665

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.89  E-value=0.078  Score=45.16  Aligned_cols=67  Identities=27%  Similarity=0.241  Sum_probs=48.7

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .+++.|.|. |.||+.+++.|..-|.+|.+.+|........ ..+.+               .      .++.+++..+|
T Consensus        44 ~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~~~~~---------------~------~~l~ell~~sD  100 (184)
T d1ygya1          44 GKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-QLGIE---------------L------LSLDDLLARAD  100 (184)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-HHTCE---------------E------CCHHHHHHHCS
T ss_pred             ceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh-hcCce---------------e------ccHHHHHhhCC
Confidence            468999996 9999999999999999999999876543221 11111               1      13556788899


Q ss_pred             EEEEccCCCC
Q 044905           84 KVVVTIGPTE   93 (427)
Q Consensus        84 ~Vi~~ag~~~   93 (427)
                      +|+.+...+.
T Consensus       101 iv~~~~Plt~  110 (184)
T d1ygya1         101 FISVHLPKTP  110 (184)
T ss_dssp             EEEECCCCST
T ss_pred             EEEEcCCCCc
Confidence            9988776554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.82  E-value=0.039  Score=45.17  Aligned_cols=38  Identities=18%  Similarity=0.391  Sum_probs=33.4

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      +.+.++|+|+|| |.+|..-++.|++.|.+|+++....+
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~~   47 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLH   47 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            356789999998 99999999999999999999976543

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.75  E-value=0.61  Score=40.75  Aligned_cols=100  Identities=14%  Similarity=0.034  Sum_probs=62.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc-------------------hHHHHHHHHhhhhhhhhhhhccceE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG-------------------AAQELARLAASYKILSKEELKRLNA   64 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~-------------------~~~~l~~~~~~~~~~~~~~~~rl~v   64 (427)
                      .+|+|.|+ |.+|++++..|.+.|. ++++++.+.=                   +...+......       -.+.+++
T Consensus        31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~-------~np~~~i  102 (247)
T d1jw9b_          31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTR-------INPHIAI  102 (247)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH-------HCTTSEE
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHH-------hhcccch
Confidence            58999997 8899999999999996 7888774331                   11111111000       1233445


Q ss_pred             EEecC-CCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEE
Q 044905           65 VESNF-DSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAII  123 (427)
Q Consensus        65 v~gDl-~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~v  123 (427)
                      ...+. .+...+...+...|++|.+...      ..    .-..+-++|...+++ +|+.
T Consensus       103 ~~~~~~~~~~~~~~~~~~~divid~~d~------~~----~~~~in~~~~~~~ip-~i~g  151 (247)
T d1jw9b_         103 TPVNALLDDAELAALIAEHDLVLDCTDN------VA----VRNQLNAGCFAAKVP-LVSG  151 (247)
T ss_dssp             EEECSCCCHHHHHHHHHTSSEEEECCSS------HH----HHHHHHHHHHHHTCC-EEEE
T ss_pred             hhhhhhhhhccccccccccceeeeccch------hh----hhhhHHHHHHHhCCC-cccc
Confidence            44443 2455666778899999976532      11    234566788888876 4433

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.63  E-value=0.071  Score=46.65  Aligned_cols=36  Identities=19%  Similarity=0.206  Sum_probs=32.8

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ..++|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4679999998 99999999999999999999998753

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=92.55  E-value=0.0069  Score=49.91  Aligned_cols=64  Identities=16%  Similarity=0.057  Sum_probs=39.7

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcCEEE
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAGKVV   86 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d~Vi   86 (427)
                      |-+.|+ |.+|+++++.|.+.++.+.+..|++++++.+...+..              ...+.      .++++.+|+||
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~--------------~~~~~------~~~~~~~DiVi   60 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG--------------KAATL------EKHPELNGVVF   60 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC--------------CCCSS------CCCCC---CEE
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc--------------cccch------hhhhccCcEEE
Confidence            456775 9999999987755444446789999888888665432              11222      23567799999


Q ss_pred             EccCC
Q 044905           87 VTIGP   91 (427)
Q Consensus        87 ~~ag~   91 (427)
                      .+..+
T Consensus        61 l~v~d   65 (153)
T d2i76a2          61 VIVPD   65 (153)
T ss_dssp             ECSCT
T ss_pred             Eeccc
Confidence            98853

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.39  E-value=0.08  Score=42.12  Aligned_cols=36  Identities=17%  Similarity=0.244  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .+++++|.|| |++|-.++..|.+.|.+|+.+.|.+.
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            4578999998 99999999999999999999998764

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.10  E-value=0.12  Score=40.33  Aligned_cols=36  Identities=19%  Similarity=0.105  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      +.++|+|.|+ |++|-.++..|.+.|.+|+.+.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3578999998 99999999999999999999998764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=92.01  E-value=0.13  Score=44.43  Aligned_cols=67  Identities=19%  Similarity=0.182  Sum_probs=47.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHh-cC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAI-GN   81 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al-~g   81 (427)
                      +.++|+|-| .|.+|+++++.|.+.|.+|++.+.+..........+.+             .+     +.+   +++ ..
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~-------------~~-----~~~---~~~~~~   83 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHT-------------AV-----ALE---DVLSTP   83 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCE-------------EC-----CGG---GGGGCC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhccc-------------cc-----Ccc---cccccc
Confidence            347899998 59999999999999999999988887655444333322             11     111   234 47


Q ss_pred             cCEEEEccCC
Q 044905           82 AGKVVVTIGP   91 (427)
Q Consensus        82 ~d~Vi~~ag~   91 (427)
                      ||+++-|+..
T Consensus        84 ~DI~iPcA~~   93 (201)
T d1c1da1          84 CDVFAPCAMG   93 (201)
T ss_dssp             CSEEEECSCS
T ss_pred             ceeeeccccc
Confidence            9999988754

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.94  E-value=0.074  Score=44.48  Aligned_cols=35  Identities=26%  Similarity=0.295  Sum_probs=31.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~   39 (427)
                      .++|+|.|| |..|-..+..|.++|+ .|+++.|++.
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            579999998 9999999999999998 5999998765

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.91  E-value=0.15  Score=42.70  Aligned_cols=99  Identities=12%  Similarity=0.142  Sum_probs=56.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEE-ecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE-GFSVRAG-VPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~-G~~V~al-~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      .+|.|+|+ |.+|+..++.|... +++|+++ +++++++..+... +...         . .-+   +.|.+.+.+ -.+
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~---------~-~~~---~~~~~~ll~-~~~   66 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPE---------S-TKI---HGSYESLLE-DPE   66 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCT---------T-CEE---ESSHHHHHH-CTT
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhcccccc---------c-eee---cCcHHHhhh-ccc
Confidence            58999996 89999999999876 6888876 5666655444321 1100         0 011   234444332 235


Q ss_pred             cCEEEEccCCCCC----------------CCCccccHHHHHHHHHHHHHcCCC
Q 044905           82 AGKVVVTIGPTED----------------GPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        82 ~d~Vi~~ag~~~~----------------~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      +|+|+.+..+...                ......+...+..|++.+++.++.
T Consensus        67 iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~~  119 (184)
T d1ydwa1          67 IDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQ  119 (184)
T ss_dssp             CCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCC
T ss_pred             cceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCCE
Confidence            7888876543211                002334555666677777666653

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.89  E-value=0.28  Score=38.68  Aligned_cols=92  Identities=16%  Similarity=0.185  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcC----------CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC
Q 044905            2 KDSGTVFVAGA----------TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS   71 (427)
Q Consensus         2 ~~~~kIlItGA----------TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D   71 (427)
                      .+.++|+|+|+          --+.+.+.+++|.+.|++++.+..+|.....-           .+..++   +...--.
T Consensus         2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd-----------~d~aD~---lYfeplt   67 (121)
T d1a9xa4           2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTD-----------YDTSDR---LYFEPVT   67 (121)
T ss_dssp             SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTS-----------TTSSSE---EECCCCS
T ss_pred             CCCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcC-----------hhhcCc---eEEccCC
Confidence            36789999998          33889999999999999999999998753211           111223   3333334


Q ss_pred             HHHHHHHh--cCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCC
Q 044905           72 AESIAKAI--GNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVG  118 (427)
Q Consensus        72 ~~sl~~al--~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk  118 (427)
                      .+.+.+.+  +..|.|+...|.-           -++|+...+.+.|++
T Consensus        68 ~e~v~~Ii~~E~p~~ii~~~GGQ-----------talnla~~L~~~gv~  105 (121)
T d1a9xa4          68 LEDVLEIVRIEKPKGVIVQYGGQ-----------TPLKLARALEAAGVP  105 (121)
T ss_dssp             HHHHHHHHHHHCCSEEECSSSTH-----------HHHTTHHHHHHTTCC
T ss_pred             HHHHHHHHHHhCCCEEEeehhhh-----------hHHHHHHHHHHcCCc
Confidence            56666655  4789998877741           345666677788885

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=91.88  E-value=0.03  Score=44.86  Aligned_cols=90  Identities=12%  Similarity=0.084  Sum_probs=55.4

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-Cc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLR-EGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIG-NA   82 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~-~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-g~   82 (427)
                      .+|+|.|| |.+|+.|++.+.. .||+++++.-+......     ..        ..++.+.  +.   +.+.+... ..
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G-----~~--------I~Gi~V~--~~---~~l~~~~~~~i   64 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVG-----RP--------VRGGVIE--HV---DLLPQRVPGRI   64 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTT-----CE--------ETTEEEE--EG---GGHHHHSTTTC
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcC-----CE--------ECCEEEe--cH---HHHHHHHhhcc
Confidence            37999998 9999999998754 47999888765432110     00        1122233  22   23444443 35


Q ss_pred             CEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           83 GKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        83 d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      +.++.++..           .....+++.|.++|++.+.-++
T Consensus        65 ~iai~~i~~-----------~~~~~I~d~l~~~gIk~I~~f~   95 (126)
T d2dt5a2          65 EIALLTVPR-----------EAAQKAADLLVAAGIKGILNFA   95 (126)
T ss_dssp             CEEEECSCH-----------HHHHHHHHHHHHHTCCEEEECS
T ss_pred             cEEEEeCCH-----------HHHHHHHHHHHHcCCCEEeecC
Confidence            555554432           2456788999999999876444

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.61  E-value=0.077  Score=46.92  Aligned_cols=31  Identities=26%  Similarity=0.196  Sum_probs=29.3

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |+|+|| |.+|..++.+|.++|++|+++.++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999998 9999999999999999999999864

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.35  E-value=0.11  Score=43.18  Aligned_cols=76  Identities=14%  Similarity=0.041  Sum_probs=45.5

Q ss_pred             CEEEEEcCCcHHHHHHHHHHH-H-C----CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLL-R-E----GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL-~-~----G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |||.|.|| |.+|..++-..+ . .    +.+++.++.+++++.......-.      .-.....+.. . ++   ..++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~------~~~~~~~~~~-t-~~---~~~~   68 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKR------LVKDRFKVLI-S-DT---FEGA   68 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHH------HHTTSSEEEE-C-SS---HHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHh------hhccCceEEE-e-cC---cccc
Confidence            68999998 667766554333 2 1    36899999998765433221111      0011222222 2 22   2467


Q ss_pred             hcCcCEEEEccCCC
Q 044905           79 IGNAGKVVVTIGPT   92 (427)
Q Consensus        79 l~g~d~Vi~~ag~~   92 (427)
                      +.++|+||.+++..
T Consensus        69 l~~aDvVVita~~~   82 (162)
T d1up7a1          69 VVDAKYVIFQFRPG   82 (162)
T ss_dssp             HTTCSEEEECCCTT
T ss_pred             cCCCCEEEEecccC
Confidence            89999999999864

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=91.28  E-value=0.3  Score=45.58  Aligned_cols=78  Identities=15%  Similarity=0.127  Sum_probs=56.2

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHH-CC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLR-EG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~-~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      +++.+++.|+|+ |.++..-++.+.+ .+ -+|++.+|++.+...+......        ..++++..++     ++.++
T Consensus       125 ~~da~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~--------~~g~~v~~~~-----s~~ea  190 (340)
T d1x7da_         125 RPNARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE--------YSGLTIRRAS-----SVAEA  190 (340)
T ss_dssp             CTTCCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT--------CTTCEEEECS-----SHHHH
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhh--------ccCCCceecC-----CHHHH
Confidence            467789999996 9999988887766 45 6899999999876655443222        1234455554     36788


Q ss_pred             hcCcCEEEEccCCC
Q 044905           79 IGNAGKVVVTIGPT   92 (427)
Q Consensus        79 l~g~d~Vi~~ag~~   92 (427)
                      ++++|+|+.+.+..
T Consensus       191 v~~ADIi~t~Tas~  204 (340)
T d1x7da_         191 VKGVDIITTVTADK  204 (340)
T ss_dssp             HTTCSEEEECCCCS
T ss_pred             HhcCCceeeccccC
Confidence            99999999877543

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=91.16  E-value=0.14  Score=42.42  Aligned_cols=35  Identities=20%  Similarity=0.252  Sum_probs=24.6

Q ss_pred             CCEEEEEcCCcHHHHHHH-HHHHHC-CCeEEEEe-cCcc
Q 044905            4 SGTVFVAGATGQAGVRIA-QTLLRE-GFSVRAGV-PELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv-~~LL~~-G~~V~al~-R~~~   39 (427)
                      +.+|.|.| ||.+|+.+. +.|... ..+++++. |++.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~   41 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA   41 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence            45899999 799998654 554444 36888875 5554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.16  E-value=0.19  Score=41.96  Aligned_cols=35  Identities=20%  Similarity=0.147  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecC
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPE   37 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~   37 (427)
                      ..++|+|.|-|..+|+.|+..|.++|++|+...+.
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~   70 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF   70 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhccccccccc
Confidence            45789999999999999999999999999877544

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.16  E-value=0.12  Score=47.56  Aligned_cols=36  Identities=25%  Similarity=0.339  Sum_probs=32.4

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .+++|+|.|| |..|..++..|.++|++|.++-++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            3679999998 99999999999999999999988764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.09  E-value=0.056  Score=46.72  Aligned_cols=35  Identities=29%  Similarity=0.131  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .++|.|.|. |.||+.+++.|..-|.+|++.++...
T Consensus        45 ~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          45 QQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            368999996 99999999999999999999998754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=90.99  E-value=0.093  Score=45.77  Aligned_cols=33  Identities=24%  Similarity=0.260  Sum_probs=30.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |+|+|+|| |..|-..+..|.++|++|+++-+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            67999998 9999999999999999999998765

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.92  E-value=0.26  Score=41.28  Aligned_cols=36  Identities=17%  Similarity=0.198  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      ..++|+|.|.|..+|+.|+..|+++|..|+.+....
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t   73 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT   73 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence            357899999999999999999999999999877543

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.76  E-value=0.11  Score=46.15  Aligned_cols=35  Identities=29%  Similarity=0.346  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      .+++|+|+|| |..|-..+..|.++|++|+++-++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999998 9999999999999999999998765

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.65  E-value=0.19  Score=40.16  Aligned_cols=76  Identities=21%  Similarity=0.201  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcC----------CcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCC
Q 044905            2 KDSGTVFVAGA----------TGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDS   71 (427)
Q Consensus         2 ~~~~kIlItGA----------TG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D   71 (427)
                      .+.++|+|+|+          --+.+.+.+++|.+.|++++.+..+|.....-           .+..+   -+...--.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd-----------~d~aD---~lYfePlt   70 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD-----------PEMAD---ATYIEPIH   70 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC-----------GGGSS---EEECSCCC
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC-----------hhhcc---eeeeecCC
Confidence            46689999998          45789999999999999999999998753211           01122   34444445


Q ss_pred             HHHHHHHhc--CcCEEEEccCC
Q 044905           72 AESIAKAIG--NAGKVVVTIGP   91 (427)
Q Consensus        72 ~~sl~~al~--g~d~Vi~~ag~   91 (427)
                      .+.+.+.++  ..|.|+...|.
T Consensus        71 ~e~v~~Ii~~E~pd~il~~~GG   92 (127)
T d1a9xa3          71 WEVVRKIIEKERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHHHCCSEEECSSSH
T ss_pred             HHHHHHHHHHhCcCCeEEEeee
Confidence            677777764  78999887763

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.59  E-value=0.32  Score=39.34  Aligned_cols=37  Identities=16%  Similarity=-0.005  Sum_probs=30.1

Q ss_pred             CCCEEEEEc-CCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAG-ATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItG-ATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ..+.++|.+ +.||+|..++..|.+.|++|+.+.+.+.
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            344566652 3499999999999999999999999864

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=90.41  E-value=0.13  Score=44.61  Aligned_cols=33  Identities=33%  Similarity=0.310  Sum_probs=30.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |+|+|+|| |..|-..+..|.++|++|+++-+++
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            78999998 9999999999999999999998764

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=90.23  E-value=0.71  Score=39.35  Aligned_cols=96  Identities=21%  Similarity=0.221  Sum_probs=62.0

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEe--------------
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVES--------------   67 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~g--------------   67 (427)
                      ++|.|.|- |..|..++.+|.+.|   .+.+++.-+.+.   |.......           .+..+              
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~---L~~~~a~~-----------ki~iG~~~t~G~G~g~~p~   65 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQV---LEASNADV-----------KIQIGENITRGLGAGGRPE   65 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHH---HHTCCCSE-----------EEECCTTTTTTSCCTTCHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHH---HhcCCcce-----------EEecccccCCCcccccCch
Confidence            47999997 999999999999976   455666655432   32111110           01111              


Q ss_pred             -----cCCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeE
Q 044905           68 -----NFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV  120 (427)
Q Consensus        68 -----Dl~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~  120 (427)
                           -..+.+.+.+.++++|.||.++|....     .-.-.+--+.+.|++.|+--+
T Consensus        66 ~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGg-----TGtgaapviA~~ake~g~lvv  118 (194)
T d1w5fa1          66 IGEQAALESEEKIREVLQDTHMVFITAGFGGG-----TGTGASPVIAKIAKEMGILTV  118 (194)
T ss_dssp             HHHHHHHHTHHHHHHHTTTCSEEEEEEETTSS-----HHHHHHHHHHHHHHHTTCEEE
T ss_pred             hhHhHHHHHHHHHHHHhcCCCeEEEEEecCCC-----cccchHHHHHHHHHHcCCceE
Confidence                 112467788889999999999987542     112244567899999886433

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.02  E-value=0.13  Score=43.87  Aligned_cols=65  Identities=12%  Similarity=0.091  Sum_probs=47.6

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++|.|.|. |.||+.+++.|..-|.+|++.++.......      .             ....     +++.+++..+|
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~------~-------------~~~~-----~~l~ell~~sD   98 (188)
T d1sc6a1          44 GKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG------N-------------ATQV-----QHLSDLLNMSD   98 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT------T-------------CEEC-----SCHHHHHHHCS
T ss_pred             ceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh------h-------------hhhh-----hhHHHHHhhcc
Confidence            468999985 999999999999999999999986542110      0             1111     24567788899


Q ss_pred             EEEEccCCCC
Q 044905           84 KVVVTIGPTE   93 (427)
Q Consensus        84 ~Vi~~ag~~~   93 (427)
                      +|++++..+.
T Consensus        99 ii~i~~plt~  108 (188)
T d1sc6a1          99 VVSLHVPENP  108 (188)
T ss_dssp             EEEECCCSST
T ss_pred             ceeecccCCc
Confidence            9988876554

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.75  E-value=0.22  Score=42.02  Aligned_cols=36  Identities=25%  Similarity=0.250  Sum_probs=32.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .+++|+|.|| |..|-.-+..|.++||+|+++.+++.
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            4578999998 99999999999999999999998764

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.53  E-value=0.85  Score=37.72  Aligned_cols=113  Identities=10%  Similarity=-0.059  Sum_probs=60.2

Q ss_pred             CCEEEEEcC-CcHHHHHHHHHHHHCC----CeEEEEecCcch--HHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            4 SGTVFVAGA-TGQAGVRIAQTLLREG----FSVRAGVPELGA--AQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         4 ~~kIlItGA-TG~iG~~lv~~LL~~G----~~V~al~R~~~~--~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      .+||.|.|| +.+.+..++..++...    -++..++.+++.  ++.+......+     ....++.+.....+|.   .
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~-----~~~~~~~~~~~~~td~---~   72 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRM-----VEKAGVPIEIHLTLDR---R   72 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHH-----HHHTTCCCEEEEESCH---H
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHH-----HHhcCCCceeeecCCc---h
Confidence            368999997 2244455555554432    488888887754  22221111100     0011222333333443   4


Q ss_pred             HHhcCcCEEEEccCCCCCCC-------------------------CccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           77 KAIGNAGKVVVTIGPTEDGP-------------------------TSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~~~~~-------------------------~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++++++|+||++++......                         ...-|+.....+++.+.+..-.-++++.
T Consensus        73 ~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~v  145 (169)
T d1s6ya1          73 RALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINF  145 (169)
T ss_dssp             HHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             hhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEe
Confidence            57899999999998653200                         0012334456667777777666565554

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=89.51  E-value=0.54  Score=40.14  Aligned_cols=36  Identities=22%  Similarity=0.263  Sum_probs=30.1

Q ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      .++|+|+++|. +..+..+++.|++.|++|.++...+
T Consensus         1 ~~~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           1 SESLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCCCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            36889999985 7889999999999999988776443

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.20  E-value=0.18  Score=40.87  Aligned_cols=35  Identities=23%  Similarity=0.298  Sum_probs=30.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~   39 (427)
                      -++|+|.|| |++|-.++..|.+.|  .+|+++.+++.
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~~   38 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNTD   38 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCCc
Confidence            479999998 999999999999987  47888887763

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.11  E-value=0.26  Score=42.79  Aligned_cols=36  Identities=25%  Similarity=0.498  Sum_probs=32.6

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      ..++|+|.|| |..|-..+..|.++|++|+++.++..
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            4578999998 99999999999999999999987664

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.03  E-value=0.76  Score=39.24  Aligned_cols=33  Identities=18%  Similarity=0.161  Sum_probs=27.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |+|+++|. +..|..+++.|++.|++|.++.-.+
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~   33 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHT   33 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            68999975 6689999999999999998877443

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=88.90  E-value=0.93  Score=37.54  Aligned_cols=81  Identities=15%  Similarity=0.130  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCcHHHHH-HHHHHHHC-----CCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHH
Q 044905            3 DSGTVFVAGATGQAGVR-IAQTLLRE-----GFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIA   76 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~-lv~~LL~~-----G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~   76 (427)
                      ...||.|.|| |.+|.. ++..|+..     +-+|+.++.++++++........   ........+++....  |   ..
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--d---~~   72 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDV---FIREKAPDIEFAATT--D---PE   72 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHH---HHHHHCTTSEEEEES--C---HH
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHH---HHHHhCCCcceEecC--C---hh
Confidence            4568999998 556654 44555543     24899999998765422211111   001111122233221  2   35


Q ss_pred             HHhcCcCEEEEccCCC
Q 044905           77 KAIGNAGKVVVTIGPT   92 (427)
Q Consensus        77 ~al~g~d~Vi~~ag~~   92 (427)
                      ++++++|+||.++|..
T Consensus        73 eal~~AD~Vvitag~~   88 (167)
T d1u8xx1          73 EAFTDVDFVMAHIRVG   88 (167)
T ss_dssp             HHHSSCSEEEECCCTT
T ss_pred             hccCCCCEEEECCCcC
Confidence            6899999999999874

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.83  E-value=0.19  Score=45.11  Aligned_cols=33  Identities=21%  Similarity=0.404  Sum_probs=29.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~   38 (427)
                      +.|+|+|| |-+|..++.+|.++|+ +|+++.|+.
T Consensus         2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            47999998 9999999999999996 699998864

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.73  E-value=0.27  Score=43.14  Aligned_cols=35  Identities=26%  Similarity=0.378  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      .+.+|+|+|| |.-|-..+..|.++|++|+++-++.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            4568999998 9999999999999999999987654

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.69  E-value=0.23  Score=45.45  Aligned_cols=36  Identities=25%  Similarity=0.217  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREG--FSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G--~~V~al~R~~~   39 (427)
                      .+++|+|+|| |..|-.++..|+++|  ++|+++-|+..
T Consensus         3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            4578999998 999999999999877  69999998853

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=88.64  E-value=0.71  Score=39.81  Aligned_cols=97  Identities=27%  Similarity=0.258  Sum_probs=62.3

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec------------
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN------------   68 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD------------   68 (427)
                      ..+|.|.|. |..|..++.+|.+.|.   +.+++..+...   |.......           .+..+.            
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~---L~~~~~~~-----------ki~ig~~~t~g~Gag~~p   79 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQ---LIRTKADK-----------KILIGKKLTRGLGAGGNP   79 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHH---HHTSCCSE-----------EEECCTTTTTTBCCTTCH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHH---HhcCCcch-----------hcccccccccccccccch
Confidence            468999998 9999999999999874   44555554332   32211110           011111            


Q ss_pred             -------CCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeE
Q 044905           69 -------FDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV  120 (427)
Q Consensus        69 -------l~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~  120 (427)
                             ..+.+.+.+.++++|.||.++|....     +-...+--+.+.|+..|+..+
T Consensus        80 ~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGG-----TGsgaapvia~~ake~g~lvv  133 (209)
T d2vapa1          80 KIGEEAAKESAEEIKAAIQDSDMVFITCGLGGG-----TGTGSAPVVAEISKKIGALTV  133 (209)
T ss_dssp             HHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSS-----HHHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCC-----ccccHHHHHHHHHHHcCCcEE
Confidence                   12456888899999999999987642     112244557889999887444

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.58  E-value=1.1  Score=36.05  Aligned_cols=40  Identities=20%  Similarity=0.105  Sum_probs=32.0

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHH
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARL   47 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~   47 (427)
                      ||.++|- |..|+.++++|++.|+.+ ...|+.++...+...
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~   41 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEE   41 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHH
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHH
Confidence            6899996 999999999999999876 567877766555443

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=88.24  E-value=0.43  Score=41.90  Aligned_cols=70  Identities=14%  Similarity=0.024  Sum_probs=48.1

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNA   82 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~   82 (427)
                      +.++|+|-|- |.+|+++++.|.+.|..|++.+.+......+....-              ...   .+++.+  .-..|
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g--------------~~~---~~~~~~--~~~~c   97 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG--------------ADA---VAPNAI--YGVTC   97 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--------------CEE---CCGGGT--TTCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC--------------Ccc---cCCccc--ccccc
Confidence            3568999986 999999999999999999998877665544432111              111   122221  13479


Q ss_pred             CEEEEccCCC
Q 044905           83 GKVVVTIGPT   92 (427)
Q Consensus        83 d~Vi~~ag~~   92 (427)
                      |+++-||...
T Consensus        98 DIl~PcA~~~  107 (230)
T d1leha1          98 DIFAPCALGA  107 (230)
T ss_dssp             SEEEECSCSC
T ss_pred             cEeccccccc
Confidence            9999999754

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.17  E-value=0.76  Score=39.42  Aligned_cols=43  Identities=19%  Similarity=0.294  Sum_probs=31.2

Q ss_pred             CCCCEEEEEcCCcHHHHH-HHHHHH---HCC-----CeEEEEecCcchHHHH
Q 044905            2 KDSGTVFVAGATGQAGVR-IAQTLL---REG-----FSVRAGVPELGAAQEL   44 (427)
Q Consensus         2 ~~~~kIlItGATG~iG~~-lv~~LL---~~G-----~~V~al~R~~~~~~~l   44 (427)
                      +++.+++|+||||-+..+ |...|-   ..|     +.|+++.|++-..++.
T Consensus        18 ~~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~f   69 (203)
T d1qkia1          18 SDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADI   69 (203)
T ss_dssp             SCCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHH
T ss_pred             CCCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHH
Confidence            456679999999988876 666663   344     7899999987543333

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.15  E-value=0.24  Score=41.69  Aligned_cols=33  Identities=18%  Similarity=0.133  Sum_probs=29.1

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~   38 (427)
                      |||+|.|| |++|-.++..|.+.  +.+|+.+.|+.
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            78999998 99999999999886  46899988765

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.83  E-value=1  Score=41.23  Aligned_cols=74  Identities=20%  Similarity=0.147  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHH-CC-CeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHH
Q 044905            1 RKDSGTVFVAGATGQAGVRIAQTLLR-EG-FSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKA   78 (427)
Q Consensus         1 ~~~~~kIlItGATG~iG~~lv~~LL~-~G-~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~a   78 (427)
                      |.+..+++|+|+ |.+++..++.|.. .. .+|++.+|++++.+.+.......         .+.+ ..+  .    .++
T Consensus       122 ~~~~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~---------~~~~-~~~--~----~~a  184 (320)
T d1omoa_         122 RKNSSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR---------GISA-SVQ--P----AEE  184 (320)
T ss_dssp             CTTCCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT---------TCCE-EEC--C----HHH
T ss_pred             cCCccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhc---------CCcc-ccc--h----hhh
Confidence            457788999985 9999999999887 34 58999999988766554432221         1112 222  2    345


Q ss_pred             hcCcCEEEEccCC
Q 044905           79 IGNAGKVVVTIGP   91 (427)
Q Consensus        79 l~g~d~Vi~~ag~   91 (427)
                      +.++|+|+.+...
T Consensus       185 ~~~aDiV~taT~s  197 (320)
T d1omoa_         185 ASRCDVLVTTTPS  197 (320)
T ss_dssp             HTSSSEEEECCCC
T ss_pred             hccccEEEEeccC
Confidence            7899999887653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=87.76  E-value=0.29  Score=40.70  Aligned_cols=67  Identities=13%  Similarity=0.191  Sum_probs=50.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcCcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGNAG   83 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g~d   83 (427)
                      .++++|.|- |.+|+-+++.|...|.+|+++-.+|-+  .|+...           +.+.+        ..+.++++.+|
T Consensus        23 Gk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~--alqA~m-----------dGf~v--------~~~~~a~~~aD   80 (163)
T d1v8ba1          23 GKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC--AIQAVM-----------EGFNV--------VTLDEIVDKGD   80 (163)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH--HHHHHT-----------TTCEE--------CCHHHHTTTCS
T ss_pred             CCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh--hHHHHh-----------cCCcc--------CchhHccccCc
Confidence            468899996 999999999999999999999999843  333321           11122        23467899999


Q ss_pred             EEEEccCCC
Q 044905           84 KVVVTIGPT   92 (427)
Q Consensus        84 ~Vi~~ag~~   92 (427)
                      ++|.+.|..
T Consensus        81 i~vTaTGn~   89 (163)
T d1v8ba1          81 FFITCTGNV   89 (163)
T ss_dssp             EEEECCSSS
T ss_pred             EEEEcCCCC
Confidence            999988863

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=87.39  E-value=2.1  Score=33.23  Aligned_cols=37  Identities=22%  Similarity=0.263  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      +..+|+|-|-||..|+.-++..++-|.+|++.+....
T Consensus         5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgk   41 (119)
T d2nu7a1           5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGK   41 (119)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTC
T ss_pred             CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCC
Confidence            3468999999999999999999999999999887643

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=87.14  E-value=0.29  Score=41.09  Aligned_cols=33  Identities=27%  Similarity=0.338  Sum_probs=29.7

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~   38 (427)
                      ++|+|.|| |..|-..+..|.++|+ +|+++-++.
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            47999998 9999999999999996 699998765

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=0.22  Score=45.18  Aligned_cols=35  Identities=17%  Similarity=0.041  Sum_probs=31.5

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      |..|+|+|| |..|..+++.|.+.|++|.++-++..
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            457999998 99999999999999999999987753

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=87.03  E-value=0.49  Score=39.44  Aligned_cols=105  Identities=19%  Similarity=0.181  Sum_probs=59.9

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHH---HHHhhhhhhhhh---hh-----ccceEEEecCCCHH
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELA---RLAASYKILSKE---EL-----KRLNAVESNFDSAE   73 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~---~~~~~~~~~~~~---~~-----~rl~vv~gDl~D~~   73 (427)
                      ++|.|=|= |.||+.+.+.|..++.+|+++.-. ...+.+.   .....++-+...   ..     .+-.+....-.|++
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~   78 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK   78 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCC-cchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence            57888885 999999999999999999888743 3333332   211111111000   00     01112222334555


Q ss_pred             HHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           74 SIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        74 sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                      .+.=.-.++|+|+-|.|...       +    ...++.-...|++++|+
T Consensus        79 ~i~W~~~gvdiViEcTG~f~-------~----~~~~~~hl~~gakkVii  116 (168)
T d2g82a1          79 EIPWAEAGVGVVIESTGVFT-------D----ADKAKAHLEGGAKKVII  116 (168)
T ss_dssp             GCCTGGGTEEEEEECSSSCC-------B----HHHHTHHHHTTCSEEEE
T ss_pred             HCcccccCCceeEecccccc-------c----hHHhhhhhccccceeee
Confidence            55433457899999998642       1    11333334578999874

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.01  E-value=0.49  Score=45.37  Aligned_cols=34  Identities=26%  Similarity=0.409  Sum_probs=29.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPEL   38 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~   38 (427)
                      ..+|||.|+ |.+|..+++.|+..|. ++++++.+.
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            358999999 7799999999999996 788887543

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.93  E-value=0.27  Score=43.33  Aligned_cols=31  Identities=26%  Similarity=0.275  Sum_probs=28.9

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |+|.|| |.+|..++.+|.++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899998 9999999999999999999998753

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.89  E-value=0.3  Score=40.86  Aligned_cols=32  Identities=22%  Similarity=0.129  Sum_probs=29.5

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      |+|+|| |..|...+..|.++|++|.++-++..
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            799997 99999999999999999999998753

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.69  E-value=0.49  Score=46.68  Aligned_cols=110  Identities=16%  Similarity=0.093  Sum_probs=64.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcchHHHHHHHH-hhhh------------hhhhhhhc--cceEEEe
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELGAAQELARLA-ASYK------------ILSKEELK--RLNAVES   67 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~~~~~l~~~~-~~~~------------~~~~~~~~--rl~vv~g   67 (427)
                      ..+|+|.|+ |.+|..+++.|+..|. ++++++.+.-....|.+.- ....            .+... .+  +++.+..
T Consensus        25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~l-Np~v~i~~~~~  102 (529)
T d1yova1          25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL-NSDVSGSFVEE  102 (529)
T ss_dssp             HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTT-CTTSBCCEESS
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHh-CCCCcEEEEcC
Confidence            468999998 7799999999999995 7888875543333332110 0000            00000 11  2223332


Q ss_pred             cCCCHHHH----HHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEeccccc
Q 044905           68 NFDSAESI----AKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIYDGNTT  129 (427)
Q Consensus        68 Dl~D~~sl----~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vSSs~v~  129 (427)
                      +   +..+    ...+.++|+||.+...          ......+-++|+..+++ +|.+.+.|++
T Consensus       103 ~---~~~~~~~~~~~~~~~dvVv~~~~~----------~~~~~~l~~~c~~~~ip-~i~~~~~G~~  154 (529)
T d1yova1         103 S---PENLLDNDPSFFCRFTVVVATQLP----------ESTSLRLADVLWNSQIP-LLICRTYGLV  154 (529)
T ss_dssp             C---HHHHHHSCGGGGGGCSEEEEESCC----------HHHHHHHHHHHHHHTCC-EEEEEEETTE
T ss_pred             C---chhhhhhHHHHhcCCCEEEECCCC----------HHHHHHHHHHHHHcCCC-EEEEeccCCE
Confidence            2   3322    2456788999976532          22345678899999885 6666666653

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.65  E-value=0.42  Score=41.39  Aligned_cols=35  Identities=26%  Similarity=0.324  Sum_probs=31.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGF-SVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~-~V~al~R~~~   39 (427)
                      +++|+|.|| |..|..++..|.+.|. .|+++-|++.
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            468999998 9999999999999995 8999988764

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.45  E-value=0.34  Score=39.65  Aligned_cols=35  Identities=26%  Similarity=0.353  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      ...+|+|.|| |++|-.++..|.+.|.+|+++.+..
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            3468999998 9999999999999998877665544

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=86.08  E-value=0.4  Score=38.75  Aligned_cols=32  Identities=25%  Similarity=0.403  Sum_probs=27.6

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      .+|+|.|| |++|-.++..|. ++++|+++.|.+
T Consensus         1 ~rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           1 SKVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             CeEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            37999998 999999998884 588999998764

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.84  E-value=0.062  Score=46.31  Aligned_cols=26  Identities=35%  Similarity=0.345  Sum_probs=23.8

Q ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeE
Q 044905            5 GTVFVAGATGQAGVRIAQTLLREGFSV   31 (427)
Q Consensus         5 ~kIlItGATG~iG~~lv~~LL~~G~~V   31 (427)
                      |+|+|.|| |-+|..++.+|+++|++|
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v   26 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSV   26 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence            68999998 999999999999999754

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.81  E-value=0.49  Score=36.50  Aligned_cols=36  Identities=17%  Similarity=0.057  Sum_probs=28.9

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLR---EGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~---~G~~V~al~R~~~   39 (427)
                      .+++|+|.|| |++|-.++..|.+   +|.+|+.+.|.+.
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            3578999998 9999999965544   5678999998764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.73  E-value=1  Score=40.84  Aligned_cols=32  Identities=28%  Similarity=0.224  Sum_probs=28.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP   36 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R   36 (427)
                      .++|+|-|- |.+|+++++.|.+.|..|++++-
T Consensus        36 gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          36 DKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            468999986 99999999999999999998873

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=85.66  E-value=0.55  Score=36.08  Aligned_cols=36  Identities=14%  Similarity=0.098  Sum_probs=29.7

Q ss_pred             CCCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEecCcc
Q 044905            3 DSGTVFVAGATGQAGVRIAQTLLR---EGFSVRAGVPELG   39 (427)
Q Consensus         3 ~~~kIlItGATG~iG~~lv~~LL~---~G~~V~al~R~~~   39 (427)
                      -+++++|.|| |++|-.++..|.+   .|.+|+.+.|.+.
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            3579999998 9999999976544   4899999998764

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=85.52  E-value=0.23  Score=43.17  Aligned_cols=98  Identities=14%  Similarity=0.101  Sum_probs=56.5

Q ss_pred             EEEEEcCCcHHHH-HHHHHHHHC-CCeEEEE-ecCcchHHHHHHH-HhhhhhhhhhhhccceEEEecCCCHHHHHHHhc-
Q 044905            6 TVFVAGATGQAGV-RIAQTLLRE-GFSVRAG-VPELGAAQELARL-AASYKILSKEELKRLNAVESNFDSAESIAKAIG-   80 (427)
Q Consensus         6 kIlItGATG~iG~-~lv~~LL~~-G~~V~al-~R~~~~~~~l~~~-~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~-   80 (427)
                      +|.|+|+ |.+|+ +++..+... +++|+++ +|+++++...... ++..          ..+  -.++|.+   +++. 
T Consensus        35 riaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~----------~~~--~~~~d~~---ell~~   98 (221)
T d1h6da1          35 GYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDP----------RKI--YDYSNFD---KIAKD   98 (221)
T ss_dssp             EEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCG----------GGE--ECSSSGG---GGGGC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccc----------ccc--cccCchh---hhccc
Confidence            6999996 99996 566766654 6888866 4666665544322 1110          001  0123322   3343 


Q ss_pred             -CcCEEEEccCCCCC----------------CCCccccHHHHHHHHHHHHHcCCCe
Q 044905           81 -NAGKVVVTIGPTED----------------GPTSEVSTSDAFQVIQAAQLAGVGH  119 (427)
Q Consensus        81 -g~d~Vi~~ag~~~~----------------~~~~~vn~~~~~~ll~Aa~~~gVk~  119 (427)
                       ++|+|+.+..+...                ......+...+..|+++++++++.-
T Consensus        99 ~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~~~  154 (221)
T d1h6da1          99 PKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKL  154 (221)
T ss_dssp             TTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCE
T ss_pred             ccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCCcE
Confidence             47777766554321                0024466677888888888887653

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.64  E-value=0.32  Score=43.05  Aligned_cols=33  Identities=24%  Similarity=0.308  Sum_probs=30.8

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      +|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            6999998 99999999999999999999998863

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.11  E-value=1.5  Score=37.40  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=54.5

Q ss_pred             CCCEEEEEc-CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAG-ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItG-ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.++||=.| |||..-.+|++.. ..| +|++++-++.....+......        ..++.++.+|..++......+..
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a~~--------~~ni~~i~~d~~~~~~~~~~~~~  125 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELVRE--------RNNIIPLLFDASKPWKYSGIVEK  125 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHHHH--------CSSEEEECSCTTCGGGTTTTCCC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHhhc--------cCCceEEEeeccCccccccccce
Confidence            346788788 5777777777654 455 899999998766655433221        45778899999988776656667


Q ss_pred             cCEEEEccC
Q 044905           82 AGKVVVTIG   90 (427)
Q Consensus        82 ~d~Vi~~ag   90 (427)
                      +|++++...
T Consensus       126 vd~v~~~~~  134 (209)
T d1nt2a_         126 VDLIYQDIA  134 (209)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            788877543

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.11  E-value=1.4  Score=36.67  Aligned_cols=78  Identities=14%  Similarity=0.080  Sum_probs=51.1

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecC--CCHHHHHHHhcC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNF--DSAESIAKAIGN   81 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl--~D~~sl~~al~g   81 (427)
                      .++++|.|-|.-+|+.|+..|+++|..|+....+.....   ..+....+        ...-..|+  ...+.+.+....
T Consensus        29 GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~lk~~~~~   97 (171)
T d1edza1          29 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF---TRGESLKL--------NKHHVEDLGEYSEDLLKKCSLD   97 (171)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE---ESCCCSSC--------CCCEEEEEEECCHHHHHHHHHH
T ss_pred             CCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc---ccccceee--------eeeccccccccchhHHhhcccc
Confidence            478999999999999999999999999987764421100   00000000        00111122  346678888889


Q ss_pred             cCEEEEccCCC
Q 044905           82 AGKVVVTIGPT   92 (427)
Q Consensus        82 ~d~Vi~~ag~~   92 (427)
                      +|+||..+|..
T Consensus        98 aDIvIsavG~p  108 (171)
T d1edza1          98 SDVVITGVPSE  108 (171)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEEccCCC
Confidence            99999988854

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=83.66  E-value=4.5  Score=33.97  Aligned_cols=41  Identities=20%  Similarity=0.351  Sum_probs=28.4

Q ss_pred             CCCEEE-EEcCCcHHHHH-HHHHHHH---CC-----CeEEEEecCcchHHH
Q 044905            3 DSGTVF-VAGATGQAGVR-IAQTLLR---EG-----FSVRAGVPELGAAQE   43 (427)
Q Consensus         3 ~~~kIl-ItGATG~iG~~-lv~~LL~---~G-----~~V~al~R~~~~~~~   43 (427)
                      +.++++ |+||||-+..+ |...|-+   .|     +.|+++.|+.-..+.
T Consensus         3 e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~   53 (195)
T d1h9aa1           3 EIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDE   53 (195)
T ss_dssp             CCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHH
T ss_pred             CCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHH
Confidence            345655 78999999887 5555543   33     789999998754433

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=82.88  E-value=3.2  Score=33.37  Aligned_cols=108  Identities=13%  Similarity=0.114  Sum_probs=59.8

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceE-EEecCCCHHHHHHHhc--
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNA-VESNFDSAESIAKAIG--   80 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~v-v~gDl~D~~sl~~al~--   80 (427)
                      ..+|.|++.+|..|..++..+-+.|.++--+.  +...+.|....+.+...      +..+ +.++ .+.+.+.++++  
T Consensus         3 G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~--~~t~~~L~~~lp~~~~~------~NPlD~~~~-~~~~~~~~~l~~~   73 (163)
T d2csua3           3 GNKVAIMTNAGGPGVLTADELDKRGLKLATLE--EKTIEELRSFLPPMAAV------KNPVDMIAS-ARGEDYYRTAKLL   73 (163)
T ss_dssp             SSEEEEEESCHHHHHHHHHHHHTTTCEECCCC--HHHHHHHHHHSCTTCEE------SSEEECCTT-CCHHHHHHHHHHH
T ss_pred             CCeEEEEECChHHHHHHHHHHHHcCCccCCCC--HHHHHHHHHhCCCcccC------CCcccccCC-CCHHHHHHHHHHH
Confidence            46899999999999999999999998775443  22334444433221000      0001 1122 34555555553  


Q ss_pred             ----CcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           81 ----NAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        81 ----g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                          ++|.|+....+.........  ..+..+++++++.+.++.|+
T Consensus        74 ~~d~~vd~v~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~kpv~  117 (163)
T d2csua3          74 LQDPNVDMLIAICVVPTFAGMTLT--EHAEGIIRAVKEVNNEKPVL  117 (163)
T ss_dssp             HHSTTCSEEEEEEECCCSTTCCSS--HHHHHHHHHHHHHCCCCCEE
T ss_pred             HcCCCcCEEEEeeccCCcccccHH--HHHHHHHHHHHHhcCCCcEE
Confidence                57877654433221111111  24566888888776544443

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=82.83  E-value=0.27  Score=40.74  Aligned_cols=32  Identities=31%  Similarity=0.383  Sum_probs=26.4

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEec
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREGFSVRAGVP   36 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G~~V~al~R   36 (427)
                      +.+|+|.|| |++|-.++..|.+.|++|.++.+
T Consensus         3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            346999997 99999999999999976655543

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.67  E-value=0.7  Score=39.40  Aligned_cols=35  Identities=31%  Similarity=0.355  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLRE--GFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~--G~~V~al~R~~~   39 (427)
                      +++|+|+|| |-.|...+..|+++  |++|+++.+.+.
T Consensus         1 ~~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           1 TPQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CCeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            369999998 99999999999875  789999988865

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.66  E-value=0.64  Score=42.11  Aligned_cols=33  Identities=30%  Similarity=0.246  Sum_probs=30.7

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCCeEEEEecCcc
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGFSVRAGVPELG   39 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~~V~al~R~~~   39 (427)
                      .|+|+|| |..|-..+.+|.++|++|+++.+.++
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            4999998 99999999999999999999998765

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.46  E-value=0.75  Score=36.43  Aligned_cols=35  Identities=29%  Similarity=0.334  Sum_probs=29.2

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHH----HCCCeEEEEecCcc
Q 044905            4 SGTVFVAGATGQAGVRIAQTLL----REGFSVRAGVPELG   39 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL----~~G~~V~al~R~~~   39 (427)
                      .++|+|.|| |++|-.++..|.    +.|.+|+.+.+++.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            468999998 999999998885    35899999987654

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.41  E-value=4  Score=34.46  Aligned_cols=106  Identities=19%  Similarity=0.239  Sum_probs=61.4

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCC---CeEEEEecCcchHHHHHHHHhhhhhh-hhhhhccc------e-EEEecCCCHHH
Q 044905            6 TVFVAGATGQAGVRIAQTLLREG---FSVRAGVPELGAAQELARLAASYKIL-SKEELKRL------N-AVESNFDSAES   74 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G---~~V~al~R~~~~~~~l~~~~~~~~~~-~~~~~~rl------~-vv~gDl~D~~s   74 (427)
                      .|.|.|- |..|..++.+|.+.|   .+.+++..+.+.+...   .....+. .......+      + -..+-..+.+.
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~---~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~   78 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKNI---AARTVLQLGPGVTKGLGAGANPEVGRQAALEDRER   78 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSC---SCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcC---CccceeccccccccCCCCCCChHHHHHHHHHHHHH
Confidence            5888997 999999999999987   4666666555433210   0000000 00000000      0 00001135678


Q ss_pred             HHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeE
Q 044905           75 IAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV  120 (427)
Q Consensus        75 l~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~  120 (427)
                      +.+.++++|.||.++|....     .-.-.+--+.+.|++.|+--+
T Consensus        79 I~~~l~~~d~vfi~AGlGGG-----TGtgaapviA~~ake~g~lvv  119 (198)
T d1ofua1          79 ISEVLEGADMVFITTGMGGG-----TGTGAAPIIAEVAKEMGILTV  119 (198)
T ss_dssp             HHHHHTTCSEEEEEEETTSS-----HHHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHhCCCCeEEEEecCCCC-----ccccHHHHHHHHHHHcCCCEE
Confidence            88999999999999997642     111234457899999887433

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.26  E-value=3  Score=35.97  Aligned_cols=76  Identities=12%  Similarity=0.092  Sum_probs=51.4

Q ss_pred             CCCEEEEEc-CCcHHHHHHHHHHHHCCCeEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEecCCCHHHHHHHhcC
Q 044905            3 DSGTVFVAG-ATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESNFDSAESIAKAIGN   81 (427)
Q Consensus         3 ~~~kIlItG-ATG~iG~~lv~~LL~~G~~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gDl~D~~sl~~al~g   81 (427)
                      +.++||=.| |||+.-++|++. .. +-.|++++-++.....+......        ..++..+.+|..++.........
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~~--------~~ni~~i~~d~~~~~~~~~~~~~  143 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACAE--------RENIIPILGDANKPQEYANIVEK  143 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTTT--------CTTEEEEECCTTCGGGGTTTCCC
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHhh--------hcccceEEEeeccCcccccccce
Confidence            456888888 678888888875 33 35999999998766655443222        45667889999887765444444


Q ss_pred             cCEEEEc
Q 044905           82 AGKVVVT   88 (427)
Q Consensus        82 ~d~Vi~~   88 (427)
                      +|.+++.
T Consensus       144 v~~i~~~  150 (230)
T d1g8sa_         144 VDVIYED  150 (230)
T ss_dssp             EEEEEEC
T ss_pred             eEEeecc
Confidence            5555543

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.08  E-value=0.76  Score=40.78  Aligned_cols=31  Identities=29%  Similarity=0.353  Sum_probs=28.8

Q ss_pred             EEEEcCCcHHHHHHHHHHHHCCCeEEEEecCc
Q 044905            7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPEL   38 (427)
Q Consensus         7 IlItGATG~iG~~lv~~LL~~G~~V~al~R~~   38 (427)
                      |+|+|| |..|-..+..|.++|++|+++-++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789998 9999999999999999999998764

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=81.06  E-value=2.5  Score=34.81  Aligned_cols=107  Identities=12%  Similarity=0.052  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEecCcchHHHHH---HHHhhhhhhhhh----h----hccceEEEecCCC
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG-FSVRAGVPELGAAQELA---RLAASYKILSKE----E----LKRLNAVESNFDS   71 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G-~~V~al~R~~~~~~~l~---~~~~~~~~~~~~----~----~~rl~vv~gDl~D   71 (427)
                      +++|.|-| -|.||+.+.+.++.+. .+|+++.-.. ..+.+.   .....++-++..    +    ..+-.+-.....|
T Consensus         1 tikigING-FGRIGR~v~R~~~~~~~i~ivaINd~~-~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~   78 (166)
T d1gado1           1 TIKVGING-FGRIGRIVFRAAQKRSDIEIVAINDLL-DADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERD   78 (166)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSS
T ss_pred             CeEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeCCC-CHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCC
Confidence            35889988 5999999999999985 7888877433 333332   211111111000    0    0111122222345


Q ss_pred             HHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEEEe
Q 044905           72 AESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAIIY  124 (427)
Q Consensus        72 ~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~vS  124 (427)
                      ++.+.=.-.++|+||-|.|....           ..-++.-...|+++++ +|
T Consensus        79 p~~i~W~~~gvDiViEcTG~f~t-----------~~~~~~hl~~gakkVi-iS  119 (166)
T d1gado1          79 PANLKWDEVGVDVVAEATGLFLT-----------DETARKHITAGAKKVV-MT  119 (166)
T ss_dssp             GGGGCHHHHTCSEEEECSSSCCS-----------HHHHTHHHHTTCSEEE-ES
T ss_pred             hHHCCccccCCCEEEEccccccC-----------HHHHHHHhcCCCceEE-ee
Confidence            55443233479999999997531           1122233356899977 44

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=80.73  E-value=3.5  Score=34.90  Aligned_cols=96  Identities=23%  Similarity=0.229  Sum_probs=61.5

Q ss_pred             EEEEEcCCcHHHHHHHHHHHHCCC---eEEEEecCcchHHHHHHHHhhhhhhhhhhhccceEEEec--------------
Q 044905            6 TVFVAGATGQAGVRIAQTLLREGF---SVRAGVPELGAAQELARLAASYKILSKEELKRLNAVESN--------------   68 (427)
Q Consensus         6 kIlItGATG~iG~~lv~~LL~~G~---~V~al~R~~~~~~~l~~~~~~~~~~~~~~~~rl~vv~gD--------------   68 (427)
                      +|-|.|- |..|..++.+|.++|.   +.+++..+..   .|.......           .+..+.              
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~---~L~~~~~~~-----------ki~iG~~~t~G~Gagg~p~~   67 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQ---ALLMSDADV-----------KLDVGRDSTRGLGAGADPEV   67 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHH---HHHHCCCSE-----------EEECCTTTC-----CCCHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHH---HHhcCCcch-----------hhccccccccCCCcCcChhh
Confidence            5778887 8899999999999873   5555555433   232221111           112221              


Q ss_pred             -----CCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEE
Q 044905           69 -----FDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVA  121 (427)
Q Consensus        69 -----l~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V  121 (427)
                           ..+.+.+.+.++++|.||.++|....     .-.-.+--+.+.|++.|+-.+-
T Consensus        68 g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGg-----TGtGaaPviA~iake~g~l~v~  120 (198)
T d1rq2a1          68 GRKAAEDAKDEIEELLRGADMVFVTAGEGGG-----TGTGGAPVVASIARKLGALTVG  120 (198)
T ss_dssp             HHHHHHHTHHHHHHHHTTCSEEEEEEETTSS-----HHHHHHHHHHHHHHHHTCEEEE
T ss_pred             hHhhHHHHHHHHHHHhcCCCEEEEEEecCCC-----CCcchHHHHHHHHHHcCCcEEE
Confidence                 23577888999999999999997642     1112444578899998874443

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=80.62  E-value=1.7  Score=36.16  Aligned_cols=106  Identities=16%  Similarity=0.119  Sum_probs=55.9

Q ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEecCcchHHH---HHHHHhhhhhhhhh-----h---hccceEEEec
Q 044905            4 SGTVFVAGATGQAGVRIAQTLLREG----FSVRAGVPELGAAQE---LARLAASYKILSKE-----E---LKRLNAVESN   68 (427)
Q Consensus         4 ~~kIlItGATG~iG~~lv~~LL~~G----~~V~al~R~~~~~~~---l~~~~~~~~~~~~~-----~---~~rl~vv~gD   68 (427)
                      +++|.|=| =|.||+.+++.+++++    .+|+++.-. ...+.   |......+..+...     +   ..+-.+....
T Consensus         1 tikigING-fGRIGR~v~R~~~~~~~~~~~~vvaINd~-~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~   78 (173)
T d1obfo1           1 TIRVAING-YGRIGRNILRAHYEGGKSHDIEIVAINDL-GDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDA   78 (173)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEECS-SCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEEC
T ss_pred             CeEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEcCC-CChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEe
Confidence            36899988 5999999999999753    567766632 22222   22211111111100     0   0011122222


Q ss_pred             CCCHHHHHHHhcCcCEEEEccCCCCCCCCccccHHHHHHHHHHHHHcCCCeEEE
Q 044905           69 FDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHVAI  122 (427)
Q Consensus        69 l~D~~sl~~al~g~d~Vi~~ag~~~~~~~~~vn~~~~~~ll~Aa~~~gVk~~V~  122 (427)
                      -.|++.+.=.-.++|+|+=|.|...       +...+...+    .+|++++|+
T Consensus        79 ~~~p~~i~W~~~gvDiViEcTG~f~-------~~~~a~~hl----~~GakkVii  121 (173)
T d1obfo1          79 NRNPAQLPWGALKVDVVLECTGFFT-------TKEKAGAHI----KGGAKKVII  121 (173)
T ss_dssp             CSCGGGSCTTTTTCSEEEECSSSCC-------SHHHHHHHH----HHTCSEEEE
T ss_pred             cCCHHHCcccccccceEEEeccccc-------CHHHHHHHh----ccCCcceEE
Confidence            3455544433347899999999642       111222233    358998873