Citrus Sinensis ID: 045022
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 77 | ||||||
| 357129326 | 121 | PREDICTED: glucan endo-1,3-beta-glucosid | 0.844 | 0.537 | 0.538 | 3e-14 | |
| 115435616 | 121 | Os01g0243700 [Oryza sativa Japonica Grou | 0.818 | 0.520 | 0.523 | 3e-13 | |
| 11994570 | 154 | beta-1,3-glucanase-like protein [Arabido | 0.818 | 0.409 | 0.523 | 4e-12 | |
| 224100991 | 454 | predicted protein [Populus trichocarpa] | 0.753 | 0.127 | 0.542 | 4e-12 | |
| 222616446 | 842 | hypothetical protein OsJ_34867 [Oryza sa | 0.805 | 0.073 | 0.5 | 7e-12 | |
| 255557383 | 216 | hypothetical protein RCOM_0633850 [Ricin | 0.792 | 0.282 | 0.492 | 8e-12 | |
| 62733240 | 510 | glucan endo-1,3-beta-glucosidase precurs | 0.805 | 0.121 | 0.5 | 1e-11 | |
| 62733152 | 431 | glucan endo-1,3-beta-glucosidase precurs | 0.805 | 0.143 | 0.5 | 1e-11 | |
| 255557345 | 125 | hydrolase, hydrolyzing O-glycosyl compou | 0.805 | 0.496 | 0.476 | 2e-11 | |
| 297612468 | 472 | Os11g0704600 [Oryza sativa Japonica Grou | 0.805 | 0.131 | 0.5 | 2e-11 |
| >gi|357129326|ref|XP_003566315.1| PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 11 EGQTTWCIVKPSTGDERLIANIQYCCDHVDCSIIQPGGACYEPNNNYSHASVVMHLFYRA 70
E Q TWC+ KPS ++ LIANI Y C +V CS+IQPGG CY+P+N SHA+V M+L+Y
Sbjct: 33 EAQKTWCVAKPSADEKALIANINYACGNVSCSVIQPGGPCYKPDNPVSHAAVAMNLYYAT 92
Query: 71 NNKLP 75
+ P
Sbjct: 93 YGRHP 97
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115435616|ref|NP_001042566.1| Os01g0243700 [Oryza sativa Japonica Group] gi|56784550|dbj|BAD81597.1| putative beta-1,3-glucanase [Oryza sativa Japonica Group] gi|56784589|dbj|BAD81636.1| putative beta-1,3-glucanase [Oryza sativa Japonica Group] gi|113532097|dbj|BAF04480.1| Os01g0243700 [Oryza sativa Japonica Group] gi|215734872|dbj|BAG95594.1| unnamed protein product [Oryza sativa Japonica Group] gi|215765379|dbj|BAG87076.1| unnamed protein product [Oryza sativa Japonica Group] gi|218187867|gb|EEC70294.1| hypothetical protein OsI_01131 [Oryza sativa Indica Group] gi|222618086|gb|EEE54218.1| hypothetical protein OsJ_01077 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|11994570|dbj|BAB02616.1| beta-1,3-glucanase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224100991|ref|XP_002312098.1| predicted protein [Populus trichocarpa] gi|222851918|gb|EEE89465.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|222616446|gb|EEE52578.1| hypothetical protein OsJ_34867 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|255557383|ref|XP_002519722.1| hypothetical protein RCOM_0633850 [Ricinus communis] gi|223541139|gb|EEF42695.1| hypothetical protein RCOM_0633850 [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|62733240|gb|AAX95357.1| glucan endo-1,3-beta-glucosidase precursor (ec 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (beta-1,3-endoglucanase) [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|62733152|gb|AAX95269.1| glucan endo-1,3-beta-glucosidase precursor (ec 3.2.1.39) ((1-3)-beta-glucan endohydrolase) ((1-3)-beta-glucanase) (beta-1,3-endoglucanase) [Oryza sativa Japonica Group] gi|108864708|gb|ABG22610.1| Glucan endo-1,3-beta-glucosidase precursor, putative, expressed [Oryza sativa Japonica Group] gi|215704808|dbj|BAG94836.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|255557345|ref|XP_002519703.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] gi|223541120|gb|EEF42676.1| hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297612468|ref|NP_001068545.2| Os11g0704600 [Oryza sativa Japonica Group] gi|62733153|gb|AAX95270.1| glucan endo-1,3-beta-glucosidase precursor (ec 3.2.1.39) ((1-3)-beta-glucan endohydrolase) ((1-3)-beta-glucanase) (beta-1,3-endoglucanase) [Oryza sativa Japonica Group] gi|108864709|gb|ABA95507.2| Glucan endo-1,3-beta-glucosidase precursor, putative, expressed [Oryza sativa Japonica Group] gi|215765238|dbj|BAG86935.1| unnamed protein product [Oryza sativa Japonica Group] gi|255680408|dbj|BAF28908.2| Os11g0704600 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 77 | ||||||
| TAIR|locus:2095440 | 121 | AT3G28250 "AT3G28250" [Arabido | 0.753 | 0.479 | 0.534 | 1e-13 | |
| TAIR|locus:2043979 | 121 | AT2G43670 "AT2G43670" [Arabido | 0.753 | 0.479 | 0.517 | 1.3e-13 | |
| TAIR|locus:2202945 | 115 | AT1G78520 "AT1G78520" [Arabido | 0.766 | 0.513 | 0.457 | 5.6e-13 | |
| TAIR|locus:2161927 | 111 | AT5G63230 "AT5G63230" [Arabido | 0.766 | 0.531 | 0.483 | 5.6e-13 | |
| TAIR|locus:4010714074 | 110 | AT5G63225 "AT5G63225" [Arabido | 0.766 | 0.536 | 0.466 | 1.9e-12 | |
| TAIR|locus:2168631 | 110 | AT5G53610 "AT5G53610" [Arabido | 0.805 | 0.563 | 0.476 | 2.4e-12 | |
| TAIR|locus:2168621 | 111 | AT5G53600 "AT5G53600" [Arabido | 0.727 | 0.504 | 0.482 | 3.9e-12 | |
| TAIR|locus:2043999 | 123 | AT2G43660 "AT2G43660" [Arabido | 0.805 | 0.504 | 0.437 | 5e-12 | |
| TAIR|locus:2139519 | 504 | AT4G34480 [Arabidopsis thalian | 0.870 | 0.132 | 0.422 | 5.8e-12 | |
| TAIR|locus:2161972 | 132 | AT5G63250 "AT5G63250" [Arabido | 0.792 | 0.462 | 0.446 | 8.2e-12 |
| TAIR|locus:2095440 AT3G28250 "AT3G28250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 16 WCIVKPSTGDERLIANIQYCCDHVDCSIIQPGGACYEPNNNYSHASVVMHLFYRANNK 73
WC+ KP T E+LI N+ Y C VDC II GACY P+N Y+ ASVVM+L+Y+A +
Sbjct: 3 WCVAKPGTLTEQLINNLNYACSIVDCQIISTRGACYSPDNIYNMASVVMNLYYQAEGR 60
|
|
| TAIR|locus:2043979 AT2G43670 "AT2G43670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2202945 AT1G78520 "AT1G78520" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2161927 AT5G63230 "AT5G63230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:4010714074 AT5G63225 "AT5G63225" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168631 AT5G53610 "AT5G53610" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168621 AT5G53600 "AT5G53600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2043999 AT2G43660 "AT2G43660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2161972 AT5G63250 "AT5G63250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| BRADI2G08580.1 | annotation not avaliable (121 aa) | |||||||
(Brachypodium distachyon) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 77 | |||
| smart00768 | 85 | smart00768, X8, Possibly involved in carbohydrate | 3e-18 | |
| pfam07983 | 77 | pfam07983, X8, X8 domain | 1e-09 |
| >gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 3e-18
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 15 TWCIVKPSTGDERLIANIQYCCDH-VDCSIIQPGGACYEPNNNYSHASVVMHLFYRANNK 73
WC+ KP + L A + Y C DC+ IQPGG+CY PN +HAS + +Y+ +
Sbjct: 1 LWCVAKPDADEAALQAALDYACGQGADCTAIQPGGSCYSPNTVKAHASYAFNSYYQKQGQ 60
|
The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. Length = 85 |
| >gnl|CDD|219681 pfam07983, X8, X8 domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 77 | |||
| smart00768 | 85 | X8 Possibly involved in carbohydrate binding. The | 99.96 | |
| PF07983 | 78 | X8: X8 domain; InterPro: IPR012946 The X8 domain [ | 99.91 |
| >smart00768 X8 Possibly involved in carbohydrate binding | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=157.26 Aligned_cols=62 Identities=37% Similarity=0.904 Sum_probs=60.0
Q ss_pred eeEEeCCCCChHHHHHHHHhccCc-cccCccCCCCcCCCCCCchhhhhHHHHHHHHHccCCCC
Q 045022 15 TWCIVKPSTGDERLIANIQYCCDH-VDCSIIQPGGACYEPNNNYSHASVVMHLFYRANNKLPH 76 (77)
Q Consensus 15 ~wCVak~~~~~~~l~~~ld~aC~~-~dC~~I~~gg~C~~p~t~~~haSyAfN~Yyq~~~~~~~ 76 (77)
+|||+|+++++++|+++|||||++ +||++|++||+||.|+++++|+|||||+|||++++.++
T Consensus 1 ~wCv~~~~~~~~~l~~~~~yaCg~~~dC~~I~~~g~c~~~~~~~~~aS~a~N~YYq~~~~~~~ 63 (85)
T smart00768 1 LWCVAKPDADEAALQAALDYACGQGADCTAIQPGGSCYSPNTVKAHASYAFNSYYQKQGQSSG 63 (85)
T ss_pred CccccCCCCCHHHHHHHHHHHhcCCCCccccCCCCcccCCCCHHHHHHHHHHHHHHHcCCCCC
Confidence 599999999999999999999999 99999999999999999999999999999999988765
|
The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
| >PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 77 | ||||
| 2jon_A | 101 | Solution Structure Of The C-Terminal Domain Ole E 9 | 1e-12 |
| >pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 77 | |||
| 2jon_A | 101 | Beta-1,3-glucanase; olive pollen, allergen; NMR {O | 2e-16 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 3e-07 |
| >2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 | Back alignment and structure |
|---|
Score = 66.4 bits (162), Expect = 2e-16
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 9 SCEGQTTWCIVKPSTGDERLIANIQYCCDH-VDCSIIQPGGACYEPNNNYSHASVVMHLF 67
+ + +WC+ KP D++L NI Y C +DC IQPGGAC+EPN +HA+ VM+L+
Sbjct: 6 TPKAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLY 65
Query: 68 YRANNKLPHT 77
Y+ +
Sbjct: 66 YQHAGRNSWN 75
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 77 | |||
| 2jon_A | 101 | Beta-1,3-glucanase; olive pollen, allergen; NMR {O | 99.97 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.87 |
| >2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-32 Score=171.91 Aligned_cols=66 Identities=42% Similarity=0.976 Sum_probs=62.4
Q ss_pred CCCceeEEeCCCCChHHHHHHHHhccCc-cccCccCCCCcCCCCCCchhhhhHHHHHHHHHccCCCC
Q 045022 11 EGQTTWCIVKPSTGDERLIANIQYCCDH-VDCSIIQPGGACYEPNNNYSHASVVMHLFYRANNKLPH 76 (77)
Q Consensus 11 ~~~~~wCVak~~~~~~~l~~~ld~aC~~-~dC~~I~~gg~C~~p~t~~~haSyAfN~Yyq~~~~~~~ 76 (77)
..+++|||+|+++++++||++|||||++ +||++|++||+||.|+++++|||||||+|||++++.++
T Consensus 8 ~~~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~ 74 (101)
T 2jon_A 8 KAAGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSW 74 (101)
T ss_dssp CCCSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGG
T ss_pred CCCCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCC
Confidence 3467899999999999999999999999 89999999999999999999999999999999988764
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00