Citrus Sinensis ID: 045008

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
MAKLSTVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEccccccccEEEEEcccccccccccccEEEEEEccccccccccccEEEEEEEEEEEEcccccEEEEEEEEEEEcccccccEEEEEcccccccccEEEEEEEcccEEEEEEEEEEEEEEEEccccccEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEEEcccccccEEEEEcccccccccccccEEEEEcccccccccccccccccccEEEEEccccccEEEEEEEEEEEcccccccEEEEEccccHHHHcccccEEcccccEEEEEEEEEEEEEEEEcccccEEEEEEEEEEc
Coil and Loop (DISEMBL)
MAKLSTVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYfhdtlsgqnpsaVRIAqatdtdksptlFGVLmmaddpltetpdpksklvgraqglygsasqdqLGLIMSMSFVFVdgsyngssisllgnnramnpvrempivggtGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Flexible Loop (DISEMBL)
MAKLSTVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Low Complexity Region (SEG)
MAKlstvvslliislvAPAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Disordered region (IsUnstruct)
*****TVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYFHDTLS********************LFGVLM**********************LYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVI*
Disordered Region (DISOPRED)
*AKLSTVVSLLIISLVAPAAL*****************NLQFYFHDTLSGQNPSAVRIAQ**DTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Disordered Region (DISEMBL)
MAKLSTVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Disordered Region (DISPRO)
*AKLSTVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKLSTVVSLLIISLVAPAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	182	2.2.26 [Sep-21-2011]
P13240	184	Disease resistance respon	N/A	no	0.714	0.706	0.338	5e-10

>sp|P13240|DR206_PEA Disease resistance response protein 206 OS=Pisum sativum GN=PI206 PE=2 SV=2

 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 12/142 (8%)

Query: 39  NLQFYFHDTL-SGQNP----SAVRIAQ--ATDTDKSP-TLFGVLMMADDPLTETPDPKSK 90
           NL FYFHD L +G+N     SA+  A    + T  +P + FG +++ DDP+T +    SK
Sbjct: 33  NLVFYFHDILYNGKNAANATSAIVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSK 92

Query: 91  LVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGA 150
            VGRAQG Y   +++     +S +FV ++ +++  +I+  G +  +   R++ + GGTG 
Sbjct: 93  QVGRAQGFYIYDTKNTYTSWLSFTFV-LNSTHHQGTITFAGADPIVAKTRDISVTGGTGD 151

Query: 151 FRLARGYAIAQTHWMDLKSGDA 172
           F + RG A   T   D   G+A
Sbjct: 152 FFMHRGIATITT---DAFEGEA 170

Pisum sativum (taxid: 3888)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
224105209	184	predicted protein [Populus trichocarpa]	0.989	0.978	0.682	1e-69
297824947	187	hypothetical protein ARALYDRAFT_480959 [	0.967	0.941	0.672	6e-67
30681257	187	disease resistance-responsive, dirigent	0.961	0.935	0.661	7e-66
225427957	184	PREDICTED: disease resistance response p	1.0	0.989	0.666	3e-64
4803933	276	putative disease resistance response pro	0.956	0.630	0.653	5e-64
255574738	186	Disease resistance response protein, put	0.857	0.838	0.707	6e-64
356544752	183	PREDICTED: disease resistance response p	0.983	0.978	0.629	1e-62
388495566	191	unknown [Lotus japonicus]	0.890	0.848	0.684	1e-61
449458582	184	PREDICTED: disease resistance response p	0.846	0.836	0.638	8e-55
307136164	184	disease resistance response protein [Cuc	0.994	0.983	0.583	2e-54

>gi|224105209|ref|XP_002313728.1| predicted protein [Populus trichocarpa] gi|222850136|gb|EEE87683.1| predicted protein [Populus trichocarpa]

 Score =  267 bits (683), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 127/186 (68%), Positives = 151/186 (81%), Gaps = 6/186 (3%)

Query: 1   MAKLSTVVSLLIISLVA----PAALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAV 56
           MAK + V  LL+ISLV       +  AE+WA+RLE+ KE  TNLQFYFHD LSG+NP+A+
Sbjct: 1   MAKATLV--LLVISLVGVMQWAKSTNAESWASRLEAEKENVTNLQFYFHDILSGKNPTAI 58

Query: 57  RIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFV 116
           ++AQ +  +KSPTLFG +MMADDPLTE PDP SK VGRAQG+YGSA Q++L LIM+M+F 
Sbjct: 59  KVAQPSADNKSPTLFGSIMMADDPLTEGPDPNSKPVGRAQGIYGSAGQNELALIMAMNFA 118

Query: 117 FVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGY 176
           F DG YNGS ISLLG N AMNPVREMPIVGGTG FR ARGYA+AQT+W+DL +GDAIVGY
Sbjct: 119 FTDGIYNGSCISLLGKNPAMNPVREMPIVGGTGLFRFARGYAVAQTYWLDLTTGDAIVGY 178

Query: 177 NVTVIH 182
           NVTV+H
Sbjct: 179 NVTVVH 184

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824947|ref|XP_002880356.1| hypothetical protein ARALYDRAFT_480959 [Arabidopsis lyrata subsp. lyrata] gi|297326195|gb|EFH56615.1| hypothetical protein ARALYDRAFT_480959 [Arabidopsis lyrata subsp. lyrata]

 Score =  258 bits (660), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 119/177 (67%), Positives = 146/177 (82%), Gaps = 1/177 (0%)

Query: 7   VVSLLIISLVAPAALQAETWATRLE-SAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTD 65
           +V L++I  +A    +  +WA RLE + KE  TNLQFYFHDTLSG+NP+AV++AQ TDTD
Sbjct: 11  LVMLIMIMPLAARGSRLYSWANRLEETGKEKVTNLQFYFHDTLSGKNPTAVKVAQGTDTD 70

Query: 66  KSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGS 125
           KSPTLFG + M DD LTET DPKSKLVGRAQGLYGS+ ++++GLIM+MSF F DG Y  S
Sbjct: 71  KSPTLFGAVFMVDDALTETADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDS 130

Query: 126 SISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
           +IS++G N AMNP+REMPIVGGTG FR+ARGYAIA+T+W D K+GDAIVGYNVTV+H
Sbjct: 131 TISMIGKNSAMNPIREMPIVGGTGMFRMARGYAIAKTNWFDPKTGDAIVGYNVTVVH 187

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30681257|ref|NP_850009.1| disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana] gi|28973750|gb|AAO64191.1| putative disease resistance response protein/dirigent protein [Arabidopsis thaliana] gi|50253572|gb|AAT71988.1| At2g21100 [Arabidopsis thaliana] gi|110736722|dbj|BAF00324.1| putative disease resistance response protein [Arabidopsis thaliana] gi|330252029|gb|AEC07123.1| disease resistance-responsive, dirigent domain-containing protein [Arabidopsis thaliana]

 Score =  254 bits (650), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 117/177 (66%), Positives = 148/177 (83%), Gaps = 2/177 (1%)

Query: 7   VVSLLIISLVAPAALQAETWATRLE-SAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTD 65
           V+ ++I+ LVA  + +  +WA RLE + K+  TNLQFYFHDTLSG+NP+AV++AQ TDT+
Sbjct: 12  VMLIMIMPLVAQGS-RLHSWANRLEETGKDKVTNLQFYFHDTLSGKNPTAVKVAQGTDTE 70

Query: 66  KSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGS 125
           KSPTLFG + M DD LTET DPKSKLVGRAQGLYGS+ ++++GLIM+MSF F DG Y  S
Sbjct: 71  KSPTLFGAVFMVDDALTETADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDS 130

Query: 126 SISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
           +IS++G N AMNP+REMPIVGGTG FR+ARGYAIA+T+W D K+GDAIVGYNVT++H
Sbjct: 131 TISMIGKNSAMNPIREMPIVGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427957|ref|XP_002276722.1| PREDICTED: disease resistance response protein 206-like [Vitis vinifera]

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 122/183 (66%), Positives = 148/183 (80%), Gaps = 1/183 (0%)

Query: 1   MAKLSTVVSLLIISLVAP-AALQAETWATRLESAKETTTNLQFYFHDTLSGQNPSAVRIA 59
           MAKL+  + L+ +++  P A  Q   WA RL+S  + TTNLQFYFHDTLSG+ P+AVR+A
Sbjct: 1   MAKLALALLLISMAMAMPWAQPQDLKWAKRLDSGGQPTTNLQFYFHDTLSGKTPTAVRVA 60

Query: 60  QATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVD 119
           QA+ TDKSPTLFG L+MADDPLTE PD  SKLVGRAQGLYGSASQ+  GLIM++S+ F D
Sbjct: 61  QASQTDKSPTLFGALLMADDPLTEGPDLSSKLVGRAQGLYGSASQEGFGLIMALSYGFCD 120

Query: 120 GSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVT 179
           G YNGSSIS+LG N+A+NPVRE+P+VGGTG FR+ARG+A A+THW D  +GDAIV YNVT
Sbjct: 121 GIYNGSSISVLGLNQALNPVRELPVVGGTGVFRMARGFAEARTHWFDPATGDAIVAYNVT 180

Query: 180 VIH 182
           V H
Sbjct: 181 VFH 183

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4803933|gb|AAD29806.1| putative disease resistance response protein [Arabidopsis thaliana]

 Score =  249 bits (635), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 115/176 (65%), Positives = 145/176 (82%), Gaps = 2/176 (1%)

Query: 7   VVSLLIISLVAPAALQAETWATRLE-SAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTD 65
           V+ ++I+ LVA  + +  +WA RLE + K+  TNLQFYFHDTLSG+NP+AV++AQ TDT+
Sbjct: 12  VMLIMIMPLVAQGS-RLHSWANRLEETGKDKVTNLQFYFHDTLSGKNPTAVKVAQGTDTE 70

Query: 66  KSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGS 125
           KSPTLFG + M DD LTET DPKSKLVGRAQGLYGS+ ++++GLIM+MSF F DG Y  S
Sbjct: 71  KSPTLFGAVFMVDDALTETADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDS 130

Query: 126 SISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVI 181
           +IS++G N AMNP+REMPIVGGTG FR+ARGYAIA+T+W D K+GDAIVGYN + I
Sbjct: 131 TISMIGKNSAMNPIREMPIVGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNGSSI 186

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574738|ref|XP_002528277.1| Disease resistance response protein, putative [Ricinus communis] gi|223532314|gb|EEF34115.1| Disease resistance response protein, putative [Ricinus communis]

 Score =  248 bits (634), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 111/157 (70%), Positives = 138/157 (87%), Gaps = 1/157 (0%)

Query: 27  ATRLES-AKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETP 85
           A +L++  KET TNLQFYFHD +SG+N +A+R+AQ+ DT+KSPTLFG L+MADDPLTE P
Sbjct: 30  AKKLKTQKKETVTNLQFYFHDIVSGKNRTAIRVAQSADTEKSPTLFGALIMADDPLTEGP 89

Query: 86  DPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIV 145
           DPKSKLVGRAQGLYGSA Q++L LIM+M++ F  G+YNGSSIS+LG N AM+PVRE+P+V
Sbjct: 90  DPKSKLVGRAQGLYGSAGQNELCLIMAMNYAFTSGAYNGSSISILGKNSAMSPVRELPVV 149

Query: 146 GGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
           GGTG FR+ARGYAIA+THW D+ +GDAIVGYN+TV+H
Sbjct: 150 GGTGVFRMARGYAIARTHWFDITTGDAIVGYNLTVVH 186

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544752|ref|XP_003540811.1| PREDICTED: disease resistance response protein 206-like [Glycine max]

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 114/181 (62%), Positives = 140/181 (77%), Gaps = 2/181 (1%)

Query: 4   LSTVVSLLIISLVAPAALQAETWATRLESA-KETTTNLQFYFHDTLSGQNPSAVRIAQAT 62
           L T+  +  +++     ++A  W    E   KET TNL+FYFHDTLSGQNPSAVR+A+  
Sbjct: 3   LITISIMCAMAVTESLKVKAGNWGASFEGENKETVTNLEFYFHDTLSGQNPSAVRVAEPL 62

Query: 63  DTDK-SPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGS 121
           D  K S TLFG +MMADDPLTET DPKSK+VGRAQGLYGS+ Q ++GL+M+MS+ F DG 
Sbjct: 63  DKKKTSMTLFGAIMMADDPLTETSDPKSKIVGRAQGLYGSSCQQEIGLLMAMSYSFTDGP 122

Query: 122 YNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVI 181
           YNGSS +LLG N AMNPVREMP+VGGTG FR+ARGYA+A+THW D  +GDAIV YNVT++
Sbjct: 123 YNGSSFALLGKNSAMNPVREMPVVGGTGLFRMARGYALAKTHWFDPTTGDAIVAYNVTLL 182

Query: 182 H 182
           H
Sbjct: 183 H 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495566|gb|AFK35849.1| unknown [Lotus japonicus]

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 113/165 (68%), Positives = 134/165 (81%), Gaps = 3/165 (1%)

Query: 21  LQAETWATRL--ESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSP-TLFGVLMMA 77
           L+A  W      E+ KET TNLQFYFHDTLSG+NPSAVR+AQ  D +KS  T FG +MMA
Sbjct: 27  LKAGNWGASFDGENNKETVTNLQFYFHDTLSGRNPSAVRVAQPEDKNKSLLTQFGTIMMA 86

Query: 78  DDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMN 137
           DDPLTET DPKS++VGRAQGLYGS+ Q ++GL+M+MS+ F DG YN SS SL+G N AMN
Sbjct: 87  DDPLTETSDPKSEMVGRAQGLYGSSCQQEIGLLMAMSYSFTDGPYNRSSFSLIGKNAAMN 146

Query: 138 PVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
           P+REMP+VGGTG FR+ARGYAIA+THW D  +GDAIVGYNVT+IH
Sbjct: 147 PIREMPVVGGTGLFRMARGYAIAKTHWFDPTTGDAIVGYNVTLIH 191

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458582|ref|XP_004147026.1| PREDICTED: disease resistance response protein 206-like [Cucumis sativus] gi|449489684|ref|XP_004158385.1| PREDICTED: disease resistance response protein 206-like [Cucumis sativus]

 Score =  218 bits (555), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 126/155 (81%), Gaps = 1/155 (0%)

Query: 28  TRLESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDP 87
           +R  S K+T TN+QFYFHDT+SG+ PSA+++A+A  + KSPTLFG L +ADDPLTE+PDP
Sbjct: 31  SRHVSQKQTVTNIQFYFHDTVSGKTPSAIKVAEAPTSSKSPTLFGALFIADDPLTESPDP 90

Query: 88  KSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGG 147
           KSK VGRAQGLYGSA Q +LGL+M++++ F  G + GSS+ +LG N  M+ VRE+PIVGG
Sbjct: 91  KSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGKFKGSSVVVLGKNSVMHTVRELPIVGG 150

Query: 148 TGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
           TG FR ARGYA A+T+W++   GDAIVGYNVTVIH
Sbjct: 151 TGVFRFARGYAEARTYWLN-SVGDAIVGYNVTVIH 184

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307136164|gb|ADN34005.1| disease resistance response protein [Cucumis melo subsp. melo]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 108/185 (58%), Positives = 139/185 (75%), Gaps = 4/185 (2%)

Query: 1   MAKLSTVVS--LLIISLVAPAALQAETWA-TRLESAKETTTNLQFYFHDTLSGQNPSAVR 57
           MA LS   S  LLI +L    +L  +    +R  S K+T TN+QFYFHDT+SG+ PSA++
Sbjct: 1   MANLSVSFSFILLIATLPWTQSLNPKKPVISRHLSQKQTVTNIQFYFHDTVSGKTPSAIK 60

Query: 58  IAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVF 117
           +A+A  + KSPTLFG L +ADDPLTE+PDPKSK VGRAQGLYGSA+Q ++GL+M++++ F
Sbjct: 61  VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAAQQEIGLMMALTYEF 120

Query: 118 VDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYN 177
             G + GSSI +LG N  M+ VRE+P+VGGTG FR ARGYA A+T+W +   GDAIVGYN
Sbjct: 121 TAGEFKGSSIVVLGKNSVMHTVRELPVVGGTGVFRFARGYAEARTYWFN-TLGDAIVGYN 179

Query: 178 VTVIH 182
           VTVIH
Sbjct: 180 VTVIH 184

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
TAIR|locus:2047002	187	AT2G21100 "AT2G21100" [Arabido	0.868	0.844	0.704	8.1e-60
TAIR|locus:2196282	185	AT1G58170 "AT1G58170" [Arabido	0.840	0.827	0.477	4.4e-36
TAIR|locus:2162366	182	AT5G42510 "AT5G42510" [Arabido	0.802	0.802	0.506	4.4e-36
TAIR|locus:2162361	185	AT5G42500 "AT5G42500" [Arabido	0.785	0.772	0.510	5.7e-36
TAIR|locus:2009769	189	AT1G65870 "AT1G65870" [Arabido	0.796	0.767	0.489	1.2e-35
TAIR|locus:2035661	187	AT1G55210 "AT1G55210" [Arabido	0.802	0.780	0.489	5.8e-34
TAIR|locus:2017689	193	AT1G22900 "AT1G22900" [Arabido	0.785	0.740	0.475	2.5e-33
TAIR|locus:2047127	186	AT2G21110 "AT2G21110" [Arabido	0.851	0.833	0.475	3.2e-33
TAIR|locus:2154359	191	AT5G49040 "AT5G49040" [Arabido	0.818	0.780	0.463	1.1e-32
TAIR|locus:2121249	190	AT4G38700 "AT4G38700" [Arabido	0.818	0.784	0.464	4.2e-31

TAIR|locus:2047002 AT2G21100 "AT2G21100" [Arabidopsis thaliana (taxid:3702)]

 Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
 Identities = 112/159 (70%), Positives = 137/159 (86%)

Query:    25 TWATRLE-SAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTE 83
             +WA RLE + K+  TNLQFYFHDTLSG+NP+AV++AQ TDT+KSPTLFG + M DD LTE
Sbjct:    29 SWANRLEETGKDKVTNLQFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALTE 88

Query:    84 TPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMP 143
             T DPKSKLVGRAQGLYGS+ ++++GLIM+MSF F DG Y  S+IS++G N AMNP+REMP
Sbjct:    89 TADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMP 148

Query:   144 IVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
             IVGGTG FR+ARGYAIA+T+W D K+GDAIVGYNVT++H
Sbjct:   149 IVGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIMH 187

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2196282 AT1G58170 "AT1G58170" [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 73/153 (47%), Positives = 104/153 (67%)

Query:    30 LESAKETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKS 89
             L   KE  T+ + Y+HD ++GQ+ S+V I          T FG++ M D+PLT TP   S
Sbjct:    32 LHHKKEKLTHFRVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTPKLSS 91

Query:    90 KLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTG 149
             K+VGRAQG Y   S++++GL+M+M+F  +DG YNGS+I++LG N   + VREMP++GG+G
Sbjct:    92 KMVGRAQGFYAGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSG 151

Query:   150 AFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
              FR ARGY  A TH  +LK+G+AIV YN  ++H
Sbjct:   152 LFRFARGYVQASTHEFNLKTGNAIVEYNCYLLH 184

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2162366 AT5G42510 "AT5G42510" [Arabidopsis thaliana (taxid:3702)]

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 75/148 (50%), Positives = 101/148 (68%)

Query:    35 ETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGR 94
             E  T+L FYFHD +SG  P+AV++A+A  T      FGV+M+ADDPLTE PDP SK VGR
Sbjct:    37 EKFTHLHFYFHDVISGDKPTAVKVAEARPTTTLNVKFGVIMIADDPLTEGPDPSSKEVGR 96

Query:    95 AQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLA 154
             AQG+Y S +   +   M  ++VF  G +NGS+I++ G N   + VRE+PI+GGTGAFR A
Sbjct:    97 AQGMYASTAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELPIIGGTGAFRFA 156

Query:   155 RGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
             RGYA+ +T+   +   DA+V YNV + H
Sbjct:   157 RGYALPKTY--KIVGLDAVVEYNVFIWH 182

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2162361 AT5G42500 "AT5G42500" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 74/145 (51%), Positives = 99/145 (68%)

Query:    38 TNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQG 97
             T+L FYFHD +SG  P+AV++A+A  T+ S   FGV+M+ADDPLTE PDP SK VGRAQG
Sbjct:    43 THLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQG 102

Query:    98 LYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGY 157
             +Y   +   +   M  +  F  G +NGS++++ G N   + VREMPI+GGTGAFR ARGY
Sbjct:   103 MYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGY 162

Query:   158 AIAQTHWMDLKSGDAIVGYNVTVIH 182
             A A+T+   +   DA+V YNV + H
Sbjct:   163 AQAKTY--KVVGLDAVVEYNVFIWH 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2009769 AT1G65870 "AT1G65870" [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
 Identities = 71/145 (48%), Positives = 104/145 (71%)

Query:    38 TNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQG 97
             T+L FYFHD +SG  P++V++A    T+ S T FG++ + DD LT  P+  S+ VGRAQG
Sbjct:    45 THLHFYFHDIVSGDKPTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQG 104

Query:    98 LYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGY 157
             +Y SA Q++LGL+M+ + VF  G ++ S++++ G N  ++ VREMPI+GGTGAFR  RGY
Sbjct:   105 MYASADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGY 164

Query:   158 AIAQTHWMDLKSGDAIVGYNVTVIH 182
             A+A+T   ++ SGDA+V YNV + H
Sbjct:   165 ALAKTLVFNITSGDAVVEYNVYIWH 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0005618 "cell wall" evidence=IDA

TAIR|locus:2035661 AT1G55210 "AT1G55210" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 73/149 (48%), Positives = 102/149 (68%)

Query:    34 KETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVG 93
             KE  T+ + Y+HD LSG NP+++ I Q   T+ S   FG + M D+ LT      S ++G
Sbjct:    41 KEKLTHFKVYWHDILSGPNPTSIMI-QPPVTNSS--YFGAISMIDNALTAKVPMNSTVLG 97

Query:    94 RAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRL 153
             +AQG Y  A+Q +LG +M+M+F F  G YNGS+I++LG N A++ VREMPIVGG+G FR 
Sbjct:    98 QAQGFYAGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRF 157

Query:   154 ARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
             ARGY  A+T W++LK+GDA V Y+  V+H
Sbjct:   158 ARGYVEARTKWINLKNGDATVEYSCYVLH 186

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

GO:0009807 "lignan biosynthetic process" evidence=ISS

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2017689 AT1G22900 "AT1G22900" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 69/145 (47%), Positives = 97/145 (66%)

Query:    38 TNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQG 97
             T+L FYFHD +SG  P+ +R+A+A  T+ S T+FG +++ D P+TE P+  SK VGRAQG
Sbjct:    51 THLHFYFHDIISGDKPTTIRVAEAPGTNSSATVFGAVLIVDAPVTEGPELSSKEVGRAQG 110

Query:    98 LYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGY 157
             LY S      G  M  +FVF +G +NGS+ +L G N  +   RE+PI+GGTG FR ARGY
Sbjct:   111 LYASTDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFARGY 170

Query:   158 AIAQTHWMDLKSGDAIVGYNVTVIH 182
             A+ +T+   + + DA+V YNV + H
Sbjct:   171 ALPKTY--KVVNIDAVVEYNVFIWH 193

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2047127 AT2G21110 "AT2G21110" [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 76/160 (47%), Positives = 102/160 (63%)

Query:    28 TRLESAKE-TTTNLQFYFHDTLSGQNPSAVRIAQAT----DTDKSPTLFGVLMMADDPLT 82
             TR  + K+   TNL F+FHDTL+  NPSA+ IA+ T    D D SP+ FG L   DDPLT
Sbjct:    26 TRPITPKQLVVTNLHFFFHDTLTAPNPSAILIAKPTHTRGDNDSSPSPFGSLFALDDPLT 85

Query:    83 ETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREM 142
               PDPKS+ +G A+G+Y S+ +    L M + F F  G +NGSSI++   N      RE+
Sbjct:    86 VGPDPKSEKIGNARGMYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREV 145

Query:   143 PIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
              +VGG G FR+ARG A   T++++L +GDAIV YNVT+ H
Sbjct:   146 AVVGGRGRFRMARGVAQLNTYYVNLTNGDAIVEYNVTLYH 185

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2154359 AT5G49040 "AT5G49040" [Arabidopsis thaliana (taxid:3702)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 69/149 (46%), Positives = 100/149 (67%)

Query:    34 KETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVG 93
             KE  T+L+ Y+HD ++G+NPS++RI        S + FG + M D+ LT      S +VG
Sbjct:    42 KEKLTHLRVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDNALTLDVPINSTVVG 101

Query:    94 RAQGLYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRL 153
             +AQG+Y  A+Q ++GL+M+M+  F  G YNGS+I++LG N  M+ VREMP+VGG+G FR 
Sbjct:   102 QAQGMYVGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRF 161

Query:   154 ARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
             ARGY  A+T   D+K+GDA V  N  ++H
Sbjct:   162 ARGYVEARTKLFDMKTGDATVESNCYILH 190

GO:0003674 "molecular_function" evidence=ND

GO:0006952 "defense response" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0009807 "lignan biosynthetic process" evidence=ISS

TAIR|locus:2121249 AT4G38700 "AT4G38700" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 72/155 (46%), Positives = 97/155 (62%)

Query:    34 KETTTNLQFYFHDTLSGQNPSAVRIAQA--TDTDKSPTLFGVLMMADDPLTETPDPKSKL 91
             +E  T ++FY HDTLSGQNP+AVRIA A  T    SP  FG L + DDPLT  P+  SK 
Sbjct:    35 EEKVTRVRFYLHDTLSGQNPTAVRIAHANLTGGSASPVGFGSLFVIDDPLTVGPEKHSKE 94

Query:    92 VGRAQGLYGSASQD--QLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPV--REMPIVGG 147
             +G  QG+Y S  +D  +  ++M     F  G +NGSSIS+   N     V  RE+ IVGG
Sbjct:    95 IGNGQGMYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGG 154

Query:   148 TGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH 182
              G FR+ARG+   +T+ +D+K+GDA++ Y+ TV H
Sbjct:   155 RGKFRMARGFVKVKTNKIDMKTGDAVLRYDATVYH 189

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0006952 "defense response" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pm.C_LG_IX000183 hypothetical protein (184 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	182
pfam03018	144	pfam03018, Dirigent, Dirigent-like protein	9e-68

>gnl|CDD|217321 pfam03018, Dirigent, Dirigent-like protein

 Score =  202 bits (517), Expect = 9e-68
 Identities = 78/145 (53%), Positives = 102/145 (70%), Gaps = 3/145 (2%)

Query: 38  TNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQG 97
           T+L FY HD ++G N +AV++A    T+ S   FG +++ DDPLTE PD  SKLVGRAQG
Sbjct: 3   THLHFYMHDIVTGPNATAVQVASPPGTNSSG--FGTVVVIDDPLTEGPDLNSKLVGRAQG 60

Query: 98  LYGSASQDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGY 157
            Y  ASQD L L+M+ +FVF  G YNGS+++++G N     VRE+ +VGGTG FR+ARGY
Sbjct: 61  FYVYASQDGLSLLMAFTFVFTSGEYNGSTLAVMGRNPVFEEVRELSVVGGTGKFRMARGY 120

Query: 158 AIAQTHWMDLKSGDAIVGYNVTVIH 182
           A+A+T+   L SGDAIV  NV V H
Sbjct: 121 ALARTY-FSLTSGDAIVELNVYVKH 144

This family contains a number of proteins which are induced during disease response in plants. Members of this family are involved in lignification. Length = 144

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
PF03018	144	Dirigent: Dirigent-like protein; InterPro: IPR0042	100.0
PF06351	176	Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR	97.41
PLN02343	229	allene oxide cyclase	96.7

>PF03018 Dirigent: Dirigent-like protein; InterPro: IPR004265 This family contains a number of proteins which are induced during disease response in plants

Probab=100.00  E-value=4.5e-54  Score=339.05  Aligned_cols=144  Identities=51%  Similarity=0.870  Sum_probs=135.9

Q ss_pred             CceEEEEEeeeccCCCCcceEEEeecCCCCCCCCCceeEEEEeeccccCCCCCCCceEeEEEEEEEecCCCceEEEEEEE
Q 045008           36 TTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQDQLGLIMSMSF  115 (182)
Q Consensus        36 k~t~l~fY~Hd~~~gpn~t~~~v~~~~~~~~s~~~FG~~~v~d~~lt~gp~~~S~~vGraqG~~~~~~~~~~~~~~~~~~  115 (182)
                      |++||+|||||+++|||+|+++|+.++.++.  .+||+++|+|||||+||+++||+||||||+|+.+++++.+|++++++
T Consensus         1 ~~t~l~fY~H~~~~g~n~t~~~v~~~~~~~~--~~FG~~~V~D~~lt~gp~~~S~~VGraqG~~~~~s~~~~~~~~~~~~   78 (144)
T PF03018_consen    1 KETHLHFYMHDIVSGPNPTAVVVAEPPGPSS--SGFGTVVVFDDPLTEGPDPDSKLVGRAQGFYVSASLDGSSWFMSFTL   78 (144)
T ss_pred             CceEEEEEeeecCCCCCCCEEEeccCCCCCC--CCCcEEEEEeeceEcCCCCCCccceEEEEEEEeecccCccEEEEEEE
Confidence            7899999999999999999999998775433  38999999999999999999999999999999999999999999999


Q ss_pred             EEecccccCceEEEecCcCCCCCceeeeeecccceeeeeeEEEEEEEEEeeCCCCCeEEEEEEEEEC
Q 045008          116 VFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVIH  182 (182)
Q Consensus       116 vF~~g~~~GStl~v~G~~~~~~~~~E~~VVGGTG~Fr~ArG~a~~~t~~~d~~~~~~i~e~~V~v~h  182 (182)
                      +|++++||||||+++|+++..+++||||||||||+|||||||++++++ .+..++++|+|||||++|
T Consensus        79 vF~~g~~~GStl~v~G~~~~~~~~~e~~VVGGTG~Fr~ArG~~~~~~~-~~~~~~~~v~e~~v~~~h  144 (144)
T PF03018_consen   79 VFEDGEYNGSTLSVMGRDPFFEPVRELAVVGGTGEFRMARGYAKLRTV-FDSSGGNAVLELNVHLFH  144 (144)
T ss_pred             EEEecccCCCeEEEeCCCcccCcccEEeEecCCCeEcceEEEEEEEEE-eecCCCCEEEEEEEEEEC
Confidence            999999999999999999999999999999999999999999999999 445578999999999998

>PF06351 Allene_ox_cyc: Allene oxide cyclase; InterPro: IPR009410 This family consists of several plant specific allene oxide cyclase proteins (5

Probab=97.41  E-value=0.0028  Score=50.99  Aligned_cols=119  Identities=23%  Similarity=0.276  Sum_probs=73.2

Q ss_pred             CCceEEEEEeeeccCCCCcceEEEeecCCCCCCCCCceeEEEEeeccccCCCCCCCceEeEEEEEEEecC----CCceEE
Q 045008           35 ETTTNLQFYFHDTLSGQNPSAVRIAQATDTDKSPTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQ----DQLGLI  110 (182)
Q Consensus        35 ~k~t~l~fY~Hd~~~gpn~t~~~v~~~~~~~~s~~~FG~~~v~d~~lt~gp~~~S~~vGraqG~~~~~~~----~~~~~~  110 (182)
                      .|...|+.|=-+.+.--.|.-.++-     ..+....|..+=|.|+|++|..  -+.+|--+|+-+.-..    .+-.+=
T Consensus         5 ~kvqel~vyeiNErdR~SPa~L~ls-----~k~~nslGDlvpFsNklY~g~l--~~rlGitaG~Cvliq~~p~k~GdryE   77 (176)
T PF06351_consen    5 TKVQELSVYEINERDRGSPAYLRLS-----QKSVNSLGDLVPFSNKLYDGDL--QKRLGITAGICVLIQHVPEKKGDRYE   77 (176)
T ss_dssp             ---EEEEEEEE--S-S--S--B--S-----SSSSS-TT-EEEEEEEEEETTS--S-EEEEEEEEEEEEEEECCCTEEEEE
T ss_pred             cceEEEEEEEEcccccCCCcEEEcc-----cccchhcccccccccccccchh--hhhhcccceEEEEEEeccccCCceEE
Confidence            5666777774333321122223332     1233558999999999999975  6789999999765432    233444


Q ss_pred             EEEEEEEecccccCceEEEecCcCCCCCceeeeeecccceeeeeeEEEEEEEEEe
Q 045008          111 MSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPIVGGTGAFRLARGYAIAQTHWM  165 (182)
Q Consensus       111 ~~~~~vF~~g~~~GStl~v~G~~~~~~~~~E~~VVGGTG~Fr~ArG~a~~~t~~~  165 (182)
                      -.+++.|.+  | | .|+|+|..-..+ ..-++|.||||-|+.|+|-++++.+-+
T Consensus        78 aiySfyfGd--y-G-hISvqGpy~t~e-DtyLAVTGGtGiF~g~~GqVkL~qivf  127 (176)
T PF06351_consen   78 AIYSFYFGD--Y-G-HISVQGPYLTYE-DTYLAVTGGTGIFEGVYGQVKLHQIVF  127 (176)
T ss_dssp             EEEEEE-GG--G-E-EEEEEEEEETTS--EEEEEEEEEETTTT-EEEEEEEEEET
T ss_pred             EEEEEEecc--c-c-eEEEeccccccc-ceeEEEeccCceeecceEEEEEEEeec
Confidence            566777744  3 4 699999986654 468999999999999999999887754

3.99.6 from EC). The allene oxide cyclase (AOC)-catalysed step in jasmonate (JA) biosynthesis is important in the wound response of tomato [].; GO: 0016853 isomerase activity, 0009507 chloroplast; PDB: 2GIN_A 2DIO_B 2BRJ_B 2Q4I_B 1Z8K_A 1ZVC_A.

>PLN02343 allene oxide cyclase

Probab=96.70  E-value=0.041  Score=46.02  Aligned_cols=90  Identities=26%  Similarity=0.280  Sum_probs=70.3

Q ss_pred             CCceeEEEEeeccccCCCCCCCceEeEEEEEEEecC----CCceEEEEEEEEEecccccCceEEEecCcCCCCCceeeee
Q 045008           69 TLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQ----DQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPI  144 (182)
Q Consensus        69 ~~FG~~~v~d~~lt~gp~~~S~~vGraqG~~~~~~~----~~~~~~~~~~~vF~~g~~~GStl~v~G~~~~~~~~~E~~V  144 (182)
                      ...|+++=|.|.|++|-  --|.+|--.|+-+.-..    .+..+=-.+++.|.|  | | .|+|||..-.-++ .-++|
T Consensus        85 ~sLGDlVPFsNKlY~g~--L~kRlGiTaG~Cvliq~~pek~gDryEa~ySfyfGD--y-G-HisvqGpyltyeD-t~Lai  157 (229)
T PLN02343         85 NALGDLVPFTNKLYTGD--LKKRLGITAGLCVLIQHVPEKKGDRYEAIYSFYFGD--Y-G-HISVQGPYLTYED-TYLAI  157 (229)
T ss_pred             ccccceeccccccccch--hhhhhcccceeEEEEEeccccCCceeEEEEEEEecC--c-c-eeEEecccccccc-ceEEe
Confidence            45899999999999986  35678988998665432    244566777888854  3 4 5999999866544 58999


Q ss_pred             ecccceeeeeeEEEEEEEEEe
Q 045008          145 VGGTGAFRLARGYAIAQTHWM  165 (182)
Q Consensus       145 VGGTG~Fr~ArG~a~~~t~~~  165 (182)
                      .||+|-|+.|+|-+++..+.+
T Consensus       158 TGGsGiFega~GqvkL~qivf  178 (229)
T PLN02343        158 TGGSGIFEGAYGQVKLHQIVF  178 (229)
T ss_pred             ecCcceeecceeEEEEeeeee
Confidence            999999999999999887654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	182
2brj_A	188	Arabidopsis thaliana genomic DNA, chromosome 3, TA	98.58
4h6b_A	195	Allene oxide cyclase; B-barrel, oxylipins, fatty a	98.31

>2brj_A Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone\:K13N2; cyclase, jasmonate synthesis, allene oxide cyclase, beta barrel; 1.5A {Arabidopsis thaliana} SCOP: b.159.1.1 PDB: 2dio_A* 2gin_A 1z8k_A* 2q4i_A 1zvc_A

Probab=98.58  E-value=1.2e-06  Score=70.05  Aligned_cols=101  Identities=24%  Similarity=0.191  Sum_probs=79.2

Q ss_pred             CCceeEEEEeeccccCCCCCCCceEeEEEEEEEec----CCCceEEEEEEEEEecccccCceEEEecCcCCCCCceeeee
Q 045008           69 TLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSAS----QDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPI  144 (182)
Q Consensus        69 ~~FG~~~v~d~~lt~gp~~~S~~vGraqG~~~~~~----~~~~~~~~~~~~vF~~g~~~GStl~v~G~~~~~~~~~E~~V  144 (182)
                      ..-|..+.|+++|.+|..  -+.||.-+|+-+...    +.+..+-..+++.|.+.   | .|+|+|..... +...++|
T Consensus        43 ~slGDlvpFsNkLydg~l--~~rvG~taG~Cv~~~~~p~~~gdryE~tyS~yfgd~---G-hISvQGpy~t~-~Dt~LAI  115 (188)
T 2brj_A           43 FGLGDLVPFTNKLYTGDL--KKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGDY---G-HLSVQGPYLTY-EDSFLAI  115 (188)
T ss_dssp             SCTTCEEEECCEEEETTS--SCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGGG---E-EEEEEEEEETT-BCEEEEE
T ss_pred             cCcccEEeeccccccccc--ceeccccceEEEEEEecCCCCCcEEEEEEEEEeCCC---c-eEEEecccccc-ccceeeE
Confidence            458999999999997764  588999999977664    33456777778888543   4 59999996433 3468999


Q ss_pred             ecccceeeeeeEEEEEEEEEeeCCCCCeEEEEEEEEE
Q 045008          145 VGGTGAFRLARGYAIAQTHWMDLKSGDAIVGYNVTVI  181 (182)
Q Consensus       145 VGGTG~Fr~ArG~a~~~t~~~d~~~~~~i~e~~V~v~  181 (182)
                      .||||.|+.|+|.++++++.+ +    .-++|.+||.
T Consensus       116 TGGTGif~gA~G~Vkl~~i~~-P----~k~~yTf~L~  147 (188)
T 2brj_A          116 TGGAGIFEGAYGQVKLQQLVY-P----TKLFYTFYLK  147 (188)
T ss_dssp             EEEEETTTTCEEEEEEEEEET-T----TEEEEEEEEE
T ss_pred             ecCcceEcceEEEEEEEeecc-C----ceEEEEEEEe
Confidence            999999999999999998865 2    2578888774

>4h6b_A Allene oxide cyclase; B-barrel, oxylipins, fatty acid, metabolites, allene-oxide C activity, isomerase; HET: 10X 10Y; 1.35A {Physcomitrella patens} PDB: 4h6c_A 4h6a_A* 4h69_A*

Probab=98.31  E-value=7.7e-06  Score=65.68  Aligned_cols=90  Identities=23%  Similarity=0.250  Sum_probs=70.2

Q ss_pred             CCceeEEEEeeccccCCCCCCCceEeEEEEEEEec----CCCceEEEEEEEEEecccccCceEEEecCcCCCCCceeeee
Q 045008           69 TLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSAS----QDQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMPI  144 (182)
Q Consensus        69 ~~FG~~~v~d~~lt~gp~~~S~~vGraqG~~~~~~----~~~~~~~~~~~~vF~~g~~~GStl~v~G~~~~~~~~~E~~V  144 (182)
                      ...|+++.|.++|.+|..  -+.||-..|+-+.-.    ..+..+--.+++.|.+   .| +|+++|..-..+ ..-++|
T Consensus        51 ~slGDLvpFsnkLydg~l--~~RiGitaG~Cv~i~~~~~k~GdryEci~Tf~fGD---~G-hIsvqGpy~t~e-Ds~lAI  123 (195)
T 4h6b_A           51 NSLGDLVPFSNKIYDGSL--KTRLGITAGLCTLISHSDQKNGDRYEALYSFYFGD---YG-HISVQGPYITYE-DSYLAI  123 (195)
T ss_dssp             CCTTCEEEECCEEEETTS--CCEEEEEEEEEEEEEEETTTTEEEEEEEEEEECGG---GC-EEEEEEEEETTB-CEEEEE
T ss_pred             cccccccccccccccccc--cccccccccEEEEEeecCCCCCceEEEEEEEEecC---Cc-eEEEecceeccC-ceeEEE
Confidence            458999999999999986  678999999976653    2233444556777754   26 599999975443 357999


Q ss_pred             ecccceeeeeeEEEEEEEEEe
Q 045008          145 VGGTGAFRLARGYAIAQTHWM  165 (182)
Q Consensus       145 VGGTG~Fr~ArG~a~~~t~~~  165 (182)
                      +||||.|+.|+|-+++..+.+
T Consensus       124 TGGTGiF~Ga~GqVkl~qiv~  144 (195)
T 4h6b_A          124 TGGSGIFAGCYGQAKLHQIIF  144 (195)
T ss_dssp             EEESGGGTTCEEEEEEEEEET
T ss_pred             ecCcceEcccEEEEEEeEeee
Confidence            999999999999999887754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	182
d2brja1	174	Allene oxide cyclase, AOC {Thale cress (Arabidopsi	96.93

>d2brja1 b.159.1.1 (A:15-188) Allene oxide cyclase, AOC {Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]}

class: All beta proteins
fold: AOC barrel-like
superfamily: Allene oxide cyclase-like
family: Allene oxide cyclase-like
domain: Allene oxide cyclase, AOC
species: Thale cress (Arabidopsis thaliana), chloroplast AOC2 [TaxId: 3702]

Probab=96.93  E-value=0.0039  Score=47.14  Aligned_cols=91  Identities=26%  Similarity=0.269  Sum_probs=71.2

Q ss_pred             CCCceeEEEEeeccccCCCCCCCceEeEEEEEEEecC----CCceEEEEEEEEEecccccCceEEEecCcCCCCCceeee
Q 045008           68 PTLFGVLMMADDPLTETPDPKSKLVGRAQGLYGSASQ----DQLGLIMSMSFVFVDGSYNGSSISLLGNNRAMNPVREMP  143 (182)
Q Consensus        68 ~~~FG~~~v~d~~lt~gp~~~S~~vGraqG~~~~~~~----~~~~~~~~~~~vF~~g~~~GStl~v~G~~~~~~~~~E~~  143 (182)
                      -...|..+=|-|+|.+|.  .-|.+|--.|+-+.-..    .+..+--.+++.|.|  | | .|++||.....++ .-++
T Consensus        28 ~n~lGDlVpFsNkly~g~--l~kRlGitaG~C~liq~~pek~gdryEa~ySfyfGD--y-G-hISvqGpyltyeD-tyla  100 (174)
T d2brja1          28 MFGLGDLVPFTNKLYTGD--LKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFGD--Y-G-HLSVQGPYLTYED-SFLA  100 (174)
T ss_dssp             SSCTTCEEEECCEEEETT--SSCEEEEEEEEEEEEEEEGGGTEEEEEEEEEEECGG--G-E-EEEEEEEEETTBC-EEEE
T ss_pred             cccccccccccchhcccc--hhhhccceeeEEEEEEecCCcCcceeEEEEEEEecC--c-c-cEEEecccccccc-ceee
Confidence            345899999999999765  45789999998765542    234566777888865  3 4 5999999877654 5899


Q ss_pred             eecccceeeeeeEEEEEEEEEe
Q 045008          144 IVGGTGAFRLARGYAIAQTHWM  165 (182)
Q Consensus       144 VVGGTG~Fr~ArG~a~~~t~~~  165 (182)
                      |+||||-|+.|+|-+++..+.+
T Consensus       101 iTGGsGiFeGa~GqVkL~qivf  122 (174)
T d2brja1         101 ITGGAGIFEGAYGQVKLQQLVY  122 (174)
T ss_dssp             EEEEEETTTTCEEEEEEEEEET
T ss_pred             eecccceeecceeEEEEeeeee
Confidence            9999999999999998887654