Citrus Sinensis ID: 045086

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520--
MESGGKRRRTDAVLSNGNDKIDPSLLEALEKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAETDRLNELELDDLEMDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAFG
ccccccccccHHccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcc
cccccccccHHHHccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHcHHHHHHHHHccccccHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcc
mesggkrrrtdavlsngndkidPSLLEALEKSQSSVEALDLRTVKKLVLSFERRLKENIEARlkypdqpekfadTEVDLHEELEKLKvlaggpelypdvvnLNVIPSIlgllshdntdiAIDVVHLLqdltdedvledndePARVLVDALIENNVLELLVQNIQrlsdadsdpdEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIkvrefdsnKQYASEILAILLQNSTANqkrlgqmngVDVLLQAVAMYkskdpktsdeEEMLENLFDSLCCVlmplenkeRFVKAEGVELMIIIMKQKKSAYASAIRALDFamtkyppaceRFVDVLGLKTAFAAFmgkipvnkknKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAETDrlnelelddlemDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHdnigdldgpeEKERAQARIQKFISAFG
mesggkrrrtdavlsngndkidpSLLEALEKSqssvealdlrtvKKLVLSFERRLKENiearlkypdqpekFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAafmgkipvnkknKKERYQEELEERLVSLIAslfggilrgsrrerllskfienecekidRLMELYMRYSDrvraetdrlnelelddlemdEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHdnigdldgpeEKERAQARIQKFISAFG
MESGGKRRRTDAVLSNGNDKIDPSLLEALEKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAetdrlnelelddlemdeeeKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIElllkqqkltkkDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAFG
**************************************LDLRTVKKLVLSFERRLKENIEARL***********TEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRL*********MAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMY*************LENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNK*********ELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRA**********************RKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHD**************************
**************************************LDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKS**P**SDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAF*********************RLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDR*********************EKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHD******************QKFISAFG
***********AVLSNGNDKIDPSLLEALEKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKS*********EMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAETDRLNELELDDLEMDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAFG
*******************KIDPSLLEALEKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIP********RYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAETDRLNELELDDLEMDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAFG
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MESGGKRRRTDAVLSNGNDKIDPSLLEALEKSQSSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELxxxxxxxxxxxxxxxxxxxxxDLEMDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAFG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query522 2.2.26 [Sep-21-2011]
O62703563 Beta-catenin-like protein yes no 0.911 0.845 0.437 1e-107
Q8WYA6563 Beta-catenin-like protein yes no 0.911 0.845 0.439 1e-106
Q4V8K2563 Beta-catenin-like protein yes no 0.911 0.845 0.437 1e-106
Q9CWL8563 Beta-catenin-like protein yes no 0.911 0.845 0.433 1e-105
Q9UUK1564 Uncharacterized protein C yes no 0.888 0.822 0.338 1e-68
>sp|O62703|CTBL1_BOVIN Beta-catenin-like protein 1 OS=Bos taurus GN=CTNNBL1 PE=2 SV=3 Back     alignment and function desciption
 Score =  387 bits (995), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 216/494 (43%), Positives = 335/494 (67%), Gaps = 18/494 (3%)

Query: 39  LDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEVDLHEELEKLKVLAGGPELYPD 98
           LD  +VKK++L+FE+R  +N E R+K+PD PEKF ++E+DL++ ++++ V+A  P+LY  
Sbjct: 77  LDESSVKKMILTFEKRSYKNQELRIKFPDNPEKFMESELDLNDIIQEMHVVATMPDLYHL 136

Query: 99  VVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLEL 158
           +V LN + S+LGLL HDNTD++I VV LLQ+LTD D L +++E A VL DAL++  V+ L
Sbjct: 137 LVELNAVQSLLGLLGHDNTDVSIAVVDLLQELTDIDTLHESEEGAEVLTDALVDGQVVAL 196

Query: 159 LVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVR- 217
           LVQ+++RL   +S  +E   V+NTLA +EN+ E +P +     ++  LL+WLL ++K + 
Sbjct: 197 LVQDLERLD--ESVKEEADGVHNTLAIVENMAEFRPEMCTEAAQQG-LLQWLLKRLKAKM 253

Query: 218 EFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENL 277
            FD+NK Y SE+LAILLQ++  N++ LG+++G+DVLLQ ++++K  +P T++E+EM+ENL
Sbjct: 254 PFDANKLYCSEVLAILLQDNDENRELLGELDGIDVLLQQLSVFKRHNPSTAEEQEMMENL 313

Query: 278 FDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYASAIRALDFAMT--KYPPACERF 335
           FDSLC  LM   N+ERF+K EG++LM +++++KK + +SA++ LD AM   +    C +F
Sbjct: 314 FDSLCSCLMLSSNRERFLKGEGLQLMNLMLREKKISRSSALKVLDHAMIGPEGTDNCHKF 373

Query: 336 VDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRERLLSKF 395
           VD+LGL+T F  FM K P  K  K    ++E EE + S++ASL    LRG +R RLL+KF
Sbjct: 374 VDILGLRTIFPLFM-KSP-RKIKKVGTTEKEHEEHVCSILASLLRN-LRGQQRTRLLNKF 430

Query: 396 IENECEKIDRLMELYMRYSDRVRA--------ETDRLNELELDDLEMDEEEKYNRKLESG 447
            EN+ EK+DRLMEL+ +Y D V+         + D +   E+ D ++ E+E Y R+L++G
Sbjct: 431 TENDSEKVDRLMELHFKYLDAVQVADKKIEGEKHDMVRRGEIIDNDI-EDEFYLRRLDAG 489

Query: 448 LYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEK 507
           L+ LQ I  I+  +  +  PQ+R R+  +L  +  + K V+ I++EY +NIGD   PE +
Sbjct: 490 LFVLQHICYIMAEICNANVPQIRQRVHQILNMRGSSIKIVRHIIKEYAENIGDGRSPEFR 549

Query: 508 ERAQARIQKFISAF 521
           E  Q RI   +  F
Sbjct: 550 ESEQKRILALLENF 563
Induces apoptosis in CHO cells.
Bos taurus (taxid: 9913)
>sp|Q8WYA6|CTBL1_HUMAN Beta-catenin-like protein 1 OS=Homo sapiens GN=CTNNBL1 PE=1 SV=1 Back     alignment and function description
>sp|Q4V8K2|CTBL1_RAT Beta-catenin-like protein 1 OS=Rattus norvegicus GN=Ctnnbl1 PE=2 SV=1 Back     alignment and function description
>sp|Q9CWL8|CTBL1_MOUSE Beta-catenin-like protein 1 OS=Mus musculus GN=Ctnnbl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9UUK1|YLO6_SCHPO Uncharacterized protein C1952.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1952.06c PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query522
255570461535 conserved hypothetical protein [Ricinus 0.969 0.945 0.869 0.0
225463751534 PREDICTED: beta-catenin-like protein 1-l 0.990 0.968 0.820 0.0
225466281534 PREDICTED: beta-catenin-like protein 1-l 0.990 0.968 0.816 0.0
357460647525 Beta-catenin-like protein [Medicago trun 0.986 0.980 0.830 0.0
388498034525 unknown [Medicago truncatula] 0.986 0.980 0.826 0.0
449445061526 PREDICTED: beta-catenin-like protein 1-l 0.994 0.986 0.823 0.0
356569863528 PREDICTED: beta-catenin-like protein 1-l 0.986 0.975 0.838 0.0
297828732529 hypothetical protein ARALYDRAFT_477511 [ 0.963 0.950 0.814 0.0
30678649529 beta-catenin-like protein 1 [Arabidopsis 0.963 0.950 0.806 0.0
116787235516 unknown [Picea sitchensis] 0.988 1.0 0.729 0.0
>gi|255570461|ref|XP_002526189.1| conserved hypothetical protein [Ricinus communis] gi|223534493|gb|EEF36193.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  910 bits (2351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/513 (86%), Positives = 489/513 (95%), Gaps = 7/513 (1%)

Query: 14  LSNGN-DKIDPSLLEALEKSQ--SSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPE 70
           ++NG+ + ID SLLEALEKSQ  ++VE LD+RT+KKLVLSFERR KENIEARLKYPDQPE
Sbjct: 25  MANGDKNNIDLSLLEALEKSQKENTVEVLDIRTLKKLVLSFERRYKENIEARLKYPDQPE 84

Query: 71  KFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDL 130
           +FAD+E++LH+ELEKLK+LAGGPELYP++VNLN IPSI+GLLSHDNTDIAIDVV LLQDL
Sbjct: 85  RFADSELELHQELEKLKILAGGPELYPELVNLNTIPSIVGLLSHDNTDIAIDVVQLLQDL 144

Query: 131 TDEDVL--EDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIEN 188
           TDEDV    D DEPARVLVDAL+ENNVLELLVQN+ RLS  ++DPDEMAAVYNTLATIEN
Sbjct: 145 TDEDVFVDVDTDEPARVLVDALVENNVLELLVQNLLRLS--ENDPDEMAAVYNTLATIEN 202

Query: 189 LIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMN 248
           LIEVKPSVAELVCERTK++RWLLGKIKVREFDSNKQYASEILAILLQNS+ANQKRLGQMN
Sbjct: 203 LIEVKPSVAELVCERTKIMRWLLGKIKVREFDSNKQYASEILAILLQNSSANQKRLGQMN 262

Query: 249 GVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMK 308
           GVDV+LQAVAMYKSKDPK+SDEEEM+ENLFD LCC+LMPLENKERFVKAEGVELMIIIMK
Sbjct: 263 GVDVVLQAVAMYKSKDPKSSDEEEMVENLFDCLCCLLMPLENKERFVKAEGVELMIIIMK 322

Query: 309 QKKSAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELE 368
           QKKSAY SAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIP++KKNKKERYQEELE
Sbjct: 323 QKKSAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPISKKNKKERYQEELE 382

Query: 369 ERLVSLIASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAETDRLNELE 428
           ER+VSLIASLFGGILRGSRRERLLSKF+ENECEKIDRLME+Y+RYSDRV+ ET+R+++LE
Sbjct: 383 ERIVSLIASLFGGILRGSRRERLLSKFVENECEKIDRLMEIYIRYSDRVKGETERMDQLE 442

Query: 429 LDDLEMDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIELLLKQQKLTKKDVK 488
           LDDLEMDEEE+YNRKLESGLYTLQLIAVILGHLWCSE P+MR RIELLLKQ KLT+KDVK
Sbjct: 443 LDDLEMDEEERYNRKLESGLYTLQLIAVILGHLWCSEHPRMRARIELLLKQHKLTRKDVK 502

Query: 489 DILQEYHDNIGDLDGPEEKERAQARIQKFISAF 521
           DILQEYHDNIGD+DGPEEKERAQ RIQKFISAF
Sbjct: 503 DILQEYHDNIGDVDGPEEKERAQTRIQKFISAF 535

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225463751|ref|XP_002265451.1| PREDICTED: beta-catenin-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225466281|ref|XP_002269892.1| PREDICTED: beta-catenin-like protein 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|357460647|ref|XP_003600605.1| Beta-catenin-like protein [Medicago truncatula] gi|355489653|gb|AES70856.1| Beta-catenin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|388498034|gb|AFK37083.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449445061|ref|XP_004140292.1| PREDICTED: beta-catenin-like protein 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356569863|ref|XP_003553114.1| PREDICTED: beta-catenin-like protein 1-like [Glycine max] Back     alignment and taxonomy information
>gi|297828732|ref|XP_002882248.1| hypothetical protein ARALYDRAFT_477511 [Arabidopsis lyrata subsp. lyrata] gi|297328088|gb|EFH58507.1| hypothetical protein ARALYDRAFT_477511 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30678649|ref|NP_186920.2| beta-catenin-like protein 1 [Arabidopsis thaliana] gi|126354926|gb|ABO09895.1| At3g02710 [Arabidopsis thaliana] gi|332640329|gb|AEE73850.1| beta-catenin-like protein 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|116787235|gb|ABK24423.1| unknown [Picea sitchensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query522
TAIR|locus:2076974529 AT3G02710 [Arabidopsis thalian 0.961 0.948 0.764 4.1e-200
UNIPROTKB|E1BW50564 CTNNBL1 "Uncharacterized prote 0.977 0.904 0.414 6.2e-101
UNIPROTKB|F1MMG3563 CTNNBL1 "Beta-catenin-like pro 0.982 0.911 0.410 5.6e-100
UNIPROTKB|O62703563 CTNNBL1 "Beta-catenin-like pro 0.982 0.911 0.408 1.9e-99
UNIPROTKB|B4DE16536 CTNNBL1 "Beta-catenin-like pro 0.982 0.957 0.408 1.9e-99
UNIPROTKB|Q8WYA6563 CTNNBL1 "Beta-catenin-like pro 0.982 0.911 0.408 1.9e-99
RGD|1563558563 Ctnnbl1 "catenin, beta like 1" 0.978 0.907 0.406 2.4e-99
MGI|MGI:1913892563 Ctnnbl1 "catenin, beta like 1" 0.978 0.907 0.403 2.2e-98
FB|FBgn0037644581 CG11964 [Drosophila melanogast 0.936 0.841 0.382 3.7e-87
ASPGD|ASPL0000038366585 AN9119 [Emericella nidulans (t 0.898 0.801 0.352 7.7e-71
TAIR|locus:2076974 AT3G02710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1937 (686.9 bits), Expect = 4.1e-200, P = 4.1e-200
 Identities = 386/505 (76%), Positives = 429/505 (84%)

Query:    17 GNDKIDPSLLEALEKSQ-SSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADT 75
             G+D +D SLLEALEKS  + VEALDL+T+KKLVLSFERRL++NI ARLKY + PEKFAD+
Sbjct:    26 GSDGVDLSLLEALEKSSHNGVEALDLKTLKKLVLSFERRLRDNIAARLKYVENPEKFADS 85

Query:    76 EVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDV 135
             EVDLH++L+KLKVLAG PELYPD+V  N +PSI+ LLSH+N+DIA DVV LLQDLTDED 
Sbjct:    86 EVDLHDDLQKLKVLAGAPELYPDLVASNTVPSIVNLLSHENSDIANDVVQLLQDLTDEDA 145

Query:   136 LEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPS 195
             LEDNDEPARVLVDAL+ENNVLELLVQN+ RLS+AD  PDE  A+Y TL  IENL+EVKP+
Sbjct:   146 LEDNDEPARVLVDALVENNVLELLVQNMNRLSEAD--PDEATAIYATLTVIENLVEVKPA 203

Query:   196 VAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQ 255
             VA+LVCERTKLLRWLL KIKVREF+  KQYASEILAILLQNSTANQKRLGQMNGVD +L+
Sbjct:   204 VAQLVCERTKLLRWLLTKIKVREFEGIKQYASEILAILLQNSTANQKRLGQMNGVDAVLE 263

Query:   256 AVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQKKSAYA 315
              VAMYKSKDPKT DEEEMLENLFD LCC+LMPLENKERFV AEGVELMIIIMKQKK AY 
Sbjct:   264 GVAMYKSKDPKTPDEEEMLENLFDCLCCLLMPLENKERFVNAEGVELMIIIMKQKKYAYG 323

Query:   316 SAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLI 375
             SAIRALDFAMT YPPACERFVDV+GLKTAFAAFMGKIP+NK+ K+ERY+EELEER++SLI
Sbjct:   324 SAIRALDFAMTNYPPACERFVDVMGLKTAFAAFMGKIPLNKRIKRERYKEELEERVISLI 383

Query:   376 ASLFGGILRGSRRERLLSKFIENECEKIDRLMELYMRYSDRVRAXXXXXXXXXXXXXXXX 435
             ASLF GILRGSRR+RLLSKF+ENE EKIDRLMELY+RYSDRVR+                
Sbjct:   384 ASLFAGILRGSRRDRLLSKFVENEFEKIDRLMELYLRYSDRVRSEAERLDQLELDDLELD 443

Query:   436 XXXKYNRKLESGLYTLQLIAVILGHLWCSEQPQMRTRIEXXXXXXXXXXXDVKDILQEYH 495
                KYNRKLESGLY+LQL+AVILGH+WCSE   MR R+E           DVK ILQEYH
Sbjct:   444 EDEKYNRKLESGLYSLQLVAVILGHIWCSEHSGMRARVELLLKQQKLSKTDVKQILQEYH 503

Query:   496 DNIGDLDGPEEKERAQARIQKFISA 520
             DNIGDLDG EEKER QARIQ FISA
Sbjct:   504 DNIGDLDGAEEKERGQARIQLFISA 528
GO:0005634 "nucleus" evidence=ISM
GO:0008380 "RNA splicing" evidence=ISS
GO:0042732 "D-xylose metabolic process" evidence=RCA
UNIPROTKB|E1BW50 CTNNBL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMG3 CTNNBL1 "Beta-catenin-like protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O62703 CTNNBL1 "Beta-catenin-like protein 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|B4DE16 CTNNBL1 "Beta-catenin-like protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8WYA6 CTNNBL1 "Beta-catenin-like protein 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1563558 Ctnnbl1 "catenin, beta like 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1913892 Ctnnbl1 "catenin, beta like 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
FB|FBgn0037644 CG11964 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ASPGD|ASPL0000038366 AN9119 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8WYA6CTBL1_HUMANNo assigned EC number0.43920.91180.8454yesno
Q9CWL8CTBL1_MOUSENo assigned EC number0.43310.91180.8454yesno
O62703CTBL1_BOVINNo assigned EC number0.43720.91180.8454yesno
Q4V8K2CTBL1_RATNo assigned EC number0.43720.91180.8454yesno
Q9UUK1YLO6_SCHPONo assigned EC number0.33870.88880.8226yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query522
pfam08216108 pfam08216, DUF1716, Eukaryotic domain of unknown f 8e-36
>gnl|CDD|219749 pfam08216, DUF1716, Eukaryotic domain of unknown function (DUF1716) Back     alignment and domain information 
 Score =  128 bits (324), Expect = 8e-36
 Identities = 56/107 (52%), Positives = 81/107 (75%), Gaps = 1/107 (0%)

Query: 19  DKIDPSLLEALEKSQSS-VEALDLRTVKKLVLSFERRLKENIEARLKYPDQPEKFADTEV 77
           ++ D  +LE LE ++   VE LD  ++KKLVL FE+R+++N E R+K+PD PEKF ++EV
Sbjct: 2   EEEDLDILEILEAAEEDGVEVLDESSLKKLVLVFEKRIRKNQELRIKFPDDPEKFMESEV 61

Query: 78  DLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVV 124
           DL + +++LKVLA  P+LYP +V LN + S+L LL+H+NTDIAI VV
Sbjct: 62  DLDDIIQELKVLATCPDLYPSLVELNGVSSLLSLLNHENTDIAIAVV 108

This domain is found in eukaryotic proteins. A human nuclear protein with this domain is thought to have a role in apoptosis. Length = 108

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 522
KOG2734536 consensus Uncharacterized conserved protein [Funct 100.0
PF08216108 CTNNBL: Catenin-beta-like, Arm-motif containing nu 100.0
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 97.82
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 97.74
PF05804708 KAP: Kinesin-associated protein (KAP) 97.67
PF05804708 KAP: Kinesin-associated protein (KAP) 97.56
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 97.38
KOG2160342 consensus Armadillo/beta-catenin-like repeat-conta 97.25
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 96.68
PF03224312 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 96.05
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 96.04
PF03224312 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004 95.85
PF08045257 CDC14: Cell division control protein 14, SIN compo 95.35
PF08045257 CDC14: Cell division control protein 14, SIN compo 95.03
KOG4199461 consensus Uncharacterized conserved protein [Funct 94.77
KOG0166514 consensus Karyopherin (importin) alpha [Intracellu 94.45
cd00256429 VATPase_H VATPase_H, regulatory vacuolar ATP synth 93.52
KOG1048717 consensus Neural adherens junction protein Plakoph 92.96
PF0051441 Arm: Armadillo/beta-catenin-like repeat; InterPro: 92.55
KOG2160342 consensus Armadillo/beta-catenin-like repeat-conta 91.46
PF06371187 Drf_GBD: Diaphanous GTPase-binding Domain; InterPr 91.26
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 89.89
TIGR03060214 PS_II_psb29 photosystem II biogenesis protein Psp2 89.55
PF13764 802 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 89.51
KOG0166514 consensus Karyopherin (importin) alpha [Intracellu 89.06
smart0018541 ARM Armadillo/beta-catenin-like repeats. Approx. 4 88.23
KOG1293678 consensus Proteins containing armadillo/beta-caten 87.48
PF11264216 ThylakoidFormat: Thylakoid formation protein; Inte 87.3
PRK13266225 Thf1-like protein; Reviewed 86.4
KOG4189209 consensus Uncharacterized conserved protein [Funct 86.12
PF13764 802 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 84.15
PLN03060206 inositol phosphatase-like protein; Provisional 82.62
KOG4199461 consensus Uncharacterized conserved protein [Funct 80.77
PF10165 446 Ric8: Guanine nucleotide exchange factor synembryn 80.31
KOG4224 550 consensus Armadillo repeat protein VAC8 required f 80.17
>KOG2734 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-141  Score=1096.27  Aligned_cols=509  Identities=47%  Similarity=0.767  Sum_probs=468.3

Q ss_pred             CCCCCccccccc---------cCCCCC--CchhHHHHHHhcc-cchhccCHHHHHHHHHHHHHHHHHhHHHHhcCCCCCc
Q 045086            3 SGGKRRRTDAVL---------SNGNDK--IDPSLLEALEKSQ-SSVEALDLRTVKKLVLSFERRLKENIEARLKYPDQPE   70 (522)
Q Consensus         3 ~~~~~~~~~~~~---------~~~~~~--~~~~~l~~~e~~~-~~~e~lD~~~lkklvl~fEk~i~kNqe~R~K~~ddP~   70 (522)
                      .+-|||+.+++.         .+|+++  .+.-..+.++++. .-.+-+|....+|||+.|||++++|||+|+||||+|+
T Consensus        13 ~~~KRp~d~~~~~~es~~~~kq~gs~~~ee~~~~~eeae~s~~~~L~~ld~~~~~klvl~~ekr~~~Nqe~RiK~~dnPe   92 (536)
T KOG2734|consen   13 RGIKRPADDADEPAESKMRQKQTGSDEWEEDMFVVEEAEKSKHNLLDILDTQEAKKLVLRFEKRIRKNQELRIKYPDNPE   92 (536)
T ss_pred             cCCCCCCccccchhhhhhhhhhcCCCCCcchhhHHHhhhhhhhHHHHHHhhhhHHHHHHHHHHHhhhhHHhhccCCCCHH
Confidence            466888887642         333333  3444445555543 4455688889999999999999999999999999999


Q ss_pred             cccccHhhHHHHHHhhhccccCCCChHHHHhcCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHH
Q 045086           71 KFADTEVDLHEELEKLKVLAGGPELYPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDAL  150 (522)
Q Consensus        71 KFmdSE~dLd~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL  150 (522)
                      |||+||+|||.+|++|+++||+|+|||.||+++||+||++||+|+||||+|+|+++|+||||+|+..|+++++..||+||
T Consensus        93 KFmeSE~dLhd~IQ~mhvlAt~PdLYp~lveln~V~slL~LLgHeNtDI~iavvdLLqELTD~Dv~~es~egAevLidaL  172 (536)
T KOG2734|consen   93 KFMESEVDLHDIIQEMHVLATMPDLYPILVELNAVQSLLELLGHENTDIAIAVVDLLQELTDEDVLYESEEGAEVLIDAL  172 (536)
T ss_pred             HHHHhhccHHHHHHHHHhhhcChHHHHHHHHhccHHHHHHHhcCCCchhHHHHHHHHHHhhhhcccccccccHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhcChHHHHHHHhhhhcCCCCChhHHHHHHHHHHHHHhhhccChhHHHHHhhhhchHHHHHhhcccc-CCChhhhhHHHH
Q 045086          151 IENNVLELLVQNIQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVR-EFDSNKQYASEI  229 (522)
Q Consensus       151 ~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k-~~d~Nk~YAsEi  229 (522)
                      ++++++.+||||++||||+  +++|+.|||++|+++|||++++|++|..+|++ +++.|||+|++.+ .||.||+|||||
T Consensus       173 vdg~vlaLLvqnveRLdEs--vkeea~gv~~~L~vveNlv~~r~~~~~~~~e~-~ll~WLL~rl~~k~~f~aNk~YasEi  249 (536)
T KOG2734|consen  173 VDGQVLALLVQNVERLDES--VKEEADGVHNTLAVVENLVEVRPAICTEIVEQ-GLLSWLLKRLKGKAAFDANKQYASEI  249 (536)
T ss_pred             HhccHHHHHHHHHHHhhhc--chhhhhhhHHHHHHHHHHHhccHHHHHHHHHh-hHHHHHHHHHhcccCcchhHHHHHHH
Confidence            9999999999999999999  99999999999999999999999999999977 8999999999998 499999999999


Q ss_pred             HHHHhcCChHHHHHhhhhchHHHHHHHHhhcccCCCCCCcHHHHHHhHHHHHHHhhCChhhHHHHHHhhhHHHHHHHHhc
Q 045086          230 LAILLQNSTANQKRLGQMNGVDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLENKERFVKAEGVELMIIIMKQ  309 (522)
Q Consensus       230 LaILLQ~s~~nr~~~~~~dGiD~LL~~la~YrkrDP~~~eE~E~mENlFd~Lcs~L~~~~nk~~Fl~~EGveLM~lmlke  309 (522)
                      |+||+|+|.+||..+|.+||||.||+.||+||++||++.+|+|||||+||||||+||.|+||++|+++||+|||++|||+
T Consensus       250 Laillq~s~e~~~~~~~l~GiD~lL~~la~yk~~dP~~~~E~EmmeNLFdcLCs~lm~~~nr~~Fl~~EGlqLm~Lmlr~  329 (536)
T KOG2734|consen  250 LAILLQNSDENRKLLGPLDGIDVLLRQLAVYKRHDPATVDEEEMMENLFDCLCSLLMAPANRERFLKGEGLQLMNLMLRE  329 (536)
T ss_pred             HHHHhccCchhhhhhcCcccHHHHHhhcchhhccCCCCcCHHHHHHHHHHHHHHHhcChhhhhhhhccccHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhhhhhHHHHHHHhcCC--cchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhccCCCcch
Q 045086          310 KKSAYASAIRALDFAMTKY--PPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRGSR  387 (522)
Q Consensus       310 kk~sr~~AlKvLD~Al~~~--~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~s~  387 (522)
                      ||.||++|+|||||||+|+  .+||+|||+++||||+||+|| |+|+ |..++..+..+++||||+||+||||+| .+.+
T Consensus       330 Kk~sr~SalkvLd~am~g~~gt~~C~kfVe~lGLrtiF~~FM-k~p~-k~~~~~~t~~e~eEhv~siiaSl~~~~-~~~~  406 (536)
T KOG2734|consen  330 KKVSRGSALKVLDHAMFGPEGTPNCNKFVEILGLRTIFPLFM-KTPL-KRKKRKISADEHEEHVCSILASLLRNL-DGVH  406 (536)
T ss_pred             HHHhhhhHHHHHHHHHhCCCchHHHHHHHHHHhHHHHHHHHh-hCcc-chhcccCcHHHHHHHHHHHHHHHHHhc-cccH
Confidence            9999999999999999995  599999999999999999999 5565 445556788999999999999999999 5888


Q ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccCchhhhHHHHHHHhhhhhhhHHHHHHHHHHHHhhcCCh
Q 045086          388 RERLLSKFIENECEKIDRLMELYMRYSDRVRAETDRLNELELDDLEMDEEEKYNRKLESGLYTLQLIAVILGHLWCSEQP  467 (522)
Q Consensus       388 r~RlLaKFvE~d~EKvdRL~eL~~~Y~~rv~~~~~~~~~~~~~~~e~~e~e~yl~rLdaGLftLQ~id~Ila~l~~~~~~  467 (522)
                      |.|+++|||||||||+|||++||.+|..+|+..+++-+. +..+.++.++.||++|||+|||+||.+++|+.|+| +.-+
T Consensus       407 r~R~l~KF~End~EKvdRl~el~lky~~~v~~~d~~~~~-d~~~~dd~~~~~~l~~l~~glF~lq~~~lIl~e~~-~~~~  484 (536)
T KOG2734|consen  407 RQRLLRKFVENDFEKVDRLMELYLKYLIKVQGIDESQKL-DFIDEDDKEEKWYLQRLDHGLFTLQRLVLILSEVC-ANVV  484 (536)
T ss_pred             HHHHHHHHhccccHHHHHHHHHHHHHHHHhhhHHHHhhh-ccCcccchhhhHHHHHhcccchHHHHHHHHHHHHH-hhhH
Confidence            999999999999999999999999999999987643322 22445567899999999999999999999999997 8889


Q ss_pred             hHHHHHHHHHHhcCCChhHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHhh
Q 045086          468 QMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEKERAQARIQKFISAF  521 (522)
Q Consensus       468 ~~~~~i~~lL~~~~~~~~~I~~~l~ey~~~lgd~~~~e~~~~~~~~i~~~~~~~  521 (522)
                      .+++++.+++++++.+.+.++.++++|.+|+||+  ..+++..+..|..+++.|
T Consensus       485 ~~~~r~~~~~~~~~~s~~~~~~i~~ey~en~gd~--~~~r~~e~~~vl~l~~~f  536 (536)
T KOG2734|consen  485 TLKQRVMQILNMRGSSDKLLRNIIEEYAENLGDG--SYYREDEQPMILSLLESF  536 (536)
T ss_pred             HHHHHHHHHHHccccccccchHHHHHhhhccCCc--cccChhhhhhhhhhcccC
Confidence            9999999999999999999999999999999985  889999999998887654

>PF08216 CTNNBL: Catenin-beta-like, Arm-motif containing nuclear; InterPro: IPR013180 This domain is found in eukaryotic proteins Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>PF03224 V-ATPase_H_N: V-ATPase subunit H; InterPro: IPR004908 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane Back     alignment and domain information
>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1 Back     alignment and domain information
>PF08045 CDC14: Cell division control protein 14, SIN component; InterPro: IPR012535 Cdc14 is a component of the septation initiation network (SIN) and is required for the localisation and activity of Sid1 Back     alignment and domain information
>KOG4199 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00256 VATPase_H VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments Back     alignment and domain information
>KOG1048 consensus Neural adherens junction protein Plakophilin and related Armadillo repeat proteins [Signal transduction mechanisms; Extracellular structures] Back     alignment and domain information
>PF00514 Arm: Armadillo/beta-catenin-like repeat; InterPro: IPR000225 The armadillo (Arm) repeat is an approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila melanogaster segment polarity gene armadillo involved in signal transduction through wingless Back     alignment and domain information
>KOG2160 consensus Armadillo/beta-catenin-like repeat-containing protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF06371 Drf_GBD: Diaphanous GTPase-binding Domain; InterPro: IPR010473 Diaphanous-related formins (Drfs) are a family of formin homology (FH) proteins that act as effectors of Rho small GTPases during growth factor-induced cytoskeletal remodelling, stress fibre formation, and cell division [] Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>TIGR03060 PS_II_psb29 photosystem II biogenesis protein Psp29 Back     alignment and domain information
>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 Back     alignment and domain information
>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>smart00185 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>KOG1293 consensus Proteins containing armadillo/beta-catenin-like repeat [General function prediction only] Back     alignment and domain information
>PF11264 ThylakoidFormat: Thylakoid formation protein; InterPro: IPR017499 Psp29, originally designated sll1414 (P73956 from SWISSPROT) in Synechocystis sp Back     alignment and domain information
>PRK13266 Thf1-like protein; Reviewed Back     alignment and domain information
>KOG4189 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4 Back     alignment and domain information
>PLN03060 inositol phosphatase-like protein; Provisional Back     alignment and domain information
>KOG4199 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF10165 Ric8: Guanine nucleotide exchange factor synembryn; InterPro: IPR019318 Ric8 is involved in the EGL-30 neurotransmitter signalling pathway [] Back     alignment and domain information
>KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query522
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 3e-04
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 5e-04
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 6e-04
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 77.6 bits (190), Expect = 4e-15
 Identities = 69/472 (14%), Positives = 134/472 (28%), Gaps = 102/472 (21%)

Query: 96  YPDVVNLNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDV-----LEDNDEPARVLVDAL 150
           Y D++++     +      D  D+   +      L+ E++      +D       L   L
Sbjct: 18  YKDILSVFEDAFVDNFDCKDVQDMPKSI------LSKEEIDHIIMSKDAVSGTLRLFWTL 71

Query: 151 IENN-------VLELLVQN----IQRLSDADSDPDEMAAVYNTLATIENLIEVKPSVAEL 199
           +          V E+L  N    +  +      P  M  +Y      + L       A+ 
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE--QRDRLYNDNQVFAKY 129

Query: 200 VCERTKL---LRWLLGKIKVREF-------DSNKQYASEILAILLQNSTANQKRLGQMNG 249
              R +    LR  L +++  +         S K      +A+          ++     
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT----WVAL----DVCLSYKVQCKMD 181

Query: 250 VDVLLQAVAMYKSKDPKTSDEEEMLENLFDSLCCVLMPLEN-----KERFVKAEGVELMI 304
             +    +    S +       EML+ L   +        +     K R    +     +
Sbjct: 182 FKIFWLNLKNCNSPE----TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 305 IIMKQKKSAY--------ASAIRALDFAMTKYPPACE-----RFVDVLGLKTAFAAFMGK 351
           +  K  ++          A A  A + +       C+     RF  V       +A    
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLS-------CKILLTTRFKQVT---DFLSAATTT 287

Query: 352 IPVNKKNKKERYQEELEERLVSLIASLFGGILRGSRRE------RLLSKFIENECEKIDR 405
                 +      +E++     L+        +   RE      R LS   E+  + +  
Sbjct: 288 HISLDHHSMTLTPDEVKS----LLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Query: 406 LMELYMRYSDRVRAETDRLN---ELELDDLEMDEEEKYNRKL----ESGLYTLQLIAVIL 458
             + +           D+L    E  L+ LE  E  K   +L     S      L+++  
Sbjct: 344 W-DNWKHV------NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL-- 394

Query: 459 GHLWCSEQPQMRTRIELLLKQQKLTKKDVKDILQEYHDNIGDLDGPEEKERA 510
             +W          +   L +  L +K  K+          +L    E E A
Sbjct: 395 --IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Length = 529 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Length = 780 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query522
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 99.14
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 99.08
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 98.82
4hxt_A252 De novo protein OR329; structural genomics, PSI-bi 98.81
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 98.77
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 98.74
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 98.74
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 98.72
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 98.7
4db8_A252 Armadillo-repeat protein; solenoid repeat, de novo 98.7
1jdh_A529 Beta-catenin; beta-catenin, protein-protein comple 98.7
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 98.69
2z6h_A 644 Catenin beta-1, beta-catenin; C-terminal domain, a 98.67
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 98.65
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 98.6
2jdq_A450 Importin alpha-1 subunit; transport, PB2 subunit, 98.59
1wa5_B530 Importin alpha subunit; nuclear transport/complex, 98.56
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 98.55
4b8j_A528 Importin subunit alpha-1A; transport protein, nucl 98.51
3nmz_A458 APC variant protein; protein-protein complex, arma 98.51
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 98.48
3nmz_A458 APC variant protein; protein-protein complex, arma 98.46
3tpo_A529 Importin subunit alpha-2; nuclear import, protein 98.37
2z6g_A780 B-catenin; FULL-length, beta-catenin, cell adhesio 98.35
2z6g_A 780 B-catenin; FULL-length, beta-catenin, cell adhesio 98.32
3ul1_B510 Importin subunit alpha-2; arm repeat, armadillo re 98.24
3nmw_A354 APC variant protein; ARMADIILO repeats domain, cel 98.22
4db6_A210 Armadillo repeat protein; solenoid repeat, armadil 98.21
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 98.14
1xm9_A457 Plakophilin 1; armadillo repeat, cell adhesion; 2. 98.09
3grl_A 651 General vesicular transport factor P115; vesicle t 97.88
1xqr_A296 HSPBP1 protein; armadillo repeat, superhelical twi 97.75
3l6x_A584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 97.58
3now_A810 UNC-45 protein, SD10334P; armadillo repeat, HSP90, 97.52
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 97.41
3l6x_A 584 Catenin delta-1; catenin, armadillo, ARM, JMD, CE 97.36
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 96.81
3opb_A778 SWI5-dependent HO expression protein 4; heat and a 96.53
3tt9_A233 Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} 96.26
3grl_A651 General vesicular transport factor P115; vesicle t 96.14
4gmo_A 684 Putative uncharacterized protein; ARM, heat, solen 95.62
3eg5_B383 Protein diaphanous homolog 1; protein-protein comp 94.52
2bnx_A386 Diaphanous protein homolog 1; autoinhibition, acti 94.41
2f31_A233 Diaphanous protein homolog 1; formin,MDIA1, protei 94.32
3dad_A339 FH1/FH2 domain-containing protein 1; formin, FHOD1 91.9
4fdd_A 852 Transportin-1; heat repeats, karyopherin, nuclear 82.48
3dad_A339 FH1/FH2 domain-containing protein 1; formin, FHOD1 80.79
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
Probab=99.14  E-value=6.6e-09  Score=95.96  Aligned_cols=244  Identities=16%  Similarity=0.224  Sum_probs=196.4

Q ss_pred             cCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHH
Q 045086          102 LNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYN  181 (522)
Q Consensus       102 l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~  181 (522)
                      +|+++.|+.+|.|+|.++...++..|..++..+.         .....+++.+++..|++-|..   .  +   ..-..+
T Consensus         1 ~~~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~---------~~~~~~~~~g~i~~L~~ll~~---~--~---~~v~~~   63 (252)
T 4hxt_A            1 MNDVEKLVKLLTSTDSETQKEAARDLAEIASGPA---------SAIKAIVDAGGVEVLVKLLTS---T--D---SEVQKE   63 (252)
T ss_dssp             CCHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCH---------HHHHHHHHTTHHHHHHHHTTC---S--C---HHHHHH
T ss_pred             CCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc---------HHHHHHHHCCCHHHHHHHHhC---C--C---HHHHHH
Confidence            4789999999999999999999999999987652         233566677899888887643   2  2   345567


Q ss_pred             HHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcc
Q 045086          182 TLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYK  261 (522)
Q Consensus       182 ~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Yr  261 (522)
                      ++..+-|+..-.|+....+. +.+.++.|++-++.. -..-+.+|...|+-|.+.++.++..+.+.+++..|++.+.   
T Consensus        64 a~~~L~~l~~~~~~~~~~~~-~~~~i~~l~~ll~~~-~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~---  138 (252)
T 4hxt_A           64 AARALANIASGPDEAIKAIV-DAGGVEVLVKLLTST-DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT---  138 (252)
T ss_dssp             HHHHHHHHTTSCHHHHHHHH-HTTHHHHHHHHTTCS-SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT---
T ss_pred             HHHHHHHHHcCChHHHHHHH-HCCCHHHHHHHHcCC-CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHc---
Confidence            88888899886688777776 567899999988743 3455789999999999999999999999999999999885   


Q ss_pred             cCCCCCCcHHHHHHhHHHHHHHhhC-ChhhHHHHHHhhhHHHHHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhh
Q 045086          262 SKDPKTSDEEEMLENLFDSLCCVLM-PLENKERFVKAEGVELMIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVL  339 (522)
Q Consensus       262 krDP~~~eE~E~mENlFd~Lcs~L~-~~~nk~~Fl~~EGveLM~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~  339 (522)
                        +    ...+...+...+|+.+.. .+.++..+.+..+++.++.+++... ..+..|+.+|-.-..+++.++..+++.+
T Consensus       139 --~----~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~  212 (252)
T 4hxt_A          139 --S----TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAG  212 (252)
T ss_dssp             --C----SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTT
T ss_pred             --C----CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC
Confidence              1    226688999999999987 5667789999999999999998764 6788889998887777788999999999


Q ss_pred             chhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhccCCCc
Q 045086          340 GLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGGILRG  385 (522)
Q Consensus       340 GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~l~~~  385 (522)
                      ++..|..++...            ..+.-++.+.+++.|..+-+..
T Consensus       213 ~i~~L~~ll~~~------------~~~v~~~a~~~L~~l~~~~~~~  246 (252)
T 4hxt_A          213 GVEVLQKLLTST------------DSEVQKEAQRALENIKSGGWLE  246 (252)
T ss_dssp             HHHHHHHGGGCS------------CHHHHHHHHHHHHHHHHTCBCC
T ss_pred             CHHHHHHHHCCC------------cHHHHHHHHHHHHHHHcCCCcc
Confidence            999988877432            2356788999999999876543
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct} Back     alignment and structure
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens} Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A Back     alignment and structure
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens} Back     alignment and structure
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio} Back     alignment and structure
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ... Back     alignment and structure
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A Back     alignment and structure
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24 Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A* Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster} Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens} Back     alignment and structure
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A Back     alignment and structure
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A Back     alignment and structure
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B* Back     alignment and structure
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B Back     alignment and structure
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus} Back     alignment and structure
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Back     alignment and structure
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Back     alignment and structure
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query522
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 98.78
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 98.71
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 98.67
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 98.51
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 98.5
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 98.47
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 98.24
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 98.2
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 98.2
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 97.75
d2bnxa1343 Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) { 88.36
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Importin alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=5.5e-05  Score=72.30  Aligned_cols=251  Identities=12%  Similarity=0.152  Sum_probs=179.4

Q ss_pred             cCChHHHHHhhcCCCchHHHHHHHHhhhhcccccccCCCchHHHHHHHHHhcChHHHHHHHhhhhcCCCCChhHHHHHHH
Q 045086          102 LNVIPSILGLLSHDNTDIAIDVVHLLQDLTDEDVLEDNDEPARVLVDALIENNVLELLVQNIQRLSDADSDPDEMAAVYN  181 (522)
Q Consensus       102 l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~Lv~aL~~~~~~~lLv~nL~RldE~~~~e~e~~gV~~  181 (522)
                      .+++..++..|.++|.+..+.++.-|..+.-.+..    .    -++.+++.+++..||+-|.+-       ++..-.+.
T Consensus        12 ~~~i~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~----~----~~~~i~~~g~i~~Lv~lL~~~-------~~~~v~~~   76 (434)
T d1q1sc_          12 NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQ----P----PIDNIIRAGLIPKFVSFLGKT-------DCSPIQFE   76 (434)
T ss_dssp             SCCHHHHHHHHTSSCHHHHHHHHHHHHHHHHSSSC----C----CHHHHHHTTCHHHHHHHTTCG-------GGHHHHHH
T ss_pred             hhhHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCC----c----hHHHHHHCCCHHHHHHHHccC-------CCHHHHHH
Confidence            46789999999999999999999999988532211    1    235667779999999988532       12234567


Q ss_pred             HHHHHHhhhccChhHHHHHhhhhchHHHHHhhccccCCChhhhhHHHHHHHHhcCChHHHHHhhhhchHHHHHHHHhhcc
Q 045086          182 TLATIENLIEVKPSVAELVCERTKLLRWLLGKIKVREFDSNKQYASEILAILLQNSTANQKRLGQMNGVDVLLQAVAMYK  261 (522)
Q Consensus       182 ~L~iiENl~e~~p~~a~~~~~~t~ll~wLL~Ri~~k~~d~Nk~YAsEiLaILLQ~s~~nr~~~~~~dGiD~LL~~la~Yr  261 (522)
                      +.+++-|+....+.....+. +.+.++.|++.++.. ...-+.+|...|+-|..+++.+|..+...+|++.|+..+..+.
T Consensus        77 a~~~L~~la~~~~~~~~~i~-~~~~i~~l~~~L~~~-~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~  154 (434)
T d1q1sc_          77 SAWALTNIASGTSEQTKAVV-DGGAIPAFISLLASP-HAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD  154 (434)
T ss_dssp             HHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSC
T ss_pred             HHHHHHHHhcCChhhhhHhh-hccchhhhhhccccC-CHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcc
Confidence            88999999987777666555 677999999988643 4455778999999999999999988888888888887665442


Q ss_pred             cC--------------------C-CCCC-----------------cHHHHHHhHHHHHHHhhCCh-hhHHHHHHhhhHHH
Q 045086          262 SK--------------------D-PKTS-----------------DEEEMLENLFDSLCCVLMPL-ENKERFVKAEGVEL  302 (522)
Q Consensus       262 kr--------------------D-P~~~-----------------eE~E~mENlFd~Lcs~L~~~-~nk~~Fl~~EGveL  302 (522)
                      ..                    . +...                 +..+...+..-||+.+...+ +.+..+....+++.
T Consensus       155 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~  234 (434)
T d1q1sc_         155 LSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQ  234 (434)
T ss_dssp             GGGSCHHHHHHHHHHHHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHH
T ss_pred             cccchHHHHHHHHHHHHHHhhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchh
Confidence            21                    1 1110                 01233344455555555433 45556777889999


Q ss_pred             HHHHHhcch-hhhhhhHHHHHHHhcCCcchhhhHHhhhchhhHHHhhhcCCCCcccccchhhhHHHHHHHHHHHHHHhcc
Q 045086          303 MIIIMKQKK-SAYASAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPVNKKNKKERYQEELEERLVSLIASLFGG  381 (522)
Q Consensus       303 M~lmlkekk-~sr~~AlKvLD~Al~~~~~~C~~fVe~~GLktlF~~FM~k~~~~k~~kk~~~~~e~eEhvisIiaSLlr~  381 (522)
                      ++.+++... ..+..|+++|-+-..+.+..+..+++.++++.+..++-..            ..+.-+..+.+++.|+.+
T Consensus       235 Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~------------~~~v~~~a~~~L~~l~~~  302 (434)
T d1q1sc_         235 LVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNP------------KTNIQKEATWTMSNITAG  302 (434)
T ss_dssp             HHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCS------------SHHHHHHHHHHHHHHTTS
T ss_pred             cccccccchhhhhhchhhhhhhHHhhhhHHHHHHHhccccchHHHhhccc------------chhhhHHHHHHHhhhccc
Confidence            999998764 5677889999877676777889999999999999887421            124456777788887664
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure