Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
ID Alignment Graph Length
Definition
E-value Query 82
smart00271 60
smart00271, DnaJ, DnaJ molecular chaperone homolog
3e-11 pfam00226 63
pfam00226, DnaJ, DnaJ domain
7e-11 cd06257 55
cd06257, DnaJ, DnaJ domain or J-domain
2e-10 TIGR02349 354
TIGR02349, DnaJ_bact, chaperone protein DnaJ
5e-08 COG2214 237
COG2214, CbpA, DnaJ-class molecular chaperone [Pos
6e-08 COG0484 371
COG0484, DnaJ, DnaJ-class molecular chaperone with
8e-08 PRK14296 372
PRK14296, PRK14296, chaperone protein DnaJ; Provis
1e-07 PRK14280 376
PRK14280, PRK14280, chaperone protein DnaJ; Provis
7e-07 PRK14277 386
PRK14277, PRK14277, chaperone protein DnaJ; Provis
9e-07 TIGR03835 871
TIGR03835, termin_org_DnaJ, terminal organelle ass
1e-06 PRK14291 382
PRK14291, PRK14291, chaperone protein DnaJ; Provis
1e-06 PRK10767 371
PRK10767, PRK10767, chaperone protein DnaJ; Provis
3e-06 PRK10266 306
PRK10266, PRK10266, curved DNA-binding protein Cbp
6e-06 PTZ00037 421
PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov
6e-06 PRK14289 386
PRK14289, PRK14289, chaperone protein DnaJ; Provis
7e-06 PRK14283 378
PRK14283, PRK14283, chaperone protein DnaJ; Provis
1e-05 PRK14276 380
PRK14276, PRK14276, chaperone protein DnaJ; Provis
2e-05 PRK14297 380
PRK14297, PRK14297, chaperone protein DnaJ; Provis
2e-05 PRK14284 391
PRK14284, PRK14284, chaperone protein DnaJ; Provis
3e-05 PRK14281 397
PRK14281, PRK14281, chaperone protein DnaJ; Provis
3e-05 PRK14295 389
PRK14295, PRK14295, chaperone protein DnaJ; Provis
4e-05 PRK14287 371
PRK14287, PRK14287, chaperone protein DnaJ; Provis
4e-05 PRK14300 372
PRK14300, PRK14300, chaperone protein DnaJ; Provis
2e-04 PRK14285 365
PRK14285, PRK14285, chaperone protein DnaJ; Provis
2e-04 PRK14298 377
PRK14298, PRK14298, chaperone protein DnaJ; Provis
3e-04 PRK14294 366
PRK14294, PRK14294, chaperone protein DnaJ; Provis
3e-04 PRK14292 371
PRK14292, PRK14292, chaperone protein DnaJ; Provis
4e-04 PRK14278 378
PRK14278, PRK14278, chaperone protein DnaJ; Provis
5e-04 PRK14301 373
PRK14301, PRK14301, chaperone protein DnaJ; Provis
8e-04 PRK09430 267
PRK09430, djlA, Dna-J like membrane chaperone prot
8e-04 PRK14293 374
PRK14293, PRK14293, chaperone protein DnaJ; Provis
9e-04 PRK14290 365
PRK14290, PRK14290, chaperone protein DnaJ; Provis
0.001 PRK14286 372
PRK14286, PRK14286, chaperone protein DnaJ; Provis
0.001 PRK14288 369
PRK14288, PRK14288, chaperone protein DnaJ; Provis
0.004
>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain
Back Hide alignment and domain information
Score = 52.6 bits (127), Expect = 3e-11
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + A++ EIK AYR LA YHPD
Sbjct: 2 DYYEILGVPRDASLDEIKKAYRKLALKYHPD 32
>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain
Back Show alignment and domain information
Score = 51.8 bits (125), Expect = 7e-11
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + A+ EIK AYR LA YHPD
Sbjct: 2 YYEILGVPRDASDEEIKKAYRKLALKYHPD 31
DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63
>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain
Back Show alignment and domain information
Score = 50.6 bits (122), Expect = 2e-10
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y++L + P A+ EIK AYR LA YHPD
Sbjct: 3 YDILGVPPDASDEEIKKAYRKLALKYHPD 31
DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55
>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ
Back Show alignment and domain information
Score = 47.6 bits (114), Expect = 5e-08
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + A+ EIK AYR LAK YHPD
Sbjct: 3 YEILGVSKDASEEEIKKAYRKLAKKYHPD 31
This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354
>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Score = 47.1 bits (111), Expect = 6e-08
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + P A++ EIK AYR LA YHPD
Sbjct: 7 DYYEILGVPPNASLEEIKKAYRKLALKYHPD 37
>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Score = 47.2 bits (113), Expect = 8e-08
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + A+ EIK AYR LAK YHPD
Sbjct: 5 DYYEILGVSKDASEEEIKKAYRKLAKKYHPD 35
>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 46.9 bits (111), Expect = 1e-07
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL + TA+ EI+ AYR LAK YHPD
Sbjct: 7 YEVLGVSKTASEQEIRQAYRKLAKQYHPD 35
>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 44.3 bits (105), Expect = 7e-07
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL + +A+ EIK AYR L+K YHPD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPD 35
>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 44.0 bits (104), Expect = 9e-07
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L ++ AT EIK AYR LAK YHPD
Sbjct: 7 YYEILGVDRNATEEEIKKAYRRLAKKYHPD 36
>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ
Back Show alignment and domain information
Score = 44.0 bits (103), Expect = 1e-06
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL ++ A EIK A+R LAK YHPD
Sbjct: 5 YEVLGIDRDADEQEIKKAFRKLAKKYHPD 33
This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871
>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 44.0 bits (104), Expect = 1e-06
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPDF 42
YE+L + AT EIK AYR LA+ YHPDF
Sbjct: 6 YEILGVSRNATQEEIKKAYRRLARKYHPDF 35
>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 42.4 bits (101), Expect = 3e-06
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL + A+ EIK AYR LA YHPD
Sbjct: 7 YEVLGVSRNASEDEIKKAYRKLAMKYHPD 35
>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional
Back Show alignment and domain information
Score = 41.7 bits (98), Expect = 6e-06
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y ++ ++PT + IK AYR LA+ YHPD
Sbjct: 7 YAIMGVKPTDDLKTIKTAYRRLARKYHPD 35
>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional
Back Show alignment and domain information
Score = 41.7 bits (98), Expect = 6e-06
Identities = 18/30 (60%), Positives = 19/30 (63%)
Query: 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
LYEVL L T EIK AYR LA +HPD
Sbjct: 30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPD 59
>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 41.4 bits (97), Expect = 7e-06
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL + TAT+ EIK AYR A YHPD
Sbjct: 8 YEVLGVSKTATVDEIKKAYRKKAIQYHPD 36
>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 41.0 bits (96), Expect = 1e-05
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPDF------------VGAVYDMTLVSRRRTRTA 60
YEVL ++ A EIK AYR LA+ YHPD + Y + +R R
Sbjct: 8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYD 67
Query: 61 SFRCSGQSGF 70
F +G GF
Sbjct: 68 QFGHAGMDGF 77
>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 40.5 bits (95), Expect = 2e-05
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y+ L + A+ EIK AYR L+K YHPD
Sbjct: 6 YYDRLGVSKDASQDEIKKAYRKLSKKYHPD 35
>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 40.2 bits (94), Expect = 2e-05
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL LE A+ EIK A+R LA YHPD
Sbjct: 7 YEVLGLEKGASDDEIKKAFRKLAIKYHPD 35
>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 39.8 bits (93), Expect = 3e-05
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y +L + TA+ EIK AYR LA YHPD
Sbjct: 4 YTILGVSKTASPEEIKKAYRKLAVKYHPD 32
>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 39.8 bits (93), Expect = 3e-05
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL + +A EIK AYR LA YHPD
Sbjct: 6 YEVLGVSRSADKDEIKKAYRKLALKYHPD 34
>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 39.4 bits (92), Expect = 4e-05
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y+VL + AT EIK AYR LA+ YHPD
Sbjct: 12 YKVLGVPKDATEAEIKKAYRKLAREYHPD 40
>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 39.6 bits (92), Expect = 4e-05
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL ++ A++ E+K AYR LA+ YHPD
Sbjct: 7 YEVLGVDRNASVDEVKKAYRKLARKYHPD 35
>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 37.7 bits (87), Expect = 2e-04
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 24/84 (28%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPDF------------VGAVYDMTLVSRRRTRTA 60
Y++L + TA+ ++K AY LAK YHPD + A YD+ ++R
Sbjct: 6 YQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYD 65
Query: 61 SF----------RCSG--QSGFHP 72
F R G GFHP
Sbjct: 66 RFGHDAFQNQQSRGGGGNHGGFHP 89
>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 37.3 bits (86), Expect = 2e-04
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L L A+ EIK AYR +A YHPD
Sbjct: 6 YEILGLSKGASKDEIKKAYRKIAIKYHPD 34
>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 37.1 bits (86), Expect = 3e-04
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L L A++ +IK AYR LA YHPD
Sbjct: 8 YEILGLSKDASVEDIKKAYRKLAMKYHPD 36
>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 36.7 bits (85), Expect = 3e-04
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + A+ EIK +YR LA YHPD
Sbjct: 7 YEILGVTRDASEEEIKKSYRKLAMKYHPD 35
>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 36.8 bits (85), Expect = 4e-04
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + TA+ EIK AYR LA YHPD
Sbjct: 5 YELLGVSRTASADEIKSAYRKLALKYHPD 33
>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 36.2 bits (84), Expect = 5e-04
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y +L + A+ EIK AYR LA+ HPD
Sbjct: 6 YGLLGVSRNASDAEIKRAYRKLARELHPD 34
>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 35.9 bits (83), Expect = 8e-04
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YEVL + A+ EIK AYR LA YHPD
Sbjct: 7 YEVLGVSRDASEDEIKKAYRKLALQYHPD 35
>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional
Back Show alignment and domain information
Score = 35.6 bits (83), Expect = 8e-04
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y+VL + + EIK AYR L +HPD
Sbjct: 203 YKVLGVSESDDDQEIKRAYRKLMSEHHPD 231
>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 35.7 bits (83), Expect = 9e-04
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + A E+K AYR LA+ YHPD
Sbjct: 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPD 34
>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 35.7 bits (82), Expect = 0.001
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y++L ++ A+ +IK A+R LAK +HPD
Sbjct: 6 YKILGVDRNASQEDIKKAFRELAKKWHPD 34
>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 35.4 bits (81), Expect = 0.001
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
S Y++L + +A EIK AYR LA YHPD
Sbjct: 5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPD 35
>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Score = 33.9 bits (77), Expect = 0.004
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
S YE+L +E + IK +YR LA YHPD
Sbjct: 4 SYYEILEVEKHSNQETIKKSYRKLALKYHPD 34
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
ID Alignment Graph Length
Definition
Probability Query
82
COG0484 371
DnaJ DnaJ-class molecular chaperone with C-termina
99.73 KOG0713 336
consensus Molecular chaperone (DnaJ superfamily) [
99.63 PRK14288 369
chaperone protein DnaJ; Provisional
99.51 KOG0712 337
consensus Molecular chaperone (DnaJ superfamily) [
99.51 PRK14296 372
chaperone protein DnaJ; Provisional
99.49 PTZ00037 421
DnaJ_C chaperone protein; Provisional
99.47 PRK14279 392
chaperone protein DnaJ; Provisional
99.46 PRK14286 372
chaperone protein DnaJ; Provisional
99.46 PRK14294 366
chaperone protein DnaJ; Provisional
99.42 PRK14282 369
chaperone protein DnaJ; Provisional
99.42 PRK14283 378
chaperone protein DnaJ; Provisional
99.42 PRK14287 371
chaperone protein DnaJ; Provisional
99.41 PRK14276 380
chaperone protein DnaJ; Provisional
99.41 PRK14299 291
chaperone protein DnaJ; Provisional
99.41 PRK14295 389
chaperone protein DnaJ; Provisional
99.4 PRK14285 365
chaperone protein DnaJ; Provisional
99.4 PRK10767 371
chaperone protein DnaJ; Provisional
99.39 PRK14278 378
chaperone protein DnaJ; Provisional
99.39 PRK14291 382
chaperone protein DnaJ; Provisional
99.38 PRK14298 377
chaperone protein DnaJ; Provisional
99.38 PRK14301 373
chaperone protein DnaJ; Provisional
99.38 PRK14280 376
chaperone protein DnaJ; Provisional
99.38 PRK14277 386
chaperone protein DnaJ; Provisional
99.38 PF00226 64
DnaJ: DnaJ domain; InterPro: IPR001623 The prokary
99.38 KOG0719 264
consensus Molecular chaperone (DnaJ superfamily) [
99.37 PRK14284 391
chaperone protein DnaJ; Provisional
99.37 PRK14297 380
chaperone protein DnaJ; Provisional
99.37 KOG0715 288
consensus Molecular chaperone (DnaJ superfamily) [
99.36 cd06257 55
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho
99.36 PRK14281 397
chaperone protein DnaJ; Provisional
99.35 KOG0691 296
consensus Molecular chaperone (DnaJ superfamily) [
99.35 smart00271 60
DnaJ DnaJ molecular chaperone homology domain.
99.34 PRK10266 306
curved DNA-binding protein CbpA; Provisional
99.33 KOG0721 230
consensus Molecular chaperone (DnaJ superfamily) [
99.32 PRK14300 372
chaperone protein DnaJ; Provisional
99.32 PRK14289 386
chaperone protein DnaJ; Provisional
99.31 TIGR02349 354
DnaJ_bact chaperone protein DnaJ. This model repre
99.3 PRK14290 365
chaperone protein DnaJ; Provisional
99.29 PRK14293 374
chaperone protein DnaJ; Provisional
99.28 PRK14292 371
chaperone protein DnaJ; Provisional
99.27 KOG0624 504
consensus dsRNA-activated protein kinase inhibitor
99.23 KOG0717 508
consensus Molecular chaperone (DnaJ superfamily) [
99.23 KOG0716 279
consensus Molecular chaperone (DnaJ superfamily) [
99.23 PTZ00341 1136
Ring-infected erythrocyte surface antigen; Provisi
99.22 PTZ00100 116
DnaJ chaperone protein; Provisional
99.15 PHA03102 153
Small T antigen; Reviewed
99.11 COG2214 237
CbpA DnaJ-class molecular chaperone [Posttranslati
99.07 TIGR03835 871
termin_org_DnaJ terminal organelle assembly protei
99.05 PRK09430 267
djlA Dna-J like membrane chaperone protein; Provis
99.0 KOG0718 546
consensus Molecular chaperone (DnaJ superfamily) [
99.0 KOG0722 329
consensus Molecular chaperone (DnaJ superfamily) [
98.92 PRK01356 166
hscB co-chaperone HscB; Provisional
98.9 PRK05014 171
hscB co-chaperone HscB; Provisional
98.88 PRK03578 176
hscB co-chaperone HscB; Provisional
98.84 KOG0720 490
consensus Molecular chaperone (DnaJ superfamily) [
98.83 PRK00294 173
hscB co-chaperone HscB; Provisional
98.79 PHA02624 647
large T antigen; Provisional
98.71 KOG0550 486
consensus Molecular chaperone (DnaJ superfamily) [
98.61 KOG0714 306
consensus Molecular chaperone (DnaJ superfamily) [
98.58 COG5407 610
SEC63 Preprotein translocase subunit Sec63 [Intrac
98.54 KOG1150 250
consensus Predicted molecular chaperone (DnaJ supe
98.38 PRK01773 173
hscB co-chaperone HscB; Provisional
98.28 KOG1789 2235
consensus Endocytosis protein RME-8, contains DnaJ
97.87 KOG0723 112
consensus Molecular chaperone (DnaJ superfamily) [
97.5 KOG0568 342
consensus Molecular chaperone (DnaJ superfamily) [
97.48 COG5269 379
ZUO1 Ribosome-associated chaperone zuotin [Transla
97.44 TIGR00714 157
hscB Fe-S protein assembly co-chaperone HscB. This
97.37 COG1076 174
DjlA DnaJ-domain-containing proteins 1 [Posttransl
96.3 KOG0431 453
consensus Auxilin-like protein and related protein
95.51 PF03656 127
Pam16: Pam16; InterPro: IPR005341 The Pam16 protei
93.28 PF11833 194
DUF3353: Protein of unknown function (DUF3353); In
91.08 PF13446 62
RPT: A repeated domain in UCH-protein
89.19
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Back Hide alignment and domain information
Probab=99.73 E-value=5.8e-18 Score=126.04 Aligned_cols=47 Identities=43% Similarity=0.524 Sum_probs=44.0
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc-------------------------hHHHhhhcccc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV-------------------------GAVYDMTLVSR 54 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~-------------------------r~~yD~~~~~~ 54 (82)
..+|||+||||+++|+.+|||+|||+||++||||+| |++||+++...
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~ 73 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAG 73 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccc
Confidence 458999999999999999999999999999999999 99999988664
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.63 E-value=2.1e-16 Score=116.18 Aligned_cols=47 Identities=40% Similarity=0.485 Sum_probs=44.0
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc-------------------------hHHHhhhccc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV-------------------------GAVYDMTLVS 53 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~-------------------------r~~yD~~~~~ 53 (82)
...+|||+||||+++|+..|||+|||+||+++||||| |+.||..+..
T Consensus 13 ~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEe 84 (336)
T KOG0713|consen 13 LAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEE 84 (336)
T ss_pred hcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHh
Confidence 4569999999999999999999999999999999999 9999998854
>PRK14288 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.51 E-value=1.1e-14 Score=108.19 Aligned_cols=35 Identities=43% Similarity=0.572 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||++
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~ 36 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRN 36 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 47999999999999999999999999999999998
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.51 E-value=1.7e-14 Score=106.45 Aligned_cols=46 Identities=41% Similarity=0.590 Sum_probs=43.1
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc----------------------hHHHhhhccc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV----------------------GAVYDMTLVS 53 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~----------------------r~~yD~~~~~ 53 (82)
....||+||||+++|+.+|||+|||+||++|||||| |+.||+.+..
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~ekr~~yD~~g~~ 69 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDPEKREIYDQYGEE 69 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHHhhhhh
Confidence 357899999999999999999999999999999999 9999998865
>PRK14296 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.49 E-value=2.4e-14 Score=106.50 Aligned_cols=44 Identities=45% Similarity=0.591 Sum_probs=41.4
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhcc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLV 52 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~ 52 (82)
..|||+||||+++|+.+|||+|||+||++||||+| |+.||+.+.
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~ 70 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGH 70 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccc
Confidence 47999999999999999999999999999999998 999998764
>PTZ00037 DnaJ_C chaperone protein; Provisional
Back Show alignment and domain information
Probab=99.47 E-value=3.6e-14 Score=107.22 Aligned_cols=45 Identities=44% Similarity=0.499 Sum_probs=41.8
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc---------------------hHHHhhhcc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV---------------------GAVYDMTLV 52 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~---------------------r~~yD~~~~ 52 (82)
...|||+||||+++|+.+|||+|||+||++||||++ |+.||+.+.
T Consensus 26 ~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~~kR~~YD~~G~ 91 (421)
T PTZ00037 26 DNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDPEKRKIYDEYGE 91 (421)
T ss_pred cchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccHHHHHHHhhhcc
Confidence 468999999999999999999999999999999998 899998764
>PRK14279 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.46 E-value=4.5e-14 Score=105.60 Aligned_cols=36 Identities=39% Similarity=0.545 Sum_probs=34.5
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+||||+++|+.+|||+|||+||++||||++
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~ 42 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDAN 42 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 358999999999999999999999999999999998
>PRK14286 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.46 E-value=5.8e-14 Score=104.36 Aligned_cols=35 Identities=46% Similarity=0.608 Sum_probs=33.9
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~ 37 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKN 37 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 47999999999999999999999999999999997
>PRK14294 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.42 E-value=1.5e-13 Score=101.87 Aligned_cols=35 Identities=43% Similarity=0.593 Sum_probs=34.0
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||++
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~ 37 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRN 37 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 47999999999999999999999999999999998
>PRK14282 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.42 E-value=1.6e-13 Score=101.79 Aligned_cols=35 Identities=43% Similarity=0.591 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||++
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~ 37 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRH 37 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 47999999999999999999999999999999997
>PRK14283 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.42 E-value=1.6e-13 Score=102.05 Aligned_cols=35 Identities=49% Similarity=0.719 Sum_probs=34.0
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||+|
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~ 38 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS 38 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 58999999999999999999999999999999997
>PRK14287 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.41 E-value=1.7e-13 Score=101.87 Aligned_cols=44 Identities=43% Similarity=0.609 Sum_probs=41.2
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhcc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLV 52 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~ 52 (82)
..|||+||||+++|+.+|||+|||+||+++|||+| |+.||+.+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~ 70 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH 70 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCC
Confidence 47999999999999999999999999999999998 999998764
>PRK14276 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.41 E-value=1.7e-13 Score=102.03 Aligned_cols=44 Identities=41% Similarity=0.554 Sum_probs=41.2
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhcc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLV 52 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~ 52 (82)
..|||+||||+++|+.+|||+|||+||++||||++ |+.||+.+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~ 70 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGA 70 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCC
Confidence 47999999999999999999999999999999997 999998764
>PRK14299 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.41 E-value=2e-13 Score=98.64 Aligned_cols=35 Identities=37% Similarity=0.568 Sum_probs=33.9
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+|++++|||++
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~ 37 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVN 37 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 47999999999999999999999999999999998
>PRK14295 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.40 E-value=2.8e-13 Score=101.32 Aligned_cols=36 Identities=47% Similarity=0.633 Sum_probs=34.3
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+||||+++|+.+|||+|||+||++||||++
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~ 42 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDAN 42 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcC
Confidence 357999999999999999999999999999999997
>PRK14285 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.40 E-value=2.3e-13 Score=100.95 Aligned_cols=34 Identities=47% Similarity=0.625 Sum_probs=33.4
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+|+++||||++
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~ 36 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKN 36 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 7999999999999999999999999999999998
>PRK10767 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.39 E-value=2.9e-13 Score=100.34 Aligned_cols=35 Identities=49% Similarity=0.604 Sum_probs=33.9
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||+++|||++
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~ 37 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRN 37 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 47999999999999999999999999999999997
>PRK14278 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.39 E-value=3.5e-13 Score=100.38 Aligned_cols=34 Identities=41% Similarity=0.582 Sum_probs=33.4
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+||+++|||++
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~ 36 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVN 36 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 7999999999999999999999999999999998
>PRK14291 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=3.3e-13 Score=100.55 Aligned_cols=35 Identities=51% Similarity=0.762 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.++||+|||+||++||||+|
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~ 36 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFN 36 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 37999999999999999999999999999999998
>PRK14298 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=2.8e-13 Score=100.91 Aligned_cols=35 Identities=46% Similarity=0.677 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||+++|||++
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~ 38 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKN 38 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCcccc
Confidence 47999999999999999999999999999999998
>PRK14301 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=3.2e-13 Score=100.42 Aligned_cols=35 Identities=49% Similarity=0.596 Sum_probs=33.9
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.++||+|||+||+++|||++
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~ 37 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRN 37 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcC
Confidence 47999999999999999999999999999999998
>PRK14280 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=4.1e-13 Score=99.91 Aligned_cols=44 Identities=45% Similarity=0.573 Sum_probs=41.2
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhcc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLV 52 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~ 52 (82)
..|||+||||+++|+.+|||+|||+|++++|||++ |+.||+.+.
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~ 70 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGH 70 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCc
Confidence 37999999999999999999999999999999997 999998764
>PRK14277 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.38 E-value=4.2e-13 Score=100.14 Aligned_cols=35 Identities=51% Similarity=0.735 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||++
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~ 38 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN 38 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcC
Confidence 47999999999999999999999999999999997
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []
Back Show alignment and domain information
Probab=99.38 E-value=3.5e-13 Score=77.03 Aligned_cols=33 Identities=55% Similarity=0.768 Sum_probs=32.0
Q ss_pred CccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 11 d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
|||+||||+++++.++|+++|+++++++|||++
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~ 33 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKN 33 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTG
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccc
Confidence 589999999999999999999999999999996
Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.37 E-value=3.6e-13 Score=95.62 Aligned_cols=43 Identities=42% Similarity=0.396 Sum_probs=38.9
Q ss_pred CCCCCCCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 1 MPVTVPGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 1 m~~~~~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
|+++-+....|+|+||||..+|+.++|++||++|++++|||++
T Consensus 5 ~~~~~~f~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~ 47 (264)
T KOG0719|consen 5 EECTGSFNKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKN 47 (264)
T ss_pred hhccccccccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcc
Confidence 4455566678999999999999999999999999999999999
>PRK14284 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.37 E-value=4.1e-13 Score=100.33 Aligned_cols=34 Identities=47% Similarity=0.600 Sum_probs=32.9
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+||+++|||++
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~ 34 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKN 34 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4899999999999999999999999999999997
>PRK14297 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.37 E-value=3.8e-13 Score=100.14 Aligned_cols=35 Identities=51% Similarity=0.615 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||++||||++
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~ 37 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKN 37 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 37999999999999999999999999999999998
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.36 E-value=6.6e-13 Score=96.25 Aligned_cols=45 Identities=42% Similarity=0.623 Sum_probs=42.0
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhcccc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLVSR 54 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~~~ 54 (82)
.|||+||||+++|+..|||.||++|++++|||.| |+.||..+...
T Consensus 43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 4999999999999999999999999999999999 99999888654
>cd06257 DnaJ DnaJ domain or J-domain
Back Show alignment and domain information
Probab=99.36 E-value=6.7e-13 Score=73.41 Aligned_cols=33 Identities=48% Similarity=0.716 Sum_probs=32.2
Q ss_pred CccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 11 d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
|||+||||+++++.++|+++|+++++++|||++
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~ 33 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKN 33 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 699999999999999999999999999999987
DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
>PRK14281 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.35 E-value=6.1e-13 Score=99.64 Aligned_cols=34 Identities=50% Similarity=0.626 Sum_probs=33.4
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+|++++|||++
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~ 36 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKN 36 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcC
Confidence 6999999999999999999999999999999998
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.35 E-value=6.2e-13 Score=96.88 Aligned_cols=46 Identities=41% Similarity=0.490 Sum_probs=43.4
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc-------------------------hHHHhhhcccc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV-------------------------GAVYDMTLVSR 54 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~-------------------------r~~yD~~~~~~ 54 (82)
..|||.||||+.+++.++|++||+..++++||||| |.+||..+...
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~ 74 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSG 74 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhc
Confidence 78999999999999999999999999999999999 99999988653
>smart00271 DnaJ DnaJ molecular chaperone homology domain
Back Show alignment and domain information
Probab=99.34 E-value=9.6e-13 Score=74.02 Aligned_cols=34 Identities=47% Similarity=0.663 Sum_probs=32.8
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++++.++|+++|+++++++|||++
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~ 34 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKN 34 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 4899999999999999999999999999999997
>PRK10266 curved DNA-binding protein CbpA; Provisional
Back Show alignment and domain information
Probab=99.33 E-value=1.2e-12 Score=95.01 Aligned_cols=34 Identities=41% Similarity=0.778 Sum_probs=33.3
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+||+++|||++
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~ 37 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVS 37 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 6999999999999999999999999999999988
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.32 E-value=1.4e-12 Score=91.63 Aligned_cols=36 Identities=47% Similarity=0.634 Sum_probs=33.9
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..-|+||||||+++++..|||+|||+|++++||||+
T Consensus 97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~ 132 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQ 132 (230)
T ss_pred hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcC
Confidence 346999999999999999999999999999999995
>PRK14300 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.32 E-value=1.4e-12 Score=97.02 Aligned_cols=34 Identities=41% Similarity=0.659 Sum_probs=33.2
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+|++++|||++
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~ 36 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTT 36 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 6999999999999999999999999999999987
>PRK14289 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.31 E-value=1.6e-12 Score=96.84 Aligned_cols=35 Identities=51% Similarity=0.627 Sum_probs=34.0
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++|+.+|||+|||+||+++|||++
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~ 38 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKN 38 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 47999999999999999999999999999999998
>TIGR02349 DnaJ_bact chaperone protein DnaJ
Back Show alignment and domain information
Probab=99.30 E-value=1.9e-12 Score=95.34 Aligned_cols=33 Identities=52% Similarity=0.715 Sum_probs=32.4
Q ss_pred CccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 11 d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
|||+||||+++|+.++||+|||+|++++|||++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~ 33 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRN 33 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 799999999999999999999999999999998
This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
>PRK14290 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.29 E-value=2.1e-12 Score=95.76 Aligned_cols=34 Identities=38% Similarity=0.677 Sum_probs=33.3
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+|++++|||++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~ 36 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLH 36 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 6999999999999999999999999999999998
>PRK14293 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.28 E-value=3.7e-12 Score=94.70 Aligned_cols=34 Identities=44% Similarity=0.685 Sum_probs=33.3
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.+|||+|||+|++++|||++
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~ 36 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVN 36 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 6999999999999999999999999999999998
>PRK14292 chaperone protein DnaJ; Provisional
Back Show alignment and domain information
Probab=99.27 E-value=3.1e-12 Score=94.85 Aligned_cols=34 Identities=50% Similarity=0.624 Sum_probs=33.2
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.++||+|||+|++++|||++
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~ 35 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRN 35 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 4899999999999999999999999999999999
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Back Show alignment and domain information
Probab=99.23 E-value=8.1e-12 Score=93.77 Aligned_cols=36 Identities=36% Similarity=0.576 Sum_probs=34.0
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..+|||+||||.++|+..||.+|||++|.++|||..
T Consensus 392 ~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNF 427 (504)
T KOG0624|consen 392 GKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNF 427 (504)
T ss_pred ccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccc
Confidence 458999999999999999999999999999999966
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.23 E-value=5.2e-12 Score=96.33 Aligned_cols=38 Identities=47% Similarity=0.549 Sum_probs=35.6
Q ss_pred CCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 6 PGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 6 ~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
+...+.||+||||..+|+..+||++||+|||++|||+|
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDkn 41 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKN 41 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCC
Confidence 44568999999999999999999999999999999997
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.23 E-value=5.2e-12 Score=90.99 Aligned_cols=36 Identities=56% Similarity=0.623 Sum_probs=34.1
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|+|+||||+++|+.++|||+||+|++++|||++
T Consensus 29 ~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~ 64 (279)
T KOG0716|consen 29 IRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKN 64 (279)
T ss_pred chhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcC
Confidence 356899999999999999999999999999999999
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Back Show alignment and domain information
Probab=99.22 E-value=1.1e-11 Score=101.21 Aligned_cols=48 Identities=23% Similarity=0.259 Sum_probs=43.3
Q ss_pred CCCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhccc
Q 045017 6 PGTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLVS 53 (82)
Q Consensus 6 ~~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~~ 53 (82)
...+.+||+||||+++|+..+||+|||+||+++|||++ |+.||..+..
T Consensus 569 ~~~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~ 640 (1136)
T PTZ00341 569 EIPDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYD 640 (1136)
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhcccc
Confidence 34568999999999999999999999999999999998 8899987654
>PTZ00100 DnaJ chaperone protein; Provisional
Back Show alignment and domain information
Probab=99.15 E-value=3.8e-11 Score=77.35 Aligned_cols=37 Identities=30% Similarity=0.386 Sum_probs=34.3
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
+...++|+||||+++++.+||+++||+|++++|||+.
T Consensus 62 Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg 98 (116)
T PTZ00100 62 MSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNG 98 (116)
T ss_pred CCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 3457999999999999999999999999999999986
>PHA03102 Small T antigen; Reviewed
Back Show alignment and domain information
Probab=99.11 E-value=5.3e-11 Score=79.79 Aligned_cols=34 Identities=26% Similarity=0.373 Sum_probs=32.6
Q ss_pred cCccceeccCCCC--CHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..+|+||||+++| +.++||+|||++++++|||++
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkg 40 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKG 40 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 5689999999999 999999999999999999998
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.07 E-value=8.9e-11 Score=77.80 Aligned_cols=37 Identities=46% Similarity=0.636 Sum_probs=34.8
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....+||+||||+++|+..||+++||++++++|||++
T Consensus 3 ~~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~ 39 (237)
T COG2214 3 SDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRN 39 (237)
T ss_pred hhhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 3457999999999999999999999999999999998
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ
Back Show alignment and domain information
Probab=99.05 E-value=2e-10 Score=92.20 Aligned_cols=34 Identities=50% Similarity=0.689 Sum_probs=33.1
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||+++|+.++||++||+|++++|||++
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn 35 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN 35 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 6999999999999999999999999999999997
This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Back Show alignment and domain information
Probab=99.00 E-value=2.3e-10 Score=82.17 Aligned_cols=37 Identities=38% Similarity=0.433 Sum_probs=34.3
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....++|+||||+++++.++||++||+|+++||||++
T Consensus 197 ~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~ 233 (267)
T PRK09430 197 PTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKL 233 (267)
T ss_pred CcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCC
Confidence 3447999999999999999999999999999999994
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=99.00 E-value=2.5e-10 Score=87.51 Aligned_cols=37 Identities=43% Similarity=0.554 Sum_probs=34.7
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..+.|||.+|+|+++|+.+||++|||++++.|||||.
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh 42 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKH 42 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCccc
Confidence 3456999999999999999999999999999999998
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.92 E-value=5.7e-10 Score=80.68 Aligned_cols=37 Identities=38% Similarity=0.461 Sum_probs=34.9
Q ss_pred CCccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 7 GTGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 7 ~~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
....|.|+||||.+.++..||.+|||+||++||||++
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~ 66 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRN 66 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCccc
Confidence 3557999999999999999999999999999999999
>PRK01356 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=98.90 E-value=1.6e-09 Score=73.19 Aligned_cols=34 Identities=21% Similarity=0.414 Sum_probs=32.0
Q ss_pred cCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||++|||++. ++..+|+++|+++++++|||++
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~ 37 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKA 37 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 589999999986 7899999999999999999996
>PRK05014 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=98.88 E-value=2.1e-09 Score=72.93 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=31.4
Q ss_pred cCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||+||||++. ++..+|+++|+++++++|||+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~ 36 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKF 36 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCC
Confidence 389999999996 7889999999999999999985
>PRK03578 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=98.84 E-value=4.3e-09 Score=71.76 Aligned_cols=35 Identities=20% Similarity=0.354 Sum_probs=32.4
Q ss_pred ccCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||++. ++..+|+++|+++++++|||++
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~ 41 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRF 41 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 3799999999985 6899999999999999999987
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.83 E-value=1.9e-09 Score=82.42 Aligned_cols=35 Identities=29% Similarity=0.329 Sum_probs=34.3
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|+|.+|||+++++.++||+.||++|...|||||
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn 268 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKN 268 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCcc
Confidence 68999999999999999999999999999999999
>PRK00294 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=98.79 E-value=8.4e-09 Score=70.24 Aligned_cols=36 Identities=25% Similarity=0.485 Sum_probs=33.1
Q ss_pred CccCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...+||++|||++. .+..+|+++|+++++++|||+.
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~ 39 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRF 39 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 45899999999996 6789999999999999999996
>PHA02624 large T antigen; Provisional
Back Show alignment and domain information
Probab=98.71 E-value=9e-09 Score=81.31 Aligned_cols=43 Identities=28% Similarity=0.398 Sum_probs=38.0
Q ss_pred ccCccceeccCCCC--CHHHHHHHHHHHHHHhCCCCc---------hHHHhhhc
Q 045017 9 GGSLYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFV---------GAVYDMTL 51 (82)
Q Consensus 9 ~~d~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~---------r~~yD~~~ 51 (82)
..++|++|||+++| +.++||+|||++++++|||+. ..+|+...
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~ 63 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQ 63 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHh
Confidence 46899999999999 999999999999999999997 55665554
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.61 E-value=1.6e-08 Score=77.09 Aligned_cols=35 Identities=43% Similarity=0.517 Sum_probs=33.9
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
-.|||+||||..+++..|||++||++++.+|||++
T Consensus 372 Rkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ 406 (486)
T KOG0550|consen 372 RKDWYKILGISRNASDDEIKKAYRKLALVHHPDKN 406 (486)
T ss_pred hhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcC
Confidence 46999999999999999999999999999999999
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.58 E-value=3.4e-08 Score=68.38 Aligned_cols=35 Identities=43% Similarity=0.663 Sum_probs=33.4
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|+|+||+|.+.|+..+|++||+++++++|||++
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~ 36 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKN 36 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCC
Confidence 47999999999999999999999999999999997
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Back Show alignment and domain information
Probab=98.54 E-value=3.2e-08 Score=76.22 Aligned_cols=35 Identities=34% Similarity=0.580 Sum_probs=33.5
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.-|+||||||+.+++..+||++||+|+.|+||||.
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~ 131 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKA 131 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhc
Confidence 35999999999999999999999999999999998
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=98.38 E-value=1.8e-07 Score=65.74 Aligned_cols=35 Identities=37% Similarity=0.555 Sum_probs=33.7
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.-++|+||.|.|..+.++||+.||+|++..|||+|
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN 86 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKN 86 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCC
Confidence 36899999999999999999999999999999999
>PRK01773 hscB co-chaperone HscB; Provisional
Back Show alignment and domain information
Probab=98.28 E-value=9.6e-07 Score=60.17 Aligned_cols=34 Identities=21% Similarity=0.292 Sum_probs=32.1
Q ss_pred cCccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.|||++|||++. .+...|++.|+++.+++|||+.
T Consensus 2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f 37 (173)
T PRK01773 2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNF 37 (173)
T ss_pred CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcc
Confidence 689999999985 8999999999999999999987
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.87 E-value=1.3e-05 Score=67.41 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=34.7
Q ss_pred CCccCccceeccCC----CCCHHHHHHHHHHHHHHhCCCCc---hHHHhh
Q 045017 7 GTGGSLYEVLRLEP----TATILEIKMAYRSLAKVYHPDFV---GAVYDM 49 (82)
Q Consensus 7 ~~~~d~y~iLgv~~----~a~~~~Ik~ayr~l~~~~HPDk~---r~~yD~ 49 (82)
++..+.|+||.|+- ....++||++|++||.+|||||| |..|..
T Consensus 1278 mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemFe~ 1327 (2235)
T KOG1789|consen 1278 MSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMFER 1327 (2235)
T ss_pred cchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHHHH
Confidence 45578899999984 45568999999999999999999 555443
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.50 E-value=0.00016 Score=46.13 Aligned_cols=30 Identities=30% Similarity=0.317 Sum_probs=29.0
Q ss_pred ceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 14 EVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 14 ~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.||||.+.++.+.||.++|++.+..|||+.
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~G 89 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRG 89 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCC
Confidence 499999999999999999999999999998
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.48 E-value=7e-05 Score=54.13 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=32.4
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..+|.||||..+++..+++.+|..|++++|||..
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsg 80 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSG 80 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCC
Confidence 4689999999999999999999999999999987
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=97.44 E-value=6.3e-05 Score=55.36 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=32.3
Q ss_pred ccCccceeccCC---CCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEP---TATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~---~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|+|.+|||+. .++...|.++.++.+.+||||+.
T Consensus 42 ~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~ 79 (379)
T COG5269 42 KVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKT 79 (379)
T ss_pred hhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccch
Confidence 479999999995 78899999999999999999998
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB
Back Show alignment and domain information
Probab=97.37 E-value=0.00026 Score=47.37 Aligned_cols=23 Identities=26% Similarity=0.572 Sum_probs=20.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCc
Q 045017 21 TATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 21 ~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..+..+|+++|+++++++|||+.
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~ 24 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKF 24 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCC
Confidence 35788999999999999999984
This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Back Show alignment and domain information
Probab=96.30 E-value=0.0014 Score=44.35 Aligned_cols=34 Identities=38% Similarity=0.400 Sum_probs=32.5
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.+.|++||+...++..+|+++|+++..++|||+-
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a 146 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKA 146 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHH
Confidence 6889999999999999999999999999999976
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Back Show alignment and domain information
Probab=95.51 E-value=0.0077 Score=46.49 Aligned_cols=26 Identities=35% Similarity=0.447 Sum_probs=22.9
Q ss_pred cCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 18 LEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 18 v~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
+..-.+.+.||++||+.+|..||||.
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKl 421 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKL 421 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccc
Confidence 34456889999999999999999998
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []
Back Show alignment and domain information
Probab=93.28 E-value=0.084 Score=34.48 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=25.7
Q ss_pred CccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 11 SLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 11 d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.-.+||+|++..+.++|.+.|..|-...+|++.
T Consensus 59 EA~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG 91 (127)
T PF03656_consen 59 EARQILNVKEELSREEIQKRYKHLFKANDPSKG 91 (127)
T ss_dssp HHHHHHT--G--SHHHHHHHHHHHHHHT-CCCT
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHhccCCCcC
Confidence 446799999999999999999999999999988
In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised
Back Show alignment and domain information
Probab=91.08 E-value=0.26 Score=34.16 Aligned_cols=35 Identities=31% Similarity=0.335 Sum_probs=30.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCc-----hHHHhhhccc
Q 045017 19 EPTATILEIKMAYRSLAKVYHPDFV-----GAVYDMTLVS 53 (82)
Q Consensus 19 ~~~a~~~~Ik~ayr~l~~~~HPDk~-----r~~yD~~~~~ 53 (82)
+++|+.+||+.|+.++..+|--|.. -.+||..+..
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDEKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999977766 7889987755
This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
>PF13446 RPT: A repeated domain in UCH-protein
Back Show alignment and domain information
Probab=89.19 E-value=0.41 Score=26.85 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=26.5
Q ss_pred cCccceeccCCCCCHHHHHHHHHHHHHHhCCC
Q 045017 10 GSLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41 (82)
Q Consensus 10 ~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD 41 (82)
.+.|++|||+++.+...|..+|+.... -.|+
T Consensus 5 ~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~-~~P~ 35 (62)
T PF13446_consen 5 EEAYEILGIDEDTDDDFIISAFQSKVN-DDPS 35 (62)
T ss_pred HHHHHHhCcCCCCCHHHHHHHHHHHHH-cChH
Confidence 567999999999999999999998876 4454
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
E-value Query 82
d1fafa_ 79
a.2.3.1 (A:) Large T antigen, the N-terminal J dom
5e-07 d1wjza_ 94
a.2.3.1 (A:) CSL-type zinc finger-containing prote
4e-06 d1fpoa1 76
a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma
9e-06 d1nz6a_ 98
a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T
1e-05 d1xbla_ 75
a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain
1e-05 d1iura_ 88
a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human
2e-05 d1gh6a_ 114
a.2.3.1 (A:) Large T antigen, the N-terminal J dom
2e-05 d1hdja_ 77
a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9
0.002
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79
Back Hide information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]
Score = 41.1 bits (96), Expect = 5e-07
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 11 SLYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFVGAVYDMTLVSR 54
L E+L+L ++ AY+ + + HPD G+ M ++
Sbjct: 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNS 57
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.9 bits (90), Expect = 4e-06
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y +L +P+A + ++K Y+ L +YHPD
Sbjct: 19 YSILGADPSANMSDLKQKYQKLILLYHPD 47
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]
Score = 37.7 bits (87), Expect = 9e-06
Identities = 6/31 (19%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 13 YEVLRLEPTATI--LEIKMAYRSLAKVYHPD 41
+ + L + + + ++ L + YHPD
Sbjct: 4 FTLFGLPARYQLDTQALSLRFQDLQRQYHPD 34
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]
Score = 38.0 bits (88), Expect = 1e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
G + ++ + + T ++K YR V HPD
Sbjct: 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 64
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]
Score = 36.9 bits (85), Expect = 1e-05
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPD 41
YE+L + TA EI+ AY+ LA YHPD
Sbjct: 5 YYEILGVSKTAEEREIRKAYKRLAMKYHPD 34
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 2e-05
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 12 LYEVLRLEPTATILEIKMAYRSLAKVYHPDF 42
+ V+ E K R L +HPD
Sbjct: 18 VTSVVEQAWKLPESERKKIIRRLYLKWHPDK 48
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]
Score = 37.9 bits (87), Expect = 2e-05
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 12 LYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFVGAVYDMTLVSRRR 56
L ++L LE +A I ++ AY K +HPD G M ++
Sbjct: 10 LMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLY 56
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]
Score = 31.6 bits (71), Expect = 0.002
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 13 YEVLRLEPTATILEIKMAYRSLAKVYHPD 41
Y+ L L A+ EIK AYR A YHPD
Sbjct: 6 YQTLGLARGASDEEIKRAYRRQALRYHPD 34
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
ID Alignment Graph Length
Definition
Probability Query 82
d1xbla_ 75
DnaJ chaperone, N-terminal (J) domain {Escherichia
99.64 d1hdja_ 77
HSP40 {Human (Homo sapiens) [TaxId: 9606]}
99.58 d1wjza_ 94
CSL-type zinc finger-containing protein 3 (J-domai
99.55 d1gh6a_ 114
Large T antigen, the N-terminal J domain {Simian v
99.5 d1iura_ 88
Hypothetical protein KIAA0730 {Human (Homo sapiens
99.33 d1fafa_ 79
Large T antigen, the N-terminal J domain {Murine p
99.32 d1fpoa1 76
HSC20 (HSCB), N-terminal (J) domain {Escherichia c
99.29 d1nz6a_ 98
Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
99.07
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Back Hide information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=8.7e-17 Score=93.65 Aligned_cols=35 Identities=43% Similarity=0.598 Sum_probs=33.8
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
.+|||+||||+++|+.++||+||+++++++|||++
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~ 36 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRN 36 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTC
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhcc
Confidence 47999999999999999999999999999999998
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=7.3e-16 Score=89.91 Aligned_cols=45 Identities=38% Similarity=0.454 Sum_probs=41.5
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc------------------------hHHHhhhccc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV------------------------GAVYDMTLVS 53 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~------------------------r~~yD~~~~~ 53 (82)
.+|||+||||+++|+.++|++||+++++++|||++ |+.||+.+..
T Consensus 2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~ 70 (77)
T d1hdja_ 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEE 70 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGG
T ss_pred CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhh
Confidence 47999999999999999999999999999999998 8999987654
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.55 E-value=4.3e-16 Score=94.19 Aligned_cols=36 Identities=31% Similarity=0.604 Sum_probs=34.2
Q ss_pred CccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 8 TGGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
...|||+||||+++++.++||++|++|++++|||++
T Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~ 49 (94)
T d1wjza_ 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQ 49 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTC
T ss_pred hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhc
Confidence 347999999999999999999999999999999987
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]
Probab=99.50 E-value=1e-15 Score=95.01 Aligned_cols=35 Identities=34% Similarity=0.438 Sum_probs=33.1
Q ss_pred ccCccceeccCCCC--CHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..|||+||||+++| +.++||+|||+||+++|||++
T Consensus 7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~ 43 (114)
T d1gh6a_ 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG 43 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccch
Confidence 46899999999998 788999999999999999999
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.3e-13 Score=82.55 Aligned_cols=35 Identities=23% Similarity=0.087 Sum_probs=33.7
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
-.++|+||||+.+++.+|||+||++|++++|||++
T Consensus 15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~ 49 (88)
T d1iura_ 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKN 49 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccc
Confidence 36999999999999999999999999999999998
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]
Probab=99.32 E-value=1.4e-13 Score=80.93 Aligned_cols=44 Identities=20% Similarity=0.320 Sum_probs=38.6
Q ss_pred CccCccceeccCCCC--CHHHHHHHHHHHHHHhCCCCc---------hHHHhhhc
Q 045017 8 TGGSLYEVLRLEPTA--TILEIKMAYRSLAKVYHPDFV---------GAVYDMTL 51 (82)
Q Consensus 8 ~~~d~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPDk~---------r~~yD~~~ 51 (82)
...++|+||||++++ +.++||+||+++++++|||++ ..+|+.+.
T Consensus 9 ~~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~e~~~~in~Ay~~L~ 63 (79)
T d1fafa_ 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFK 63 (79)
T ss_dssp HHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHC
Confidence 447999999999987 999999999999999999998 66676554
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]
Probab=99.29 E-value=4.2e-13 Score=77.60 Aligned_cols=33 Identities=18% Similarity=0.492 Sum_probs=30.6
Q ss_pred CccceeccCCC--CCHHHHHHHHHHHHHHhCCCCc
Q 045017 11 SLYEVLRLEPT--ATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 11 d~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
|||+||||++. ++.++|+++|+++++++|||+.
T Consensus 2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~ 36 (76)
T d1fpoa1 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKF 36 (76)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGG
T ss_pred ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcccc
Confidence 79999999985 5589999999999999999987
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Back Show information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.07 E-value=2.4e-11 Score=73.50 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=33.0
Q ss_pred ccCccceeccCCCCCHHHHHHHHHHHHHHhCCCCc
Q 045017 9 GGSLYEVLRLEPTATILEIKMAYRSLAKVYHPDFV 43 (82)
Q Consensus 9 ~~d~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPDk~ 43 (82)
..+.|++|||...++.++||+||+++++++|||++
T Consensus 32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~ 66 (98)
T d1nz6a_ 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKA 66 (98)
T ss_dssp TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHH
T ss_pred cccCCeecCCCccCCHHHHHHHHHHHHHHhccccC
Confidence 45789999999999999999999999999999987
