Citrus Sinensis ID: 044926


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
MEQLKPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSSSSPLSRSLTSRM
cccccccccccccccHHHHHHHHHHHcccccEEEEccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHccccccHHcccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHccccccccccEEEEEccccccccccccccccccccccccHHHHHHccccccccccccccccHHHcccccccccccccEEEccHHHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHHHHcccEEccccccHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccccEEEEEEccccHHHHHHHHHHcccEEEEEEccccccccccccccccccccccHHHHHHHHHcccccccccEEEEEEcccccccccccccccEEEEEEHHHHcHHccccccccccccccccccccccEEEEcccccEEEEcccccEEEcccccccHHHHHHHHHccccccEEEEEEccccccccEEEEEEEEcccccccccHHHHHHHHHccccccccccEEEEcccccccccccccHHHHHHHHHHcccccccccccccccc
cccccccccccccccHHHHHHHHHHHcccccEEEEcccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHcccccccccEEEEcccccccEEccccccccccccccccHHHHHHcccccccccccccccccEEEEEcccccccccEEEEEcccHHHHHHHHHHHcccccccEEEEEEccEEcccccHHHHHHHHcccEEEEccccHHHHHHHHHHccccEcccHHHHHHHHHHccccccccccccccEEEEEcccccHHHHHHHHHHcccEEEEEcccccccccEEEccccHHHcccccccHccccccccccccccccEEEEccccccccccccccEEEEEEEcccccccccccHHHHHHHEcccccEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHcccccEEEEEEEEEEEcccEEEEEEEEEEcccccccccHHHHHHHHHHHHHHcccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccHHHcc
meqlkpspanstpltplVFLERAatvygdspsiiynnitytwsdtHHRCLQLASSLLSIgisrghvvsvvspnvpalyeLHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAvslfppdlkppplvlisddddaavssqshhpnisddqfFSTYESLvakgdpefewirprtewdpivlnytsgttmspkgvvhCHRGIFIVAVNtlsdwsvptqpvylwtlpmfhsngwcfpwamaavggtnicirkfDASIIFDLIRRhgvthmcgAPVVLNMlsnyrdpdkkplklakpvhlvtagapppaaVLLRTEslgfkvshgygltetggIVVSCAWKRNWNLLPAAEKAKLKARqgvkttaltevdvldpksgvsakrdgstLGEIVLRGGCImlgylkdpigtrkcmtddgwfytgdvgvmhsdgyleikdRSKDVIisggenlssVEVESVlysnpavneaavvarpdefwgetpcafvslkegskskpteKEMIEYCRgrlphymvpktvvfmdelpktstgkIQKFVLREIAenmgssssplsrsltsrm
meqlkpspanstpltPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQShhpnisddqFFSTYESLVAKGdpefewirprteWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLkarqgvkttaltevdvldpksgvsakrdgstlgeiVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAfvslkegskskpteKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIaenmgssssplsrsltsrm
MEQLKPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLIsddddaavssqsHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRdpdkkplklakpVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNllpaaekaklkaRQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIsggenlssvevesvlysnPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGssssplsrsltsrM
**************TPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDL****LVL*********************QFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP**KPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVL************STLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSL************MIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE********************
****KPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPD****KLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIA******************
***********TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDD*********PNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM***************
****KPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENM***************
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MEQLKPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREIAENMGSSSSPLSRSLTSRM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query569 2.2.26 [Sep-21-2011]
Q9FFE6552 Probable acyl-activating yes no 0.964 0.994 0.665 0.0
Q9FFE9550 Probable acyl-activating no no 0.959 0.992 0.662 0.0
Q9LQS1544 Probable acyl-activating no no 0.954 0.998 0.648 0.0
Q9LPK6550 Probable acyl-activating no no 0.956 0.989 0.610 0.0
O80658545 Probable acyl-activating no no 0.952 0.994 0.606 0.0
Q9LPK7549 Probable acyl-activating no no 0.950 0.985 0.616 0.0
F4HUK6556 Probable acyl-activating no no 0.959 0.982 0.511 1e-160
Q9SEY5603 Probable acyl-activating no no 0.968 0.913 0.519 1e-158
Q9C8D4572 Butyrate--CoA ligase AAE1 no no 0.952 0.947 0.483 1e-152
Q9SS01580 Benzoate--CoA ligase, per no no 0.950 0.932 0.476 1e-149
>sp|Q9FFE6|AAE5_ARATH Probable acyl-activating enzyme 5, peroxisomal OS=Arabidopsis thaliana GN=AAE5 PE=2 SV=1 Back     alignment and function desciption
 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/565 (66%), Positives = 461/565 (81%), Gaps = 16/565 (2%)

Query: 1   MEQLKPSPANSTPLTPLVFLERAATVYGDSPSIIY-NNITYTWSDTHHRCLQLASSLLSI 59
           MEQ+KP  ANS PLTP+ FLERAATVYGD  SI+Y +N  YTW +T+ RCL++ASSL SI
Sbjct: 1   MEQMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSI 60

Query: 60  GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119
           GI R  VVSV+SPN PA+YEL FAVP + A+LN INTRLDARTVS+LL+HC SKL+FVD 
Sbjct: 61  GIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCGSKLLFVDV 120

Query: 120 HSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFS-TYESLVAKGD 178
            S  L  EA+S+   D  PP LV I+D ++     +    +++D   FS TY+ L+ +GD
Sbjct: 121 FSVDLAVEAISMMTTD--PPILVFIADKEE-----EGGDADVADRTKFSYTYDDLIHRGD 173

Query: 179 PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTL 238
            +F+WIRP +EWDP+VLNYTSGTT +PKGVVHCHRGIF++++++L DW+VP  PVYLWTL
Sbjct: 174 LDFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSIDSLIDWTVPKNPVYLWTL 233

Query: 239 PMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP 298
           P+FH+NGW +PW +AAVGGTN+C+RKFDA +I+ LIR HGVTHMCGAPVVLNMLS   + 
Sbjct: 234 PIFHANGWSYPWGIAAVGGTNVCLRKFDAPLIYRLIRDHGVTHMCGAPVVLNMLSATNE- 292

Query: 299 DKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLL 358
             +PL   +PV+++TAGAPPPAAVLLR ES+GF +SHGYGLTET G+ VSCAWK  WN L
Sbjct: 293 -FQPLN--RPVNILTAGAPPPAAVLLRAESIGFVISHGYGLTETAGLNVSCAWKPQWNRL 349

Query: 359 PAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIG 418
           PA+++A+LKARQGV+T   TE+DV+DP+SG S +R+G T+GEIV+RG  IMLGYLKDP+G
Sbjct: 350 PASDRARLKARQGVRTVGFTEIDVVDPESGRSVERNGETVGEIVMRGSSIMLGYLKDPVG 409

Query: 419 TRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEA 478
           T K +  +GWFYTGDVGV+HSDGYLEIKDRSKD+II+GGEN+SSVEVE+VLY+NPAVNE 
Sbjct: 410 TEKAL-KNGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTNPAVNEV 468

Query: 479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTS 538
           AVVARPD FWGETPCAFVSLK G   +PTE EMIEYCR ++P YMVPKTV F+DELPKTS
Sbjct: 469 AVVARPDVFWGETPCAFVSLKSGLTQRPTEVEMIEYCRKKMPKYMVPKTVSFVDELPKTS 528

Query: 539 TGKIQKFVLREIAENMGSSSSPLSR 563
           TGK+ KFVLREIA+ MG++   LSR
Sbjct: 529 TGKVMKFVLREIAKKMGTTR--LSR 551




May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q9FFE9|AAE6_ARATH Probable acyl-activating enzyme 6 OS=Arabidopsis thaliana GN=AAE6 PE=2 SV=1 Back     alignment and function description
>sp|Q9LQS1|AAE8_ARATH Probable acyl-activating enzyme 8 OS=Arabidopsis thaliana GN=AAE8 PE=2 SV=1 Back     alignment and function description
>sp|Q9LPK6|AEE9_ARATH Probable acyl-activating enzyme 9 OS=Arabidopsis thaliana GN=AEE9 PE=2 SV=1 Back     alignment and function description
>sp|O80658|AAE4_ARATH Probable acyl-activating enzyme 4 OS=Arabidopsis thaliana GN=AEE4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LPK7|AEE10_ARATH Probable acyl-activating enzyme 10 OS=Arabidopsis thaliana GN=AEE10 PE=2 SV=1 Back     alignment and function description
>sp|F4HUK6|AAE1_ARATH Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana GN=AAE1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SEY5|AAE2_ARATH Probable acyl-activating enzyme 2 OS=Arabidopsis thaliana GN=AAE2 PE=2 SV=1 Back     alignment and function description
>sp|Q9C8D4|AAE11_ARATH Butyrate--CoA ligase AAE11, peroxisomal OS=Arabidopsis thaliana GN=AAE11 PE=1 SV=1 Back     alignment and function description
>sp|Q9SS01|AAE20_ARATH Benzoate--CoA ligase, peroxisomal OS=Arabidopsis thaliana GN=AAE20 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query569
359476425588 PREDICTED: medium-chain-fatty-acid--CoA 0.956 0.925 0.745 0.0
255561466556 AMP dependent ligase, putative [Ricinus 0.968 0.991 0.745 0.0
225466183549 PREDICTED: putative acyl-CoA synthetase 0.963 0.998 0.730 0.0
224134905553 predicted protein [Populus trichocarpa] 0.963 0.990 0.737 0.0
224118022554 acyl:coa ligase acetate-coa synthetase-l 0.968 0.994 0.728 0.0
147800064537 hypothetical protein VITISV_042774 [Viti 0.942 0.998 0.722 0.0
224127758550 acyl:coa ligase acetate-coa synthetase-l 0.957 0.990 0.716 0.0
356500978549 PREDICTED: medium-chain-fatty-acid--CoA 0.949 0.983 0.713 0.0
357491647562 2-succinylbenzoate-CoA ligase [Medicago 0.984 0.996 0.691 0.0
255562407562 AMP dependent ligase, putative [Ricinus 0.964 0.976 0.704 0.0
>gi|359476425|ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera] Back     alignment and taxonomy information
 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/557 (74%), Positives = 481/557 (86%), Gaps = 13/557 (2%)

Query: 1   MEQLKPSPANSTPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIG 60
           ME+LKP PANS+PLT L FL+RAATVYGD PS++YN+ TYTWS THHRCLQ+ASS+ S+G
Sbjct: 40  MEELKPRPANSSPLTTLSFLDRAATVYGDCPSVVYNSTTYTWSQTHHRCLQVASSIKSLG 99

Query: 61  ISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFH 120
           I RG VVSVV+PN+PA+YELHFAVP A AVLNTINTRLDA+TVS+LL+H +SKL+FVD+ 
Sbjct: 100 IGRGQVVSVVAPNIPAMYELHFAVPMAGAVLNTINTRLDAKTVSVLLRHSESKLIFVDYQ 159

Query: 121 SRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPE 180
           SR L+ E++SLFPP  + P LVLI+DD+D+        P+  D  F  TYE +V +GDPE
Sbjct: 160 SRPLILESLSLFPPSSQRPLLVLITDDEDSP-------PSTVD--FLCTYEDMVGRGDPE 210

Query: 181 FEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPM 240
           F+WIRP +EW+P++LNYTSGTT SPKGVVHCHRGIFIV V++L DW VP QPVYLWTLPM
Sbjct: 211 FKWIRPESEWNPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLWTLPM 270

Query: 241 FHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDK 300
           FH+NGW FPW MAAVGGTN+C+RKFDAS+I++ IR H VTHMCGAPVVLNMLSN+  P  
Sbjct: 271 FHANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPVVLNMLSNW--PGT 328

Query: 301 KPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPA 360
           +PLK   PV ++TAGAPPPAA+LLRTES GF VSHGYGLTETGG+VVSC WK+ WN LPA
Sbjct: 329 EPLK--NPVQILTAGAPPPAAILLRTESRGFIVSHGYGLTETGGLVVSCVWKQKWNRLPA 386

Query: 361 AEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTR 420
            E+A+LK+RQGV+T  +TEVDVLDP SG+S KRDGS+LGEIVLRGGCIMLGYLKDP GT 
Sbjct: 387 TERARLKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYLKDPKGTS 446

Query: 421 KCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAV 480
           K +TDDGWF+TGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY++PAVNEAAV
Sbjct: 447 KSLTDDGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAV 506

Query: 481 VARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTG 540
           VARPD+FWGETPCAFVSLK     +PTEKE++EYCR R+PHYMVPKTVVF +ELPKTSTG
Sbjct: 507 VARPDDFWGETPCAFVSLKPERTEQPTEKEIMEYCRARMPHYMVPKTVVFEEELPKTSTG 566

Query: 541 KIQKFVLREIAENMGSS 557
           KIQKFVLRE A+ MGSS
Sbjct: 567 KIQKFVLRETAKAMGSS 583




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561466|ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis] gi|223538956|gb|EEF40553.1| AMP dependent ligase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225466183|ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224134905|ref|XP_002321934.1| predicted protein [Populus trichocarpa] gi|222868930|gb|EEF06061.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224118022|ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus trichocarpa] gi|222873762|gb|EEF10893.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147800064|emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224127758|ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus trichocarpa] gi|222870951|gb|EEF08082.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356500978|ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max] Back     alignment and taxonomy information
>gi|357491647|ref|XP_003616111.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula] gi|355517446|gb|AES99069.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula] Back     alignment and taxonomy information
>gi|255562407|ref|XP_002522210.1| AMP dependent ligase, putative [Ricinus communis] gi|223538581|gb|EEF40185.1| AMP dependent ligase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query569
TAIR|locus:2171357550 AT5G16340 [Arabidopsis thalian 0.954 0.987 0.622 7.7e-190
TAIR|locus:2171402552 AAE5 "acyl activating enzyme 5 0.954 0.983 0.624 3e-188
TAIR|locus:2204360544 AT1G75960 [Arabidopsis thalian 0.954 0.998 0.601 3.9e-179
TAIR|locus:2027032550 AT1G21540 [Arabidopsis thalian 0.956 0.989 0.565 1.2e-168
TAIR|locus:2195950545 AAE2 "acyl activating enzyme 2 0.952 0.994 0.559 3.2e-168
TAIR|locus:2027012549 AT1G21530 [Arabidopsis thalian 0.950 0.985 0.570 2.2e-167
TAIR|locus:2057249603 AT2G17650 [Arabidopsis thalian 0.964 0.910 0.473 2.3e-133
TIGR_CMR|SPO_0677542 SPO_0677 "AMP-binding protein" 0.929 0.976 0.461 1.9e-131
TAIR|locus:2030407556 AAE1 "acyl activating enzyme 1 0.949 0.971 0.470 1.7e-130
UNIPROTKB|Q47WB3541 CPS_4259 "AMP-binding protein" 0.929 0.977 0.456 2e-127
TAIR|locus:2171357 AT5G16340 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1840 (652.8 bits), Expect = 7.7e-190, P = 7.7e-190
 Identities = 347/557 (62%), Positives = 420/557 (75%)

Query:     1 MEQLKPSPANSTPLTPLVFLERAATVYGDSPSIIY-NNITYTWSDTHHRCLQLASSLLSI 59
             ME++KP  ANS PLTP+ FLERAATVYGD  SI+Y +N  YTW +T+ RCL++ASSL SI
Sbjct:     1 MEEMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSI 60

Query:    60 GISRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDF 119
             GI R  VVSV+SPN PA+YEL FAVP + A+LN INTRLDARTVS+LL+HC+SKL+FVD 
Sbjct:    61 GIGRSDVVSVLSPNTPAMYELQFAVPMSGAILNNINTRLDARTVSVLLRHCESKLLFVDV 120

Query:   120 HSRALVREAVSLFPPDLKPPPLVLIXXXXXXXXXXXXHHPNISDDQFFS-TYESLVAKGD 178
              S  L  EAVS+   D  PP LV+I               +++D   FS TY+ L+ +GD
Sbjct:   121 FSVDLAVEAVSMMTTD--PPILVVIADKEEEGGVA-----DVADLSKFSYTYDDLIERGD 173

Query:   179 PEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTL 238
             P F+WIRP +EWDP+VLNYTSGTT +PKGVVHCHRGIF+++V++L DW+VP  PVYLWTL
Sbjct:   174 PGFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSVDSLIDWAVPKNPVYLWTL 233

Query:   239 PMFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRXX 298
             P+FHSNGW  PW +AAVGGTN+C+RKFDA +I+ LIR HGVTHMCGAPVVLNMLS     
Sbjct:   234 PIFHSNGWTNPWGIAAVGGTNVCLRKFDAPLIYRLIRDHGVTHMCGAPVVLNMLS----A 289

Query:   299 XXXXXXXXXXVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNXX 358
                       V+++TAG+PPPA VLLR ES+GF +SHGYGLTET G++VSCAWK  WN  
Sbjct:   290 TQESQPLNHPVNILTAGSPPPATVLLRAESIGFVISHGYGLTETAGVIVSCAWKPKWNHL 349

Query:   359 XXXXXXXXXXRQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIG 418
                       RQGV+T   TE+DV+DP+SG+S +R+G T+GEIV+RG  +MLGYLKDP+G
Sbjct:   350 PASDRARLKARQGVRTVGFTEIDVVDPESGLSVERNGETVGEIVMRGSSVMLGYLKDPVG 409

Query:   419 TRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEA 478
             T K + + GWFYTGDVGV+HSDGYLEIKDRSKD+II                  PAVNE 
Sbjct:   410 TEKALKN-GWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENVSSVEVETVLYTIPAVNEV 468

Query:   479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTS 538
             AVVARPDEFWGETPCAFVSLK G   KPTE+E++EYCR ++P YMVPKTV FMDELPK+S
Sbjct:   469 AVVARPDEFWGETPCAFVSLKNGFSGKPTEEELMEYCRKKMPKYMVPKTVSFMDELPKSS 528

Query:   539 TGKIQKFVLREIAENMG 555
             TGK+ KFVLR+IA+ MG
Sbjct:   529 TGKVTKFVLRDIAKKMG 545




GO:0003824 "catalytic activity" evidence=IEA
GO:0008152 "metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2171402 AAE5 "acyl activating enzyme 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2204360 AT1G75960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027032 AT1G21540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195950 AAE2 "acyl activating enzyme 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027012 AT1G21530 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057249 AT2G17650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0677 SPO_0677 "AMP-binding protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TAIR|locus:2030407 AAE1 "acyl activating enzyme 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q47WB3 CPS_4259 "AMP-binding protein" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O53306FAC13_MYCTU6, ., 2, ., 1, ., 30.31590.81720.9244yesno
Q9FFE6AAE5_ARATH6, ., 2, ., 1, ., -0.66540.96480.9945yesno
Q5SKN9LCFCS_THET86, ., 2, ., 1, ., 30.33880.88920.9353yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00023414001
SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (549 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query569
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 0.0
PRK08162545 PRK08162, PRK08162, acyl-CoA synthetase; Validated 0.0
PLN02479567 PLN02479, PLN02479, acetate-CoA ligase 0.0
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 0.0
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 1e-144
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 1e-143
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 1e-143
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 1e-131
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 1e-113
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 1e-104
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 1e-104
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 1e-94
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 8e-91
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 2e-85
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 9e-82
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 6e-81
PRK07008539 PRK07008, PRK07008, long-chain-fatty-acid--CoA lig 7e-78
PRK06018542 PRK06018, PRK06018, putative acyl-CoA synthetase; 3e-76
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 1e-74
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 2e-74
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 1e-73
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 5e-73
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 1e-71
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 1e-71
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 3e-69
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 5e-69
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 6e-69
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 1e-67
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 7e-67
cd05912407 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase 2e-65
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 4e-65
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 4e-65
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 2e-63
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 9e-63
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 2e-61
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 5e-61
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 8e-60
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 3e-59
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 4e-59
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 1e-58
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 4e-58
PRK05620576 PRK05620, PRK05620, long-chain-fatty-acid--CoA lig 2e-57
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 5e-57
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 8e-57
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 7e-56
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 4e-55
PRK07470528 PRK07470, PRK07470, acyl-CoA synthetase; Validated 2e-54
PRK06188524 PRK06188, PRK06188, acyl-CoA synthetase; Validated 4e-54
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 2e-53
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 7e-53
PLN02860563 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase 2e-51
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 4e-51
PRK05605573 PRK05605, PRK05605, long-chain-fatty-acid--CoA lig 4e-51
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 1e-50
cd05944359 cd05944, FACL_like_4, Uncharacterized subfamily of 3e-50
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 6e-50
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 8e-49
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 1e-48
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 1e-46
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 3e-46
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 7e-45
PRK13391511 PRK13391, PRK13391, acyl-CoA synthetase; Provision 1e-44
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 2e-44
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 5e-44
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 4e-43
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 9e-43
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 1e-42
PRK13382537 PRK13382, PRK13382, acyl-CoA synthetase; Provision 2e-42
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 3e-42
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 5e-42
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 8e-42
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 1e-41
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 2e-41
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 2e-40
TIGR03205541 TIGR03205, pimA, dicarboxylate--CoA ligase PimA 6e-40
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 8e-40
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 3e-39
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 4e-38
PRK06164540 PRK06164, PRK06164, acyl-CoA synthetase; Validated 4e-38
PRK05677562 PRK05677, PRK05677, long-chain-fatty-acid--CoA lig 1e-37
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 1e-37
PRK07787471 PRK07787, PRK07787, acyl-CoA synthetase; Validated 3e-37
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 4e-37
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 1e-36
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 1e-36
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 3e-36
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 3e-36
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 1e-35
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 1e-34
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 3e-33
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 8e-33
cd05924365 cd05924, FACL_like_5, Uncharacterized subfamily of 9e-33
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 4e-32
PRK12492562 PRK12492, PRK12492, long-chain-fatty-acid--CoA lig 5e-32
cd05927539 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty 2e-31
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 8e-31
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 1e-30
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 3e-30
PRK13390501 PRK13390, PRK13390, acyl-CoA synthetase; Provision 3e-30
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 1e-29
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 2e-29
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 5e-29
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 1e-28
PRK09029458 PRK09029, PRK09029, O-succinylbenzoic acid--CoA li 2e-28
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 2e-27
cd05933594 cd05933, ACSBG_like, Bubblegum-like very long-chai 6e-26
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-25
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 1e-25
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 5e-25
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 2e-24
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 5e-24
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 2e-22
cd12116438 cd12116, A_NRPS_Ta1_like, The adenylation domain o 2e-22
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 3e-22
PRK13383516 PRK13383, PRK13383, acyl-CoA synthetase; Provision 8e-21
PRK068141140 PRK06814, PRK06814, acylglycerophosphoethanolamine 9e-21
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 1e-20
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 1e-20
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 5e-20
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 2e-19
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 4e-19
PRK07445452 PRK07445, PRK07445, O-succinylbenzoic acid--CoA li 1e-18
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 2e-18
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 4e-18
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 1e-17
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 2e-16
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 4e-16
PRK07824358 PRK07824, PRK07824, O-succinylbenzoic acid--CoA li 8e-16
cd05914448 cd05914, FACL_like_3, Uncharacterized subfamily of 8e-16
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 1e-15
PRK08308414 PRK08308, PRK08308, acyl-CoA synthetase; Validated 2e-15
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 2e-15
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 2e-15
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 3e-15
PLN02861660 PLN02861, PLN02861, long-chain-fatty-acid-CoA liga 5e-15
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-14
PRK05851525 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-c 7e-14
PRK07768545 PRK07768, PRK07768, long-chain-fatty-acid--CoA lig 1e-13
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 3e-13
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 4e-13
PLN02387696 PLN02387, PLN02387, long-chain-fatty-acid-CoA liga 5e-13
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 7e-13
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 7e-13
cd05921559 cd05921, FCS, Feruloyl-CoA synthetase (FCS) 7e-13
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 1e-12
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 3e-12
PRK09192579 PRK09192, PRK09192, acyl-CoA synthetase; Validated 5e-12
TIGR01217652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 6e-12
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 3e-11
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 3e-11
PRK08043718 PRK08043, PRK08043, bifunctional acyl-[acyl carrie 5e-11
pfam1319343 pfam13193, DUF4009, Domain of unknown function (DU 6e-11
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 7e-11
PRK09274552 PRK09274, PRK09274, peptide synthase; Provisional 1e-10
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 5e-10
TIGR01734502 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phospho 8e-10
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 8e-10
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 2e-09
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 4e-09
PTZ00342746 PTZ00342, PTZ00342, acyl-CoA synthetase; Provision 5e-09
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-08
PLN02614666 PLN02614, PLN02614, long-chain acyl-CoA synthetase 1e-08
PRK08279600 PRK08279, PRK08279, long-chain-acyl-CoA synthetase 3e-08
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 7e-08
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 8e-08
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 1e-07
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 4e-07
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 6e-07
cd05938535 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport 9e-07
PRK05691 4334 PRK05691, PRK05691, peptide synthase; Validated 3e-06
PRK056914334 PRK05691, PRK05691, peptide synthase; Validated 3e-06
TIGR02372386 TIGR02372, 4_coum_CoA_lig, 4-coumarate--CoA ligase 3e-06
PRK12582624 PRK12582, PRK12582, acyl-CoA synthetase; Provision 4e-06
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 4e-06
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 5e-06
PTZ00216700 PTZ00216, PTZ00216, acyl-CoA synthetase; Provision 5e-05
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 1e-04
cd05937468 cd05937, FATP_chFAT1_like, Uncharacterized subfami 2e-04
PRK05850578 PRK05850, PRK05850, acyl-CoA synthetase; Validated 3e-04
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 6e-04
PRK12476612 PRK12476, PRK12476, putative fatty-acid--CoA ligas 7e-04
cd05940444 cd05940, FATP_FACS, Fatty acid transport proteins 0.001
cd05939474 cd05939, hsFATP4_like, Fatty acid transport protei 0.002
PRK07769631 PRK07769, PRK07769, long-chain-fatty-acid--CoA lig 0.002
cd05910455 cd05910, FACL_like_1, Uncharacterized subfamily of 0.003
PLN02736651 PLN02736, PLN02736, long-chain acyl-CoA synthetase 0.003
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
 Score =  803 bits (2076), Expect = 0.0
 Identities = 296/538 (55%), Positives = 381/538 (70%), Gaps = 19/538 (3%)

Query: 12  TPLTPLVFLERAATVYGDSPSIIYNNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVS 71
            PLTPL FLERAA VY D  +++Y +  YT+ +T+ RC +LAS+L  +GI +G VV+V++
Sbjct: 2   VPLTPLSFLERAAKVYPDRTAVVYGDRRYTYRETYDRCRRLASALSKLGIGKGDVVAVLA 61

Query: 72  PNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSL 131
           PN PA+ E HF VP A AVL  +NTRLDA  ++ +L H ++K++FVD    +L  EA++L
Sbjct: 62  PNTPAMLEAHFGVPMAGAVLVPLNTRLDADDIAFILNHSEAKVLFVDQEFLSLAEEALAL 121

Query: 132 FPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWD 191
                     +++                         YE L+A GDP+   I P  EWD
Sbjct: 122 LSTKEIIDTEIIVISPAAEDSEEG-------------DYEDLLAGGDPDPLPIPPDDEWD 168

Query: 192 PIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWA 251
           PI LNYTSGTT +PKGVV+ HRG ++ A+  + +W +P +PVYLWTLPMFH NGWCFPWA
Sbjct: 169 PISLNYTSGTTGNPKGVVYTHRGAYLNALGNVIEWGMPDRPVYLWTLPMFHCNGWCFPWA 228

Query: 252 MAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHL 311
           + AVGGT++C+RK DA  I+DLI +H VTH+CGAP VLNML+N  + DK PL   +PV +
Sbjct: 229 ITAVGGTHVCLRKVDAPAIYDLIEKHKVTHLCGAPTVLNMLANAPEADKLPLP--RPVRV 286

Query: 312 VTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQG 371
           +TAGAPPP AV+ + E LGF+V+H YGLTET G +  C WK  W+ LPA E+A+LKARQG
Sbjct: 287 MTAGAPPPPAVIKKMEELGFEVTHVYGLTETYGPITVCEWKPEWDALPAEERARLKARQG 346

Query: 372 VKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYT 431
           V+   L EVDV+DP++     RDG T+GEIV+RG  +M GY K+P  T +     GWF++
Sbjct: 347 VRYVGLEEVDVVDPETMKDVPRDGKTIGEIVMRGNTVMKGYYKNPEATEEAFA-GGWFHS 405

Query: 432 GDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAAVVARPDEFWGET 491
           GD+ V+H DGY+EIKDRSKD+IISGGEN+SS+EVE VLY +PAV EAAVVARPDE WGET
Sbjct: 406 GDLAVVHPDGYIEIKDRSKDIIISGGENISSIEVEGVLYKHPAVLEAAVVARPDEKWGET 465

Query: 492 PCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLRE 549
           PCAFV LK G  +  TE+E+IEYCR +L H+ VPKTV F+ ELPKT+TGKIQKFVLRE
Sbjct: 466 PCAFVVLKPG--ASVTEEELIEYCREKLAHFKVPKTVEFV-ELPKTATGKIQKFVLRE 520


This family includes fatty acyl-CoA synthetases that can activate medium to long-chain fatty acids. These enzymes catalyze the ATP-dependent acylation of fatty acids in a two-step reaction. The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. Fatty acyl-CoA synthetases are responsible for fatty acid degradation as well as physiological regulation of cellular functions via the production of fatty acyl-CoA esters. The fatty acyl-CoA synthetase from Thermus thermophiles in this family has been shown to catalyze the long-chain fatty acid, myristoyl acid. Also included in this family are acyl activating enzymes from Arabidopsis, which contains a large number of proteins from this family with up to 63 different genes, many of which are uncharacterized. Length = 520

>gnl|CDD|236169 PRK08162, PRK08162, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|178097 PLN02479, PLN02479, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|235908 PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235673 PRK06018, PRK06018, putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213280 cd05912, OSB_CoA_lg, O-succinylbenzoate-CoA ligase (also known as O-succinylbenzoate-CoA synthase, OSB-CoA synthetase, or MenE) Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|180167 PRK05620, PRK05620, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|180988 PRK07470, PRK07470, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235731 PRK06188, PRK06188, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|215464 PLN02860, PLN02860, o-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235531 PRK05605, PRK05605, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213309 cd05944, FACL_like_4, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|184022 PRK13391, PRK13391, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|172019 PRK13382, PRK13382, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|132249 TIGR03205, pimA, dicarboxylate--CoA ligase PimA Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|235722 PRK06164, PRK06164, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|168170 PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|236096 PRK07787, PRK07787, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213291 cd05924, FACL_like_5, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|171539 PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213293 cd05927, LC-FACS_euk, Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS) Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|139538 PRK13390, PRK13390, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|236363 PRK09029, PRK09029, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|213299 cd05933, ACSBG_like, Bubblegum-like very long-chain fatty acid CoA synthetase (VL-FACS) Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213324 cd12116, A_NRPS_Ta1_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including salinosporamide A polyketide synthase Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|139531 PRK13383, PRK13383, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235865 PRK06814, PRK06814, acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|236019 PRK07445, PRK07445, O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|236108 PRK07824, PRK07824, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213282 cd05914, FACL_like_3, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|178452 PLN02861, PLN02861, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|180289 PRK05851, PRK05851, long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|236091 PRK07768, PRK07768, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|215217 PLN02387, PLN02387, long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213288 cd05921, FCS, Feruloyl-CoA synthetase (FCS) Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|236403 PRK09192, PRK09192, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|181207 PRK08043, PRK08043, bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|221971 pfam13193, DUF4009, Domain of unknown function (DUF4009) Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|236443 PRK09274, PRK09274, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|233551 TIGR01734, D-ala-DACP-lig, D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|166255 PLN02614, PLN02614, long-chain acyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|236217 PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|213304 cd05938, hsFATP2a_ACSVL_like, Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|235564 PRK05691, PRK05691, peptide synthase; Validated Back     alignment and domain information
>gnl|CDD|131425 TIGR02372, 4_coum_CoA_lig, 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>gnl|CDD|237144 PRK12582, PRK12582, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|240316 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|213303 cd05937, FATP_chFAT1_like, Uncharacterized subfamily of bifunctional fatty acid transporter/very-long-chain acyl-CoA synthetase in fungi Back     alignment and domain information
>gnl|CDD|235624 PRK05850, PRK05850, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|171527 PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213306 cd05940, FATP_FACS, Fatty acid transport proteins (FATP) play dual roles as fatty acid transporters and its activation enzymes Back     alignment and domain information
>gnl|CDD|213305 cd05939, hsFATP4_like, Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins Back     alignment and domain information
>gnl|CDD|181109 PRK07769, PRK07769, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213278 cd05910, FACL_like_1, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|178337 PLN02736, PLN02736, long-chain acyl-CoA synthetase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 569
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK056914334 peptide synthase; Validated 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
KOG36281363 consensus Predicted AMP-binding protein [General f 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.97
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.97
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.94
PRK09188365 serine/threonine protein kinase; Provisional 99.87
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.85
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.8
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.28
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.95
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.5
PLN02249597 indole-3-acetic acid-amido synthetase 98.02
PLN02620612 indole-3-acetic acid-amido synthetase 97.87
PLN02247606 indole-3-acetic acid-amido synthetase 97.72
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.58
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 95.78
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 88.37
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 87.16
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=3.1e-82  Score=635.49  Aligned_cols=524  Identities=44%  Similarity=0.716  Sum_probs=453.3

Q ss_pred             CCCCCCCCCCCCCCchHHHHHHHHHHcCCC-CeEEeCC---eeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCc
Q 044926            1 MEQLKPSPANSTPLTPLVFLERAATVYGDS-PSIIYNN---ITYTWSDTHHRCLQLASSLLSIG--ISRGHVVSVVSPNV   74 (569)
Q Consensus         1 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~-~al~~~~---~~~Ty~el~~~v~~~A~~L~~~g--~~~gd~V~i~~~n~   74 (569)
                      ++++.....+..+.+....+.+.+..++++ ..+++..   +.+||+|+.+++.++|..|.+.|  +++||+|++++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs   82 (537)
T KOG1176|consen    3 MEKLWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNT   82 (537)
T ss_pred             ccccccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCC
Confidence            355666667777888888888888777777 7777755   89999999999999999999875  89999999999999


Q ss_pred             hHHHHHHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccc
Q 044926           75 PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSS  154 (569)
Q Consensus        75 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (569)
                      ++++.+++||+..|++..++||.+.+.++.+.++.++++++|++....+.+.+......     ..++++.......   
T Consensus        83 ~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~-----~~i~~l~~~~~~~---  154 (537)
T KOG1176|consen   83 PEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA-----LKIIVLTGDEGVI---  154 (537)
T ss_pred             HHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC-----CceEEEecccCcc---
Confidence            99999999999999999999999999999999999999999999999998877765543     4555555431100   


Q ss_pred             cCCCCCCCCCcc-cchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCE
Q 044926          155 QSHHPNISDDQF-FSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPV  233 (569)
Q Consensus       155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~  233 (569)
                           ....... ...+.++...+.+..  ..+...+|++.++|||||||.||||.+||++++.+.......+.++..|+
T Consensus       155 -----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v  227 (537)
T KOG1176|consen  155 -----SISDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDV  227 (537)
T ss_pred             -----ccccccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCce
Confidence                 0000000 111444444443333  45567799999999999999999999999999998887777788888999


Q ss_pred             EEEecCchhhhhhhHHHHHHHhCceEEEe-ccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEE
Q 044926          234 YLWTLPMFHSNGWCFPWAMAAVGGTNICI-RKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLV  312 (569)
Q Consensus       234 ~~~~~pl~~~~g~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~  312 (569)
                      .++.+|++|.+|+...+.+.+.|++.++. +.+++..+++.+++|++|++.++|.++..+++.+.....+++  +++.+.
T Consensus       228 ~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~--sl~~v~  305 (537)
T KOG1176|consen  228 YLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLS--SLRSVL  305 (537)
T ss_pred             EEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCC--ccEEEE
Confidence            99999999999999988866665555555 567999999999999999999999999999999866666776  999999


Q ss_pred             EeCCCCcHHHHHHHH-hcC-CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCcc
Q 044926          313 TAGAPPPAAVLLRTE-SLG-FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVS  390 (569)
Q Consensus       313 ~~g~~l~~~~~~~~~-~~~-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~  390 (569)
                      +||+++++++.++++ +++ ..+.++||+||+++.++.+.+.++          ....++|.+.++. ...+.+ ++|..
T Consensus       306 ~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~-e~g~~  373 (537)
T KOG1176|consen  306 SGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLD-ETGVS  373 (537)
T ss_pred             ecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeC-CCCCC
Confidence            999999999999998 666 899999999999988888764432          4567899999965 555555 59999


Q ss_pred             cCCCCCceeEEEEecCcccccccCCccccccccCCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHHHHH
Q 044926          391 AKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLY  470 (569)
Q Consensus       391 ~~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~~l~  470 (569)
                      ++++  +.||||++|+.++.||+++|+.|+..|+++|||+|||+|++|+||+|++.+|++|+||.+|+.|+|.|||++|.
T Consensus       374 l~~~--~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~  451 (537)
T KOG1176|consen  374 LGPN--QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLL  451 (537)
T ss_pred             CCCC--CceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHH
Confidence            9988  88999999999999999999999999997799999999999999999999999999999999999999999999


Q ss_pred             cCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHHHHH
Q 044926          471 SNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI  550 (569)
Q Consensus       471 ~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l~~~  550 (569)
                      +||.|.||+|++.+++.+|+.++|+|+.+++..  ..+++|++++++++++|++|..++|+++||+|++|||+|+.|++.
T Consensus       452 ~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~--lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~  529 (537)
T KOG1176|consen  452 THPDVLEAAVVGIPDEVWGETPAAFVVLKKGST--LTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDI  529 (537)
T ss_pred             hCCCccEEEEEcccccccCCcceEEEEecCCCc--CCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHH
Confidence            999999999999999999999999999999766  899999999999999999999999999999999999999999999


Q ss_pred             HHhcCCC
Q 044926          551 AENMGSS  557 (569)
Q Consensus       551 ~~~~~~~  557 (569)
                      +.++...
T Consensus       530 ~~~~~~~  536 (537)
T KOG1176|consen  530 AKKLGSK  536 (537)
T ss_pred             HHhcccC
Confidence            9987653



>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query569
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 3e-58
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 2e-44
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 2e-31
3tsy_A 979 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Pr 5e-29
4fuq_A503 Crystal Structure Of Apo Matb From Rhodopseudomonas 3e-26
3qya_A582 Crystal Structure Of A Red-Emitter Mutant Of Lampyr 9e-25
4gxq_A506 Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimer 2e-24
4gxr_A503 Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Len 2e-24
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 3e-24
3ipl_A501 Crystal Structure Of O-Succinylbenzoic Acid-Coa Lig 2e-23
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 4e-23
4fut_A503 Crystal Structure Of Atp Bound Matb From Rhodopseud 2e-22
2d1t_A548 Crystal Structure Of The Thermostable Japanese Fire 7e-22
2d1q_A548 Crystal Structure Of The Thermostable Japanese Fire 9e-22
2d1s_A548 Crystal Structure Of The Thermostable Japanese Fire 1e-21
4g37_A555 Structure Of Cross-Linked Firefly Luciferase In Sec 9e-21
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 1e-20
4g36_A555 Photinus Pyralis Luciferase In The Adenylate-Formin 2e-20
3iep_A551 Firefly Luciferase Apo Structure (P41 Form) Length 3e-20
1ba3_A550 Firefly Luciferase In Complex With Bromoform Length 3e-20
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 5e-20
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 6e-20
3nyq_A505 Malonyl-Coa Ligase Ternary Product Complex With Met 2e-19
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 1e-17
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 5e-16
2qvx_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATIO 2e-15
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 2e-15
2qvz_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATIO 9e-15
3cw8_X504 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cb 2e-14
1t5d_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chl 2e-14
3dlp_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, 3e-14
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 4e-14
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 6e-14
1t5h_X504 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SE 8e-14
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 3e-13
3ivr_A509 Crystal Structure Of Putative Long-Chain-Fatty-Acid 8e-13
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 5e-13
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 3e-12
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 4e-12
2vsq_A 1304 Structure Of Surfactin A Synthetase C (Srfa-C), A N 6e-11
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 6e-09
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 6e-09
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 6e-09
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 3e-08
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 3e-08
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 4e-08
1amu_A563 Phenylalanine Activating Domain Of Gramicidin Synth 1e-06
3l8c_A521 Structure Of Probable D-Alanine--Poly(Phosphoribito 6e-05
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure

Iteration: 1

Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 166/543 (30%), Positives = 251/543 (46%), Gaps = 37/543 (6%) Query: 19 FLERAATVYGDSP--SIIYNNITY--TWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNV 74 FLERAA ++G S ++ + T+++ + R +L L ++G+ G V+ + N Sbjct: 23 FLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNH 82 Query: 75 PALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPP 134 E +FAVP AVL+T N RL + ++ +L H + K++ LF P Sbjct: 83 FRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVL---------------LFDP 127 Query: 135 DLKPPPLVLIXXXXXXXXXXXXHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIV 194 +L P LV + + + + E+L + DP +R E Sbjct: 128 NLLP--LVEAIRGELKTVQHFVVMDEKAPEGYLAYEEALGEEADP----VRV-PERAACG 180 Query: 195 LNYTSGTTMSPKGVVHCHRGIFI--VAVNTLSDWSVPTQPVYLWTLPMFHSNGWCFPWAM 252 + YT+GTT PKGVV+ HR + + +A + + ++ + V L +PMFH N WC P+A Sbjct: 181 MAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCLPYAA 240 Query: 253 AAVGGTNICIR-KFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRXXXXXXXXXXXXVHL 311 VG + + D + + +L GVT G P V L++Y L Sbjct: 241 TLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADY--LESTGHRLKTLRRL 298 Query: 312 VTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNXXXXXXXXXXXXRQG 371 V G+ P +++ R E +G +V GYGLTET +VV K + + G Sbjct: 299 VVGGSAAPRSLIARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTG 358 Query: 372 VKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMTDDGWFYT 431 + L + V D + G +DG LGE+ L+G I GY + TR +T DG+F T Sbjct: 359 L-PIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRT 416 Query: 432 GDVGVMHSDGYLEIKDRSKDVIIXXXXXXXXXXXXXXXXXXPAVNEAAVVARPDEFWGET 491 GD+ V +GY+EIKDR KD+I P V EAAVVA P W E Sbjct: 417 GDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQER 476 Query: 492 PCAFVSLKEGSKSKPTEKEMIEY-CRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVLREI 550 P A V + KPT +E+ E+ + + +P VF +E+P+TS GK K LRE Sbjct: 477 PLAVVVPR---GEKPTPEELNEHLLKAGFAKWQLPDAYVFAEEIPRTSAGKFLKRALREQ 533 Query: 551 AEN 553 +N Sbjct: 534 YKN 536
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein Length = 979 Back     alignment and structure
>pdb|4FUQ|A Chain A, Crystal Structure Of Apo Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|3QYA|A Chain A, Crystal Structure Of A Red-Emitter Mutant Of Lampyris Turkestanicus Luciferase Length = 582 Back     alignment and structure
>pdb|4GXQ|A Chain A, Crystal Structure Of Atp Bound Rpmatb-Bxbclm Chimera B1 Length = 506 Back     alignment and structure
>pdb|4GXR|A Chain A, Structure Of Atp Bound Rpmatb-Bxbclm Chimera B3 Length = 503 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|3IPL|A Chain A, Crystal Structure Of O-Succinylbenzoic Acid-Coa Ligase From Staphylococcus Aureus Subsp. Aureus Mu50 Length = 501 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|4FUT|A Chain A, Crystal Structure Of Atp Bound Matb From Rhodopseudomonas Palustris Length = 503 Back     alignment and structure
>pdb|2D1T|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Red-Color Emission S286n Mutant Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|2D1Q|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With Mgatp Length = 548 Back     alignment and structure
>pdb|2D1S|A Chain A, Crystal Structure Of The Thermostable Japanese Firefly Luciferase Complexed With High-Energy Intermediate Analogue Length = 548 Back     alignment and structure
>pdb|4G37|A Chain A, Structure Of Cross-Linked Firefly Luciferase In Second Catalytic Conformation Length = 555 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|4G36|A Chain A, Photinus Pyralis Luciferase In The Adenylate-Forming Conformation Bound To Dlsa Length = 555 Back     alignment and structure
>pdb|3IEP|A Chain A, Firefly Luciferase Apo Structure (P41 Form) Length = 551 Back     alignment and structure
>pdb|1BA3|A Chain A, Firefly Luciferase In Complex With Bromoform Length = 550 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|3NYQ|A Chain A, Malonyl-Coa Ligase Ternary Product Complex With Methylmalonyl-Coa And Amp Bound Length = 505 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|2QVX|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303G MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|2QVZ|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, I303A MUTATION, BOUND TO 3- Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3CW8|X Chain X, 4-chlorobenzoyl-coa Ligase/synthetase, Bound To 4cba-adenylate Length = 504 Back     alignment and structure
>pdb|1T5D|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE BOUND TO 4-Chlorobenzoate Length = 504 Back     alignment and structure
>pdb|3DLP|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE, MUTANT D402P, BOUND To 4cb Length = 504 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure
>pdb|1T5H|X Chain X, 4-Chlorobenzoyl-Coa LigaseSYNTHETASE UNLIGANDED, SELENOMETHIONINE Length = 504 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|3IVR|A Chain A, Crystal Structure Of Putative Long-Chain-Fatty-Acid Coa Ligase From Rhodopseudomonas Palustris Cga009 Length = 509 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A Nonribosomal Peptide Synthetase Termination Module Length = 1304 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1 In A Complex With Amp And Phenylalanine Length = 563 Back     alignment and structure
>pdb|3L8C|A Chain A, Structure Of Probable D-Alanine--Poly(Phosphoribitol) Ligase Subunit-1 From Streptococcus Pyogenes Length = 521 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query569
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 0.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 1e-169
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 1e-165
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 1e-161
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 1e-146
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-135
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 1e-134
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 1e-132
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 1e-128
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 1e-126
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 1e-125
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-122
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 1e-118
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 1e-117
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 1e-116
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 1e-100
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 3e-92
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 2e-81
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 4e-41
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 3e-38
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 3e-27
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-25
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 1e-25
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 2e-25
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 4e-25
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 6e-25
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 8e-25
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 2e-23
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 9e-23
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 1e-22
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 1e-13
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 7e-04
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
 Score =  700 bits (1808), Expect = 0.0
 Identities = 174/560 (31%), Positives = 263/560 (46%), Gaps = 35/560 (6%)

Query: 6   PSPANSTPLTPLVFLERAATVYGDSPSIIYNN----ITYTWSDTHHRCLQLASSLLSIGI 61
           PS      L    FLERAA ++G    +   +       T+++ + R  +L   L ++G+
Sbjct: 10  PSTMMDEELNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGV 69

Query: 62  SRGHVVSVVSPNVPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHS 121
             G  V+ +  N     E +FAVP   AVL+T N RL  + ++ +L H + K++  D + 
Sbjct: 70  GVGDRVATLGFNHFRHLEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNL 129

Query: 122 RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEF 181
             LV                V++ +       +               YE  + +     
Sbjct: 130 LPLVEAIRGELK---TVQHFVVMDEKAPEGYLA---------------YEEALGEEADPV 171

Query: 182 EWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFI--VAVNTLSDWSVPTQPVYLWTLP 239
                  E     + YT+GTT  PKGVV+ HR + +  +A + +   ++  + V L  +P
Sbjct: 172 RV----PERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVP 227

Query: 240 MFHSNGWCFPWAMAAVGGTNICI-RKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDP 298
           MFH N WC P+A   VG   +    + D + + +L    GVT   G P V   L++Y   
Sbjct: 228 MFHVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADY--L 285

Query: 299 DKKPLKLAKPVHLVTAGAPPPAAVLLRTESLGFKVSHGYGLTETGGIVVSCAWKRNWNLL 358
           +    +L     LV  G+  P +++ R E +G +V  GYGLTET  +VV    K +   L
Sbjct: 286 ESTGHRLKTLRRLVVGGSAAPRSLIARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESL 345

Query: 359 PAAEKAKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGCIMLGYLKDPIG 418
              EK  LKA+ G+    L  + V D   G    +DG  LGE+ L+G  I  GY  +   
Sbjct: 346 SEEEKLTLKAKTGL-PIPLVRLRVADE-EGRPVPKDGKALGEVQLKGPWITGGYYGNEEA 403

Query: 419 TRKCMTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEA 478
           TR  +T DG+F TGD+ V   +GY+EIKDR KD+I SGGE +SSV++E+ L  +P V EA
Sbjct: 404 TRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEA 463

Query: 479 AVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTS 538
           AVVA P   W E P A V  +    +   E+      +     + +P   VF +E+P+TS
Sbjct: 464 AVVAIPHPKWQERPLAVVVPRGEKPT--PEELNEHLLKAGFAKWQLPDAYVFAEEIPRTS 521

Query: 539 TGKIQKFVLREIAENMGSSS 558
            GK  K  LRE  +N    +
Sbjct: 522 AGKFLKRALREQYKNYYGGA 541


>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Length = 521 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304 Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Length = 511 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Length = 512 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Length = 563 Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Length = 620 Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Length = 369 Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Length = 443 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query569
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.96
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.5
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.47
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.78
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.75
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.68
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 92.3
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 92.07
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 91.99
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 80.42
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 80.04
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
Probab=100.00  E-value=9.7e-82  Score=662.37  Aligned_cols=514  Identities=25%  Similarity=0.373  Sum_probs=408.4

Q ss_pred             CCCCCCCchHHHHHHHHHHcCCCCeEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH
Q 044926            8 PANSTPLTPLVFLERAATVYGDSPSIIYNN--------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYE   79 (569)
Q Consensus         8 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~--------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~   79 (569)
                      ....+.+|+.++|+++++.+||++|+++.+        +++||+||.++++++|.+|.+.|+++||+|+|+++|++++++
T Consensus        13 ~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~   92 (549)
T 3g7s_A           13 SLYYPKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVM   92 (549)
T ss_dssp             CCCCCCCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHH
T ss_pred             CCCcCCCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH
Confidence            445688999999999999999999999987        899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccceEeeccCCCCHHHHHHHHhhcCCeEEEEccccHHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCC
Q 044926           80 LHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHP  159 (569)
Q Consensus        80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (569)
                      ++|||+++|++++|++|.++.+++.+++++++++++|++....+.+........    ...++..+..            
T Consensus        93 ~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~------------  156 (549)
T 3g7s_A           93 TIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTG----VERVFVVGGE------------  156 (549)
T ss_dssp             HHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSC----CCEEEEETCS------------
T ss_pred             HHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCC----CcEEEEeCCC------------
Confidence            999999999999999999999999999999999999999988887777665433    3445544322            


Q ss_pred             CCCCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHhhhhccCCCCCCCEEEEecC
Q 044926          160 NISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSDWSVPTQPVYLWTLP  239 (569)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~p  239 (569)
                             ...+.+++..............++|+++|+|||||||.||||.++|+++...+......+++..+|++++..|
T Consensus       157 -------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p  229 (549)
T 3g7s_A          157 -------VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMP  229 (549)
T ss_dssp             -------SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSC
T ss_pred             -------CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCc
Confidence                   2445555554433322222233489999999999999999999999999999988888899999999999999


Q ss_pred             chhhhhhhHHHHHHHhCceEEEeccCCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeCCCCc
Q 044926          240 MFHSNGWCFPWAMAAVGGTNICIRKFDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAGAPPP  319 (569)
Q Consensus       240 l~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g~~l~  319 (569)
                      ++|.+++...+.++..|+++++.+.+++..+++.++++++|+++++|+++..|++..........++++|.+++||++++
T Consensus       230 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~  309 (549)
T 3g7s_A          230 MFHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVA  309 (549)
T ss_dssp             TTSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCC
T ss_pred             HHHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCC
Confidence            99999998878888999999999999999999999999999999999999999887544442233449999999999999


Q ss_pred             HHHHHHHHh-----cC---CeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCccc
Q 044926          320 AAVLLRTES-----LG---FKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSA  391 (569)
Q Consensus       320 ~~~~~~~~~-----~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~  391 (569)
                      +++.+++.+     ++   +++++.||+||++++++.+...          ......++|.|.+++ +++|+|++++.++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~~~~-~~~i~d~~~g~~~  378 (549)
T 3g7s_A          310 PALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPL----------RLDKSTTQGVPMSDI-ELKVISLEDGREL  378 (549)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGG----------GGGGTTSCCEECTTC-EEEEECSSSCCEE
T ss_pred             HHHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCcc----------ccCcCCCccccCCCC-EEEEEeCCCCcCC
Confidence            999998874     45   8999999999998877654321          113456889999998 9999998899999


Q ss_pred             CCCCCceeEEEEecCcccccccCCccccccccC--CCC--eeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHH
Q 044926          392 KRDGSTLGEIVLRGGCIMLGYLKDPIGTRKCMT--DDG--WFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVES  467 (569)
Q Consensus       392 ~~~~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~~--~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~  467 (569)
                      +.|  +.|||+|+|++++.||+++++.+...|.  .+|  ||+|||+|++++||.+++.||.||+||++|++|+|.+||+
T Consensus       379 ~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~  456 (549)
T 3g7s_A          379 GVG--ESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPFELEA  456 (549)
T ss_dssp             CTT--CCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTSCEEEEEEC------------CHHHHH
T ss_pred             CCC--CceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHHHHHH
Confidence            988  8999999999999999999999999883  366  9999999999999999999999999999999999999999


Q ss_pred             HHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCHHHHHHHHhccCCCCccccEEEEecccCCCCCCcccHHHH
Q 044926          468 VLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTEKEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQKFVL  547 (569)
Q Consensus       468 ~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r~~l  547 (569)
                      +|.++|+|.+++|++.+++..|+.++++|++.++.....+.++|+++++++|+.|++|..++++++||+|++||++|++|
T Consensus       457 ~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~R~~L  536 (549)
T 3g7s_A          457 LLMKHEAVMDVAVIGKPDEEAGEVPKAFIVLKPEYRGKVDEEDIIEWVRERISGYKRVREVEFVEELPRTASGKLLRRLL  536 (549)
T ss_dssp             HHTTSTTEEEEEEECCCC------CEEEEEECSTTTTSCCHHHHHHHHHTTCC-----CCCCEEEECC------------
T ss_pred             HHHhCCCeeeEEEEeeEccccCceEEEEEEECCCccCcCCHHHHHHHHHHhccCcccceEEEEeccCCCCCCcCEeHHHH
Confidence            99999999999999999998899999999998774334788999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCC
Q 044926          548 REIAENMGSS  557 (569)
Q Consensus       548 ~~~~~~~~~~  557 (569)
                      ++++.+..+.
T Consensus       537 ~~~~~~~~~~  546 (549)
T 3g7s_A          537 REKEAEGHHH  546 (549)
T ss_dssp             ----------
T ss_pred             HHHhhccccc
Confidence            9988765543



>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 569
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-121
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 1e-118
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 1e-105
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 1e-102
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 1e-88
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 6e-87
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 1e-84
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
 Score =  369 bits (949), Expect = e-121
 Identities = 124/555 (22%), Positives = 210/555 (37%), Gaps = 36/555 (6%)

Query: 20  LERAATVYGDSPSIIY------NNITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPN 73
           L+R     GD  +II+       +   ++ + H    + A++LL +GI +G VV++  P 
Sbjct: 78  LDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPM 137

Query: 74  VPALYELHFAVPFAAAVLNTINTRLDARTVSLLLQHCQSKLVFVDFHSRALVREAVSLFP 133
           VP       A     AV + I        V+  +    S+LV          R       
Sbjct: 138 VPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKN 197

Query: 134 PDLKPPPLVLISDDDDAAVSSQSHHPNISDDQFFSTYESLVAKGDPEFEWIRPRTEWDPI 193
            D       + S +    +       +  + +    +  L+ K  PE +      E DP+
Sbjct: 198 VDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLW-WRDLIEKASPEHQPEAMNAE-DPL 255

Query: 194 VLNYTSGTTMSPKGVVHCHRGIFIVAVNTLSD-WSVPTQPVYLWTLPMFHSNGWCFP-WA 251
            + YTSG+T  PKGV+H   G  + A  T    +      +Y  T  +    G  +  + 
Sbjct: 256 FILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYG 315

Query: 252 MAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAK 307
             A G T +           + +  ++ +H V  +  AP  +  L    D   +    + 
Sbjct: 316 PLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSS 375

Query: 308 PVHLVTAGAPPPAAVLLRTESL----GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEK 363
              L + G P                   V   +  TETGG +++          P    
Sbjct: 376 LRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMIT----------PLPGA 425

Query: 364 AKLKARQGVKTTALTEVDVLDPKSGVSAKRDGSTLGEIVLRGGC--IMLGYLKDPIGTRK 421
            +LKA    +     +  ++D +      ++G+T G +V+             D     +
Sbjct: 426 IELKAGSATRPFFGVQPALVDNEGHP---QEGATEGNLVITDSWPGQARTLFGDHERFEQ 482

Query: 422 C--MTDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYSNPAVNEAA 479
               T    +++GD      DGY  I  R  DV+   G  L + E+ES L ++P + EAA
Sbjct: 483 TYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAA 542

Query: 480 VVARPDEFWGETPCAFVSLKEGSKSKP-TEKEMIEYCRGRLPHYMVPKTVVFMDELPKTS 538
           VV  P    G+   A+V+L  G +  P    E+  + R  +     P  + + D LPKT 
Sbjct: 543 VVGIPHAIKGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTR 602

Query: 539 TGKIQKFVLREIAEN 553
           +GKI + +LR+IA  
Sbjct: 603 SGKIMRRILRKIAAG 617


>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query569
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 82.93
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]
Probab=100.00  E-value=6e-77  Score=632.20  Aligned_cols=513  Identities=23%  Similarity=0.316  Sum_probs=422.2

Q ss_pred             HHHHHHHHHHcCCCCeEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHhhhccce
Q 044926           17 LVFLERAATVYGDSPSIIYNN------ITYTWSDTHHRCLQLASSLLSIGISRGHVVSVVSPNVPALYELHFAVPFAAAV   90 (569)
Q Consensus        17 ~~~l~~~a~~~p~~~al~~~~------~~~Ty~el~~~v~~~A~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~   90 (569)
                      .++|+++++.+||++|+++.+      +++||+||.++++++|.+|++.|+++||+|+++++|++++++++|||+++|++
T Consensus        75 ~n~ldrh~~~~~d~~Ali~~~~~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav  154 (643)
T d1pg4a_          75 ANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAV  154 (643)
T ss_dssp             HHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHHhCCCCEEEEEEecCCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeE
Confidence            567888999999999999642      68999999999999999999999999999999999999999999999999999


Q ss_pred             EeeccCCCCHHHHHHHHhhcCCeEEEEcccc---------HHHHHHHHhcCCCCCCCCCEEEEeCCCcccccccCCCCCC
Q 044926           91 LNTINTRLDARTVSLLLQHCQSKLVFVDFHS---------RALVREAVSLFPPDLKPPPLVLISDDDDAAVSSQSHHPNI  161 (569)
Q Consensus        91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (569)
                      ++|+++.++.+++.+++++++++++|+++..         ............ ......++++.......        ..
T Consensus       155 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~i~~~~~~~~~--------~~  225 (643)
T d1pg4a_         155 HSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPN-VTSVEHVIVLKRTGSDI--------DW  225 (643)
T ss_dssp             EEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTT-CCSCCEEEEECSSCCCC--------CC
T ss_pred             EEecCCCCCHHHHHHHHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccc-cccceEEEEeccCCccc--------cc
Confidence            9999999999999999999999999997642         333334333221 12245666665543211        00


Q ss_pred             CCCcccchhhHhhhcCCCCcccCCCCCCCCceEEEecCCCCCCCceEEEchHHHHHHHh-hhhccCCCCCCCEEEEecCc
Q 044926          162 SDDQFFSTYESLVAKGDPEFEWIRPRTEWDPIVLNYTSGTTMSPKGVVHCHRGIFIVAV-NTLSDWSVPTQPVYLWTLPM  240 (569)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~t~~~l~~~~~-~~~~~~~~~~~d~~~~~~pl  240 (569)
                      .... .....+......+.. .....+++|+++|+|||||||.||||+++|++++.... .....+++.++|++++..|+
T Consensus       226 ~~~~-~~~~~~~~~~~~~~~-~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~  303 (643)
T d1pg4a_         226 QEGR-DLWWRDLIEKASPEH-QPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADV  303 (643)
T ss_dssp             CBTT-EEEHHHHHTTSCSCC-CCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCT
T ss_pred             cccc-chhhhhhhcccCccc-CCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCCh
Confidence            1110 122333333333222 22345688999999999999999999999999765544 44556789999999999999


Q ss_pred             hhhhhhhH-HHHHHHhCceEEEecc----CCHHHHHHHHHHhCcceeechhHHHHHHHcCCCCCCCCCCcCCCceEEEeC
Q 044926          241 FHSNGWCF-PWAMAAVGGTNICIRK----FDASIIFDLIRRHGVTHMCGAPVVLNMLSNYRDPDKKPLKLAKPVHLVTAG  315 (569)
Q Consensus       241 ~~~~g~~~-~~~~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~~~~l~~~~~~g  315 (569)
                      +|++++.. ++++++.|+++++.+.    +++..+++.++++++|+++++|+++..|++..........+++||.++++|
T Consensus       304 ~~~~g~~~~l~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G  383 (643)
T d1pg4a_         304 GWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVG  383 (643)
T ss_dssp             TSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEES
T ss_pred             HHHHHHHHHHHHHHHhCCEEEEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEe
Confidence            99999876 5677889999998753    488999999999999999999999999998765443444445999999999


Q ss_pred             CCCcHHHHHHHH-hc---CCeeeecccccccccceeecccccccccCcHHHHhhhhcccCcccccceeeEEeCCCCCccc
Q 044926          316 APPPAAVLLRTE-SL---GFKVSHGYGLTETGGIVVSCAWKRNWNLLPAAEKAKLKARQGVKTTALTEVDVLDPKSGVSA  391 (569)
Q Consensus       316 ~~l~~~~~~~~~-~~---~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~  391 (569)
                      +++++++.+++. .+   ++++++.||+||+++++......         .......++|.|.++. +++|+|+ +|.++
T Consensus       384 ~pl~~~~~~~~~~~~g~~~~~i~~~yG~TE~g~~~~~~~~~---------~~~~~~gs~G~p~~g~-~v~ivd~-~g~~~  452 (643)
T d1pg4a_         384 EPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPG---------AIELKAGSATRPFFGV-QPALVDN-EGHPQ  452 (643)
T ss_dssp             SCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTT---------TCCBCTTCCBSBCTTC-CEEEECT-TCCBC
T ss_pred             CCCCHHHHHHHHHHhCCCCceEEEeechhhccceEEecCCC---------ccCCCCCccccccCCC-EEEEECC-CCCCC
Confidence            999999999887 44   58899999999998776543211         1122346789999998 9999998 67888


Q ss_pred             CCCCCceeEEEEec--CcccccccCCcccccccc--CCCCeeeecceEEEecCCcEEEeccCCCeEEeCceeeeHHHHHH
Q 044926          392 KRDGSTLGEIVLRG--GCIMLGYLKDPIGTRKCM--TDDGWFYTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVES  467 (569)
Q Consensus       392 ~~~~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~--~~~~~~~TGD~~~~~~dg~l~~~GR~~~~i~~~G~~v~~~~iE~  467 (569)
                      +.+  +.|||+|+|  |+++.||+++++.+...+  ..+|||+|||+|++++||++++.||+||+||++|++|+|.+||+
T Consensus       453 ~~g--~~Gel~v~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~  530 (643)
T d1pg4a_         453 EGA--TEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIES  530 (643)
T ss_dssp             CSS--EEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHH
T ss_pred             CCC--ceEEEEEecCCCcccccccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHH
Confidence            877  899999999  578899999988766554  34789999999999999999999999999999999999999999


Q ss_pred             HHHcCCCcceeEEEecCCCCCCceeEEEEEecCCCCCCCCH---HHHHHHHhccCCCCccccEEEEecccCCCCCCcccH
Q 044926          468 VLYSNPAVNEAAVVARPDEFWGETPCAFVSLKEGSKSKPTE---KEMIEYCRGRLPHYMVPKTVVFMDELPKTSTGKIQK  544 (569)
Q Consensus       468 ~l~~~~~i~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~~~~iP~t~~GKi~r  544 (569)
                      +|.+||+|.+|+|++.+++..|+.++++|++.++..  .+.   .+|+++++++|+++++|+.|+++++||+|++||++|
T Consensus       531 ~l~~~p~V~eaaVvg~~d~~~ge~~~a~Vv~~~~~~--~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R  608 (643)
T d1pg4a_         531 ALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEE--PSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMR  608 (643)
T ss_dssp             HHHHSTTEEEEEEEEEEETTTEEEEEEEEEECTTCC--CCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCH
T ss_pred             HHHhCCCcceEEEEEEECCCCCeEEEEEEEECCCCC--CCHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccH
Confidence            999999999999999999988999999999988765  333   579999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcC
Q 044926          545 FVLREIAENMG  555 (569)
Q Consensus       545 ~~l~~~~~~~~  555 (569)
                      ++|++++....
T Consensus       609 ~~Lr~~~~~~~  619 (643)
T d1pg4a_         609 RILRKIAAGDT  619 (643)
T ss_dssp             HHHHHHHHTC-
T ss_pred             HHHHHHhcCCc
Confidence            99999997643



>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure