Citrus Sinensis ID: 044993

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710---
RDEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALKQKSK
cccccccEEEEEccccEEEEEEccHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccEEEEccccccccccccEEEEEEEccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccccEEEEEccccccEEEEEEEEccccEEEEEEcccccccccccEEEHHcccccccccccccccccccccccccccEEEEccccccHHHHcccEEEEEEccccccccccccccEEEEcHHHHHHHHHHHHcccccEEEEEccEEEEccccccEEEcccccccccccccccccccccccccEEEEccccccccccccccccccEEEEcccccccHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHcccccHHHEEEEEcccccccccccccccccccccEEcccccccEEEEEEEEEcccccEEEEEEEccccEEEEEEccEEEEEEcccEEEEEEEEEEEEcccccccccEEEEEEEEEccccEEEEEEEEEEEcc
ccccccHEEEEEcccEccEEEEccHHHHHHHHHcccEEEEcccccEEEcccccHHHccccccccccccccccHccccccEEEEEEcccccccccccccccccccccccccEEccccccccHHHHHHHHHHHHHccHHHHcccccccccccccccccccccccccccHHcccccccccccEEccccccccccccccEEEEEEEEEccccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHcccEEEEEccccccccccEcccccEEEEEEccccccccccEEEEccccEEEEEEEccccccccEEEEEccccccccccccHHHcccccccHHHcccEEEEEEcccccHHHHHcccEEEEEEcccccccccccccEEEEcHHHHHHHHHHHHcccccEEEEEcccEEEccccccEEEEEcccccccccHHHccccccccccEEEEEcccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccccccccccccccHHHcccccEEEEccHHHHHHHHHHccccHHHHHHHHccccccccccccccccccccEEEEEcccccEEEEEEEEEcccccEEEEEEEccccEEEEEEccEEEEEEccEEEEEEEEEEEEccccccccccEEEEEEEEEcccEEEEcEEEEEEEcc
RDEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFlnkptkklttgawnflglekdnvipsnstwekarfgedviiggidsgicpesesfsdeemgpipskwrgtcqnddhygvecnRKLIGIRHYNKGLIsaatkrnpafdippklktgrdldghgtHTLSAAAGNFVQYVGAFCnhrygtakggsprarvASYKVCwyseddhnaahgndcmeqdTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVaasgnggpepqtinnmapwmltvgASTMDREFAGYitlgnnkrlrgaslsvdmprksyplisgedarmanatdkdasckpgtldrkkVQGRILVCLHEEKGYEAAKKGAVAMITGasgtfsasygflpvtklKIKDFEAVLDYIKSTKDAKAFMTDAqtefaiepspavasfssrgpnridpsiikpdviapgVNIVAAYtsergptgyardnrrfaftamdgtsmstPIVAGIAGLIktvhpdwspaaIKSAIMTTAratdannkpisefngkeatafaygsghvdpnsaldpglvydltLDDYLGYLcnrgykedVVKKFvvdpakhpcpksfelanfnypsiaipelagsvtvtrklknvgtpgtykaqvkeipgistdvepssltfthvneektFKITFTLAQnakpnatndyvfgeliwsdgthrvrspialkqksk
RDEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISaatkrnpafdippKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYgtakggspraRVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYItlgnnkrlrgaslsvdmprKSYPlisgedarmanatdkdasckpgtldrkkvqGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRidpsiikpdviapGVNIVAAytsergptgyarDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARatdannkpisefNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLknvgtpgtykaqvkeipgistdvepSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIwsdgthrvrspialkqksk
RDEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGlvydltlddylgylCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALKQKSK
*****************GF***********LANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGIC****************KWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIP**L**GRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASG*******TINNMAPWMLTVGASTMDREFAGYITLGNNKRL******************************************KVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDA*************************SIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTA*****************ATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHR************
****REL*SSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKD*************FGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRN*********KTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALKQKS*
********SSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPE*********GPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTA********VASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALKQKSK
****RELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAAT**********************THTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALKQKS*
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RDEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALKQKSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query713 2.2.26 [Sep-21-2011]
O65351757 Subtilisin-like protease no no 0.932 0.878 0.408 1e-141
O64495775 Subtilisin-like protease no no 0.953 0.877 0.374 1e-124
Q39547731 Cucumisin OS=Cucumis melo N/A no 0.914 0.891 0.381 1e-122
Q9LLL8749 Xylem serine proteinase 1 no no 0.928 0.883 0.390 1e-120
P29141806 Minor extracellular prote yes no 0.446 0.394 0.293 3e-21
O31788442 Serine protease AprX OS=B no no 0.112 0.180 0.439 7e-10
P41363361 Thermostable alkaline pro no no 0.106 0.210 0.329 2e-05
P00782382 Subtilisin BPN' OS=Bacill no no 0.133 0.248 0.3 4e-05
Q99405380 M-protease OS=Bacillus cl no no 0.107 0.202 0.307 6e-05
P0DD35 1169 C5a peptidase OS=Streptoc yes no 0.556 0.339 0.242 6e-05
>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1 Back     alignment and function desciption
 Score =  503 bits (1294), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 294/720 (40%), Positives = 422/720 (58%), Gaps = 55/720 (7%)

Query: 11  SYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEKD--NVIPSN 68
           +Y   I+GF+  L +E A  L   P V+SV      +  TT    FLGL++   ++ P  
Sbjct: 68  TYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHTADLFPEA 127

Query: 69  STWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVE-CNRKLI 127
            ++       DV++G +D+G+ PES+S+SDE  GPIPS W+G C+   ++    CNRKLI
Sbjct: 128 GSYS------DVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLI 181

Query: 128 GIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYG 187
           G R + +G  S         D   + ++ RD DGHGTHT S AAG+ V+   +   +  G
Sbjct: 182 GARFFARGYESTMGP----IDESKESRSPRDDDGHGTHTSSTAAGSVVEGA-SLLGYASG 236

Query: 188 TAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDN 247
           TA+G +PRARVA YKVCW             C   D + A D AI D V+++++SLG   
Sbjct: 237 TARGMAPRARVAVYKVCWL----------GGCFSSDILAAIDKAIADNVNVLSMSLG-GG 285

Query: 248 IADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYI 307
           ++D+  DGV IGAF A   G+L   ++GN GP   +++N+APW+ TVGA T+DR+F    
Sbjct: 286 MSDYYRDGVAIGAFAAMERGILVSCSAGNAGPSSSSLSNVAPWITTVGAGTLDRDFPALA 345

Query: 308 TLGNNKRLRGASL--SVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILV 365
            LGN K   G SL     +P K  P I   +A  +NAT+ +  C  GTL  +KV+G+I++
Sbjct: 346 ILGNGKNFTGVSLFKGEALPDKLLPFIYAGNA--SNATNGNL-CMTGTLIPEKVKGKIVM 402

Query: 366 C-----LHEEKGYEAAKKGAVAMI---TGASGT-FSASYGFLPVTKLKIKDFEAVLDYIK 416
           C        +KG      G V MI   T A+G    A    LP T +  K  + +  Y+ 
Sbjct: 403 CDRGINARVQKGDVVKAAGGVGMILANTAANGEELVADAHLLPATTVGEKAGDIIRHYVT 462

Query: 417 STKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERG 476
           +  +  A ++   T   ++PSP VA+FSSRGPN I P+I+KPD+IAPGVNI+AA+T   G
Sbjct: 463 TDPNPTASISILGTVVGVKPSPVVAAFSSRGPNSITPNILKPDLIAPGVNILAAWTGAAG 522

Query: 477 PTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANN 536
           PTG A D+RR  F  + GTSMS P V+G+A L+K+VHP+WSPAAI+SA+MTTA  T  + 
Sbjct: 523 PTGLASDSRRVEFNIISGTSMSCPHVSGLAALLKSVHPEWSPAAIRSALMTTAYKTYKDG 582

Query: 537 KPISEF-NGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKK--- 592
           KP+ +   GK +T F +G+GHV P +A +PGL+YDLT +DYLG+LC   Y    ++    
Sbjct: 583 KPLLDIATGKPSTPFDHGAGHVSPTTATNPGLIYDLTTEDYLGFLCALNYTSPQIRSVSR 642

Query: 593 --FVVDPAKHPCPKSFELANFNYPSIAI-PELAGSVTVTRKLKNVGTPGTYKAQV-KEIP 648
             +  DP+     KS+ +A+ NYPS A+  +  G+   TR + +VG  GTY  +V  E  
Sbjct: 643 RNYTCDPS-----KSYSVADLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSVKVTSETT 697

Query: 649 GISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIAL 708
           G+   VEP+ L F   NE+K++ +TFT+  ++KP+ +N   FG + WSDG H V SP+A+
Sbjct: 698 GVKISVEPAVLNFKEANEKKSYTVTFTV-DSSKPSGSNS--FGSIEWSDGKHVVGSPVAI 754
Serine protease. Has a substrate preference for the hydrophobic residues Phe and Ala and the basic residue Asp in the P1 position, and for Asp, Leu or Ala in the P1' position.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: -
>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 Back     alignment and function description
>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1 Back     alignment and function description
>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1 Back     alignment and function description
>sp|P29141|SUBV_BACSU Minor extracellular protease vpr OS=Bacillus subtilis (strain 168) GN=vpr PE=1 SV=1 Back     alignment and function description
>sp|O31788|APRX_BACSU Serine protease AprX OS=Bacillus subtilis (strain 168) GN=aprX PE=1 SV=1 Back     alignment and function description
>sp|P41363|ELYA_BACHD Thermostable alkaline protease OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH0855 PE=1 SV=2 Back     alignment and function description
>sp|P00782|SUBT_BACAM Subtilisin BPN' OS=Bacillus amyloliquefaciens GN=apr PE=1 SV=1 Back     alignment and function description
>sp|Q99405|PRTM_BACSK M-protease OS=Bacillus clausii (strain KSM-K16) GN=aprE PE=1 SV=2 Back     alignment and function description
>sp|P0DD35|C5AP_STRPQ C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=scpA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query713
224056865772 predicted protein [Populus trichocarpa] 0.969 0.895 0.531 0.0
224122316775 predicted protein [Populus trichocarpa] 0.969 0.891 0.531 0.0
225447456769 PREDICTED: subtilisin-like protease [Vit 0.967 0.897 0.529 0.0
225462068745 PREDICTED: subtilisin-like protease-like 0.966 0.924 0.523 0.0
224129258769 predicted protein [Populus trichocarpa] 0.966 0.895 0.512 0.0
296090005803 unnamed protein product [Vitis vinifera] 0.966 0.858 0.515 0.0
356510927773 PREDICTED: subtilisin-like protease-like 0.966 0.891 0.509 0.0
227053577771 subtilisin-like serine protease [Carica 0.966 0.893 0.505 0.0
255567212771 Xylem serine proteinase 1 precursor, put 0.967 0.894 0.520 0.0
357462409772 Subtilisin-like protease [Medicago trunc 0.963 0.889 0.497 0.0
>gi|224056865|ref|XP_002299062.1| predicted protein [Populus trichocarpa] gi|222846320|gb|EEE83867.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/723 (53%), Positives = 491/723 (67%), Gaps = 32/723 (4%)

Query: 1   RDEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLE 60
           +++A+E I  SY  +INGFAA LEEE A  LA HP+VVSVFLNK  K  TT +WNFLGLE
Sbjct: 68  KEKAKEKIFYSYTNNINGFAAVLEEEEASSLAKHPDVVSVFLNKGKKLHTTRSWNFLGLE 127

Query: 61  KDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGV 120
            D ++P  S W+KAR+GEDVIIG +D+G+ PES+SFSDE MGP+PSKWRG CQ+D+  GV
Sbjct: 128 ADGMVPPYSLWKKARYGEDVIIGNLDTGVWPESKSFSDEGMGPVPSKWRGICQHDNKDGV 187

Query: 121 ECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGA 180
            CNRKLIG R++NKG  + A   N +F      +T RD +GHGTHTLS AAGNFV   GA
Sbjct: 188 VCNRKLIGTRYFNKGYAAYAGHLNSSF------QTARDSEGHGTHTLSTAAGNFVP--GA 239

Query: 181 -FCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDII 239
               +  GTAKGGSP AR A+YKVCW   +       N+C + D + AFD AI DGVD++
Sbjct: 240 DVLGYGNGTAKGGSPHARAAAYKVCWPPING-----SNECFDADILAAFDVAISDGVDVL 294

Query: 240 TVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTM 299
           +VSLG D  A+F  D + IG+FHA   G+  VA++GN GP P T++N+APW++TVGASTM
Sbjct: 295 SVSLGGDP-AEFSDDAIAIGSFHAVAKGITVVASAGNSGPSPGTVSNVAPWLITVGASTM 353

Query: 300 DREFAGYITLGNNKRLRGASLSVD-MP-RKSYPLISGEDARMANATDKDAS-CKPGTLDR 356
           DR F  Y+ LGN K L+GASLS   +P  K YPLIS  DA+ A+ +++DA  CKPG LD 
Sbjct: 354 DRAFTIYVALGNRKHLKGASLSEKRLPAEKFYPLISAADAKAADQSEEDALLCKPGALDP 413

Query: 357 KKVQGRILVCLHEE-----KGYEAAKKGAVAMITG----ASGTFSASYGFLPVTKLKIKD 407
           KKV+G+ILVCL  E     KG++A   GAV MI      +     A    LP   +   D
Sbjct: 414 KKVKGKILVCLRGENGRVDKGHQALLAGAVGMILANDENSGNEIIADTHVLPAAHVNFTD 473

Query: 408 FEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNI 467
            EAV  Y+  TK+  AF+T+ +TE A +P+P +ASFSSRGPN I+ SI+KPD+ APGV++
Sbjct: 474 GEAVFSYLNFTKEPMAFLTNVRTELATKPAPFMASFSSRGPNIIEESILKPDITAPGVSV 533

Query: 468 VAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMT 527
           +AA+T   GP+    D RR  +    GTSMS P V+GI GL+KT+HP+WSPAAI+SAIMT
Sbjct: 534 IAAFTQAIGPSDAEYDKRRTPYNTQSGTSMSCPHVSGIVGLLKTLHPEWSPAAIRSAIMT 593

Query: 528 TARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKE 587
           TA   D N +PI +    +AT FA G+GHV PN A DPGL+YDLT++D+L +LCNRG  +
Sbjct: 594 TATTRDNNGEPIMDSTNTKATPFADGAGHVQPNHAADPGLIYDLTVNDFLNFLCNRGNTK 653

Query: 588 DVVKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEI 647
             +K F   P  + CPKSF LA+FNYPSI +  L  S+TVTR++KNVG+PGTY   ++  
Sbjct: 654 KNIKLFSDKP--YTCPKSFSLADFNYPSITVTNLNDSITVTRRVKNVGSPGTYNIHIRAP 711

Query: 648 PGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIA 707
           PG++  V PS L F  + EEK FK+TF LA  A      DYVFG L W DG H VRSP+ 
Sbjct: 712 PGVTVSVAPSILRFQKIGEEKMFKVTFKLAPKA---VLTDYVFGMLTWGDGKHFVRSPLV 768

Query: 708 LKQ 710
           ++ 
Sbjct: 769 VRH 771

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224122316|ref|XP_002330593.1| predicted protein [Populus trichocarpa] gi|222872151|gb|EEF09282.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447456|ref|XP_002266728.1| PREDICTED: subtilisin-like protease [Vitis vinifera] gi|296085071|emb|CBI28486.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225462068|ref|XP_002269877.1| PREDICTED: subtilisin-like protease-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224129258|ref|XP_002320540.1| predicted protein [Populus trichocarpa] gi|222861313|gb|EEE98855.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|296090005|emb|CBI39824.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356510927|ref|XP_003524185.1| PREDICTED: subtilisin-like protease-like [Glycine max] Back     alignment and taxonomy information
>gi|227053577|gb|ACP18876.1| subtilisin-like serine protease [Carica papaya] Back     alignment and taxonomy information
>gi|255567212|ref|XP_002524587.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] gi|223536140|gb|EEF37795.1| Xylem serine proteinase 1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357462409|ref|XP_003601486.1| Subtilisin-like protease [Medicago truncatula] gi|355490534|gb|AES71737.1| Subtilisin-like protease [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query713
TAIR|locus:2168057778 SBT5.4 "AT5G59810" [Arabidopsi 0.964 0.884 0.477 3.8e-172
TAIR|locus:2050215772 AIR3 "AT2G04160" [Arabidopsis 0.969 0.895 0.481 3.4e-171
UNIPROTKB|Q6H733799 P0026H03.20-1 "Putative subtil 0.969 0.864 0.438 2.5e-152
UNIPROTKB|Q8H4X8762 OJ1136_A10.113 "Putative subti 0.957 0.896 0.412 2.3e-142
TAIR|locus:2102807736 AT3G46850 "AT3G46850" [Arabido 0.750 0.726 0.418 1.8e-133
TAIR|locus:2171938791 AT5G45650 "AT5G45650" [Arabido 0.877 0.791 0.388 1.1e-129
TAIR|locus:2153296741 AT5G59100 "AT5G59100" [Arabido 0.739 0.711 0.408 1.6e-128
TAIR|locus:2158187757 ARA12 [Arabidopsis thaliana (t 0.948 0.892 0.400 3.3e-127
TAIR|locus:2153291736 SBT4.12 "AT5G59090" [Arabidops 0.732 0.709 0.421 8.1e-125
TAIR|locus:2102792738 AT3G46840 "AT3G46840" [Arabido 0.751 0.726 0.416 5.7e-124
TAIR|locus:2168057 SBT5.4 "AT5G59810" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1673 (594.0 bits), Expect = 3.8e-172, P = 3.8e-172
 Identities = 345/723 (47%), Positives = 452/723 (62%)

Query:     2 DEARELISSSYRRHINGFAADLEEEHAQQLANHPEVVSVFLNKPTKKLTTGAWNFLGLEK 61
             + A+E I  SY+RHINGFAA L+E  A ++A HP+VVSVF NK  K  TT +WNF+ L K
Sbjct:    79 ENAKEAIFYSYKRHINGFAAILDENEAAEIAKHPDVVSVFPNKGRKLHTTHSWNFMLLAK 138

Query:    62 DNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVE 121
             + V+  +S W KA +GED II  +D+G+ PES+SFSDE  G +P++W+G C  D    V 
Sbjct:   139 NGVVHKSSLWNKAGYGEDTIIANLDTGVWPESKSFSDEGYGAVPARWKGRCHKD----VP 194

Query:   122 CNRKLIGIRHYNKGLIS-AATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGA 180
             CNRKLIG R++NKG ++      N +++      T RD DGHG+HTLS AAGNFV     
Sbjct:   195 CNRKLIGARYFNKGYLAYTGLPSNASYE------TCRDHDGHGSHTLSTAAGNFVPGANV 248

Query:   181 FCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIIT 240
             F     GTA GGSP+ARVA+YKVCW   D      G +C + D + A + AI DGVD+++
Sbjct:   249 F-GIGNGTASGGSPKARVAAYKVCWPPVD------GAECFDADILAAIEAAIEDGVDVLS 301

Query:   241 VSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAPWMLTVGASTMD 300
              S+G D   D++SDG+ IG+FHA  NGV  V ++GN GP+  T++N+APW++TVGAS+MD
Sbjct:   302 ASVGGD-AGDYMSDGIAIGSFHAVKNGVTVVCSAGNSGPKSGTVSNVAPWVITVGASSMD 360

Query:   301 REFAGYITLGNNKRLRGASLSVDMPR-KSYPLISGEDARMANATDKDAS-CKPGTLDRKK 358
             REF  ++ L N +  +G SLS  +P  K Y LIS  DA +AN    DA  CK G+LD KK
Sbjct:   361 REFQAFVELKNGQSFKGTSLSKPLPEEKMYSLISAADANVANGNVTDALLCKKGSLDPKK 420

Query:   359 VQGRILVCLHEE-----KGYEAAKKGAVAMIT---GASGTFSASYGF-LPVTKLKIKDFE 409
             V+G+ILVCL  +     KG +AA  GA  M+     ASG    S    LP +++  KD E
Sbjct:   421 VKGKILVCLRGDNARVDKGMQAAAAGAAGMVLCNDKASGNEIISDAHVLPASQIDYKDGE 480

Query:   410 AVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVNIVA 469
              +  Y+ STKD K ++         +P+P +ASFSSRGPN I P I+KPD+ APGVNI+A
Sbjct:   481 TLFSYLSSTKDPKGYIKAPTATLNTKPAPFMASFSSRGPNTITPGILKPDITAPGVNIIA 540

Query:   470 AYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTTA 529
             A+T   GPT    DNRR  F    GTSMS P ++G+ GL+KT+HP WSPAAI+SAIMTT+
Sbjct:   541 AFTEATGPTDLDSDNRRTPFNTESGTSMSCPHISGVVGLLKTLHPHWSPAAIRSAIMTTS 600

Query:   530 RATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGXXXXXXXXXXXXXXCNRGYKEDV 589
             R  +   KP+ + + K+A  F+YGSGHV PN A  PG              C  GY   V
Sbjct:   601 RTRNNRRKPMVDESFKKANPFSYGSGHVQPNKAAHPGLVYDLTTGDYLDFLCAVGYNNTV 660

Query:   590 VKKFVVDPAKHPCPKSFELANFNYPSIAIPELAGSVTVTRKLKNVGTPGTYKAQVKEIPG 649
             V+ F  DP ++ C +   L +FNYPSI +P L GS+TVTRKLKNVG P TY A+ +E  G
Sbjct:   661 VQLFAEDP-QYTCRQGANLLDFNYPSITVPNLTGSITVTRKLKNVGPPATYNARFREPLG 719

Query:   650 ISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRVRSPIALK 709
             +   VEP  LTF    E K F++T        P   + YVFGEL W+D  H VRSPI ++
Sbjct:   720 VRVSVEPKQLTFNKTGEVKIFQMTL----RPLPVTPSGYVFGELTWTDSHHYVRSPIVVQ 775

Query:   710 QKS 712
               S
Sbjct:   776 LSS 778
GO:0004252 "serine-type endopeptidase activity" evidence=IEA;IBA
GO:0005618 "cell wall" evidence=IBA
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IBA
GO:0042802 "identical protein binding" evidence=IEA
GO:0043086 "negative regulation of catalytic activity" evidence=IEA
TAIR|locus:2050215 AIR3 "AT2G04160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6H733 P0026H03.20-1 "Putative subtilisin-like proteinase AIR3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
UNIPROTKB|Q8H4X8 OJ1136_A10.113 "Putative subtilisin-like serine protease AIR3" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2102807 AT3G46850 "AT3G46850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171938 AT5G45650 "AT5G45650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153296 AT5G59100 "AT5G59100" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2158187 ARA12 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2153291 SBT4.12 "AT5G59090" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102792 AT3G46840 "AT3G46840" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.210.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_I1276
hypothetical protein (772 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query713
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 2e-86
cd04852307 cd04852, Peptidases_S8_3, Peptidase S8 family doma 7e-29
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 8e-28
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 4e-20
cd02120126 cd02120, PA_subtilisin_like, PA_subtilisin_like: P 4e-18
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 2e-17
cd07474295 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptid 7e-17
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 6e-16
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 2e-15
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 2e-14
cd07478455 cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam 5e-14
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 2e-13
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 9e-13
cd00306241 cd00306, Peptidases_S8_S53, Peptidase domain in th 1e-12
TIGR03921350 TIGR03921, T7SS_mycosin, type VII secretion-associ 1e-12
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 4e-12
cd07493261 cd07493, Peptidases_S8_9, Peptidase S8 family doma 2e-11
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 3e-11
cd07489312 cd07489, Peptidases_S8_5, Peptidase S8 family doma 7e-11
cd04077255 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Pep 1e-10
cd07487264 cd07487, Peptidases_S8_1, Peptidase S8 family doma 8e-10
cd07497311 cd07497, Peptidases_S8_14, Peptidase S8 family dom 2e-09
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 4e-09
cd07496285 cd07496, Peptidases_S8_13, Peptidase S8 family dom 5e-09
COG1404508 COG1404, AprE, Subtilisin-like serine proteases [P 2e-08
cd07482294 cd07482, Peptidases_S8_Lantibiotic_specific_protea 4e-08
pfam0592276 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 9e-08
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 1e-07
cd07498242 cd07498, Peptidases_S8_15, Peptidase S8 family dom 2e-07
cd07483291 cd07483, Peptidases_S8_Subtilisin_Novo-like, Pepti 3e-07
pfam00082277 pfam00082, Peptidase_S8, Subtilase family 6e-07
cd07473259 cd07473, Peptidases_S8_Subtilisin_like, Peptidase 8e-07
cd07490254 cd07490, Peptidases_S8_6, Peptidase S8 family doma 2e-06
cd04847291 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidas 3e-06
cd05562275 cd05562, Peptidases_S53_like, Peptidase domain in 4e-06
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 2e-05
cd07479255 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 fa 9e-05
cd04842293 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 2e-04
cd07484260 cd07484, Peptidases_S8_Thermitase_like, Peptidase 2e-04
cd07475346 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 3e-04
cd07477229 cd07477, Peptidases_S8_Subtilisin_subset, Peptidas 4e-04
cd07497311 cd07497, Peptidases_S8_14, Peptidase S8 family dom 4e-04
cd07479255 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 fa 6e-04
cd07478455 cd07478, Peptidases_S8_CspA-like, Peptidase S8 fam 0.001
cd07481264 cd07481, Peptidases_S8_BacillopeptidaseF-like, Pep 0.001
cd04848267 cd04848, Peptidases_S8_Autotransporter_serine_prot 0.001
TIGR03895 602 TIGR03895, protease_PatA, cyanobactin maturation p 0.001
cd07493261 cd07493, Peptidases_S8_9, Peptidase S8 family doma 0.002
cd07480297 cd07480, Peptidases_S8_12, Peptidase S8 family dom 0.002
cd07476267 cd07476, Peptidases_S8_thiazoline_oxidase_subtilis 0.003
cd07482294 cd07482, Peptidases_S8_Lantibiotic_specific_protea 0.004
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
 Score =  274 bits (702), Expect = 2e-86
 Identities = 100/254 (39%), Positives = 133/254 (52%), Gaps = 20/254 (7%)

Query: 47  KKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPS 106
           +  TT + +FLGL         S    A  GE +IIG +D+GI PE  SF+D   GP P 
Sbjct: 2   QLHTTRSPDFLGLPGAW---GGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPH 58

Query: 107 KWRGTCQ-NDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTH 165
            W G C   +D     CN KLIG R+++ G  +        F+   + ++ RD DGHGTH
Sbjct: 59  TWPGDCVTGEDFNPFSCNNKLIGARYFSDGYDAY-----GGFNSDGEYRSPRDYDGHGTH 113

Query: 166 TLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTI 225
           T S AAGN V    +     +GTA G +PRAR+A YKVCW             C   D +
Sbjct: 114 TASTAAGNVV-VNASVGGFAFGTASGVAPRARIAVYKVCW---------PDGGCFGSDIL 163

Query: 226 EAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTIN 285
            A D AI DGVD+I+ S+G  +  D   D + I   HA   G+   A++GN GP   T+ 
Sbjct: 164 AAIDQAIADGVDVISYSIGGGS-PDPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTVP 222

Query: 286 NMAPWMLTVGASTM 299
           N+APW+ TV AST+
Sbjct: 223 NVAPWVTTVAASTL 236

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Length = 307
>gnl|CDD|173795 cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|239035 cd02120, PA_subtilisin_like, PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173800 cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|173787 cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families Back     alignment and domain information
>gnl|CDD|234398 TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173814 cd07489, Peptidases_S8_5, Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>gnl|CDD|173790 cd04077, Peptidases_S8_PCSK9_ProteinaseK_like, Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>gnl|CDD|173812 cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|173820 cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>gnl|CDD|224322 COG1404, AprE, Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>gnl|CDD|203351 pfam05922, Inhibitor_I9, Peptidase inhibitor I9 Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|173822 cd07498, Peptidases_S8_15, Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>gnl|CDD|173809 cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>gnl|CDD|215701 pfam00082, Peptidase_S8, Subtilase family Back     alignment and domain information
>gnl|CDD|173799 cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|173815 cd07490, Peptidases_S8_6, Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>gnl|CDD|173793 cd04847, Peptidases_S8_Subtilisin_like_2, Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>gnl|CDD|173798 cd05562, Peptidases_S53_like, Peptidase domain in the S53 family Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|173805 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>gnl|CDD|173791 cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>gnl|CDD|173810 cd07484, Peptidases_S8_Thermitase_like, Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>gnl|CDD|173801 cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>gnl|CDD|173803 cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>gnl|CDD|173821 cd07497, Peptidases_S8_14, Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>gnl|CDD|173805 cd07479, Peptidases_S8_SKI-1_like, Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>gnl|CDD|173804 cd07478, Peptidases_S8_CspA-like, Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>gnl|CDD|173807 cd07481, Peptidases_S8_BacillopeptidaseF-like, Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>gnl|CDD|173794 cd04848, Peptidases_S8_Autotransporter_serine_protease_like, Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>gnl|CDD|234383 TIGR03895, protease_PatA, cyanobactin maturation protease, PatA/PatG family Back     alignment and domain information
>gnl|CDD|173818 cd07493, Peptidases_S8_9, Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>gnl|CDD|173806 cd07480, Peptidases_S8_12, Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>gnl|CDD|173802 cd07476, Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease, Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>gnl|CDD|173808 cd07482, Peptidases_S8_Lantibiotic_specific_protease, Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 713
cd04852307 Peptidases_S8_3 Peptidase S8 family domain, unchar 100.0
PTZ00262639 subtilisin-like protease; Provisional 100.0
cd05562275 Peptidases_S53_like Peptidase domain in the S53 fa 100.0
cd07479255 Peptidases_S8_SKI-1_like Peptidase S8 family domai 100.0
cd07475346 Peptidases_S8_C5a_Peptidase Peptidase S8 family do 100.0
cd07478455 Peptidases_S8_CspA-like Peptidase S8 family domain 100.0
cd07497311 Peptidases_S8_14 Peptidase S8 family domain, uncha 100.0
cd07489312 Peptidases_S8_5 Peptidase S8 family domain, unchar 100.0
cd07476267 Peptidases_S8_thiazoline_oxidase_subtilisin-like_p 100.0
cd07474295 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam 100.0
cd07483291 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa 100.0
cd05561239 Peptidases_S8_4 Peptidase S8 family domain, unchar 100.0
cd07493261 Peptidases_S8_9 Peptidase S8 family domain, unchar 100.0
cd07481264 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 100.0
cd04857412 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptid 100.0
cd07487264 Peptidases_S8_1 Peptidase S8 family domain, unchar 100.0
cd07485273 Peptidases_S8_Fervidolysin_like Peptidase S8 famil 100.0
cd07484260 Peptidases_S8_Thermitase_like Peptidase S8 family 100.0
cd07490254 Peptidases_S8_6 Peptidase S8 family domain, unchar 100.0
cd04847291 Peptidases_S8_Subtilisin_like_2 Peptidase S8 famil 100.0
cd07496285 Peptidases_S8_13 Peptidase S8 family domain, uncha 100.0
cd04077255 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 100.0
cd07494298 Peptidases_S8_10 Peptidase S8 family domain, uncha 100.0
cd04842293 Peptidases_S8_Kp43_protease Peptidase S8 family do 100.0
cd07480297 Peptidases_S8_12 Peptidase S8 family domain, uncha 100.0
cd07498242 Peptidases_S8_15 Peptidase S8 family domain, uncha 100.0
cd04843277 Peptidases_S8_11 Peptidase S8 family domain, uncha 100.0
cd07477229 Peptidases_S8_Subtilisin_subset Peptidase S8 famil 100.0
cd07473259 Peptidases_S8_Subtilisin_like Peptidase S8 family 100.0
PF00082282 Peptidase_S8: Subtilase family This is family S8 i 100.0
cd07491247 Peptidases_S8_7 Peptidase S8 family domain, unchar 100.0
cd07492222 Peptidases_S8_8 Peptidase S8 family domain, unchar 100.0
cd04059297 Peptidases_S8_Protein_convertases_Kexins_Furin-lik 100.0
cd07482294 Peptidases_S8_Lantibiotic_specific_protease Peptid 100.0
cd04848267 Peptidases_S8_Autotransporter_serine_protease_like 100.0
KOG4266 1033 consensus Subtilisin kexin isozyme-1/site 1 protea 100.0
KOG1153501 consensus Subtilisin-related protease/Vacuolar pro 100.0
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 100.0
cd07488247 Peptidases_S8_2 Peptidase S8 family domain, unchar 100.0
cd00306241 Peptidases_S8_S53 Peptidase domain in the S8 and S 99.97
COG1404508 AprE Subtilisin-like serine proteases [Posttransla 99.91
KOG3526629 consensus Subtilisin-like proprotein convertase [P 99.76
cd04056361 Peptidases_S53 Peptidase domain in the S53 family. 99.72
cd02133143 PA_C5a_like PA_C5a_like: Protease-associated domai 98.96
cd02120126 PA_subtilisin_like PA_subtilisin_like: Protease-as 98.9
KOG3525431 consensus Subtilisin-like proprotein convertase [P 98.47
PF06280112 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR0 98.41
COG4934 1174 Predicted protease [Posttranslational modification 98.32
cd04816122 PA_SaNapH_like PA_SaNapH_like: Protease-associated 98.22
PF0592282 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IP 98.11
cd04818118 PA_subtilisin_1 PA_subtilisin_1: Protease-associat 97.99
cd02130122 PA_ScAPY_like PA_ScAPY_like: Protease-associated d 97.96
PF02225101 PA: PA domain; InterPro: IPR003137 The PA (Proteas 97.93
cd02129120 PA_hSPPL_like PA_hSPPL_like: Protease-associated d 97.92
cd02122138 PA_GRAIL_like PA _GRAIL_like: Protease-associated 97.89
cd02127118 PA_hPAP21_like PA_hPAP21_like: Protease-associated 97.89
cd02132139 PA_GO-like PA_GO-like: Protease-associated domain 97.83
cd00538126 PA PA: Protease-associated (PA) domain. The PA dom 97.8
cd02126126 PA_EDEM3_like PA_EDEM3_like: protease associated d 97.72
cd02124129 PA_PoS1_like PA_PoS1_like: Protease-associated (PA 97.71
cd02125127 PA_VSR PA_VSR: Protease-associated (PA) domain-con 97.59
cd04819127 PA_2 PA_2: Protease-associated (PA) domain subgrou 97.49
cd02123153 PA_C_RZF_like PA_C-RZF_ like: Protease-associated 97.43
cd04813117 PA_1 PA_1: Protease-associated (PA) domain subgrou 97.4
cd04817139 PA_VapT_like PA_VapT_like: Protease-associated dom 97.37
PF14874102 PapD-like: Flagellar-associated PapD-like 95.72
cd04815134 PA_M28_2 PA_M28_2: Protease-associated (PA) domain 95.66
cd02128183 PA_TfR PA_TfR: Protease-associated domain containi 94.75
PF1063378 NPCBM_assoc: NPCBM-associated, NEW3 domain of alph 94.12
cd04822151 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) do 92.57
cd04820137 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) do 92.46
cd04814142 PA_M28_1 PA_M28_1: Protease-associated (PA) domain 91.64
PF11614118 FixG_C: IG-like fold at C-terminal of FixG, putati 91.45
cd02131153 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-asso 89.35
KOG2442541 consensus Uncharacterized conserved protein, conta 87.84
cd02121220 PA_GCPII_like PA_GCPII_like: Protease-associated d 87.76
PF06030121 DUF916: Bacterial protein of unknown function (DUF 87.65
KOG1114 1304 consensus Tripeptidyl peptidase II [Posttranslatio 82.07
>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3 Back     alignment and domain information 
Probab=100.00  E-value=3.1e-52  Score=442.94  Aligned_cols=306  Identities=46%  Similarity=0.760  Sum_probs=254.8

Q ss_pred             cccCCCCCccccCCCcCCCCCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCc-ccccc
Q 044993           46 TKKLTTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYG-VECNR  124 (713)
Q Consensus        46 ~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~-~~~n~  124 (713)
                      ++|+++++++|+++...-   ...+|..+++|+||+|||||||||++||+|++.+..+++..|++.|..+..+. ..||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~G~gv~VaViDtGid~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (307)
T cd04852           1 YQLHTTRSPDFLGLPGAW---GGSLLGAANAGEGIIIGVLDTGIWPEHPSFADVGGGPYPHTWPGDCVTGEDFNPFSCNN   77 (307)
T ss_pred             CCccccCCHHHcCCCCCC---CcccccccCCCCccEEEEEeCCCCCCCcCcccCCCCCCCCCCCCcccCCCCcCccCcCC
Confidence            578899999999988431   11246679999999999999999999999999988999999999999888876 67999


Q ss_pred             cceeeeecccchhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeee
Q 044993          125 KLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVC  204 (713)
Q Consensus       125 ki~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~  204 (713)
                      |+++.++|.+++....  +   ...+.+..++.|..||||||||||||+...+....| ...+.+.||||+|+|+.+|++
T Consensus        78 ki~g~~~~~~~~~~~~--~---~~~~~~~~~~~d~~gHGT~VAgiiag~~~~~~~~~~-~~~~~~~GvAP~a~l~~~kv~  151 (307)
T cd04852          78 KLIGARYFSDGYDAYG--G---FNSDGEYRSPRDYDGHGTHTASTAAGNVVVNASVGG-FAFGTASGVAPRARIAVYKVC  151 (307)
T ss_pred             eEEEEEEcccchhhcc--C---cccccCCCCCccCCCCchhhhhhhcCCCcccccccc-cccccEEEECCCCeEEEEEEe
Confidence            9999999987654331  0   012334567788999999999999998765544444 555678999999999999999


Q ss_pred             cCCCCccCCCCCCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCc
Q 044993          205 WYSEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTI  284 (713)
Q Consensus       205 ~~~~~~~~~~~gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~  284 (713)
                      +..         +.+..+++++||++|++++++|||||||.... ....+.+..++..+.++|++||+||||+|+...+.
T Consensus       152 ~~~---------~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~-~~~~~~~~~~~~~a~~~gilvV~aAGN~g~~~~~~  221 (307)
T cd04852         152 WPD---------GGCFGSDILAAIDQAIADGVDVISYSIGGGSP-DPYEDPIAIAFLHAVEAGIFVAASAGNSGPGASTV  221 (307)
T ss_pred             cCC---------CCccHHHHHHHHHHHHHcCCCEEEeCCCCCCC-CcccCHHHHHHHHHHhCCCEEEEECCCCCCCCCcc
Confidence            874         26889999999999999999999999999832 45667888888999999999999999999887788


Q ss_pred             cCCCCccEEeccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEE
Q 044993          285 NNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRIL  364 (713)
Q Consensus       285 ~~~ap~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv  364 (713)
                      .+..||+++|||++                                                                  
T Consensus       222 ~~~~~~vi~Vga~~------------------------------------------------------------------  235 (307)
T cd04852         222 PNVAPWVTTVAAST------------------------------------------------------------------  235 (307)
T ss_pred             cCCCCCeEEEEecc------------------------------------------------------------------
Confidence            88899999999620                                                                  


Q ss_pred             EEEechhhHHHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCcccccc
Q 044993          365 VCLHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFS  444 (713)
Q Consensus       365 l~~~~~k~~~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fS  444 (713)
                                                                                                      
T Consensus       236 --------------------------------------------------------------------------------  235 (307)
T cd04852         236 --------------------------------------------------------------------------------  235 (307)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHH
Q 044993          445 SRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSA  524 (713)
Q Consensus       445 S~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~  524 (713)
                                 +||||+|||.+|++++....   ..........|..++|||||||+|||++|||+|++|+|+|.|||++
T Consensus       236 -----------~~~di~apG~~i~~~~~~~~---~~~~~~~~~~~~~~sGTS~AaP~vaG~aALl~~~~p~~t~~~v~~~  301 (307)
T cd04852         236 -----------LKPDIAAPGVDILAAWTPEG---ADPGDARGEDFAFISGTSMASPHVAGVAALLKSAHPDWSPAAIKSA  301 (307)
T ss_pred             -----------CccceeeccCceeecccCcc---ccccCCCCCcEEEeCcHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Confidence                       47899999999999987531   1112233458999999999999999999999999999999999999


Q ss_pred             HHhccc
Q 044993          525 IMTTAR  530 (713)
Q Consensus       525 L~~TA~  530 (713)
                      |++||+
T Consensus       302 L~~tA~  307 (307)
T cd04852         302 LMTTAY  307 (307)
T ss_pred             HHHhcC
Confidence            999984

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.
>PTZ00262 subtilisin-like protease; Provisional Back     alignment and domain information
>cd05562 Peptidases_S53_like Peptidase domain in the S53 family Back     alignment and domain information
>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins Back     alignment and domain information
>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases Back     alignment and domain information
>cd07478 Peptidases_S8_CspA-like Peptidase S8 family domain in CspA-like proteins Back     alignment and domain information
>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14 Back     alignment and domain information
>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5 Back     alignment and domain information
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases Back     alignment and domain information
>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins Back     alignment and domain information
>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins Back     alignment and domain information
>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4 Back     alignment and domain information
>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9 Back     alignment and domain information
>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins Back     alignment and domain information
>cd04857 Peptidases_S8_Tripeptidyl_Aminopeptidase_II Peptidase S8 family domain in Tripeptidyl aminopeptidases_II Back     alignment and domain information
>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1 Back     alignment and domain information
>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin Back     alignment and domain information
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins Back     alignment and domain information
>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6 Back     alignment and domain information
>cd04847 Peptidases_S8_Subtilisin_like_2 Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13 Back     alignment and domain information
>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins Back     alignment and domain information
>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10 Back     alignment and domain information
>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases Back     alignment and domain information
>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12 Back     alignment and domain information
>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15 Back     alignment and domain information
>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11 Back     alignment and domain information
>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins Back     alignment and domain information
>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins Back     alignment and domain information
>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification Back     alignment and domain information
>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7 Back     alignment and domain information
>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8 Back     alignment and domain information
>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases Back     alignment and domain information
>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases Back     alignment and domain information
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases Back     alignment and domain information
>KOG4266 consensus Subtilisin kexin isozyme-1/site 1 protease, subtilase superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1153 consensus Subtilisin-related protease/Vacuolar protease B [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd07488 Peptidases_S8_2 Peptidase S8 family domain, uncharacterized subfamily 2 Back     alignment and domain information
>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families Back     alignment and domain information
>COG1404 AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3526 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04056 Peptidases_S53 Peptidase domain in the S53 family Back     alignment and domain information
>cd02133 PA_C5a_like PA_C5a_like: Protease-associated domain containing proteins like Streptococcus pyogenes C5a peptidase Back     alignment and domain information
>cd02120 PA_subtilisin_like PA_subtilisin_like: Protease-associated domain containing subtilisin-like proteases Back     alignment and domain information
>KOG3525 consensus Subtilisin-like proprotein convertase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06280 DUF1034: Fn3-like domain (DUF1034); InterPro: IPR010435 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4934 Predicted protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04816 PA_SaNapH_like PA_SaNapH_like: Protease-associated domain containing proteins like Streptomyces anulatus N-acetylpuromycin N-acetylhydrolase (SaNapH) Back     alignment and domain information
>PF05922 Inhibitor_I9: Peptidase inhibitor I9; InterPro: IPR010259 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>cd04818 PA_subtilisin_1 PA_subtilisin_1: Protease-associated domain containing subtilisin-like proteases, subgroup 1 Back     alignment and domain information
>cd02130 PA_ScAPY_like PA_ScAPY_like: Protease-associated domain containing proteins like Saccharomyces cerevisiae aminopeptidase Y (ScAPY) Back     alignment and domain information
>PF02225 PA: PA domain; InterPro: IPR003137 The PA (Protease associated) domain is found as an insert domain in diverse proteases, which include the MEROPS peptidase families A22B, M28, and S8A [] Back     alignment and domain information
>cd02129 PA_hSPPL_like PA_hSPPL_like: Protease-associated domain containing human signal peptide peptidase-like (hSPPL)-like Back     alignment and domain information
>cd02122 PA_GRAIL_like PA _GRAIL_like: Protease-associated (PA) domain GRAIL-like Back     alignment and domain information
>cd02127 PA_hPAP21_like PA_hPAP21_like: Protease-associated domain containing proteins like the human secreted glycoprotein hPAP21 (human protease-associated domain-containing protein, 21kDa) Back     alignment and domain information
>cd02132 PA_GO-like PA_GO-like: Protease-associated domain containing proteins like Arabidopsis thaliana growth-on protein GRO10 Back     alignment and domain information
>cd00538 PA PA: Protease-associated (PA) domain Back     alignment and domain information
>cd02126 PA_EDEM3_like PA_EDEM3_like: protease associated domain (PA) domain-containing EDEM3-like proteins Back     alignment and domain information
>cd02124 PA_PoS1_like PA_PoS1_like: Protease-associated (PA) domain PoS1-like Back     alignment and domain information
>cd02125 PA_VSR PA_VSR: Protease-associated (PA) domain-containing plant vacuolar sorting receptor (VSR) Back     alignment and domain information
>cd04819 PA_2 PA_2: Protease-associated (PA) domain subgroup 2 Back     alignment and domain information
>cd02123 PA_C_RZF_like PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like Back     alignment and domain information
>cd04813 PA_1 PA_1: Protease-associated (PA) domain subgroup 1 Back     alignment and domain information
>cd04817 PA_VapT_like PA_VapT_like: Protease-associated domain containing proteins like VapT from Vibrio metschnikovii strain RH530 Back     alignment and domain information
>PF14874 PapD-like: Flagellar-associated PapD-like Back     alignment and domain information
>cd04815 PA_M28_2 PA_M28_2: Protease-associated (PA) domain, peptidase family M28, subfamily-2 Back     alignment and domain information
>cd02128 PA_TfR PA_TfR: Protease-associated domain containing proteins like transferrin receptor (TfR) Back     alignment and domain information
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known Back     alignment and domain information
>cd04822 PA_M28_1_3 PA_M28_1_3: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 3 Back     alignment and domain information
>cd04820 PA_M28_1_1 PA_M28_1_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1, subgroup 1 Back     alignment and domain information
>cd04814 PA_M28_1 PA_M28_1: Protease-associated (PA) domain, peptidase family M28, subfamily-1 Back     alignment and domain information
>PF11614 FixG_C: IG-like fold at C-terminal of FixG, putative oxidoreductase; PDB: 2R39_A Back     alignment and domain information
>cd02131 PA_hNAALADL2_like PA_hNAALADL2_like: Protease-associated domain containing proteins like human N-acetylated alpha-linked acidic dipeptidase-like 2 protein (hNAALADL2) Back     alignment and domain information
>KOG2442 consensus Uncharacterized conserved protein, contains PA domain [General function prediction only] Back     alignment and domain information
>cd02121 PA_GCPII_like PA_GCPII_like: Protease-associated domain containing protein, glutamate carboxypeptidase II (GCPII)-like Back     alignment and domain information
>PF06030 DUF916: Bacterial protein of unknown function (DUF916); InterPro: IPR010317 This family consists of putative cell surface proteins, from Firmicutes, of unknown function Back     alignment and domain information
>KOG1114 consensus Tripeptidyl peptidase II [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query713
3vta_A621 Crystal Structure Of Cucumisin, A Subtilisin-Like E 1e-107
3i6s_A649 Crystal Structure Of The Plant Subtilisin-Like Prot 6e-94
3afg_A539 Crystal Structure Of Pron-Tk-Sp From Thermococcus K 2e-11
1wmd_A434 Crystal Structure Of Alkaline Serine Protease Kp-43 3e-06
2sni_E275 Structural Comparison Of Two Serine Proteinase-Prot 3e-06
2sbt_A275 A Comparison Of The Three-Dimensional Structures Of 3e-06
1wsd_A269 Alkaline M-Protease Form I Crystal Strcuture Length 5e-06
1dui_A266 Subtilisin Bpn' From Bacillus Amyloliquefaciens, Cr 5e-06
1spb_S266 Subtilisin Bpn' Prosegment (77 Residues) Complexed 5e-06
1sua_A266 Subtilisin Bpn' Length = 266 5e-06
1c9j_A269 Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A 6e-06
2sic_E275 Refined Crystal Structure Of The Complex Of Subtili 6e-06
1s02_A275 Effects Of Engineered Salt Bridges On The Stability 6e-06
1lw6_E281 Crystal Structure Of The Complex Of Subtilisin Bpn' 7e-06
1sue_A266 Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mu 7e-06
1aqn_A275 Subtilisin Mutant 8324 Length = 275 7e-06
1ah2_A269 Serine Protease Pb92 From Bacillus Alcalophilus, Nm 8e-06
1ndu_A269 Bacillus Lentus Subtilisin Variant S101gV104N Lengt 8e-06
1sbi_A275 Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, 8e-06
1ndq_A269 Bacillus Lentus Subtilisin Length = 269 8e-06
1st3_A269 The Crystal Structure Of The Bacillus Lentus Alkali 8e-06
1yjb_A275 Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant Wit 8e-06
3f49_S266 Anion-Triggered Engineered Subtilisin Subt_bacam Le 8e-06
1s01_A275 Large Increases In General Stability For Subtilisin 9e-06
1ak9_A275 Subtilisin Mutant 8321 Length = 275 1e-05
1c9n_A269 Bacillus Lentus Substilisin Variant (Ser 87) K27rV1 2e-05
1ubn_A275 Selenosubtilisin Bpn Length = 275 2e-05
1v5i_A275 Crystal Structure Of Serine Protease Inhibitor Poia 2e-05
3cnq_S266 Prosubtilisin Substrate Complex Of Subtilisin Subt_ 2e-05
1gnv_A266 Calcium Independent Subtilisin Bpn' Mutant Length = 2e-05
1iav_A269 Structure On Native (Asn 87) Subtilisin From Bacill 2e-05
1q5p_A269 S156e/s166d Variant Of Bacillus Lentus Subtilisin L 2e-05
3eif_A 936 1.9 Angstrom Crystal Structure Of The Active Form O 3e-05
1c9m_A269 Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I L 3e-05
1a2q_A275 Subtilisin Bpn' Mutant 7186 Length = 275 3e-05
1sub_A275 Calcium-Independent Subtilisin By Design Length = 2 3e-05
1suc_A275 Calcium-Independent Subtilisin By Design Length = 2 4e-05
1st2_A275 The Three-Dimensional Structure Of Bacillus Amyloli 4e-05
1gns_A263 Subtilisin Bpn' Length = 263 5e-05
1wmf_A434 Crystal Structure Of Alkaline Serine Protease Kp-43 1e-04
4dzt_A276 Aqualysin I: The Crystal Structure Of A Serine Prot 1e-04
1mee_A275 The Complex Between The Subtilisin From A Mesophili 1e-04
1scj_A275 Crystal Structure Of Subtilisin-Propeptide Complex 2e-04
4dww_A275 Crystal Structure Of Nattokinase From Bacillus Subt 3e-04
1bh6_A274 Subtilisin Dy In Complex With The Synthetic Inhibit 5e-04
3lpa_A340 Crystal Structure Of A Subtilisin-Like Protease Len 5e-04
3lpc_A340 Crystal Structure Of A Subtilisin-Like Protease Len 5e-04
3lpd_A339 Crystal Structure Of A Subtilisin-Like Protease Len 5e-04
1xf1_A 926 Structure Of C5a Peptidase- A Key Virulence Factor 7e-04
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like Endoprotease From Cucumis Melo L Length = 621 Back     alignment and structure 
Iteration: 1

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 246/670 (36%), Positives = 351/670 (52%), Gaps = 64/670 (9%)
Query: 50  TTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWR 109
           TT +W+FLG      +P  S  E      ++++G +D+GI PES SF DE   P P KW+
Sbjct: 1   TTRSWDFLGFPL--TVPRRSQVE-----SNIVVGVLDTGIWPESPSFDDEGFSPPPPKWK 53
Query: 110 GTCQNDDHYGVECNRKLIGIRHYNKGL-ISAATKRNPAFDIPPKLKTGRDLDGHGTHTLS 168
           GTC+  +++   CNRK+IG R Y+ G  IS      P           RD +GHGTHT S
Sbjct: 54  GTCETSNNF--RCNRKIIGARSYHIGRPISPGDVNGP-----------RDTNGHGTHTAS 100
Query: 169 AAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGND-CMEQDTIEA 227
            AAG  V     +     GTA+GG P AR+A+YKVCW           ND C + D + A
Sbjct: 101 TAAGGLVSQANLY-GLGLGTARGGVPLARIAAYKVCW-----------NDGCSDTDILAA 148
Query: 228 FDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNM 287
           +DDAI DGVDII++S+G  N   +  D + IG+FHA   G+LT  ++GNGGP   T  ++
Sbjct: 149 YDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASL 208
Query: 288 APWMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDA 347
           +PW+L+V ASTMDR+F   + +GN +  +G S++     + YPL+SG D       DK  
Sbjct: 209 SPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINT-FDNQYYPLVSGRDIP-NTGFDKST 266
Query: 348 S--CKPGTLDRKKVQGRILVC---LHEEKGYEAAKKGAVAMITGASGTFSASYGFLPVTK 402
           S  C   +++   ++G+I+VC       + +++    A  ++T  +  ++ SY  LP + 
Sbjct: 267 SRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSYP-LPSSV 325
Query: 403 LKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIA 462
           L   D  A L YI S +   A +  + T      +P V SFSSRGPNR    +IKPD+  
Sbjct: 326 LDPNDLLATLRYIYSIRSPGATIFKSTTILNAS-APVVVSFSSRGPNRATKDVIKPDISG 384
Query: 463 PGVNIVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIK 522
           PGV I+AA+ S   P G  R  R   F  + GTSMS P + GIA  +KT +P WSPAAIK
Sbjct: 385 PGVEILAAWPSV-APVGGIR--RNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIK 441
Query: 523 SAIMTTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGXXXXXXXXXXXXXXCN 582
           SA+MTTA   +A   P +E        FAYGSGHV+P  A+ PG              C 
Sbjct: 442 SALMTTASPMNARFNPQAE--------FAYGSGHVNPLKAVRPGLVYDANESDYVKFLCG 493
Query: 583 RGYKEDVVKKFVVDPAKHPCPKSFELANFNYPSIAI---PELAGSVTVTRKLKNVG-TPG 638
           +GY    V++   D +      +  + + NYPS  +   P    +    R L +V     
Sbjct: 494 QGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQAS 553
Query: 639 TYKAQVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDG 698
           TY+A +    G++  V P+ L+F  + + K+F +T       + +     V   L+WSDG
Sbjct: 554 TYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLT------VRGSIKGFVVSASLVWSDG 607
Query: 699 THRVRSPIAL 708
            H VRSPI +
Sbjct: 608 VHYVRSPITI 617
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease Sbt3 Length = 649 Back     alignment and structure
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus Kodakaraensis Length = 539 Back     alignment and structure
>pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K) Length = 434 Back     alignment and structure
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And Ci-2- Subtilisin Novo Length = 275 Back     alignment and structure
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of Subtilisin Bpn And Subtilisin Novo Length = 275 Back     alignment and structure
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture Length = 269 Back     alignment and structure
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal Growth Mutant Length = 266 Back     alignment and structure
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6. Crystallization Temperature 20 C Diffraction Temperature- 160 C Length = 266 Back     alignment and structure
>pdb|1SUA|A Chain A, Subtilisin Bpn' Length = 266 Back     alignment and structure
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant Length = 269 Back     alignment and structure
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin Bpn' And Streptomyces Subtilisin Inhibitor At 1.8 Angstroms Resolution Length = 275 Back     alignment and structure
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of Subtilisin Bpn' Length = 275 Back     alignment and structure
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 281 Back     alignment and structure
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant Length = 266 Back     alignment and structure
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324 Length = 275 Back     alignment and structure
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18 Structures Length = 269 Back     alignment and structure
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N Length = 269 Back     alignment and structure
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d, G169a, Q206c, N218s) Length = 275 Back     alignment and structure
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin Length = 269 Back     alignment and structure
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline Protease, Subtilisin Bl, At 1.4 Angstroms Resolution Length = 269 Back     alignment and structure
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met 50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169 Replaced By Ala, Gln 206 Replaced By Cys, Asn 218 Replaced By Ser And Lys 256 Replaced By Tyr) (M50f, N76d, G169a, Q206c, N218s, And K256y) In 35% Dimethylformamide Length = 275 Back     alignment and structure
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam Length = 266 Back     alignment and structure
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin Bpn(Prime) Through Incremental Changes In The Free Energy Of Unfolding Length = 275 Back     alignment and structure
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321 Length = 275 Back     alignment and structure
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87) K27rV104YN123ST274A Length = 269 Back     alignment and structure
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn Length = 275 Back     alignment and structure
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In Complex With Subtilisin Bpn' Length = 275 Back     alignment and structure
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam Length = 266 Back     alignment and structure
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant Length = 266 Back     alignment and structure
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus Lentus Length = 269 Back     alignment and structure
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin Length = 269 Back     alignment and structure
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The C5a Peptidase From Streptococcus Pyogenes (Scpa) Length = 936 Back     alignment and structure
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I Length = 269 Back     alignment and structure
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186 Length = 275 Back     alignment and structure
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 Back     alignment and structure
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design Length = 275 Back     alignment and structure
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus Amyloliquefaciens Subtilisin At 1.8 Angstroms And An Analysis Of The Structural Consequences Of Peroxide Inactivation Length = 275 Back     alignment and structure
>pdb|1GNS|A Chain A, Subtilisin Bpn' Length = 263 Back     alignment and structure
>pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom) Length = 434 Back     alignment and structure
>pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease From An Extreme Thermophile, Thermus Aquaticus Yt-1 Length = 276 Back     alignment and structure
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic Bacterium And The Leech Inhibitor Eglin-C Length = 275 Back     alignment and structure
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex Length = 275 Back     alignment and structure
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis Natto Length = 275 Back     alignment and structure
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N- Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone Length = 274 Back     alignment and structure
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 340 Back     alignment and structure
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 340 Back     alignment and structure
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease Length = 339 Back     alignment and structure
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From Streptococcus Length = 926 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query713
3vta_A621 Cucumisin; subtilisin-like fold, serine protease, 0.0
3i6s_A649 Subtilisin-like protease; PA-domain, FN3-domain, h 0.0
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 1e-128
3afg_A539 Subtilisin-like serine protease; propeptide, therm 4e-25
3afg_A539 Subtilisin-like serine protease; propeptide, therm 2e-11
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 3e-22
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 4e-11
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 6e-22
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 5e-13
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 7e-22
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 1e-09
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 8e-22
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 2e-10
2ixt_A310 36KDA protease; serine protease, sphericase, subti 4e-21
2ixt_A310 36KDA protease; serine protease, sphericase, subti 2e-06
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 1e-19
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 2e-11
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 3e-19
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 2e-08
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 1e-18
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 1e-06
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 1e-18
4aks_A360 PATG, thiazoline oxidase/subtilisin-like protease; 3e-12
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 2e-18
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 8e-09
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 3e-18
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 1e-09
3t41_A471 Epidermin leader peptide processing serine protea; 1e-17
3t41_A471 Epidermin leader peptide processing serine protea; 3e-09
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 3e-17
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 5e-08
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 2e-16
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 2e-08
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 6e-16
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 4e-08
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 1e-14
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 8e-11
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 8e-14
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 1e-04
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 2e-13
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 2e-13
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 6e-04
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 5e-13
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 2e-04
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 1e-12
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 2e-04
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 2e-12
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 4e-07
3f7m_A279 Alkaline serine protease VER112; verticillium psal 8e-10
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 2e-09
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 4e-08
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 2e-05
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 3e-07
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 1e-05
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Length = 621 Back     alignment and structure
 Score =  604 bits (1559), Expect = 0.0
 Identities = 240/667 (35%), Positives = 346/667 (51%), Gaps = 56/667 (8%)

Query: 50  TTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWR 109
           TT +W+FLG          +   +++   ++++G +D+GI PES SF DE   P P KW+
Sbjct: 1   TTRSWDFLGFPL-------TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWK 53

Query: 110 GTCQNDDHYGVECNRKLIGIRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSA 169
           GTC+        CNRK+IG R Y+ G   +          P  +   RD +GHGTHT S 
Sbjct: 54  GTCET--SNNFRCNRKIIGARSYHIGRPIS----------PGDVNGPRDTNGHGTHTAST 101

Query: 170 AAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAAHGNDCMEQDTIEAFD 229
           AAG  V           GTA+GG P AR+A+YKVCW           + C + D + A+D
Sbjct: 102 AAGGLVSQA-NLYGLGLGTARGGVPLARIAAYKVCW----------NDGCSDTDILAAYD 150

Query: 230 DAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMAP 289
           DAI DGVDII++S+G  N   +  D + IG+FHA   G+LT  ++GNGGP   T  +++P
Sbjct: 151 DAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSP 210

Query: 290 WMLTVGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDAS- 348
           W+L+V ASTMDR+F   + +GN +  +G S++     + YPL+SG D          +  
Sbjct: 211 WLLSVAASTMDRKFVTQVQIGNGQSFQGVSINT-FDNQYYPLVSGRDIPNTGFDKSTSRF 269

Query: 349 CKPGTLDRKKVQGRILVCLHE--EKGYEAAKKGAVAMITGASGTFSASYGFLPVTKLKIK 406
           C   +++   ++G+I+VC        +  +  GA  ++  ++    A    LP + L   
Sbjct: 270 CTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRDYADSYPLPSSVLDPN 329

Query: 407 DFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDPSIIKPDVIAPGVN 466
           D  A L YI S +   A +  + T      +P V SFSSRGPNR    +IKPD+  PGV 
Sbjct: 330 DLLATLRYIYSIRSPGATIFKS-TTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVE 388

Query: 467 IVAAYTSERGPTGYARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIM 526
           I+AA+ S     G     R   F  + GTSMS P + GIA  +KT +P WSPAAIKSA+M
Sbjct: 389 ILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALM 445

Query: 527 TTARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYK 586
           TTA   +A   P +E        FAYGSGHV+P  A+ PGLVYD    DY+ +LC +GY 
Sbjct: 446 TTASPMNARFNPQAE--------FAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYN 497

Query: 587 EDVVKKFVVDPAKHPCPKSFELANFNYPSIAI---PELAGSVTVTRKLKNVGTP-GTYKA 642
              V++   D +      +  + + NYPS  +   P    +    R L +V     TY+A
Sbjct: 498 TQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRA 557

Query: 643 QVKEIPGISTDVEPSSLTFTHVNEEKTFKITFTLAQNAKPNATNDYVFGELIWSDGTHRV 702
            +    G++  V P+ L+F  + + K+F +T         +     V   L+WSDG H V
Sbjct: 558 MISAPQGLTISVNPNVLSFNGLGDRKSFTLTVR------GSIKGFVVSASLVWSDGVHYV 611

Query: 703 RSPIALK 709
           RSPI + 
Sbjct: 612 RSPITIT 618
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Length = 649 Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Length = 926 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Length = 539 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Length = 281 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Length = 1354 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Length = 269 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Length = 274 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Length = 310 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Length = 434 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Length = 671 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Length = 347 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>4aks_A PATG, thiazoline oxidase/subtilisin-like protease; hydrolase, patellamide; 2.19A {Prochloron didemni} PDB: 4akt_A Length = 360 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Length = 279 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Length = 280 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Length = 471 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Length = 327 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Length = 340 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Length = 320 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Length = 395 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Length = 278 Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Length = 441 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Length = 276 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Length = 546 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Length = 284 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Length = 692 Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A Length = 279 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Length = 279 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503 Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query713
3i6s_A649 Subtilisin-like protease; PA-domain, FN3-domain, h 100.0
3vta_A621 Cucumisin; subtilisin-like fold, serine protease, 100.0
1xf1_A 926 C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {St 100.0
3afg_A539 Subtilisin-like serine protease; propeptide, therm 100.0
2z2z_A395 TK-subtilisin precursor; thermococcus kodakaraensi 100.0
3t41_A471 Epidermin leader peptide processing serine protea; 100.0
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 100.0
1r6v_A671 Subtilisin-like serine protease; sandwich domain, 100.0
1r0r_E274 Subtilisin carlsberg; high resolution, serine prot 100.0
1gci_A269 Subtilisin; hydrolase, serine protease; 0.78A {Bac 100.0
1to2_E281 Subtilisin BPN'; serine protease, hydrolase; HET: 100.0
1dbi_A280 AK.1 serine protease; hydrolase; 1.80A {Bacillus S 100.0
2x8j_A327 Intracellular subtilisin protease; hydrolase, seri 100.0
1thm_A279 Thermitase; hydrolase(serine protease); 1.37A {The 100.0
4h6x_A357 Thiazoline oxidase/subtilisin-like protease; hydro 100.0
2p4e_P692 Proprotein convertase subtilisin/kexin type 9; pro 100.0
2ixt_A310 36KDA protease; serine protease, sphericase, subti 100.0
2z30_A320 TK-subtilisin; thermococcus kodakaraensis, hydrola 100.0
3zxy_A282 Subtilisin-like protein; hydrolase; 1.58A {Prochlo 100.0
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 100.0
4h6w_A306 N-terminal cyanobactin protease; hydrolase; 2.45A 100.0
1wmd_A434 Protease; alpha-beta hydrolase fold, jelly-roll be 100.0
2iy9_A347 SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col 100.0
3lpc_A340 APRB2; protease, subtilase, virulence factor, hydr 100.0
2oxa_A600 Extracellular serine protease; kexin, hydrolase; 1 100.0
1sh7_A284 Extracellular subtilisin-like serine proteinase; c 100.0
2b6n_A278 Proteinase K; S binding, substrate specificity, pr 100.0
4dzt_A276 Aqualysin-1, aqualysin-I; serine protease, calcium 100.0
1p8j_A471 Furin precursor; prohormone convertase, SPC1, PACE 100.0
2pwa_A279 Proteinase K; structure, alanine boronic acid, hyd 100.0
2id4_A503 Kexin; KEX2, kexin, furin, proprotein, prohormone, 100.0
3f7m_A279 Alkaline serine protease VER112; verticillium psal 100.0
3hjr_A600 Extracellular serine protease; kexin, hydrolase; 1 100.0
2qtw_B546 Proprotein convertase subtilisin/kexin type 9; cor 100.0
1t1e_A552 Kumamolisin; proenzyme, prosubtilase, activation m 99.9
1ga6_A372 Serine-carboxyl proteinase; serine-carboxyl protei 99.85
3edy_A544 Tripeptidyl-peptidase 1; protease, TPP1, sedolisin 98.88
3cnq_P80 Subtilisin BPN'; uncleaved, proenzyme, substrate c 98.18
2w2n_P114 Proprotein convertase subtilisin/kexin type 9; hyd 97.94
3icu_A194 E3 ubiquitin-protein ligase RNF128; E3 ligase, ene 97.64
2qtw_A124 Proprotein convertase subtilisin/kexin type 9 Pro; 97.61
1v5i_B76 POIA1, IA-1=serine proteinase inhibitor; protease- 97.28
2z30_B65 TK-subtilisin; thermococcus kodakaraensis, hydrola 96.67
2ys4_A122 Hydrocephalus-inducing protein homolog; hydin, PAP 94.88
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 92.66
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 90.34
3qbt_B140 Inositol polyphosphate 5-phosphatase OCRL-1; prote 89.84
3lxu_X 1354 Tripeptidyl-peptidase 2; spindle complex, aminopep 88.24
2e6j_A112 Hydin protein; PAPD, structural genomics, NPPSFA, 86.15
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 84.54
3kas_A 640 Transferrin receptor protein 1; transferrin recept 83.07
2r39_A118 FIXG-related protein; structural GE PSI-2, protein 82.33
1y9z_A441 Alkaline serine protease; subtilisin-like alpha/be 82.15
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A* Back     alignment and structure
Probab=100.00  E-value=8.3e-121  Score=1047.34  Aligned_cols=622  Identities=37%  Similarity=0.638  Sum_probs=559.5

Q ss_pred             CCCCccccCCCcCCCCCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCc-cccccccee
Q 044993           50 TTGAWNFLGLEKDNVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYG-VECNRKLIG  128 (713)
Q Consensus        50 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~-~~~n~ki~g  128 (713)
                      ++++|+|+|+...     ..+|..+.+|+||+|||||||||++||+|.+.++.|+|.+|+|.|+.+.+|+ ..||+|+++
T Consensus         1 Tt~s~~flgl~~~-----~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig   75 (649)
T 3i6s_A            1 TTHTSDFLKLNPS-----SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG   75 (649)
T ss_dssp             CCSHHHHTTCCSS-----SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred             CCCChHHcCCCCc-----hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence            5789999999842     4799999999999999999999999999999999999999999999999998 899999999


Q ss_pred             eeecccchhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCC
Q 044993          129 IRHYNKGLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSE  208 (713)
Q Consensus       129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~  208 (713)
                      +++|.+++....    +  +...+..+++|..||||||||||||+.+.+.+.+| ++.|.++||||+|+|++||+|+.. 
T Consensus        76 ~~~f~~~~~~~~----~--~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G-~~~g~~~GvAP~A~l~~~kv~~~~-  147 (649)
T 3i6s_A           76 ANYFNKGILAND----P--TVNITMNSARDTDGHGTHCASITAGNFAKGVSHFG-YAPGTARGVAPRARLAVYKFSFNE-  147 (649)
T ss_dssp             EEECCHHHHHHC----T--TCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETT-EEEEEECCSSTTCEEEEEECEETT-
T ss_pred             eEeccCcccccc----c--ccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccc-cccCceeEECCCCEEEEEeccCCC-
Confidence            999998765441    1  12334567889999999999999999888888888 888899999999999999999976 


Q ss_pred             CccCCCCCCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCCCCccCCC
Q 044993          209 DDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEPQTINNMA  288 (713)
Q Consensus       209 ~~~~~~~gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~~~~~~~a  288 (713)
                               +|..+++++||++|+++|+||||||||.. ...+..+++.+++++|+++||+||+||||+|+...++.+.+
T Consensus       148 ---------g~~~~~i~~Ai~~A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~a  217 (649)
T 3i6s_A          148 ---------GTFTSDLIAAMDQAVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGS  217 (649)
T ss_dssp             ---------EECHHHHHHHHHHHHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCC
T ss_pred             ---------CCCHHHHHHHHHHHHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCC
Confidence                     59999999999999999999999999987 45677889999999999999999999999999999999999


Q ss_pred             CccEEeccccCCceeEEEEEeCCceEEeecccc-cCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccc--cCeEEE
Q 044993          289 PWMLTVGASTMDREFAGYITLGNNKRLRGASLS-VDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKV--QGRILV  365 (713)
Q Consensus       289 p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~-~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl  365 (713)
                      ||+|+|||++.||.|...+.+++++++.|++++ .......+||++..         ....|.+..++..++  +|||||
T Consensus       218 p~vitVgAst~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~---------~~~~C~~~~l~~~~vdl~GkIvl  288 (649)
T 3i6s_A          218 PWILCVASGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK---------TLSDCSSEELLSQVENPENTIVI  288 (649)
T ss_dssp             TTSEEEEEEECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT---------TTTTCCCHHHHTTSSSGGGCEEE
T ss_pred             CceEEEeeeecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc---------cccccccccccccccccCCcEEE
Confidence            999999999999999999999999999999998 44446789999974         457899988888877  999999


Q ss_pred             EEe-----chhhHHHhhcCceEEEEccCC-cccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCc
Q 044993          366 CLH-----EEKGYEAAKKGAVAMITGASG-TFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPA  439 (713)
Q Consensus       366 ~~~-----~~k~~~~~~~Ga~g~i~~~~g-~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~  439 (713)
                      |.|     .+|..+++++|+.|+|+.++. .+..+.+.+|+++|+.++++.|++|++++.+++++|.+..+..+..+.+.
T Consensus       289 c~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~  368 (649)
T 3i6s_A          289 CDDNGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPV  368 (649)
T ss_dssp             ECCCSCHHHHHHHHHHHTCSEEEEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCE
T ss_pred             EeCCCccHHHHHHHHHhcCceEEEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCc
Confidence            998     689999999999999994333 56667889999999999999999999999999999999999988888999


Q ss_pred             cccccCCCCCCCCCCCCCCceeeCCCcEEeeecCCCCCCCCcCCC-CccceeeeccccchhhHHHHHHHHHHHhCCCCCH
Q 044993          440 VASFSSRGPNRIDPSIIKPDVIAPGVNIVAAYTSERGPTGYARDN-RRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSP  518 (713)
Q Consensus       440 ~a~fSS~GPt~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp  518 (713)
                      ++.||||||+...++++||||+|||++|+++++..........+. ....|..+||||||||||||+||||||+||+|+|
T Consensus       369 va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Sp  448 (649)
T 3i6s_A          369 VAASSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSP  448 (649)
T ss_dssp             ECTTSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCH
T ss_pred             ccccCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCH
Confidence            999999999987789999999999999999999865443333222 3358999999999999999999999999999999


Q ss_pred             HHHHHHHHhcccccCCCCCccccC-CCCCCCCCccCccccCccCcCCCCeeecCCccccccccccCCCccceeeeeecCC
Q 044993          519 AAIKSAIMTTARATDANNKPISEF-NGKEATAFAYGSGHVDPNSALDPGLVYDLTLDDYLGYLCNRGYKEDVVKKFVVDP  597 (713)
Q Consensus       519 ~~ik~~L~~TA~~~~~~g~~~~~~-~~~~~~~~~~G~G~id~~~A~~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  597 (713)
                      ++||++||+||.++++.+.++.+. .+.+++++.||+|+||+.+|++||||||+..+||+.|||++||+.++|+.|++.+
T Consensus       449 a~IksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~  528 (649)
T 3i6s_A          449 SAIRSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSS  528 (649)
T ss_dssp             HHHHHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTT
T ss_pred             HHHHHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCC
Confidence            999999999999999999998875 4678899999999999999999999999999999999999999999999999876


Q ss_pred             CCCC--CCCCCCCCCCCCceEEeec-CCce-----EEEEEEEEecCC-CceEEEEEeCCCceeEEEecCeEEEecCCcEE
Q 044993          598 AKHP--CPKSFELANFNYPSIAIPE-LAGS-----VTVTRKLKNVGT-PGTYKAQVKEIPGISTDVEPSSLTFTHVNEEK  668 (713)
Q Consensus       598 ~~~~--~~~~~~~~~ln~ps~~~~~-~~~~-----~t~~~tvtn~~~-~~ty~~~~~~~~g~~v~~~p~~l~~~~~g~~~  668 (713)
                        +.  |+.  ...+||||||++.. +...     ++|+|||||||. ..+|++.++.|.|++|+|+|++|+|++.+|++
T Consensus       529 --~~~~C~~--~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~  604 (649)
T 3i6s_A          529 --ASHNCSN--PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQ  604 (649)
T ss_dssp             --SCC-CCC--CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEE
T ss_pred             --CcCCCCC--chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEE
Confidence              77  986  56799999999987 5555     899999999999 89999999999999999999999998889999


Q ss_pred             EEEEEEEeccCCCCCCCCCeEEEEEEEEc--CCcEEEeeEEEEee
Q 044993          669 TFKITFTLAQNAKPNATNDYVFGELIWSD--GTHRVRSPIALKQK  711 (713)
Q Consensus       669 ~~~v~~~~~~~~~~~~~~~~~~G~l~~~~--~~~~v~~P~~~~~~  711 (713)
                      +|+|||+...    .....|.||+|+|++  +.|.||+||+|+..
T Consensus       605 ~f~v~~~~~~----~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~  645 (649)
T 3i6s_A          605 SYTLTIRYIG----DEGQSRNVGSITWVEQNGNHSVRSPIVTSPI  645 (649)
T ss_dssp             EEEEEEEECC----C---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred             EEEEEEEecc----cCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence            9999999865    345678999999999  89999999999875
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo} Back     alignment and structure
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A* Back     alignment and structure
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis} Back     alignment and structure
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A Back     alignment and structure
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 Back     alignment and structure
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ... Back     alignment and structure
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A* Back     alignment and structure
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ... Back     alignment and structure
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1 Back     alignment and structure
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A* Back     alignment and structure
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E Back     alignment and structure
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A Back     alignment and structure
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens} Back     alignment and structure
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A* Back     alignment and structure
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A Back     alignment and structure
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596} Back     alignment and structure
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A Back     alignment and structure
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli} Back     alignment and structure
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A Back     alignment and structure
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A* Back     alignment and structure
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP} Back     alignment and structure
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus} Back     alignment and structure
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Back     alignment and structure
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ... Back     alignment and structure
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Back     alignment and structure
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A Back     alignment and structure
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} Back     alignment and structure
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A Back     alignment and structure
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A Back     alignment and structure
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A* Back     alignment and structure
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A* Back     alignment and structure
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B Back     alignment and structure
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P Back     alignment and structure
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens} Back     alignment and structure
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P Back     alignment and structure
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A Back     alignment and structure
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B Back     alignment and structure
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens} Back     alignment and structure
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster} Back     alignment and structure
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus} Back     alignment and structure
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 713
d1v6ca_435 c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseud 6e-37
d1r6va_671 c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni 8e-14
d1r6va_671 c.41.1.1 (A:) Fervidolysin {Fervidobacterium penni 2e-04
d1gcia_269 c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 2e-12
d1p8ja2334 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou 1e-11
d1r0re_274 c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carls 4e-11
d1to2e_281 c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie 5e-11
d1to2e_281 c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefacie 1e-04
d1wmda2318 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, 5e-11
d2ixta1309 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus 1e-10
d2id4a2339 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Bak 1e-09
d2pwaa1279 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirach 6e-08
d1dbia_280 c.41.1.1 (A:) Thermostable serine protease {Bacill 5e-07
d1dbia_280 c.41.1.1 (A:) Thermostable serine protease {Bacill 6e-04
d1thma_279 c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgar 1e-05
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Length = 435 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Alkaline serine protease Apa1
species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]

 Score =  141 bits (356), Expect = 6e-37
 Identities = 63/426 (14%), Positives = 136/426 (31%), Gaps = 57/426 (13%)

Query: 147 FDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWY 206
                      + + HGTH     A                   G  P      + V  +
Sbjct: 50  NSGTGNWYQPGNNNAHGTHVAGTIAAI----------ANNEGVVGVMPNQNANIHIVKVF 99

Query: 207 SEDDHNAAHGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMN 266
           +E     +          +         G +++T+SLG         + +         N
Sbjct: 100 NEAGWGYSSSLVAAIDTCVN------SGGANVVTMSLGGSGSTTTERNAL----NTHYNN 149

Query: 267 GVLTVAASGNGGPEPQTINNMAPWMLTVGASTMDREFAGYITLGNNKRLRGASLSVD--M 324
           GVL +AA+GN G    +       +++V A   + + A +    +   + G   ++   +
Sbjct: 150 GVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILSTV 209

Query: 325 PRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGYEAAKKGAVAMI 384
                 L        +  ++        T              +      A+  GA+A  
Sbjct: 210 TVGEGRLADITIGGQSYFSNGVVPHNRLTPSG---------TSYAPAPINASATGALAEC 260

Query: 385 TGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFS 444
           T    +FS            + +   +++ + +   +   +   +          +   +
Sbjct: 261 TVNGTSFSCGN---------MANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSN 311

Query: 445 SRGPNRIDPSII--KPDVIAPGVNIVAAYT----SERGPTGYARDNRRFAFTAMDGTSMS 498
           S  P   +P ++    D+  P V++  A      ++ G +    +     +   +GTSM+
Sbjct: 312 SALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQSTTVSNQGNQDYEYYNGTSMA 371

Query: 499 TPIVAGIAGLIKTVHPDWSPAAIKSAIMTTARATDANNKPISEFNGKEATAFAYGSGHVD 558
           TP V+G+A L+ + HP+ S + +++A+  TA       +               G G ++
Sbjct: 372 TPHVSGVATLVWSYHPECSASQVRAALNATADDLSVAGRD-----------NQTGYGMIN 420

Query: 559 PNSALD 564
             +A  
Sbjct: 421 AVAAKA 426
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 Back     information, alignment and structure
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Length = 671 Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Length = 269 Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334 Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Length = 274 Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Length = 281 Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Length = 318 Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Length = 309 Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 339 Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Length = 279 Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Length = 280 Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query713
d1r6va_671 Fervidolysin {Fervidobacterium pennivorans [TaxId: 100.0
d1v6ca_435 Alkaline serine protease Apa1 {Pseudoalteromonas s 100.0
d1r0re_274 Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1 100.0
d1dbia_280 Thermostable serine protease {Bacillus sp., AK.1 [ 100.0
d1to2e_281 Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' 100.0
d1gcia_269 Subtilisin {Bacillus lentus [TaxId: 1467]} 100.0
d1thma_279 Thermitase {Thermoactinomyces vulgaris [TaxId: 202 100.0
d2ixta1309 Sphericase {Bacillus sphaericus [TaxId: 1421]} 100.0
d2pwaa1279 Proteinase K {Fungus (Tritirachium album), strain 100.0
d1wmda2318 Alkaline serine protease kp-43, N-terminal domain 100.0
d1p8ja2334 Furin, N-terminal domain {Mouse (Mus musculus) [Ta 100.0
d2id4a2339 Kexin, N-terminal domain {Baker's yeast (Saccharom 100.0
d1t1ga_357 Serine-carboxyl proteinase, SCP {Bacillus novosp. 99.96
d1ga6a_369 Serine-carboxyl proteinase, SCP {Pseudomonas sp., 99.94
d1scjb_71 Subtilisin prosegment {Bacillus subtilis [TaxId: 1 97.7
d1v5ib172 Proteinase A inhibitor 1, POIA1 {Oyster mushroom ( 97.14
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 95.8
d1de4c2193 Transferrin receptor ectodomain, apical domain {Hu 89.39
d3bi1a2233 Glutamate carboxypeptidase II {Human (Homo sapiens 84.09
>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Fervidolysin
species: Fervidobacterium pennivorans [TaxId: 93466]

Probab=100.00  E-value=4.8e-51  Score=471.81  Aligned_cols=355  Identities=18%  Similarity=0.140  Sum_probs=253.6

Q ss_pred             ccceeEEecceeeeEEEEcCHHHHH------HhhCCCCeEEEEeccccccCCC----CCccccCCCc-----C-------
Q 044993            5 RELISSSYRRHINGFAADLEEEHAQ------QLANHPEVVSVFLNKPTKKLTT----GAWNFLGLEK-----D-------   62 (713)
Q Consensus         5 ~~~i~~~y~~~~ng~s~~~~~~~~~------~L~~~~~V~~V~~~~~~~~~~~----~s~~~~g~~~-----~-------   62 (713)
                      ..++++.+. .++.+.++++...++      ++..+|+|++|+|+..+++...    ..+.......     .       
T Consensus        52 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~vep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (671)
T d1r6va_          52 NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE  130 (671)
T ss_dssp             TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred             CCEEEEEec-ccceEEEEcCchhHHHHHHHHHHhcCCCceEECcceeEeeccccccCCCccccccccccccccccCcCcc
Confidence            345666665 567778887653322      2345899999999876554221    0000000000     0       


Q ss_pred             --------CCCCCccccccCCCCCccEEEEeccccCCCCCCCCCCCCCCCCCCcccccccCCCCcccccccceeeeeccc
Q 044993           63 --------NVIPSNSTWEKARFGEDVIIGGIDSGICPESESFSDEEMGPIPSKWRGTCQNDDHYGVECNRKLIGIRHYNK  134 (713)
Q Consensus        63 --------~~~~~~~~~~~~~~G~Gv~VgVIDtGid~~Hp~f~d~~~~~~~~~~~g~~~~~~~f~~~~n~ki~g~~~~~~  134 (713)
                              ..+.+.+.|....+|+||+|||||||||++||+|.+                          +++..+++..
T Consensus       131 ~~~~~w~l~~i~~~~a~~~~~tG~gV~VaViDtGvd~~Hpdl~~--------------------------~~~~~~~~~~  184 (671)
T d1r6va_         131 LSNELWGLEAIGVTQQLWEEASGTNIIVAVVDTGVDGTHPDLEG--------------------------QVIAGYRPAF  184 (671)
T ss_dssp             TGGGCHHHHHTTCCHHHHHHCSCTTCEEEEEESCCBTTSGGGTT--------------------------TBCCEEEGGG
T ss_pred             ccccCcChhhcCccHHHHhcCCCCCCEEEEEcCCcCCCChhhcC--------------------------CcccCccccc
Confidence                    011233444445699999999999999999999964                          2333333332


Q ss_pred             chhhhhcCCCCCCCCCCCCCCCCCCCCCchhhhhhhccCCccccCccccccCceeeeecCCCcEEEeeeecCCCCccCCC
Q 044993          135 GLISAATKRNPAFDIPPKLKTGRDLDGHGTHTLSAAAGNFVQYVGAFCNHRYGTAKGGSPRARVASYKVCWYSEDDHNAA  214 (713)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~d~~gHGThVAgiiaG~~~~~~~~~G~~~~g~~~GvAP~A~l~~~kv~~~~~~~~~~~  214 (713)
                      +...            ....++.|..||||||||||+|+.    +..|      +.||||+|+|+.+|++.+...  ...
T Consensus       185 ~~~~------------~~~~~~~d~~gHGT~VAGiiaa~~----~~~g------~~GvAp~a~l~~~rv~~~~~~--~~~  240 (671)
T d1r6va_         185 DEEL------------PAGTDSSYGGSAGTHVAGTIAAKK----DGKG------IVGVAPGAKIMPIVIFDDPAL--VGG  240 (671)
T ss_dssp             TEEE------------CTTCBCCTTCSHHHHHHHHHHCCC----SSSS------CCCSCTTSEEEEEESBCCHHH--HCT
T ss_pred             cCCC------------CCCCcCcccCCCCccccceeeeec----cccc------eeeecCcceEEEEEecccccc--cCC
Confidence            1110            112345677899999999999973    2234      789999999999999964200  000


Q ss_pred             CCCCCCHHHHHHHHHHHHHcCCCeeEeecCCCCCCCCCcchHHHHHHHHhcCCcEEEEecCCCCCCC-CCccCCCCccEE
Q 044993          215 HGNDCMEQDTIEAFDDAIHDGVDIITVSLGYDNIADFLSDGVVIGAFHATMNGVLTVAASGNGGPEP-QTINNMAPWMLT  293 (713)
Q Consensus       215 ~gg~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~a~~~a~~~Gv~vV~AAGN~G~~~-~~~~~~ap~vit  293 (713)
                       .+....+.+++||+||+++|++|||||||+.    .....+..++..+.++|+++|+||||++... .......|++|+
T Consensus       241 -~g~~~~~~i~~ai~~a~~~g~~Vin~S~g~~----~~~~~~~~ai~~a~~~gv~vV~aAGN~~~~~~~~~Pa~~~~vi~  315 (671)
T d1r6va_         241 -NGYVGDDYVAAGIIWATDHGAKVMNHSWGGW----GYSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQ  315 (671)
T ss_dssp             -TSBCCHHHHHHHHHHHHHTTCSEEEECEEBS----CCCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEE
T ss_pred             -CCcccHHHHHHHHHHHHhCCCcEEecccccc----cCChHHHHHHHHHHhccCcEEEEEecCCCCccccCCccCCceEE
Confidence             0245678899999999999999999999987    3456788899999999999999999998643 334456799999


Q ss_pred             eccccCCceeEEEEEeCCceEEeecccccCCCCCceeeEeccccccccCcCCCCCCCCCCCCcccccCeEEEEEechhhH
Q 044993          294 VGASTMDREFAGYITLGNNKRLRGASLSVDMPRKSYPLISGEDARMANATDKDASCKPGTLDRKKVQGRILVCLHEEKGY  373 (713)
Q Consensus       294 VgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~k~~  373 (713)
                      |||++...                                                                        
T Consensus       316 Vga~~~~~------------------------------------------------------------------------  323 (671)
T d1r6va_         316 VAALDYYG------------------------------------------------------------------------  323 (671)
T ss_dssp             EEEEEEET------------------------------------------------------------------------
T ss_pred             EEEecCCC------------------------------------------------------------------------
Confidence            99864221                                                                        


Q ss_pred             HHhhcCceEEEEccCCcccccCCcccEEEeehhhHHHHHHHHhcCCCcEEEEeecceeccccCCCccccccCCCCCCCCC
Q 044993          374 EAAKKGAVAMITGASGTFSASYGFLPVTKLKIKDFEAVLDYIKSTKDAKAFMTDAQTEFAIEPSPAVASFSSRGPNRIDP  453 (713)
Q Consensus       374 ~~~~~Ga~g~i~~~~g~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GPt~~~~  453 (713)
                                                                                    ....++.||+|||..   
T Consensus       324 --------------------------------------------------------------~~~~~a~fS~~g~~~---  338 (671)
T d1r6va_         324 --------------------------------------------------------------GTFRVAGFSSRSDGV---  338 (671)
T ss_dssp             --------------------------------------------------------------TEEEECSSSCCCTTE---
T ss_pred             --------------------------------------------------------------CcceeeeccCCCCCc---
Confidence                                                                          013578999999976   


Q ss_pred             CCCCCceeeCCCcEEeeecCCCCCCCC-----cCCCCccceeeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhc
Q 044993          454 SIIKPDVIAPGVNIVAAYTSERGPTGY-----ARDNRRFAFTAMDGTSMSTPIVAGIAGLIKTVHPDWSPAAIKSAIMTT  528 (713)
Q Consensus       454 ~~~KPDI~APG~~I~sa~~~~~~~~~~-----~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~sp~~ik~~L~~T  528 (713)
                           ||+|||++|+++++........     ......+.|..++|||||||||||++|||+|++|+|++.|||++|++|
T Consensus       339 -----dv~APG~~i~st~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~v~~~L~~t  413 (671)
T d1r6va_         339 -----SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENT  413 (671)
T ss_dssp             -----EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred             -----eEEecCCCeEeecCCCCccccccccccccccCCCeeeeecCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhh
Confidence                 9999999999998754322111     112234689999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCccccCCCCCCCCCccCccccCccCcCCCCee
Q 044993          529 ARATDANNKPISEFNGKEATAFAYGSGHVDPNSALDPGLV  568 (713)
Q Consensus       529 A~~~~~~g~~~~~~~~~~~~~~~~G~G~id~~~A~~~~lv  568 (713)
                      |+++...           ..+..||||+||+.+||+..+.
T Consensus       414 A~~~~~~-----------g~~~~~G~G~vna~~Av~~~~~  442 (671)
T d1r6va_         414 AFDFNGN-----------GWDHDTGYGLVKLDAALQGPLP  442 (671)
T ss_dssp             CBCSSSS-----------SCBTTTBTCBCCHHHHHHCCCC
T ss_pred             CccCCCC-----------CCCCCcccChhCHHHHhhCcCC
Confidence            9987533           3567899999999999986543
>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]} Back     information, alignment and structure
>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]} Back     information, alignment and structure
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]} Back     information, alignment and structure
>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]} Back     information, alignment and structure
>d1gcia_ c.41.1.1 (A:) Subtilisin {Bacillus lentus [TaxId: 1467]} Back     information, alignment and structure
>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]} Back     information, alignment and structure
>d2ixta1 c.41.1.1 (A:1-309) Sphericase {Bacillus sphaericus [TaxId: 1421]} Back     information, alignment and structure
>d2pwaa1 c.41.1.1 (A:1-279) Proteinase K {Fungus (Tritirachium album), strain limber [TaxId: 37998]} Back     information, alignment and structure
>d1wmda2 c.41.1.1 (A:1-318) Alkaline serine protease kp-43, N-terminal domain {Bacillus sp. KSM-KP43 [TaxId: 109322]} Back     information, alignment and structure
>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]} Back     information, alignment and structure
>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]} Back     information, alignment and structure
>d1scjb_ d.58.3.2 (B:) Subtilisin prosegment {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1v5ib1 d.58.3.2 (B:1-72) Proteinase A inhibitor 1, POIA1 {Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure