Citrus Sinensis ID: 044944

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------76
HSYGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQNNLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDRDLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVVQQQPQEIRHKSKAFTKS
cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccccEEEEEEccccccHHHHHHHHHHccccccccEEEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEEEccccccHHHHHHHHHHccccEEEcccccccccccccccccHHHHHHHHHHHHcccccEEEEEEccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEEEEcccccccccccccccHHcHHHHHHHHHHHcccccEEEEEEEEcccHHHHHHHHHHcccccEEEEccccccccccccccccccccccccHHHHHHHccccccEEEEEEcccccccccccccccc
ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHEcHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHEEEHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHEHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHcccccHccccccccEEEEEEccccccHHHHHHHHHccccccccEEEEEEEEEEcccccccHEEHcccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEccHHHHHHHHHHHHHHccEEEEEEEccccccccccEccccHHHHHHHHHHHHccccEEEEEEEccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHccccEEEEEEEEccccccccccccHHHHHHcHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccccHHHcccccccHHHHccccccEEEEEEEEccccccccccccccc
hsygiwhhnplqsttpVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGgaiigpsilgddtstlfpmrnRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNgvsdaynsnpmkplymfpslfgfyctmffllrpLTIWIVSktaegesmkqsHFISIICIVLGvgfvgtcfgqgsflGCFVfglclpdgpplgtqlvnkldfftsgflIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVgylydpsrryKLDVRRAISKTKQNNLRILVCINKEENMNPIISLleasnptrnfpiTAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERsyhgnivvqhfttiapyasmhDDVCTLALDKRAAIIIVPFHkqwgvnclvesselpiralngnildkapcsvgvlvqrgkiksirptfdFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVssdpdtssgiettddrdldnhafdefkdsvvtKKITLRVEIVKDGIGTTRVIQTLTENFDLfivgknhdpcskvtlglsewieypelgiigdTLVNSSEEFSVLVVQQQpqeirhkskaftks
hsygiwhhnplqsttPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVrraisktkqnnlrILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGiettddrdldnhafdefkdsvvtkkitlrveivkdgigttRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLvvqqqpqeirhkskaftks
HSYGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMtslvvvtsvlKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVilsssffgisfiKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQNNLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDRDLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVVQQQPQEIRHKSKAFTKS
**YGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQNNLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVS*******************HAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVV*****************
HSYGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSR*******************ILVCINKEENMNPIISLLE******NFPITAFVLQLIELKGS**********************INAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHK*************PIRALNGNILDKAPCSVGVLVQRG*************SYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFV****************DLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHD***********WIEYPELGIIGDTLVNSSEEFSVLVVQ****************
HSYGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQNNLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDRDLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVVQ****************
**YGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQNNLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDRDLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVVQQQPQ************
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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HSYGIWHHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQNNLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDRDLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVVQQQPQEIRHKSKAFTKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query759 2.2.26 [Sep-21-2011]
Q9LMJ1829 Cation/H(+) antiporter 14 yes no 0.965 0.884 0.364 1e-146
O22920831 Cation/H(+) symporter 13 no no 0.957 0.874 0.376 1e-144
Q9SIT5821 Cation/H(+) antiporter 15 no no 0.963 0.890 0.351 1e-123
Q8VYD4867 Cation/H(+) antiporter 23 no no 0.968 0.847 0.304 1e-95
Q9FYC1817 Cation/H(+) antiporter 4 no no 0.935 0.869 0.316 5e-94
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.948 0.875 0.295 7e-92
Q9FFR9810 Cation/H(+) antiporter 18 no no 0.968 0.907 0.304 2e-90
Q9SKA9832 Cation/H(+) antiporter 21 no no 0.964 0.879 0.296 4e-90
Q9SUQ7820 Cation/H(+) antiporter 17 no no 0.955 0.884 0.304 1e-88
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.955 0.844 0.277 1e-86
>sp|Q9LMJ1|CHX14_ARATH Cation/H(+) antiporter 14 OS=Arabidopsis thaliana GN=CHX14 PE=2 SV=1 Back     alignment and function desciption
 Score =  518 bits (1334), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/746 (36%), Positives = 447/746 (59%), Gaps = 13/746 (1%)

Query: 9   NPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTSTL-- 66
           +PL+   P++LLQM VI +++R +Y LL+P  Q  + AQ+L G I+GPS+ G  ++ +  
Sbjct: 44  DPLKYAMPLMLLQMSVIIITSRLLYRLLKPLKQGMISAQVLAGIILGPSLFGQSSAYMQM 103

Query: 67  -FPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSF 125
             P+  +  L+T +  G  +H+F+LG++ID  +I+    +A+ IG     +P   G  + 
Sbjct: 104 FLPISGKITLQTLSNLGFFIHLFLLGLRIDASIIRKAGSKAILIGTASYALPFSLGNLTV 163

Query: 126 RLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSAAMVSDI 185
            L  +       +    I+  ++ N+MTS  V T+VL ELN+LNS+LGRLA++ ++V + 
Sbjct: 164 -LFLKNTYNLPPDVVHCISTVISLNAMTSFPVTTTVLAELNILNSDLGRLATNCSIVCEA 222

Query: 186 LSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAEG-ESMK 244
            SWI  ++            +  ++ F  +      +FF+ RP  IW+  + +   +   
Sbjct: 223 FSWIVALVFRMF---LRDGTLASVWSFVWVTALILVIFFVCRPAIIWLTERRSISIDKAG 279

Query: 245 QSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIP 304
           +  F  II ++L +       G  +  G F  G+ LPDGPPLGT L  KL+ F +  ++P
Sbjct: 280 EIPFFPIIMVLLTISLTSEVLGVHAAFGAFWLGVSLPDGPPLGTGLTTKLEMFATSLMLP 339

Query: 305 VFCAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMC 364
            F ++SG++   +++ ES  + +E +++++Y  KF G   +S++  I    A  LA +MC
Sbjct: 340 CFISISGLQTNFFIIGESHVKIIEAVILITYGCKFLGTAAASAYCNIQIGDAFSLALLMC 399

Query: 365 CRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRYKLDVRRAI 424
           C+G+ EI    MWKD+K + ++ F LLI  +++VT I+  +V  LYDPS+RY+   +R I
Sbjct: 400 CQGVIEIYTCVMWKDEKVLNTECFNLLIITLLLVTGISRFLVVCLYDPSKRYRSKSKRTI 459

Query: 425 SKTKQNNL--RILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKP 482
             T+Q NL  R+L+C+   EN+  +++LLEAS P+R  PI+ F L L+ELKG   A L P
Sbjct: 460 LDTRQRNLQFRLLLCVYNVENVPSMVNLLEASYPSRFSPISVFTLHLVELKGRAHAVLVP 519

Query: 483 YHQHTQ--SVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAA 540
           +HQ  +       STH++N F + E+   G ++ QHFT  AP++S++DD+CTLALDK+A 
Sbjct: 520 HHQMNKLDPNTVQSTHIVNGFQRFEQQNQGTLMAQHFTAAAPFSSINDDICTLALDKKAT 579

Query: 541 IIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSY 600
           +I++PFHKQ+ ++  V+     IR +N N+L+KAPCSVG+ + RG+ +  R         
Sbjct: 580 LIVIPFHKQYAIDGTVDHVNPSIRNINLNVLEKAPCSVGIFIDRGETEGRRSVLMSYTWR 639

Query: 601 HIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDRDLDNHAFD 660
           ++ ++F+ G DD EALA+S  + EHP +S+T++ F        + +   +    +++  +
Sbjct: 640 NVAVIFIEGRDDAEALAFSMRIAEHPEVSVTMIHFRHKSSLQQNHVVDVESELAESYLIN 699

Query: 661 EFKDSVVTK-KITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTLGLSEWIE 719
           +FK+  ++K KI+ R EIV+DG+ TT+VI +L ++FDL +VG++HD  S V  GL++W E
Sbjct: 700 DFKNFAMSKPKISYREEIVRDGVETTQVISSLGDSFDLVVVGRDHDLESSVLYGLTDWSE 759

Query: 720 YPELGIIGDTLVNSSEEFSVLVVQQQ 745
            PELG+IGD   +S   FSVLV+ QQ
Sbjct: 760 CPELGVIGDMFASSDFHFSVLVIHQQ 785
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis thaliana GN=CHX13 PE=1 SV=1 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYD4|CHX23_ARATH Cation/H(+) antiporter 23, chloroplastic OS=Arabidopsis thaliana GN=CHX23 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFR9|CHX18_ARATH Cation/H(+) antiporter 18 OS=Arabidopsis thaliana GN=CHX18 PE=2 SV=1 Back     alignment and function description
>sp|Q9SKA9|CHX21_ARATH Cation/H(+) antiporter 21 OS=Arabidopsis thaliana GN=CHX21 PE=2 SV=2 Back     alignment and function description
>sp|Q9SUQ7|CHX17_ARATH Cation/H(+) antiporter 17 OS=Arabidopsis thaliana GN=CHX17 PE=1 SV=1 Back     alignment and function description
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query759
225434427790 PREDICTED: cation/H(+) antiporter 14-lik 0.974 0.936 0.448 1e-171
297745811 1497 unnamed protein product [Vitis vinifera] 0.974 0.494 0.448 1e-171
356537620779 PREDICTED: cation/H(+) antiporter 14-lik 0.967 0.942 0.414 1e-166
356569482 1581 PREDICTED: uncharacterized protein LOC10 0.968 0.464 0.413 1e-162
357458003788 Cation/H+ exchanger [Medicago truncatula 0.974 0.939 0.407 1e-157
255545273819 monovalent cation:proton antiporter, put 0.959 0.888 0.409 1e-153
297843492829 ATCHX14 [Arabidopsis lyrata subsp. lyrat 0.965 0.884 0.368 1e-145
297826419830 ATCHX13 [Arabidopsis lyrata subsp. lyrat 0.957 0.875 0.375 1e-144
15222247829 cation/H(+) antiporter 14 [Arabidopsis t 0.965 0.884 0.364 1e-144
15227727831 cation/H(+) symporter 13 [Arabidopsis th 0.957 0.874 0.376 1e-142
>gi|225434427|ref|XP_002277552.1| PREDICTED: cation/H(+) antiporter 14-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 338/754 (44%), Positives = 466/754 (61%), Gaps = 14/754 (1%)

Query: 1   HSYGIW-HHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSIL 59
           HS GI+   +P   + P+LL Q ++I L TR  Y+ L+P  Q  + AQI+ G I+GPSIL
Sbjct: 29  HSKGIFLGDDPFNFSLPMLLAQGILILLLTRTTYYFLKPLGQGMISAQIIAGIIMGPSIL 88

Query: 60  GDD---TSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLI 116
           G D      LFP   + +L T A  G +LH+F++G+Q+D  ++K   + AV IG  G ++
Sbjct: 89  GHDGAYAEKLFPPGGKLVLETLANVGFMLHLFLVGLQMDPRILKKAGKTAVLIGIGGFIL 148

Query: 117 PLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLA 176
           P   G  +F +I    T  D + +  I   VA NSMTS VVV+S+L +LN+LNSELGRLA
Sbjct: 149 PYGLGELAFIIIHHVMT-LDRKLSVSIPFMVALNSMTSFVVVSSLLTDLNILNSELGRLA 207

Query: 177 SSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSK 236
           +  +MVSD+ SW    ++N V  A   +    L+    L  F  ++ F+ RP+ IWI  +
Sbjct: 208 TQTSMVSDLCSWFMATMMNTVGIAARDSDWMLLWSLIWLLIFLISIVFVFRPIIIWISKQ 267

Query: 237 TAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDF 296
           T EGE M +  F  II +++G  F     GQ + LG  V G+ LPDGPP+GT L+ K D 
Sbjct: 268 TPEGERMDEVLFFIIIVMIMGCAFCAEVLGQHAALGPLVLGMALPDGPPIGTILLQKFDT 327

Query: 297 FTSGFLIPVFCAMSGIRWEMYLLKESSTRKM-ELIMVMSYIGKFTGVILSSSFFGISFIK 355
             +G L+P+F A+SG + +++ L +     M E I+++ YIGKFTG ++ + F G+    
Sbjct: 328 MVTGLLLPIFFALSGSKTKLFSLGKGMFPFMVEFIIILGYIGKFTGTLIPAIFSGVPRWD 387

Query: 356 ASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRR 415
           + CLA IMCC+GI E+A Y MWKD+K ++ Q ++LL+  M+IVT +   +VGYLYDP+  
Sbjct: 388 SLCLAMIMCCKGIIEVATYSMWKDRKILSYQSYSLLLITMLIVTGVCRPIVGYLYDPASS 447

Query: 416 YKLDVRRAISKTKQNN-LRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKG 474
           +    R++I   K ++  RILVCI+ E N++ II+LLEAS+ T++ PI+   L L+EL G
Sbjct: 448 HMSYSRKSIMYPKHDSEFRILVCIHNEHNVSTIINLLEASHATKSSPISIVALCLMELTG 507

Query: 475 SVTAFLKPYHQHTQ--SVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCT 532
           S ++ L+ Y    +  S V    H+INAF   E+  HG + VQHFT IAPY+SMH D+C 
Sbjct: 508 SSSSVLESYDSKKKLTSGVTHLGHIINAFNYYEQHNHGRVTVQHFTAIAPYSSMHTDICA 567

Query: 533 LALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRP 592
           +AL+ RA I+IVPFHKQ       E++   I+ +N N++DKAPCSVG+LV RG I   R 
Sbjct: 568 IALEMRANIVIVPFHKQMAFGGTEEATATSIKTVNLNVIDKAPCSVGILVDRGHIGGHRS 627

Query: 593 TFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIETTDDR 652
                  YHI +LF+GGADDREAL+YSR M E P I LTVV F    P          + 
Sbjct: 628 FVAGHSLYHIALLFLGGADDREALSYSRRMAEDPKIRLTVVCF---RPWGEQAYTEETEE 684

Query: 653 DLDNHAFDEFKDSVVTKKITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDPCSKVTL 712
            LD    +EFK   V K +   V IVKDG GTT+VI+++ E FDLFIVG++HD  S  TL
Sbjct: 685 YLDKKLMNEFKADAVDKIVYSEV-IVKDGEGTTQVIRSMEEGFDLFIVGRHHDK-SPFTL 742

Query: 713 GLSEWIEYPELGIIGDTLVNSSEEFSVLVVQQQP 746
           GL+EW E  ELG+IGD L  S   FSVLVVQQQP
Sbjct: 743 GLTEWHECTELGLIGDMLAGSDFLFSVLVVQQQP 776

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297745811|emb|CBI15867.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356537620|ref|XP_003537324.1| PREDICTED: cation/H(+) antiporter 14-like [Glycine max] Back     alignment and taxonomy information
>gi|356569482|ref|XP_003552929.1| PREDICTED: uncharacterized protein LOC100804488 [Glycine max] Back     alignment and taxonomy information
>gi|357458003|ref|XP_003599282.1| Cation/H+ exchanger [Medicago truncatula] gi|355488330|gb|AES69533.1| Cation/H+ exchanger [Medicago truncatula] Back     alignment and taxonomy information
>gi|255545273|ref|XP_002513697.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223547148|gb|EEF48644.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297843492|ref|XP_002889627.1| ATCHX14 [Arabidopsis lyrata subsp. lyrata] gi|297335469|gb|EFH65886.1| ATCHX14 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297826419|ref|XP_002881092.1| ATCHX13 [Arabidopsis lyrata subsp. lyrata] gi|297326931|gb|EFH57351.1| ATCHX13 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15222247|ref|NP_172178.1| cation/H(+) antiporter 14 [Arabidopsis thaliana] gi|75311367|sp|Q9LMJ1.1|CHX14_ARATH RecName: Full=Cation/H(+) antiporter 14; AltName: Full=Protein CATION/H+ EXCHANGER 14; Short=AtCHX14 gi|8954048|gb|AAF82222.1|AC067971_30 Strong similarity to Na+/H+-exchanging protein homolog T27E13.2 gi|7487968 from Arabidopsis thaliana BAC T27E13 gb|AC002338 [Arabidopsis thaliana] gi|91805753|gb|ABE65605.1| cation/hydrogen exchanger [Arabidopsis thaliana] gi|152013343|gb|ABS19937.1| CHX14 [Arabidopsis thaliana] gi|332189940|gb|AEE28061.1| cation/H(+) antiporter 14 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15227727|ref|NP_180583.1| cation/H(+) symporter 13 [Arabidopsis thaliana] gi|75277347|sp|O22920.1|CHX13_ARATH RecName: Full=Cation/H(+) symporter 13; AltName: Full=Protein CATION/H+ EXCHANGER 13; Short=AtCHX13 gi|2347190|gb|AAC16929.1| putative Na/H antiporter [Arabidopsis thaliana] gi|20197104|gb|AAM14917.1| putative Na H antiporter [Arabidopsis thaliana] gi|154800382|gb|AAX49543.2| CHX3 [Arabidopsis thaliana] gi|330253267|gb|AEC08361.1| cation/H(+) symporter 13 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query759
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.967 0.883 0.372 9.8e-135
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.964 0.882 0.353 1.6e-134
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.963 0.890 0.344 4.9e-117
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.965 0.845 0.298 4.6e-89
TAIR|locus:2024578811 CHX16 "cation/H+ exchanger 16" 0.594 0.556 0.275 7.4e-85
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.865 0.804 0.322 7.2e-84
TAIR|locus:2084370842 CHX20 "cation/H+ exchanger 20" 0.722 0.650 0.278 7.4e-84
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.888 0.832 0.296 1.9e-83
TAIR|locus:2090462800 CHX19 "cation/H+ exchanger 19" 0.949 0.901 0.288 1.7e-82
TAIR|locus:2082102783 CHX10 "cation/H+ exchanger 10" 0.955 0.925 0.294 1.5e-81
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
 Identities = 283/759 (37%), Positives = 433/759 (57%)

Query:     2 SYGIW-HHNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILG 60
             S GI+   NPL+   P+LLLQM VI +++R I+ +L+P  Q  + AQ+L G ++GPS LG
Sbjct:    38 SRGIFMKSNPLKYALPLLLLQMSVIIVTSRLIFRVLQPLKQGMISAQVLTGVVLGPSFLG 97

Query:    61 DDT---STLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIP 117
              +    +   P   + I++T +  G ++H+F+LG++ID  +I+    +A+ IG      P
Sbjct:    98 HNVIYMNMFLPAGGKIIIQTLSNVGFVIHLFLLGLKIDGSIIRKAGSKAILIGTASYAFP 157

Query:   118 LIFGMSSFRLIQQQK-TRFDVESATGIAASVAANSMXXXXXXXXXXKELNMLNSELGRLA 176
                G  +   I +      DV S T  A S++  SM           ELN+LNSELGRLA
Sbjct:   158 FSLGNLTIMFISKTMGLPSDVISCTSSAISLS--SMTSFPVTTTVLAELNILNSELGRLA 215

Query:   177 SSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSK 236
             +  +MV ++ SW   +  N  +       M  LY    + G    ++F+ RP+ +W+  +
Sbjct:   216 THCSMVCEVCSWFVALAFNLYT---RDRTMTSLYALSMIIGLLLVIYFVFRPIIVWLTQR 272

Query:   237 TAEGESMKQS-HFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLD 295
               +    K    F  ++ ++      G   G  +  G F  G+ LPDGPPLGT+L  KL+
Sbjct:   273 KTKSMDKKDVVPFFPVLLLLSIASLSGEAMGVHAAFGAFWLGVSLPDGPPLGTELAAKLE 332

Query:   296 FFTSGFLIPVFCAMSGIRWEMYLLKESSTRKM---ELIMVMSYIGKFTGVXXXXXXXXXX 352
              F S   +P F A+SG++   + + ES    +   E+I++++Y  KF G           
Sbjct:   333 MFASNLFLPCFIAISGLQTNFFEITESHEHHVVMIEIILLITYGCKFLGTAAASAYCQTQ 392

Query:   353 XXKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDP 412
                A CLAF+MCC+GI E+    +WKD + + ++ F L+I  ++ VT I+  +V YLYDP
Sbjct:   393 IGDALCLAFLMCCQGIIEVYTTIVWKDAQVVDTECFNLVIITILFVTGISRFLVVYLYDP 452

Query:   413 SRRYKLDVRRAISKTKQNNL--RILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLI 470
             S+RYK   +R I  T+Q+NL  R+L+ +   EN+  +++LLEA+ PTR  PI+ F L L+
Sbjct:   453 SKRYKSKSKRTILNTRQHNLQLRLLLGLYNVENVPSMVNLLEATYPTRFNPISFFTLHLV 512

Query:   471 ELKGSVTAFLKPYHQHTQ--SVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHD 528
             ELKG   A L P+HQ  +     A STH++NAF + E+ Y G ++ QHFT  APY+S+++
Sbjct:   513 ELKGRAHALLTPHHQMNKLDPNTAQSTHIVNAFQRFEQKYQGALMAQHFTAAAPYSSINN 572

Query:   529 DVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIK 588
             D+CTLALDK+A +I++PFHKQ+ ++  V     PIR +N N+LD APCSV + + RG+ +
Sbjct:   573 DICTLALDKKATLIVIPFHKQYAIDGTVGQVNGPIRTINLNVLDAAPCSVAIFIDRGETE 632

Query:   589 SIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFVSSDPDTSSGIET 648
               R         ++ MLF+GG DD EALA    M E P++++T++ F        S ++ 
Sbjct:   633 GRRSVLMTNTWQNVAMLFIGGKDDAEALALCMRMAEKPDLNVTMIHFRHK-----SALQD 687

Query:   649 TDDRDLDNH-AFDEFKDSVVTK-KITLRVEIVKDGIGTTRVIQTLTENFDLFIVGKNHDP 706
              D  D+  +    +FK     K KI    EIV+DG+ TT+VI +L + +D+ +VG++HD 
Sbjct:   688 EDYSDMSEYNLISDFKSYAANKGKIHYVEEIVRDGVETTQVISSLGDAYDMVLVGRDHDL 747

Query:   707 CSKVTLGLSEWIEYPELGIIGDTLVNSSEEFSVLVVQQQ 745
              S V  GL++W E PELG+IGD L +    FSVLVV QQ
Sbjct:   748 ESSVLYGLTDWSECPELGVIGDMLTSPDFHFSVLVVHQQ 786
GO:0006812 "cation transport" evidence=IEA;IC
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0005886 "plasma membrane" evidence=IDA
GO:0006813 "potassium ion transport" evidence=IGI
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IGI;IMP;IDA
GO:0006814 "sodium ion transport" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024578 CHX16 "cation/H+ exchanger 16" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2084370 CHX20 "cation/H+ exchanger 20" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090462 CHX19 "cation/H+ exchanger 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082102 CHX10 "cation/H+ exchanger 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LMJ1CHX14_ARATHNo assigned EC number0.36460.96570.8841yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00023997001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (1525 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query759
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-166
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 3e-38
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 2e-31
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 9e-22
COG4651408 COG4651, RosB, Kef-type K+ transport system, predi 4e-06
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  500 bits (1289), Expect = e-166
 Identities = 285/774 (36%), Positives = 454/774 (58%), Gaps = 37/774 (4%)

Query: 2   SYGIWH-HNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILG 60
           + GIW   NPL  + P+ +LQ+ ++ ++TR + F+L+PF Q  V+++ILGG I+GPS+LG
Sbjct: 27  TNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLG 86

Query: 61  DDT---STLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIP 117
                 +T+FP+R+  +L T A  G++  +F++GV++D+ +I+   ++A+AI   G  +P
Sbjct: 87  QSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALP 146

Query: 118 LIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLAS 177
              G++ F  I  Q +R +V   T I     A S+T+  V+  +L E+ ++N+ELGR+A 
Sbjct: 147 FCIGLA-FSFIFHQVSR-NVHQGTFILFLGVALSVTAFPVLARILAEIKLINTELGRIAM 204

Query: 178 SAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKT 237
           SAA+V+D+ +WI   +   +++  +S  +  L++  S   F    F+++RP   WI+ +T
Sbjct: 205 SAALVNDMCAWILLALAIALAEN-DSTSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRT 263

Query: 238 AEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFF 297
            EGE+  + +   I+  V+  GF+    G  S  G FVFGL +P+GP LG  L+ KL+ F
Sbjct: 264 PEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPNGP-LGVTLIEKLEDF 322

Query: 298 TSGFLIPVFCAMSGIRWEMYLLKESSTRK-MELIMVMSYIGKFTGVILSSSFFGISFIKA 356
            SG L+P+F A+SG++  +  ++  +T   + L+++M+  GK  G I+ + F+ + F + 
Sbjct: 323 VSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREG 382

Query: 357 SCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDPSRRY 416
             L F+M  +G+ E+ +  + +D++ +  + FA+++   V +T++ + VV  +Y P+RR 
Sbjct: 383 ITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRL 442

Query: 417 KLDVRRAISKTKQN-NLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGS 475
               RR I ++K +  LR+LVC++   N+  II+LLEAS+PT+  PI  +VL L+EL G 
Sbjct: 443 VGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTGR 502

Query: 476 VTAFL------KPYHQHTQSVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDD 529
            +A L      K          A S H+INAF   E+   G + VQ  T I+PY++MH+D
Sbjct: 503 ASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAISPYSTMHED 561

Query: 530 VCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKS 589
           VC LA DKR ++II+PFHKQ  V+  +E++    R +N N+L  APCSVG+LV RG   +
Sbjct: 562 VCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSGA 621

Query: 590 IRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNISLTVVWFV------------- 636
            R     Q+S+H+ +LF GG DDREALAY+  M EHP I+LTV+ F+             
Sbjct: 622 TRLA-SNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPA 680

Query: 637 SSDPDTSSGIETTDD---RDLDNHAFDEFKDSVVTKKITLRVE-IVKDGIGTTRVIQTLT 692
           SS  D       TD    R LD    +EF+      +  +  E +V +G  T   I+++ 
Sbjct: 681 SSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSMD 740

Query: 693 ENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNS--SEEFSVLVVQQ 744
              DLFIVG+     S +T GL++W E PELG IGD L +S  +   SVLVVQQ
Sbjct: 741 SAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQ 794

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>gnl|CDD|226998 COG4651, RosB, Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 759
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 100.0
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.96
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.95
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.93
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.92
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.9
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.75
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.68
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.6
PRK11175305 universal stress protein UspE; Provisional 99.57
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.5
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.17
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.13
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.1
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.09
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 99.06
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.01
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.87
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.84
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 98.76
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.51
cd01987124 USP_OKCHK USP domain is located between the N-term 98.44
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 98.43
PRK15005144 universal stress protein F; Provisional 98.37
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 98.35
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.34
PRK15456142 universal stress protein UspG; Provisional 98.34
PRK15005144 universal stress protein F; Provisional 98.25
PRK09982142 universal stress protein UspD; Provisional 98.23
PRK15118144 universal stress global response regulator UspA; P 98.17
PRK09982142 universal stress protein UspD; Provisional 98.14
PRK15456142 universal stress protein UspG; Provisional 98.13
PF00582140 Usp: Universal stress protein family; InterPro: IP 98.1
PRK15118144 universal stress global response regulator UspA; P 98.07
cd00293130 USP_Like Usp: Universal stress protein family. The 98.01
cd00293130 USP_Like Usp: Universal stress protein family. The 98.01
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 98.0
PRK11175305 universal stress protein UspE; Provisional 97.99
cd01987124 USP_OKCHK USP domain is located between the N-term 97.99
PRK10116142 universal stress protein UspC; Provisional 97.98
PRK10116142 universal stress protein UspC; Provisional 97.9
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 97.83
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 97.8
TIGR00698335 conserved hypothetical integral membrane protein. 97.7
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 97.57
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.47
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 97.43
COG0589154 UspA Universal stress protein UspA and related nuc 97.3
COG0385319 Predicted Na+-dependent transporter [General funct 97.13
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 97.05
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 97.05
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 97.03
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 97.0
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 96.93
TIGR00832328 acr3 arsenical-resistance protein. The first prote 96.86
COG3493438 CitS Na+/citrate symporter [Energy production and 96.25
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.24
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 96.19
PRK03562 621 glutathione-regulated potassium-efflux system prot 96.16
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 96.12
COG0589154 UspA Universal stress protein UspA and related nuc 96.03
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 95.89
PRK10669558 putative cation:proton antiport protein; Provision 95.82
PF03956191 DUF340: Membrane protein of unknown function (DUF3 95.75
COG2855334 Predicted membrane protein [Function unknown] 95.72
TIGR00841286 bass bile acid transporter. Functionally character 95.72
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.72
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 95.69
PRK03659601 glutathione-regulated potassium-efflux system prot 95.67
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 95.63
COG2855334 Predicted membrane protein [Function unknown] 95.53
PRK12652357 putative monovalent cation/H+ antiporter subunit E 95.4
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 95.32
PRK05326562 potassium/proton antiporter; Reviewed 95.12
PRK03818552 putative transporter; Validated 95.01
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 94.37
TIGR00698335 conserved hypothetical integral membrane protein. 94.25
COG3180352 AbrB Putative ammonia monooxygenase [General funct 94.16
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 93.71
PLN03159832 cation/H(+) antiporter 15; Provisional 93.35
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 92.81
PRK04972558 putative transporter; Provisional 92.52
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 92.44
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 92.32
TIGR03802562 Asp_Ala_antiprt aspartate-alanine antiporter. All 92.26
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 91.99
PRK10490 895 sensor protein KdpD; Provisional 91.91
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 91.66
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 91.18
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 90.61
PRK04972558 putative transporter; Provisional 90.52
TIGR00946321 2a69 he Auxin Efflux Carrier (AEC) Family. 90.38
TIGR00808254 malonate_madM malonate transporter, MadM subunit. 89.82
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 89.48
PRK03818552 putative transporter; Validated 88.39
TIGR00210398 gltS sodium--glutamate symport carrier (gltS). 88.38
COG2985544 Predicted permease [General function prediction on 88.37
TIGR00930953 2a30 K-Cl cotransporter. 88.12
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 87.92
PRK04288232 antiholin-like protein LrgB; Provisional 85.28
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 84.78
PRK10490 895 sensor protein KdpD; Provisional 84.05
PF02040423 ArsB: Arsenical pump membrane protein; InterPro: I 83.87
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 83.29
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 82.34
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 82.29
TIGR01109354 Na_pump_decarbB sodium ion-translocating decarboxy 81.93
KOG0573 520 consensus Asparagine synthase [Amino acid transpor 80.9
COG2985544 Predicted permease [General function prediction on 80.52
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=8.6e-155  Score=1371.21  Aligned_cols=740  Identities=37%  Similarity=0.664  Sum_probs=676.4

Q ss_pred             CCCCccc-cCCCCccHHHHHHHHHHHHHHHHHHHHHHcccCCchhHHHHHHHHhcCcccccCcCC---CcCCCCchHHHH
Q 044944            1 HSYGIWH-HNPLQSTTPVLLLQMVVIFLSTRAIYFLLRPFHQTTVMAQILGGAIIGPSILGDDTS---TLFPMRNRHILR   76 (759)
Q Consensus         1 ~s~g~~~-~~pl~~~l~~~ll~l~lil~~~~l~~~l~~rl~~P~iv~~IlaGiilGP~~lg~~~~---~~fp~~~~~~l~   76 (759)
                      +|+|+|+ +||++|++|++++|+++++++++++++++||+|||+++|||++|+++||+++|.++.   .+||.++.+.++
T Consensus        26 ~s~g~~~g~~pl~~~l~~~llql~lil~~a~l~~~ll~rl~~P~ivgeIlaGIlLGPs~lg~i~~~~~~~fp~~~~~~l~  105 (832)
T PLN03159         26 TTNGIWQGDNPLDFSLPLFILQLTLVVVTTRLLVFILKPFRQPRVISEILGGVILGPSVLGQSEVFANTIFPLRSVMVLE  105 (832)
T ss_pred             cCCcccccCCcccchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHhcCHhhhCcChhhhhhcCCcchHHHHH
Confidence            5899999 999999999999999999999999999999999999999999999999999999865   678988888999


Q ss_pred             HHHHHHHHHHHHHHhhhcChhHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhhccccchhhHHHHHHHHHHhhccHH
Q 044944           77 TFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLV  156 (759)
Q Consensus        77 ~l~~lgl~~llF~~Gle~d~~~l~~~~~~~~~ia~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~ig~~ls~Ts~~  156 (759)
                      +++++|++++||++|+|+|++.+||++|+++.+|+.++++||++|++++++++....  .......++++|+++|.||+|
T Consensus       106 ~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~~~~l~~~~~--~~~~~~~~l~~g~alS~Ts~p  183 (832)
T PLN03159        106 TMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAFSFIFHQVSR--NVHQGTFILFLGVALSVTAFP  183 (832)
T ss_pred             HHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc--ccchhHHHHHHHHHHHHhhHH
Confidence            999999999999999999999999999999999999999999999988887743211  112235678999999999999


Q ss_pred             HHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044944          157 VVTSVLKELNMLNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSK  236 (759)
Q Consensus       157 vv~~iL~el~l~~s~~g~l~ls~a~i~D~~~~~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~l~~~  236 (759)
                      +++++|+|+|+++++.||+++++++++|+++|++++++.++...+. +....++.++..++|++++.+++||++.|+.++
T Consensus       184 Vv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~-~~~~~l~~~l~~~~f~~~~~~v~r~~~~~~~r~  262 (832)
T PLN03159        184 VLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDS-TSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRR  262 (832)
T ss_pred             HHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999998877654332 223456777777888888899999999999999


Q ss_pred             cccCCCCcchHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHhhcCCCCCchhHHHhHHhhhhhhhhHHHHHHHhcccccc
Q 044944          237 TAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGPPLGTQLVNKLDFFTSGFLIPVFCAMSGIRWEM  316 (759)
Q Consensus       237 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~G~~~~lGafvaGl~i~~~~~~~~~l~~kl~~~~~~~~~PlFF~~~G~~~dl  316 (759)
                      ++++++.++.++.++++++++++++++.+|+|+++|||++|+++|+ +|+++++.+|++++++++|+|+||+++|+++|+
T Consensus       263 ~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~-~~~~~~l~ekle~~~~~lflPlFFv~vGl~idl  341 (832)
T PLN03159        263 TPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-GPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNV  341 (832)
T ss_pred             CcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCC-cchHHHHHHHHHHHHHHHHHHHHHHHhhheeeH
Confidence            9988888999999999999999999999999999999999999998 678999999999999999999999999999999


Q ss_pred             cccccc-hhhHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHhhhcchhhHHHHhhhcccCcCchhHHHHHHHHH
Q 044944          317 YLLKES-STRKMELIMVMSYIGKFTGVILSSSFFGISFIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANM  395 (759)
Q Consensus       317 ~~l~~~-~~~~~~~i~~~~~~~K~i~~~l~~~~~~~~~~~~~~lgl~m~~kG~v~l~~~~~~~~~~~i~~~~~~~~v~~~  395 (759)
                      ..+.+. .|..+++++++++++|+++++++++++|+|++|++.+|++||+||++++++++++++.|+++++.|+++++++
T Consensus       342 ~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~lm~~kG~~~Lii~~ig~~~gvi~~~~f~~lVl~a  421 (832)
T PLN03159        342 TKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVA  421 (832)
T ss_pred             HHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccHHHHHHHHHHHhcCccCchhhhHHHHHH
Confidence            887654 4655667778889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCccccchhhcccccccCCCc-cceeeeeecCCCChHHHHHHHHhhCCCCCCCceEEEEEeeeecC
Q 044944          396 VIVTSIASAVVGYLYDPSRRYKLDVRRAISKTKQN-NLRILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKG  474 (759)
Q Consensus       396 lv~t~i~~plv~~l~~~~~~~~~~~~r~i~~~~~~-elriL~cv~~~~~~~~li~Ll~~~~~~~~sp~~v~~lhLvel~~  474 (759)
                      +++|++++|++.++|+|+||+..|++|++|+.+++ |+|+|+|+|+++++|++++|+|++++++++|+++|++||+|+++
T Consensus       422 vl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~~~v~~li~Lle~s~~t~~sp~~vy~lhLveL~~  501 (832)
T PLN03159        422 VAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKRSPICIYVLHLVELTG  501 (832)
T ss_pred             HHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccCCcHHHHHHHHHhcCCCCCCCceEEEEEEEeecC
Confidence            88899999999999999999999999999999999 99999999999999999999999999999999999999999999


Q ss_pred             Ccccccccccc-ccc-----ccccchhHHHHHHHHHHHhcCCceEEEEEEEEccCCChHHHHHHHHhhcCCcEEEecCCC
Q 044944          475 SVTAFLKPYHQ-HTQ-----SVVASSTHLINAFAQLERSYHGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHK  548 (759)
Q Consensus       475 r~~~~~~~~~~-~~~-----~~~~~~~~i~~af~~~~~~~~~~v~v~~~t~vs~~~~m~~dI~~~A~~~~~~lIilp~h~  548 (759)
                      |++|++++|+. ++.     +..+++|+++++|++|++++ +.++++++|++|||++||||||++|+||++|+||+||||
T Consensus       502 r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~~~t~vs~~~~mh~dIc~~A~d~~~slIilpfhk  580 (832)
T PLN03159        502 RASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHK  580 (832)
T ss_pred             CCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEEEEEEEeCcccHHHHHHHHHHhcCCCEEEECCCC
Confidence            99999999986 221     13356899999999999764 579999999999999999999999999999999999999


Q ss_pred             CCccccccccCchhhHHHHHhhhhcCCcceEEEeeCCCCCCCCcccCCCcceEEEEeeccCcChHHHHHHHHHHhhCCCe
Q 044944          549 QWGVNCLVESSELPIRALNGNILDKAPCSVGVLVQRGKIKSIRPTFDFQLSYHIVMLFVGGADDREALAYSRLMVEHPNI  628 (759)
Q Consensus       549 ~~~~~g~~~~~~~~~~~~n~~vl~~ApCsVgIlvdrg~~~~~~~~~~~~~~~~i~~~f~GG~ddreAL~~a~rma~~~~v  628 (759)
                      +|+.||+++++++.+|.+|+|||++||||||||||||... ..+.+..+..+||+++|+|||||||||+||+|||+||++
T Consensus       581 ~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~-~~~~~~~~~~~~v~~~F~GG~DDREALa~a~rma~~p~v  659 (832)
T PLN03159        581 QQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSG-ATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGI  659 (832)
T ss_pred             ccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCc-cccccccccceeEEEEecCCcchHHHHHHHHHHhcCCCe
Confidence            9999999999999999999999999999999999999763 222334556789999999999999999999999999999


Q ss_pred             EEEEEEeeeCCCCCC----------------CCCCCCcchhhHHHHHHHhhhhc-CCCCeEEEEEEeCChhhHHHHHHhh
Q 044944          629 SLTVVWFVSSDPDTS----------------SGIETTDDRDLDNHAFDEFKDSV-VTKKITLRVEIVKDGIGTTRVIQTL  691 (759)
Q Consensus       629 ~ltv~r~~~~~~~~~----------------~~~~~~~~~~~d~~~~~~~~~~~-~~~~v~~~e~~v~~~~e~~~~i~~~  691 (759)
                      ++||+||++.++..+                ..++++.|+++||++++|||.++ .+++|.|+||+|+||+||+++||+|
T Consensus       660 ~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~~ef~~~~~~~~~v~y~E~~V~~~~e~~~~l~~~  739 (832)
T PLN03159        660 TLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEKVVSNGEETVAAIRSM  739 (832)
T ss_pred             EEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHHh
Confidence            999999997543211                01224568899999999999999 7789999999999999999999999


Q ss_pred             ccCCcEEEEccCCCCCccccccCCcCCCCCccchhhhhhhcCCCCC--ceEEEeecc
Q 044944          692 TENFDLFIVGKNHDPCSKVTLGLSEWIEYPELGIIGDTLVNSSEEF--SVLVVQQQP  746 (759)
Q Consensus       692 ~~~~DL~iVGr~~~~~~~~~~gl~~w~e~~eLG~igd~las~d~~~--SvLvvqq~~  746 (759)
                      +++|||+||||+|+.+|++|+||+||+||||||+|||+|||+||.+  ||||||||.
T Consensus       740 ~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~~SVLVvQQ~~  796 (832)
T PLN03159        740 DSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATVSVLVVQQYV  796 (832)
T ss_pred             hccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCceeEEEEEeec
Confidence            9999999999999888999999999999999999999999999988  999999997

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PRK04972 putative transporter; Provisional Back     alignment and domain information
>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family Back     alignment and domain information
>TIGR00808 malonate_madM malonate transporter, MadM subunit Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PRK03818 putative transporter; Validated Back     alignment and domain information
>TIGR00210 gltS sodium--glutamate symport carrier (gltS) Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>PF02040 ArsB: Arsenical pump membrane protein; InterPro: IPR000802 Arsenic is a toxic metalloid whose trivalent and pentavalent ions inhibit a variety of biochemical processes Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR01109 Na_pump_decarbB sodium ion-translocating decarboxylase, beta subunit Back     alignment and domain information
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism] Back     alignment and domain information
>COG2985 Predicted permease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query759
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 48.7 bits (115), Expect = 6e-06
 Identities = 77/565 (13%), Positives = 153/565 (27%), Gaps = 141/565 (24%)

Query: 5   IWHHNPLQSTTPVLLLQMVVI---FLSTRAIYFLLRPFHQTTV--MAQILGGAIIGPSIL 59
           I   + L +   V     V     +L  R     LRP     +  +     G+  G + +
Sbjct: 113 IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV----LGS--GKTWV 166

Query: 60  GDDTSTLFPMRNRHILRTFAEFGMILHIFVLGVQIDLGLIKHIRRRAVAIGFFGCLIPLI 119
             D        +  +     +F     IF     ++L            +          
Sbjct: 167 ALDV-----CLSYKVQCKM-DFK----IF----WLNLKN----CNSPETV---------- 198

Query: 120 FGMSSFRLIQQQKTRFDVESATGIAASVAANSMTSLVVVTSVLKELNMLNSELGRLASSA 179
                  L   QK  + ++      +  ++N          +   ++ + +EL RL  S 
Sbjct: 199 -------LEMLQKLLYQIDPNWTSRSDHSSN----------IKLRIHSIQAELRRLLKSK 241

Query: 180 AMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFLLRPLTIWIVSKTAE 239
              + +L      +L  V +A   N           F   C +    R   +     T  
Sbjct: 242 PYENCLL------VLLNVQNAKAWNA----------FNLSCKILLTTRFKQV-----TDF 280

Query: 240 GESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCF--VFGLCLPDGPPLGTQLVNKLDFF 297
             +   +H IS+    +                           D P             
Sbjct: 281 LSAATTTH-ISLDHHSMT-------LTPDEVKSLLLKYLDCRPQDLPREVLT-------- 324

Query: 298 TSGFLIPVFCAM---SGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSF--FGIS 352
           T+   + +           W+ +  K  +  K+  I+  S +           F    + 
Sbjct: 325 TNPRRLSIIAESIRDGLATWDNW--KHVNCDKLTTIIESS-LNVLEPAEYRKMFDRLSV- 380

Query: 353 FIKASCLAFIMCCRGIPEIAMYCMWKDKKTITSQIFALLIANMVIVTSIASAVVGYLYDP 412
           F  ++          IP I +  +W D       +    +    +V          +   
Sbjct: 381 FPPSA---------HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

Query: 413 SRRY--KLDVRRAISKTKQNNLRILVCINKEENMNPIIS----------LLEASNPTRN- 459
                 KL+   A+ ++  ++  I    + ++ + P +           L    +P R  
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMT 491

Query: 460 -FPITAFVLQLIELK-----------GSVTAFL---KPYHQHTQSVVASSTHLINAFAQL 504
            F +     + +E K           GS+   L   K Y  +          L+NA    
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 505 ERSYHGNIVVQHFTTIAPYASMHDD 529
                 N++   +T +   A M +D
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAED 576

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query759
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.9
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.61
3olq_A319 Universal stress protein E; structural genomics, P 99.55
3loq_A294 Universal stress protein; structural genomics, PSI 99.54
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.51
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.47
3fdx_A143 Putative filament protein / universal stress PROT; 98.53
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.45
3s3t_A146 Nucleotide-binding protein, universal stress PROT 98.45
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.45
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 98.43
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.42
3dlo_A155 Universal stress protein; unknown function, struct 98.41
3fdx_A143 Putative filament protein / universal stress PROT; 98.37
3tnj_A150 Universal stress protein (USP); structural genomic 98.37
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.36
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.35
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 98.35
2z08_A137 Universal stress protein family; uncharacterized c 98.34
3dlo_A155 Universal stress protein; unknown function, struct 98.31
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.31
2z08_A137 Universal stress protein family; uncharacterized c 98.3
3tnj_A150 Universal stress protein (USP); structural genomic 98.29
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 98.29
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 98.27
3fg9_A156 Protein of universal stress protein USPA family; A 98.26
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.25
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 98.24
3fg9_A156 Protein of universal stress protein USPA family; A 98.21
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.17
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.08
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.97
1q77_A138 Hypothetical protein AQ_178; structural genomics, 97.92
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 97.89
3ab8_A 268 Putative uncharacterized protein TTHA0350; tandem- 97.75
3olq_A319 Universal stress protein E; structural genomics, P 97.74
3cis_A 309 Uncharacterized protein; alpha/beta hydrolase, ATP 97.62
3mt0_A 290 Uncharacterized protein PA1789; structural genomic 97.61
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.56
3loq_A294 Universal stress protein; structural genomics, PSI 97.56
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 95.63
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.90  E-value=4.5e-24  Score=229.79  Aligned_cols=300  Identities=12%  Similarity=0.116  Sum_probs=214.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhcChhHH----Hhhhh--hhHHHHHHHHHHHHHHHHHHHHHHhhhhccccchhhHHHHHH
Q 044944           73 HILRTFAEFGMILHIFVLGVQIDLGLI----KHIRR--RAVAIGFFGCLIPLIFGMSSFRLIQQQKTRFDVESATGIAAS  146 (759)
Q Consensus        73 ~~l~~l~~lgl~~llF~~Gle~d~~~l----~~~~~--~~~~ia~~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~l~i  146 (759)
                      .....+.+-.+.+++|.+|+|+|.+.+    ++.+|  .....++.++++|++++.    .+....        ..+...
T Consensus        58 ~l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~----~~~~~~--------~~~~~g  125 (388)
T 1zcd_A           58 NMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL----AFNYAD--------PITREG  125 (388)
T ss_dssp             EHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG----GGCCSS--------TTHHHH
T ss_pred             cHHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHhcCC--------hhhhhh
Confidence            356778888999999999999999877    55544  368889999999998842    222111        234566


Q ss_pred             HHHHhhccHHHHHHHHHhccc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHHHHHH
Q 044944          147 VAANSMTSLVVVTSVLKELNM-LNSELGRLASSAAMVSDILSWITCMILNGVSDAYNSNPMKPLYMFPSLFGFYCTMFFL  225 (759)
Q Consensus       147 g~~ls~Ts~~vv~~iL~el~l-~~s~~g~l~ls~a~i~D~~~~~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  225 (759)
                      ..+.+.|+.+....++..++. .++..++.+++.|++||+.+|++++++..   + ..   ...+ +...+++++..   
T Consensus       126 w~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~-~~---~~~~-l~~~~~~~~~~---  194 (388)
T 1zcd_A          126 WAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---N-DL---SMAS-LGVAAVAIAVL---  194 (388)
T ss_dssp             TSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---C-CC---CHHH-HHHHHHHHHHH---
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---C-Cc---cHHH-HHHHHHHHHHH---
Confidence            677778999999999999865 45566699999999999999999998863   1 11   1111 11111111111   


Q ss_pred             HHHHHHHHHhhcccCCCCcchHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHhhcCCCC----CchhHHHhHHhhhhhhh
Q 044944          226 LRPLTIWIVSKTAEGESMKQSHFISIICIVLGVGFVGTCFGQGSFLGCFVFGLCLPDGP----PLGTQLVNKLDFFTSGF  301 (759)
Q Consensus       226 ~r~~~~~l~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~G~~~~lGafvaGl~i~~~~----~~~~~l~~kl~~~~~~~  301 (759)
                            ++.+|..    +++...+..+ . +.+.+.++..|+|+.+|+|++|+++|..+    +..+++++++++++..+
T Consensus       195 ------~~l~r~~----v~~~~~y~~l-g-l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~  262 (388)
T 1zcd_A          195 ------AVLNLCG----ARRTGVYILV-G-VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYL  262 (388)
T ss_dssp             ------HHHHHTT----CCCTHHHHHH-H-HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHT
T ss_pred             ------HHHHHhc----chhHHHHHHH-H-HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHH
Confidence                  1222211    2223334433 2 24457779999999999999999999853    45789999999999999


Q ss_pred             hHHHH-HHHhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHhh----------CCChHHHHHHHHHhhhcchhh
Q 044944          302 LIPVF-CAMSGIRWEMYLLKESSTRKMELIMVMSYIGKFTGVILSSSFF----------GISFIKASCLAFIMCCRGIPE  370 (759)
Q Consensus       302 ~~PlF-F~~~G~~~dl~~l~~~~~~~~~~i~~~~~~~K~i~~~l~~~~~----------~~~~~~~~~lgl~m~~kG~v~  370 (759)
                      ++|+| |+..|.++|...+....-.....+++..+++|++|++..++..          |++++|...+|++++.+++++
T Consensus       263 ilPlFaFanaGv~l~~~~~~~l~~~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftms  342 (388)
T 1zcd_A          263 ILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMS  342 (388)
T ss_dssp             HHHHHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHH
T ss_pred             HHHHHHHHhcCeeecccchhhccChHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHH
Confidence            99999 9999999997532211001122444555899999955555544          999999999999999999999


Q ss_pred             HHHHhhhcccCc--CchhHHHHHHHHHHHHHHHHHHH-HHH
Q 044944          371 IAMYCMWKDKKT--ITSQIFALLIANMVIVTSIASAV-VGY  408 (759)
Q Consensus       371 l~~~~~~~~~~~--i~~~~~~~~v~~~lv~t~i~~pl-v~~  408 (759)
                      +++++.+++.+.  +.++.+..+++++++ |.+.+|+ +++
T Consensus       343 L~Ia~laf~~~~~~~~~~ak~~il~~s~~-s~i~g~~~L~~  382 (388)
T 1zcd_A          343 IFIASLAFGSVDPELINWAKLGILVGSIS-SAVIGYSWLRV  382 (388)
T ss_dssp             HHHHHHHSTTSSCSSHHHHHHHHHHHHHT-TTSTTTGGGTT
T ss_pred             HHHHHHhccCCchhhHhhHHHHHHHHHHH-HHHHHHHHHHH
Confidence            999999998876  356778888888888 5555554 443
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query759
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.62
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.61
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 98.54
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.46
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.42
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 98.36
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 98.36
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.33
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.18
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.17
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 97.58
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 97.26
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.62  E-value=1.5e-07  Score=87.15  Aligned_cols=138  Identities=14%  Similarity=0.181  Sum_probs=89.4

Q ss_pred             eeeeeecCCCChHHHHHHHHhhCCCCCCCceEEEEEeeeecCCccccccc-cc---ccc---cc-----cccchhHHHHH
Q 044944          433 RILVCINKEENMNPIISLLEASNPTRNFPITAFVLQLIELKGSVTAFLKP-YH---QHT---QS-----VVASSTHLINA  500 (759)
Q Consensus       433 riL~cv~~~~~~~~li~Ll~~~~~~~~sp~~v~~lhLvel~~r~~~~~~~-~~---~~~---~~-----~~~~~~~i~~a  500 (759)
                      |||+|++..+....+++.+..+....+  ..++++|+++......+-... ..   ...   +.     .....++..+.
T Consensus         5 ~ILvavD~s~~s~~al~~a~~la~~~~--a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
T d1mjha_           5 KILYPTDFSETAEIALKHVKAFKTLKA--EEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK   82 (160)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHTCCSSC--CEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCCHHHHHHHHHHHHHHHhcC--CEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            799999998888889998877765443  699999999876432211110 00   000   00     00111222223


Q ss_pred             HHHHHHhc-CCceEEEEEEEEccCCChHHHHHHHHhhcCCcEEEecCCCCCccccccccCchhhHHHHHhhhhcCCcceE
Q 044944          501 FAQLERSY-HGNIVVQHFTTIAPYASMHDDVCTLALDKRAAIIIVPFHKQWGVNCLVESSELPIRALNGNILDKAPCSVG  579 (759)
Q Consensus       501 f~~~~~~~-~~~v~v~~~t~vs~~~~m~~dI~~~A~~~~~~lIilp~h~~~~~~g~~~~~~~~~~~~n~~vl~~ApCsVg  579 (759)
                      ++.+.+.. ...+.++......   +..+.||+.|++.++|+|++|.|++....+.      .++++.++|++++||||.
T Consensus        83 l~~~~~~~~~~gv~~~~~~~~G---~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~------~~GS~a~~vl~~s~~pVl  153 (160)
T d1mjha_          83 MENIKKELEDVGFKVKDIIVVG---IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEI------LLGSVTENVIKKSNKPVL  153 (160)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEE---CHHHHHHHHHHHTTCSEEEEESCCSSCCTTC------SSCHHHHHHHHHCCSCEE
T ss_pred             HHHHHHHHHhcCCeEEEEEEec---cHHHHHhhhhhccccceEEeccCCCCccccc------ccCcHHHHHHhcCCCCEE
Confidence            33332111 1346776666655   7899999999999999999999876543332      567889999999999997


Q ss_pred             EE
Q 044944          580 VL  581 (759)
Q Consensus       580 Il  581 (759)
                      |+
T Consensus       154 vV  155 (160)
T d1mjha_         154 VV  155 (160)
T ss_dssp             EE
T ss_pred             EE
Confidence            75
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure