Citrus Sinensis ID: 045142

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRKIENPETNVRAAA
Secondary Structure (PSIPRED)
cccccEEEEEEcccccccccccEEEEEEcccccEEEEEccccccccccccccccEEEccEEEEEEccEEEEEEEEEEccccccEEEEEEEccccccccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccccccccccHHHHHHHHHHHHHHHHHEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEEEccccccccccEEEEEEEcccccEEEEEEEEcccccccccccccccccccEEEEcccEEEEEEEEEEccccccEEEEEEEcccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
MKPTRWVAWainptgkgmvgsqslvayrnpngilkaytspvmgygtnlqegnlsfqvpkisadfsnneMTIFATIvlpknmttvshvwqegpvrgdnhlgmhplggdnvksmgtldllsgkvtttkggtsgtlhFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGagtgiylgnkshgiqhstHRTIGILLLVLGFIQVLALklrpkkehkyRIWWNFYHHSVGYAIIILSIFNIfegfnilnpLKIWRLVYACILVALGAIAAILEVVTRVMVIRQrrkienpetnvraaa
Flexible Loop (DISEMBL)
mkptrwvawainptgkgmvgsQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIrqrrkienpetnvraaa
Low Complexity Region (SEG)
MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLsgkvtttkggtsgtLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYacilvalgaiaailevvTRVMVIRQRRKIENPETNVRAAA
Disordered region (IsUnstruct)
****RWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQ***************
Disordered Region (DISOPRED)
**PTRWVAWAINPTGKGMVGSQSLVAYRNPNGIL***********************PKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRV********************
Disordered Region (DISEMBL)
MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRKIEN*********
Disordered Region (DISPRO)
**PTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKV******TSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRR*************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRKIENPETNVRAAA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	316	2.2.26 [Sep-21-2011]
Q94BT2	252	Auxin-induced in root cul	no	no	0.325	0.408	0.4	2e-12
Q6ZNA5	592	Ferric-chelate reductase	yes	no	0.550	0.293	0.292	3e-07
A4QP81	573	Putative ferric-chelate r	yes	no	0.401	0.221	0.262	5e-05
Q8K385	592	Ferric-chelate reductase	yes	no	0.541	0.288	0.247	6e-05

>sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3

 Score = 73.9 bits (180), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 7/110 (6%)

Query: 6   WVAWAINPTGKGMVGSQSLVAYRNPNG---ILKAYTSPVMGYGTNLQEGNLSFQVPKISA 62
           WVAWAINPTG  M GSQ+ +AYR+  G   ++K Y   +  Y ++L EG L+F    + A
Sbjct: 79  WVAWAINPTGTKMAGSQAFLAYRSGGGAAPVVKTYN--ISSY-SSLVEGKLAFDFWNLRA 135

Query: 63  D-FSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKS 111
           +  S   + IF T+ +P    +V+ VWQ G    +   G+HP G DN+ S
Sbjct: 136 ESLSGGRIAIFTTVKVPAGADSVNQVWQIGGNVTNGRPGVHPFGPDNLGS 185

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZNA5|FRRS1_HUMAN Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS1 PE=2 SV=2

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 14/188 (7%)

Query: 127 GGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMK-----VFQSADPAWFYAH-IICQS 180
           GG+   L  K VHG +  V+W   + +G + AR+ K      F   + AWF  H ++  +
Sbjct: 362 GGSHSVLLLK-VHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFT 420

Query: 181 SAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWW 240
           +  L  IA     IY G  S    +  H  +G +++ L  +Q L    RP      R  +
Sbjct: 421 TTVLTCIAFVMPFIYRGGWSRHAGY--HPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMF 478

Query: 241 NFYHHSVGYAIIILSIFNIFEGFNI--LNPLKIWRLVYACILVALGAIAAILEVVTRVMV 298
           N+ H S+G A  I+++  +F G ++  LN    W+  YA  +    A     EVV  V  
Sbjct: 479 NWTHWSMGTAARIIAVAAMFLGMDLPGLNLPDSWK-TYA--MTGFVAWHVGTEVVLEVHA 535

Query: 299 IRQRRKIE 306
            R  RK+E
Sbjct: 536 YRLSRKVE 543

Ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|A4QP81|FRRS1_DANRE Putative ferric-chelate reductase 1 OS=Danio rerio GN=frrs1 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 137 QVHGIINAVSWGFLMPVGAITARYMKVFQSADPA-----WFYAHIICQS-SAYLLGIAGA 190
           + HG +  +SW     +G I ARY+K             WF AH+   + S     IA  
Sbjct: 368 KAHGCLMLISWMATGSIGMIIARYLKGVAKGQGCFGKDFWFVAHVSLMTLSIIATAIAFI 427

Query: 191 GTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYA 250
              +  G+ + G     H  +G L+++L  IQ +    R + +H+ R  +N+ H    +A
Sbjct: 428 IVFVSAGDWAGG----AHPVLGCLVMILSLIQPIVAAFRCEPQHERRFVFNWAHSCNAFA 483

Query: 251 IIILSIFNIFEGFNILN 267
           I  L++  IF G  +  
Sbjct: 484 IKCLAVAAIFTGLALFE 500

Putative ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1 OS=Mus musculus GN=FRRS1 PE=1 SV=1

 Score = 48.5 bits (114), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 19/190 (10%)

Query: 128 GTSGTLHFKQVHGIINAVSWGFLMPVGAITARYM-----KVFQSADPAWFYAH-IICQSS 181
           G S +    + HG +  V+W   + +G + AR+      K F   + AWF  H ++  ++
Sbjct: 362 GGSRSSPLLKAHGALMFVAWMTTVSIGVLVARFFRSVWSKAFFLREAAWFQVHRMLMVAT 421

Query: 182 AYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWN 241
           + L  +A     +Y G  S   +   H  +G  ++ L  +Q L    RP      R  +N
Sbjct: 422 SLLTCVAFVLPFVYRGGWSW--RAGYHPYLGCTVMTLAVLQPLLATFRPPLHDPRRQVFN 479

Query: 242 FYHHSVGYAIIILSIFNIF-----EGFNILNPLKIWRLVYACILVALGAIAAILEVVTRV 296
           + H SVG A  I+++  +F      G N+ +P K + ++   ++  +G      EV+  +
Sbjct: 480 WTHWSVGTAARIIAVAAMFLGMDLPGLNLPSPQKTYAMM-GFVVWHIGT-----EVILEI 533

Query: 297 MVIRQRRKIE 306
              R  RK+E
Sbjct: 534 HAYRLSRKVE 543

Ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
147798014	396	hypothetical protein VITISV_020872 [Viti	0.965	0.770	0.576	2e-99
359483457	396	PREDICTED: uncharacterized protein LOC10	0.965	0.770	0.576	2e-99
89257512	394	hypothetical protein 26.t00022 [Brassica	0.981	0.786	0.531	4e-95
225447614	394	PREDICTED: uncharacterized protein LOC10	0.955	0.766	0.555	1e-94
255581601	382	dopamine beta-monooxygenase, putative [R	0.949	0.785	0.562	3e-94
224137280	383	predicted protein [Populus trichocarpa]	0.952	0.785	0.555	4e-94
302141644	329	unnamed protein product [Vitis vinifera]	0.911	0.875	0.565	5e-91
15238124	395	putative auxin-responsive protein [Arabi	0.987	0.789	0.509	2e-90
13785207	400	putative membrane protein [Solanum tuber	0.968	0.765	0.521	2e-90
13785213	400	putative membrane protein [Solanum tuber	0.968	0.765	0.521	2e-90

>gi|147798014|emb|CAN65006.1| hypothetical protein VITISV_020872 [Vitis vinifera]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 177/307 (57%), Positives = 226/307 (73%), Gaps = 2/307 (0%)

Query: 6   WVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFS 65
           WVAWAIN    GMVGSQ+LVAYRNP+G +KAYTS V  Y T L E NLSF V  +SA +S
Sbjct: 75  WVAWAINLDSTGMVGSQALVAYRNPDGTIKAYTSSVDSYQTALSESNLSFPVSDLSATYS 134

Query: 66  NNEMTIFATIVLPKNMTTVSHVWQEGPVRGD-NHLGMHPLGGDNVKSMGTLDLLSGKVTT 124
           N+EM I+AT+ LP N TTV+ VWQ GP+    N  G+H   G NV+SMGTLDLLSG+  T
Sbjct: 135 NSEMIIYATLELPHNSTTVNQVWQHGPLSATTNTPGVHAFSGPNVQSMGTLDLLSGRSAT 194

Query: 125 TKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYL 184
              G S T + + +HG++NAVSWG LMP+GAI ARYM+VF+SADPAWFY H+ CQSSAY+
Sbjct: 195 APVGNSRTRN-RNIHGVLNAVSWGILMPIGAIIARYMRVFKSADPAWFYLHVTCQSSAYI 253

Query: 185 LGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYH 244
           +G+AG  TGI LG++S G+Q++ HR IGI+L  LG +QV AL LRPKK+HKYR +W+ YH
Sbjct: 254 IGVAGWATGIKLGSESSGVQYTAHRAIGIVLFCLGTLQVFALLLRPKKDHKYRFYWDIYH 313

Query: 245 HSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRK 304
           HSVGY +IILSI NI++GF+IL+P K W+  Y  ILVAL   A  LE  T  +V+++++ 
Sbjct: 314 HSVGYTVIILSIINIYKGFDILDPEKKWKRAYTGILVALALSAVFLEAFTWYIVLKRKKS 373

Query: 305 IENPETN 311
             + + N
Sbjct: 374 ARSGKXN 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483457|ref|XP_002267894.2| PREDICTED: uncharacterized protein LOC100246969 [Vitis vinifera]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 177/307 (57%), Positives = 226/307 (73%), Gaps = 2/307 (0%)

Query: 6   WVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFS 65
           WVAWAIN    GMVGSQ+LVAYRNP+G +KAYTS V  Y T L E NLSF V  +SA +S
Sbjct: 75  WVAWAINLDSTGMVGSQALVAYRNPDGTIKAYTSSVDSYQTALSESNLSFPVSDLSATYS 134

Query: 66  NNEMTIFATIVLPKNMTTVSHVWQEGPVRGD-NHLGMHPLGGDNVKSMGTLDLLSGKVTT 124
           N+EM I+AT+ LP N TTV+ VWQ GP+    N  G+H   G NV+SMGTLDLLSG+  T
Sbjct: 135 NSEMIIYATLELPHNSTTVNQVWQHGPLSATTNTPGVHAFSGPNVQSMGTLDLLSGRSAT 194

Query: 125 TKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYL 184
              G S T + + +HG++NAVSWG LMP+GAI ARYM+VF+SADPAWFY H+ CQSSAY+
Sbjct: 195 APVGNSRTRN-RNIHGVLNAVSWGILMPIGAIIARYMRVFKSADPAWFYLHVTCQSSAYI 253

Query: 185 LGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYH 244
           +G+AG  TGI LG++S G+Q++ HR IGI+L  LG +QV AL LRPKK+HKYR +W+ YH
Sbjct: 254 IGVAGWATGIKLGSESSGVQYTAHRAIGIVLFCLGTLQVFALLLRPKKDHKYRFYWDIYH 313

Query: 245 HSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRK 304
           HSVGY +IILSI NI++GF+IL+P K W+  Y  ILVAL   A  LE  T  +V+++++ 
Sbjct: 314 HSVGYTVIILSIINIYKGFDILDPEKKWKRAYTGILVALALSAVFLEAFTWYIVLKRKKS 373

Query: 305 IENPETN 311
             + + N
Sbjct: 374 ARSGKIN 380

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89257512|gb|ABD65002.1| hypothetical protein 26.t00022 [Brassica oleracea]

 Score =  353 bits (907), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 167/314 (53%), Positives = 230/314 (73%), Gaps = 4/314 (1%)

Query: 1   MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
           + P +WVAWA+NPT  GMVG+Q++VAY   +G ++AYTSP+  Y T+LQEG LSF V ++
Sbjct: 71  LSPGKWVAWAVNPTSTGMVGAQAIVAYPISDGTVRAYTSPISSYQTSLQEGELSFNVSEL 130

Query: 61  SADFSNNEMTIFATIVLP-KNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLS 119
           SA + NNEM +FAT+ LP  N   ++ VWQ+G + G N L  HP  G N++S+ TL+L+S
Sbjct: 131 SATYQNNEMIVFATLSLPLTNGGNINTVWQDGSLSG-NSLLPHPTSGSNIRSVSTLNLIS 189

Query: 120 GKVTTTKGGTSGTLHFKQ--VHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHII 177
           G   +T GG +G    K+  +HGI+NAVSWG +MP+GAI ARY++V +SA PAWFY H+ 
Sbjct: 190 GTSASTSGGGAGDSKLKKRNIHGILNAVSWGIMMPIGAIIARYLRVSKSAGPAWFYLHVT 249

Query: 178 CQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYR 237
           CQ+SAY++G+AG GTGI LG++S GIQ STHR IGI L  L  +QV A+ LRPK EHKYR
Sbjct: 250 CQASAYIIGVAGWGTGIKLGSESEGIQFSTHRAIGIALFCLATVQVFAMFLRPKPEHKYR 309

Query: 238 IWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVM 297
           ++WN YHH+VGY +I+L++ NIF+G +ILNP K WR  Y  I+V LG +AA+LE  T  +
Sbjct: 310 LYWNIYHHTVGYTVIVLAVVNIFKGLDILNPEKQWRNAYTAIIVTLGLVAAVLEGFTWYV 369

Query: 298 VIRQRRKIENPETN 311
           VI++ +  E+ +T+
Sbjct: 370 VIKRGKAEESSKTS 383

Source: Brassica oleracea

Species: Brassica oleracea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447614|ref|XP_002273270.1| PREDICTED: uncharacterized protein LOC100258038 [Vitis vinifera]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 169/304 (55%), Positives = 219/304 (72%), Gaps = 2/304 (0%)

Query: 1   MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
              T W+AWAIN    GMVG+QSLVAY N +    AYTSPV  Y T L  G+LSF VPKI
Sbjct: 69  FSSTNWIAWAINLNSTGMVGAQSLVAYVNSSAPY-AYTSPVSSYSTTLAPGSLSFSVPKI 127

Query: 61  SADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSG 120
            A+ SN EM I+AT+ L  ++TTV+ VWQEGP+ G    G H   G++V+SMGTLDLLSG
Sbjct: 128 EAENSNGEMIIYATLELSSSLTTVNQVWQEGPLSGGTP-GTHSTTGEHVQSMGTLDLLSG 186

Query: 121 KVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQS 180
           + +T    TS  +  + +HG++N VSWG LMP+GA+ ARYMKVFQ+ADPAWFY H+ CQS
Sbjct: 187 QTSTGGSATSSRVRRRNIHGVLNVVSWGTLMPLGAMIARYMKVFQAADPAWFYLHVACQS 246

Query: 181 SAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWW 240
           S Y++G+AG  TGI LG+ S  +Q+ THR +GI L  LG +Q+ AL LRP K+HKYR++W
Sbjct: 247 SGYIVGVAGWATGIKLGSDSSTVQYDTHRNVGITLFCLGTLQLFALLLRPNKDHKYRLYW 306

Query: 241 NFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIR 300
           N YHH++GY IIILSIFNIFEGF+IL+P + W+  Y  IL+ LG  A +LE  T  +VI+
Sbjct: 307 NIYHHAIGYCIIILSIFNIFEGFDILDPEEKWKRAYIGILIFLGFFAIMLEAATWYIVIK 366

Query: 301 QRRK 304
           ++R+
Sbjct: 367 RKRE 370

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581601|ref|XP_002531605.1| dopamine beta-monooxygenase, putative [Ricinus communis] gi|223528772|gb|EEF30780.1| dopamine beta-monooxygenase, putative [Ricinus communis]

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 171/304 (56%), Positives = 225/304 (74%), Gaps = 4/304 (1%)

Query: 1   MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
           +   RWVAWAINP+  GMVGSQ+LVAY+  +G +KAYTSPV GY T LQEG LSF V  +
Sbjct: 57  LSSDRWVAWAINPSSTGMVGSQALVAYQQSDGTMKAYTSPVNGYQTALQEGKLSFDVSDL 116

Query: 61  SADFSNNEMTIFATIVLPK-NMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLS 119
           SA + NNEM IFAT+ +     T+++ VWQEGP+ GD+   MH   G NV+SMGT+DLLS
Sbjct: 117 SATYGNNEMIIFATLDISNIGKTSINQVWQEGPLSGDSPQ-MHSTSGPNVQSMGTVDLLS 175

Query: 120 GKVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQ 179
           G V  +  G +     + +HG++NAVSWG +MP+GA+TARY+KVF+SADPAWFY H+ CQ
Sbjct: 176 GTVGAS--GRNDKTKKRNIHGVLNAVSWGIMMPLGALTARYLKVFKSADPAWFYLHVSCQ 233

Query: 180 SSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIW 239
           S+AY++G+AG  TG+ LG++S G+Q+  HRTIGI+L  LG +QV AL LRPK +HKYR +
Sbjct: 234 STAYIVGVAGWATGLKLGSESSGVQYDAHRTIGIILFCLGTLQVFALLLRPKPDHKYRFY 293

Query: 240 WNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVI 299
           WN YHH+VGY +I+LSI NIF+GF+ILNP K W+  Y  ++ AL   AA LE  T  +V+
Sbjct: 294 WNIYHHTVGYTVIVLSIINIFKGFDILNPAKKWKNAYIGVIAALALNAAWLEGYTWYIVV 353

Query: 300 RQRR 303
           ++RR
Sbjct: 354 KRRR 357

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137280|ref|XP_002322518.1| predicted protein [Populus trichocarpa] gi|222867148|gb|EEF04279.1| predicted protein [Populus trichocarpa]

 Score =  350 bits (899), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 169/304 (55%), Positives = 222/304 (73%), Gaps = 3/304 (0%)

Query: 1   MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
           +  +RWVAWAINPT  GM GSQ+LVAY+  +G ++AYTSP+  Y T+LQEG LSF V  +
Sbjct: 56  ITSSRWVAWAINPTSTGMAGSQALVAYQQTDGTMRAYTSPISSYQTSLQEGKLSFDVSDL 115

Query: 61  SADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSG 120
           SA  +NNE+ IFATI L    TTV+HVWQ+G V G N   +H   G NV+SMGTL+LLSG
Sbjct: 116 SATLANNEIIIFATIGLSNTSTTVNHVWQDGAVSG-NATQVHATSGANVQSMGTLNLLSG 174

Query: 121 KVTTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQS 180
           + ++T G  +  +  + +HG++NAVSWG LMP+GA  ARY+K F+SADPAWFY H+ CQS
Sbjct: 175 ESSSTGG--NDRIRKRNIHGVLNAVSWGILMPIGAFIARYLKAFKSADPAWFYLHVGCQS 232

Query: 181 SAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWW 240
            AY++G+AG GTG+ LG++S  IQ+  HRTIGI+L  LG +QV AL LRPK +HKYR +W
Sbjct: 233 IAYIVGVAGWGTGLKLGSESASIQYDAHRTIGIILFCLGTLQVFALLLRPKPDHKYRFYW 292

Query: 241 NFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIR 300
           N YHH VGY++IILSI NIF+GF+ILNP K W+  Y  ++ AL   A  LE  T  +V++
Sbjct: 293 NIYHHLVGYSVIILSIINIFKGFSILNPDKKWKNAYIGVIAALAFNAVWLEGYTWYLVVK 352

Query: 301 QRRK 304
           ++R 
Sbjct: 353 RKRS 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302141644|emb|CBI18775.3| unnamed protein product [Vitis vinifera]

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 164/290 (56%), Positives = 213/290 (73%), Gaps = 2/290 (0%)

Query: 23  SLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMT 82
           +LVAYRNP+G +KAYTS V  Y T L E NLSF V  +SA +SN+EM I+AT+ LP N T
Sbjct: 25  ALVAYRNPDGTIKAYTSSVDSYQTALSESNLSFPVSDLSATYSNSEMIIYATLELPHNST 84

Query: 83  TVSHVWQEGPVRGD-NHLGMHPLGGDNVKSMGTLDLLSGKVTTTKGGTSGTLHFKQVHGI 141
           TV+ VWQ GP+    N  G+H   G NV+SMGTLDLLSG+  T   G S T + + +HG+
Sbjct: 85  TVNQVWQHGPLSATTNTPGVHAFSGPNVQSMGTLDLLSGRSATAPVGNSRTRN-RNIHGV 143

Query: 142 INAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH 201
           +NAVSWG LMP+GAI ARYM+VF+SADPAWFY H+ CQSSAY++G+AG  TGI LG++S 
Sbjct: 144 LNAVSWGILMPIGAIIARYMRVFKSADPAWFYLHVTCQSSAYIIGVAGWATGIKLGSESS 203

Query: 202 GIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFE 261
           G+Q++ HR IGI+L  LG +QV AL LRPKK+HKYR +W+ YHHSVGY +IILSI NI++
Sbjct: 204 GVQYTAHRAIGIVLFCLGTLQVFALLLRPKKDHKYRFYWDIYHHSVGYTVIILSIINIYK 263

Query: 262 GFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRKIENPETN 311
           GF+IL+P K W+  Y  ILVAL   A  LE  T  +V+++++   + + N
Sbjct: 264 GFDILDPEKKWKRAYTGILVALALSAVFLEAFTWYIVLKRKKSARSGKIN 313

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238124|ref|NP_199564.1| putative auxin-responsive protein [Arabidopsis thaliana] gi|9758781|dbj|BAB09079.1| unnamed protein product [Arabidopsis thaliana] gi|46518427|gb|AAS99695.1| At5g47530 [Arabidopsis thaliana] gi|51971050|dbj|BAD44217.1| unknown protein [Arabidopsis thaliana] gi|332008146|gb|AED95529.1| putative auxin-responsive protein [Arabidopsis thaliana]

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/316 (50%), Positives = 226/316 (71%), Gaps = 4/316 (1%)

Query: 1   MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
           + P +WVAWA+NPT  GMVG+Q++VAY   +G ++AYTSP+  Y T+L E  LSF V ++
Sbjct: 71  LTPGKWVAWAVNPTSTGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQL 130

Query: 61  SADFSNNEMTIFATIVLP-KNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLS 119
           SA + NNEM I+A + LP  N   ++ VWQ+G + G+N L  HP  G+NV+S+ TL+L+S
Sbjct: 131 SATYQNNEMVIYAILNLPLANGGIINTVWQDGSLSGNNPLP-HPTSGNNVRSVSTLNLVS 189

Query: 120 GKV--TTTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHII 177
           G    T+T  G +  L  + +HGI+N VSWG +MP+GAI ARY+KV +SADPAWFY H+ 
Sbjct: 190 GASGSTSTGAGGASKLRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVF 249

Query: 178 CQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYR 237
           CQSSAY++G+AG  TG+ LGN+S GIQ + HR +GI L  L  IQV A+ LRPK EHKYR
Sbjct: 250 CQSSAYIIGVAGWATGLKLGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYR 309

Query: 238 IWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVM 297
           ++WN YHH+VGY++IIL++ N+F+G +IL+P K WR  Y  I+V LG +A +LE  T  +
Sbjct: 310 VYWNIYHHTVGYSVIILAVVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLEGFTWYV 369

Query: 298 VIRQRRKIENPETNVR 313
           VI++ +   + +T+ R
Sbjct: 370 VIKRGKAEASAKTSQR 385

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13785207|emb|CAC37355.1| putative membrane protein [Solanum tuberosum]

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 160/307 (52%), Positives = 215/307 (70%), Gaps = 1/307 (0%)

Query: 4   TRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISAD 63
           T WVAW +N  G  MVGSQ LVA+RN +G + AYTSPV  YGT L EG LSF VP+I A+
Sbjct: 76  TDWVAWGLNIDGTRMVGSQCLVAFRNSSGEIHAYTSPVSSYGTQLAEGALSFNVPRIGAE 135

Query: 64  FSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVT 123
           +SNNE  IFAT+ LP   T  +  WQ G V G   L  H   GDN++S G++D  +G++ 
Sbjct: 136 YSNNEFIIFATLELPAGRTNFNQAWQNGAVSGQ-ALTAHVQSGDNMRSFGSVDFANGELG 194

Query: 124 TTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAY 183
                 +     + VHG++NAVSWG LMP+GA+ ARY+KVF++A+PAWFY H+ CQ+SAY
Sbjct: 195 GGGSSVTSRQRRRNVHGVLNAVSWGVLMPMGAVFARYLKVFKAANPAWFYIHVACQTSAY 254

Query: 184 LLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFY 243
           ++G+AG GTG+ LG+ S GI+ +THR IGI L  LG +QV AL LRPK +HKYR++WN Y
Sbjct: 255 IVGVAGWGTGLKLGSDSTGIEFTTHRNIGITLFCLGTLQVFALLLRPKPDHKYRLYWNIY 314

Query: 244 HHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRR 303
           HH+VGYA+I L+I N+FEGF+ LN  K W+  Y  +++A+GAIA +LE  T  +VI++++
Sbjct: 315 HHAVGYAVISLAIANVFEGFDALNGQKNWKRAYTGVIIAIGAIAVLLEAFTWFIVIKRKK 374

Query: 304 KIENPET 310
              N  T
Sbjct: 375 TDSNKHT 381

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|13785213|emb|CAC37358.1| putative membrane protein [Solanum tuberosum]

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 160/307 (52%), Positives = 216/307 (70%), Gaps = 1/307 (0%)

Query: 4   TRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISAD 63
           T WVAW +N  G  MVGSQ LVA+RN +G + AYTSPV  YGT L EG LSF VP+I A+
Sbjct: 76  TDWVAWGLNIDGTRMVGSQCLVAFRNSSGEIHAYTSPVSSYGTQLAEGALSFNVPRIGAE 135

Query: 64  FSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGKVT 123
           +SNNE  IFAT+ LP   T+ +  WQ G V G   L  H   GDN++S G++D  +G++ 
Sbjct: 136 YSNNEFIIFATLELPAGRTSFNQAWQNGAVSGQ-ALTAHVQSGDNMRSFGSVDFANGELG 194

Query: 124 TTKGGTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAY 183
                 +     + VHGI+NAVSWG LMP+GA+ ARY+KVF++A+PAWFY H+ CQ+SAY
Sbjct: 195 GGGSSVTSRQRRRNVHGILNAVSWGVLMPMGAVFARYLKVFKAANPAWFYIHVACQTSAY 254

Query: 184 LLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFY 243
           ++G+AG GTG+ LG+ S GI+ +THR IGI L  LG +QV AL LRPK +HKYR++WN Y
Sbjct: 255 IVGVAGWGTGLKLGSDSTGIEFTTHRNIGITLFCLGTLQVFALLLRPKPDHKYRLYWNIY 314

Query: 244 HHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRR 303
           HH+VGYA+I L+I N+F+GF+ LN  K W+  Y  +++A+GAIA +LE  T  +VI++++
Sbjct: 315 HHAVGYAVISLAITNVFQGFDALNGQKNWKRAYTGVIIAIGAIAVLLEAFTWFIVIKRKK 374

Query: 304 KIENPET 310
              N  T
Sbjct: 375 TDSNKHT 381

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2077690	466	AT3G59070 [Arabidopsis thalian	0.870	0.590	0.507	1.2e-81
TAIR|locus:2168948	395	AT5G47530 [Arabidopsis thalian	0.987	0.789	0.471	9.7e-80
TAIR|locus:2130789	402	AT4G17280 [Arabidopsis thalian	0.949	0.746	0.470	5.5e-77
TAIR|locus:505006660	404	AT5G35735 "AT5G35735" [Arabido	0.848	0.663	0.496	4.4e-68
TAIR|locus:2090240	393	AT3G25290 "AT3G25290" [Arabido	0.949	0.763	0.435	4.5e-66
TAIR|locus:2123271	394	AT4G12980 "AT4G12980" [Arabido	0.949	0.761	0.413	4.5e-66
TAIR|locus:2156559	255	AT5G48750 [Arabidopsis thalian	0.560	0.694	0.477	5.4e-47
TAIR|locus:2049254	404	AT2G04850 [Arabidopsis thalian	0.822	0.643	0.360	5.6e-45
TAIR|locus:2091097	369	AT3G07570 [Arabidopsis thalian	0.424	0.363	0.459	1.8e-30
TAIR|locus:2076770	398	AT3G61750 [Arabidopsis thalian	0.433	0.344	0.415	8.7e-24

TAIR|locus:2077690 AT3G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 141/278 (50%), Positives = 201/278 (72%)

Query:     1 MKPTRWVAWAINPTGKGMVGSQSLVAYRNP-NGILKAYTSPVMGYGTNLQEGNLSFQVPK 59
             ++ + W++WAINPT KGMVG+Q+LVAYRN  +G+++AYTS +  Y   LQE  LS +V +
Sbjct:    81 LESSSWISWAINPTSKGMVGAQALVAYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQ 140

Query:    60 ISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLX 119
             +SA++SN EM IFAT+VLP N T V+H+WQ+GP++  + LGMH + GDN+KSM +LDLL 
Sbjct:   141 VSAEYSNGEMMIFATLVLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLLS 200

Query:   120 XXXXXXXXXXXXXLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQ 179
                          L  KQ+H I+NA+SWG LMP+G + ARYMK ++  DP WFY H++CQ
Sbjct:   201 GQVTTTKSVNRNMLLVKQIHAIVNALSWGILMPIGVMAARYMKNYEVLDPTWFYIHVVCQ 260

Query:   180 SSAYLLG-IAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRI 238
             ++ Y  G I G GT IY+   + G++ + H  IG+LL  LGF+Q+L+LK RP K+HKYR 
Sbjct:   261 TTGYFSGLIGGLGTAIYMARHT-GMRTTLHTVIGLLLFALGFLQILSLKARPNKDHKYRK 319

Query:   239 WWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVY 276
             +WN+YHH++GY +I+LSI+NI++G +IL P  IW++ Y
Sbjct:   320 YWNWYHHTMGYIVIVLSIYNIYKGLSILQPGSIWKIAY 357

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2168948 AT5G47530 [Arabidopsis thaliana (taxid:3702)]

 Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
 Identities = 149/316 (47%), Positives = 209/316 (66%)

Query:     1 MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
             + P +WVAWA+NPT  GMVG+Q++VAY   +G ++AYTSP+  Y T+L E  LSF V ++
Sbjct:    71 LTPGKWVAWAVNPTSTGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQL 130

Query:    61 SADFSNNEMTIFATIVLP-KNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLX 119
             SA + NNEM I+A + LP  N   ++ VWQ+G + G+N L  HP  G+NV+S+ TL+L+ 
Sbjct:   131 SATYQNNEMVIYAILNLPLANGGIINTVWQDGSLSGNNPLP-HPTSGNNVRSVSTLNLVS 189

Query:   120 XXXXXXXXXX--XXXLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHII 177
                            L  + +HGI+N VSWG +MP+GAI ARY+KV +SADPAWFY H+ 
Sbjct:   190 GASGSTSTGAGGASKLRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVF 249

Query:   178 CQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYR 237
             CQSSAY++G+AG  TG+ LGN+S GIQ + HR +GI L  L  IQV A+ LRPK EHKYR
Sbjct:   250 CQSSAYIIGVAGWATGLKLGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYR 309

Query:   238 IWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYXXXXXXXXXXXXXXXXXTRVM 297
             ++WN YHH+VGY++IIL++ N+F+G +IL+P K WR  Y                 T  +
Sbjct:   310 VYWNIYHHTVGYSVIILAVVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLEGFTWYV 369

Query:   298 VIRQRRKIENPETNVR 313
             VI++ +   + +T+ R
Sbjct:   370 VIKRGKAEASAKTSQR 385

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2130789 AT4G17280 [Arabidopsis thaliana (taxid:3702)]

 Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
 Identities = 144/306 (47%), Positives = 203/306 (66%)

Query:     5 RWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADF 64
             +WVAWA+NPT  GMVG+Q++VAY   +G ++ YTSP+  Y T+L EG+LSF V  +SA +
Sbjct:    82 KWVAWAVNPTSTGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSGLSATY 141

Query:    65 SNNEMTIFATIVLPKNMT---TVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLXXX 121
              NNE+ + A++ L +++    T++ VWQ+G + G N L  HP  G+NV+S+ TL+L+   
Sbjct:   142 QNNEIVVLASLKLAQDLGNGGTINTVWQDGSMSG-NSLLPHPTSGNNVRSVSTLNLVSGV 200

Query:   122 XXXXXXXXXXX-LHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQS 180
                         L  + +HGI+N VSWG +MP+GAI ARY++V +SADPAWFY H+ CQ+
Sbjct:   201 SAAAGGAGGSSKLRKRNIHGILNGVSWGIMMPLGAIIARYLRVAKSADPAWFYIHVFCQA 260

Query:   181 SAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWW 240
             SAY++G+AG  TG+ LG  S GIQ+STHR IGI L  L  +QV A+ LRPK EHK+R++W
Sbjct:   261 SAYIIGVAGWATGLKLGGDSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYW 320

Query:   241 NFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYXXXXXXXXXXXXXXXXXTRVMVIR 300
             N YHH++GY IIIL + N+F+G  IL+P K W+  Y                 T  +VI+
Sbjct:   321 NIYHHTIGYTIIILGVVNVFKGLGILSPKKQWKNAYIGIIVVLAIVATLLEAFTWYVVIK 380

Query:   301 QRRKIE 306
              RRK+E
Sbjct:   381 -RRKLE 385

GO:0005576 "extracellular region" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:505006660 AT5G35735 "AT5G35735" [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 135/272 (49%), Positives = 172/272 (63%)

Query:     6 WVAWAINPTGKGMVGSQSLVAYRNPN-GILKAYTSPVMGYGTNLQEGNLSFQVPKISADF 64
             WVAW +NP+   MVG+Q+LVA+ N      +AYTS V  YGT L+  +LSF V  +SA  
Sbjct:    78 WVAWGLNPSSTQMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATL 137

Query:    65 SNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLXXXXXX 124
              + E+TIFAT+ L  N+ T + +WQ GPV  +     H   GDN++S G +D        
Sbjct:   138 VSGEVTIFATLELSPNLITANQLWQVGPVV-NGVPASHQTSGDNMRSSGRIDFRTGQASA 196

Query:   125 XXXXXXXXLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYL 184
                     L  +  HG++NAVSWG LMP+GA+ ARYMKVF  ADP WFY HI  Q S Y+
Sbjct:   197 GGGGSGDRLRKRNTHGVLNAVSWGVLMPMGAMMARYMKVF--ADPTWFYLHIAFQVSGYV 254

Query:   185 LGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYH 244
             +G+AG  TGI LGN S G  +STHR +GI L     +QV AL +RPK +HKYR +WN YH
Sbjct:   255 IGVAGWATGIKLGNDSPGTSYSTHRNLGIALFTFATLQVFALLVRPKPDHKYRTYWNVYH 314

Query:   245 HSVGYAIIILSIFNIFEGFNILNPLKIWRLVY 276
             H+VGY  IILSI NIF+GF+IL+P   WR  Y
Sbjct:   315 HTVGYTTIILSIVNIFKGFDILDPEDKWRWAY 346

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2090240 AT3G25290 "AT3G25290" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 136/312 (43%), Positives = 185/312 (59%)

Query:     2 KPTRWVAWAINPTGKGMVGSQSLVAYRNP-NGILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
             KP  W+AWAINP   GMVGSQ+LVAY++P NG+    T  +  Y ++L    L+F V  +
Sbjct:    73 KPGGWIAWAINPKATGMVGSQTLVAYKDPGNGVAVVKTLNISSY-SSLIPSKLAFDVWDM 131

Query:    61 SADFSNNE---MTIFATIVLPKNMTT---VSHVWQEGPVRGDNHL-GMHPLGGDNVKSMG 113
              A+ +  +   + IFA + +P ++     V+ VWQ GP  G   + G H     N+ SM 
Sbjct:   132 KAEEAARDGGSLRIFARVKVPADLVAKGKVNQVWQVGPELGPGGMIGRHAFDSANLASMS 191

Query:   114 TLDLLXXXXXXXXXXXX---XXLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPA 170
             +LDL                  +  + +HGI+NAVSWG L P+GAI ARYM+VF SADPA
Sbjct:   192 SLDLKGDNSGGTISGGDEVNAKIKNRNIHGILNAVSWGILFPIGAIIARYMRVFDSADPA 251

Query:   171 WFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRP 230
             WFY H+ CQ SAY++G+AG  TG+ LGN+S GI+ S HR IGI L  L  IQ+ A+ LRP
Sbjct:   252 WFYLHVSCQFSAYVIGVAGWATGLKLGNESEGIRFSAHRNIGIALFTLATIQMFAMLLRP 311

Query:   231 KKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYXXXXXXXXXXXXXX 290
             KK+HKYR +WN YHH VGYAI+ L I N+F+G NIL P   ++  Y              
Sbjct:   312 KKDHKYRFYWNIYHHGVGYAILTLGIINVFKGLNILKPQDTYKTAYIAVIAVLGGIALLL 371

Query:   291 XXXTRVMVIRQR 302
                T V+V++++
Sbjct:   372 EAITWVVVLKRK 383

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2123271 AT4G12980 "AT4G12980" [Arabidopsis thaliana (taxid:3702)]

 Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
 Identities = 129/312 (41%), Positives = 191/312 (61%)

Query:     2 KPTRWVAWAINPTGKGMVGSQSLVAYRNPN-GILKAYTSPVMGYGTNLQEGNLSFQVPKI 60
             KP  W+AWAINP   GM GSQ+LVA ++P+ G+    T  ++ Y ++L    LSF V  +
Sbjct:    74 KPGGWIAWAINPKSTGMAGSQALVASKDPSTGVASVTTLNIVSY-SSLVPSKLSFDVWDV 132

Query:    61 SADFSNNE---MTIFATIVLPKNMTT---VSHVWQEGPVRGDNHLGMHPLGGDNVKSMGT 114
              A+ + N+   + IFA + +P ++     V+ VWQ GP   +  +  H   G N+ S+G+
Sbjct:   133 KAEEAANDGGALRIFAKVKVPADLAASGKVNQVWQVGPGVSNGRIQAHDFSGPNLNSVGS 192

Query:   115 LDLLXXX----XXXXXXXXXXXLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPA 170
             LDL                   +H + +HGI+NAVSWG L P+GA+ ARYM++F+SADPA
Sbjct:   193 LDLTGTTPGVPVSGGGGAGNSRIHKRNIHGILNAVSWGLLFPIGAMIARYMRIFESADPA 252

Query:   171 WFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRP 230
             WFY H+ CQ SAY++G+AG  TG+ LG++S GIQ++THR IGI L  +  +Q+ A+ LRP
Sbjct:   253 WFYLHVSCQFSAYVIGVAGWATGLKLGSESKGIQYNTHRNIGICLFSIATLQMFAMLLRP 312

Query:   231 KKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYXXXXXXXXXXXXXX 290
             +K+HK+R  WN YHH VGY+I+IL I N+F+G +ILNP   ++  Y              
Sbjct:   313 RKDHKFRFVWNIYHHGVGYSILILGIINVFKGLSILNPKHTYKTAYIAVIGTLGGITLLL 372

Query:   291 XXXTRVMVIRQR 302
                T V+V++++
Sbjct:   373 EVVTWVIVLKRK 384

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2156559 AT5G48750 [Arabidopsis thaliana (taxid:3702)]

 Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
 Identities = 85/178 (47%), Positives = 123/178 (69%)

Query:     1 MKPTRWVAWAINPTGKGMVGSQSLVAYRNP-NGILKAYTSPVMGYGTNLQEGNLSFQVPK 59
             ++ + W+AW INPT KGM+G+Q+L+AYRN  +G ++AYTS + GY   LQEG LSF+V +
Sbjct:    78 IESSSWIAWGINPTSKGMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQ 137

Query:    60 ISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLX 119
             +SA++ N EMTIFAT+V P N T V+H+WQ+GP++  + LGMH + G+++KSM  LDLL 
Sbjct:   138 LSAEYLNREMTIFATMVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSMANLDLLS 197

Query:   120 XXXXXXXXXXXXXLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHII 177
                          L  K +HG++NAV WG  +P+G + ARYM+ ++  DP WFY  I+
Sbjct:   198 GQVMTTKAANDNMLLVKSIHGLVNAVCWGIFIPIGVMAARYMRTYKGLDPTWFYILIL 255

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0030198 "extracellular matrix organization" evidence=ISS

TAIR|locus:2049254 AT2G04850 [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
 Identities = 103/286 (36%), Positives = 149/286 (52%)

Query:     1 MKPTRWVAWAINPTGKG-MVGSQSLVAYRNPNG---ILKAYTSPVMGYGTNLQEGNLS-- 54
             + P+ WV W INP     M GS+ L+A+ +PN    IL  Y   V+     LQ+G L   
Sbjct:    67 ISPSGWVGWGINPDSPAQMTGSRVLIAFPDPNSGQLILLPY---VLDSSVKLQKGPLLSR 123

Query:    55 ----FQVPKISADFSNNEMT---------IFATIVLPKNMTTVSHVWQEGP-VRGDNHLG 100
                  ++   SA     +M          I+A++ L  N T + HVW  G  V+G +   
Sbjct:   124 PLDLVRLSSSSASLYGGKMATIRNGASVQIYASVKLSSNNTKIHHVWNRGLYVQGYSPT- 182

Query:   101 MHPLGGDNVKSMGTLDLLXXXXXXXXXXXXXXLHFKQVHGIINAVSWGFLMPVGAITARY 160
             +HP    ++ S  T D+               L  K  HG++NA+SWGFL+P GA+TARY
Sbjct:   183 IHPTTSTDLSSFSTFDVTSGFATVNQNSGSRAL--KVTHGVVNAISWGFLLPAGAVTARY 240

Query:   161 MKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGF 220
             ++  QS  P WFY H   Q + +LLG  G   GI LG+ S G+ +  HR++GI       
Sbjct:   241 LRQMQSIGPTWFYIHAAIQLTGFLLGTIGFSIGIVLGHNSPGVTYGLHRSLGIATFTAAA 300

Query:   221 IQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNIL 266
             +Q LAL  RPK  +K+R +W  YHH VGYA +++ + N+F+GF +L
Sbjct:   301 LQTLALLFRPKTTNKFRRYWKSYHHFVGYACVVMGVVNVFQGFEVL 346

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2091097 AT3G07570 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 63/137 (45%), Positives = 90/137 (65%)

Query:   136 KQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIY 195
             K+ HG++N   WG L+ VGAI AR+MK +   DP WFYAHI  Q++ +LLG+ G   G+ 
Sbjct:   210 KKTHGLMNMFGWGILIIVGAIVARHMKQW---DPTWFYAHIALQTTGFLLGLTGVICGLV 266

Query:   196 LGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILS 255
             L N+      S H+ +GI +LV+G +Q+LAL  RP K+ KYR +WN+YHH++G  +IIL+
Sbjct:   267 LENRLKANNVSKHKGLGITILVMGVLQMLALLARPDKQSKYRKYWNWYHHNIGRLLIILA 326

Query:   256 IFNIFEGFNILNPLKIW 272
             I NIF G ++      W
Sbjct:   327 ISNIFYGIHLAKAGTSW 343

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2076770 AT3G61750 [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 59/142 (41%), Positives = 80/142 (56%)

Query:   136 KQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIY 195
             K  HG++  + WGFL+PVGAI ARY++     DP W+Y HI  Q + ++ G+A    GI 
Sbjct:   217 KTKHGVMAILGWGFLLPVGAILARYLR---HKDPLWYYLHIGFQFTGFIFGLAAVILGIQ 273

Query:   196 LGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILS 255
             L N+        HR IGI LLVL  +QVLA   RP+KE K R +WN+YHH +G   +   
Sbjct:   274 LYNRIQP-DIPAHRGIGIFLLVLSTLQVLAFFARPQKETKMRRYWNWYHHWIGRISLFFG 332

Query:   256 IFNIFEGFNIL-NPLKIWRLVY 276
               NI  G  +  N    W++ Y
Sbjct:   333 AVNIVLGIRMADNGGDGWKIGY 354

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
cd09629	152	cd09629, DOMON_CIL1_like, DOMON-like domain of Bra	5e-52
cd08760	191	cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrom	3e-48
pfam04526	101	pfam04526, DUF568, Protein of unknown function (DU	1e-42
smart00665	129	smart00665, B561, Cytochrome b-561 / ferric reduct	2e-31
smart00664	148	smart00664, DoH, Possible catecholamine-binding do	2e-12

>gnl|CDD|187687 cd09629, DOMON_CIL1_like, DOMON-like domain of Brassica carinata CIL1 and similar proteins

 Score =  167 bits (426), Expect = 5e-52
 Identities = 61/118 (51%), Positives = 77/118 (65%)

Query: 2   KPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKIS 61
             + WVAW INPTG GMVG+Q+LVA+RN NG +  YT  +  Y    +   LSF V  +S
Sbjct: 35  SSSGWVAWGINPTGTGMVGTQALVAFRNSNGSVLVYTYNITSYTKLGEPLPLSFDVSDLS 94

Query: 62  ADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLS 119
           A++S  EMTIFAT+ LP N+T+V+HVWQ GP       G HP  G N+ S GTLDLL+
Sbjct: 95  AEYSGGEMTIFATLKLPSNLTSVNHVWQVGPAVTGGSPGPHPTSGANLASKGTLDLLT 152

Brassica carinata CIL1 has been described as involved in suppression of axillary meristem development. It contains a single DOMON domain, the function of which is unclear. Members in this diverse family of plant proteins may have a cytochrome b561 domain C-terminal to the DOMON domain, some members from Arabidopsis have been characterized as auxin-responsive or auxin-induced proteins. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases. Length = 152

>gnl|CDD|176490 cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrome b(561), including the FRRS1 gene product

 Score =  159 bits (405), Expect = 3e-48
 Identities = 68/193 (35%), Positives = 96/193 (49%), Gaps = 13/193 (6%)

Query: 110 KSMGTLDLLSGKVTTTKGGTSGTL--------HFKQVHGIINAVSWGFLMPVGAITARYM 161
           KS  +LDL SG  ++                    + HG++ A++WG LMP+GA+ ARY 
Sbjct: 2   KSSYSLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARYF 61

Query: 162 KVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFI 221
                 DP WFY H   Q  A LL IAG   GI L     G  ++ H  +GI++L L  +
Sbjct: 62  L---LGDPVWFYLHAGLQLLAVLLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAIL 118

Query: 222 QVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNP--LKIWRLVYACI 279
           Q L   LRP    K R  WN+ H  +G A +IL+I NIF G ++      K W++ Y  +
Sbjct: 119 QPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLGLDLAGAGTPKAWKIAYGVV 178

Query: 280 LVALGAIAAILEV 292
           +  L  +  ILE+
Sbjct: 179 VAVLALVYLILEI 191

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 191

>gnl|CDD|191019 pfam04526, DUF568, Protein of unknown function (DUF568)

 Score =  142 bits (359), Expect = 1e-42
 Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 1/101 (0%)

Query: 18  MVGSQSLVAYRNPN-GILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIV 76
           MVGSQ+LVA+R+ + G ++ YTS +  Y T+LQEG LSF VP +SA+ SN E+TIFAT+ 
Sbjct: 1   MVGSQALVAFRDSSSGAVRVYTSNISSYSTSLQEGPLSFDVPDLSAEESNGEVTIFATLK 60

Query: 77  LPKNMTTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDL 117
           LP N T V+ VWQ GPV      G+HP  GDN++SMGTLDL
Sbjct: 61  LPANTTKVNQVWQVGPVVTGGSPGIHPTSGDNLRSMGTLDL 101

Family of uncharacterized plant proteins. Length = 101

>gnl|CDD|214769 smart00665, B561, Cytochrome b-561 / ferric reductase transmembrane domain

 Score =  113 bits (286), Expect = 2e-31
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 5/130 (3%)

Query: 138 VHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLG 197
           +H ++  + +GFLM    + AR       + P WF  H++ Q  A +LG+ G        
Sbjct: 1   LHPVLMILGFGFLMGEAILVARP-LTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISH 59

Query: 198 NKSHG-IQHSTHRTIGILLLVLGFIQVLALKLRPKKE---HKYRIWWNFYHHSVGYAIII 253
           N+S     +S H  +G+   VL  +Q L+  LRP       KYR + N YH  VG A  I
Sbjct: 60  NESGIANFYSLHSWLGLAAFVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFI 119

Query: 254 LSIFNIFEGF 263
           L+I  IF G 
Sbjct: 120 LAIVTIFLGL 129

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders. Length = 129

>gnl|CDD|214768 smart00664, DoH, Possible catecholamine-binding domain present in a variety of eukaryotic proteins

 Score = 63.6 bits (155), Expect = 2e-12
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 15/125 (12%)

Query: 5   RWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQV-PKISAD 63
            WVA   +P G+ M G+  +VA+ + NG +        GYG  ++  +    V   +SA 
Sbjct: 28  GWVAIGFSPDGQ-MAGADVVVAWVDNNGRVTVKDYYTPGYGPPVE--DDQQDVTDLLSAT 84

Query: 64  FSNNEMTIFATIVL----PKNM----TTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTL 115
           + N  +T      L    P +      TV  +W +GP+  +  LG H     ++KS   +
Sbjct: 85  YENGVLTCRFRRKLGSNDPDDKSLLDGTVHVLWAKGPLSPNGGLGYH---DFSLKSTKKV 141

Query: 116 DLLSG 120
            L S 
Sbjct: 142 CLSSC 146

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press). Length = 148

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	100.0
KOG4293	403	consensus Predicted membrane protein, contains DoH	100.0
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	99.93
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	99.9
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	99.89
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	99.86
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	99.86
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	99.84
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	99.84
PLN02351	242	cytochromes b561 family protein	99.83
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	99.82
PLN02810	231	carbon-monoxide oxygenase	99.81
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	99.81
PLN02680	232	carbon-monoxide oxygenase	99.8
KOG1619	245	consensus Cytochrome b [Energy production and conv	99.76
smart00664	148	DoH Possible catecholamine-binding domain present	99.74
PF04526	101	DUF568: Protein of unknown function (DUF568); Inte	99.69
PF03351	124	DOMON: DOMON domain; InterPro: IPR005018 The DOMON	99.54
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	99.44
cd00241	184	CDH_cytochrome Cellobiose dehydrogenase (Cellobios	99.38
KOG3568	603	consensus Dopamine beta-monooxygenase [Amino acid	98.36
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	97.29
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	97.13
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	97.09
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	97.09
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	97.0
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	96.97
PLN02680	232	carbon-monoxide oxygenase	96.91
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	96.91
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	96.87
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	96.69
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	96.53
PLN02351	242	cytochromes b561 family protein	96.47
KOG1619	245	consensus Cytochrome b [Energy production and conv	96.3
PLN02810	231	carbon-monoxide oxygenase	96.29
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	95.96
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	95.1
COG2717	209	Predicted membrane protein [Function unknown]	93.97
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	93.65
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	93.55
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	93.31
COG5658	204	Predicted integral membrane protein [Function unkn	92.82
PF13172	34	PepSY_TM_1: PepSY-associated TM helix	91.37
PF10951	347	DUF2776: Protein of unknown function (DUF2776); In	91.14
PF10067	103	DUF2306: Predicted membrane protein (DUF2306); Int	91.07
PF01292	182	Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPr	90.13
PRK05419	205	putative sulfite oxidase subunit YedZ; Reviewed	89.94
PF01292	182	Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPr	88.97
COG3038	181	CybB Cytochrome B561 [Energy production and conver	88.05
TIGR02125	211	CytB-hydogenase Ni/Fe-hydrogenase, b-type cytochro	86.01
PF13706	37	PepSY_TM_3: PepSY-associated TM helix	85.78
PF01794	125	Ferric_reduct: Ferric reductase like transmembrane	85.71
PRK11513	176	cytochrome b561; Provisional	85.09
PF13630	76	SdpI: SdpI/YhfL protein family	80.81
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	80.27

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=100.00  E-value=2e-32  Score=239.45  Aligned_cols=178  Identities=37%  Similarity=0.650  Sum_probs=153.0

Q ss_pred             ceEEeeccCceecccC--------CCCCcchhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHH
Q 045142          112 MGTLDLLSGKVTTTKG--------GTSGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAY  183 (316)
Q Consensus       112 ~~~ldl~~g~~~~~~~--------s~~~~~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~  183 (316)
                      +.++|++++++++.+.        +.++.+..+++||++|++||++++|+|++++||++.   .++.||++|+.+|++++
T Consensus         4 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~~---~~~~~~~~H~~~q~~~~   80 (191)
T cd08760           4 SYSLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARYFLL---GDPVWFYLHAGLQLLAV   80 (191)
T ss_pred             ceEEEeccceeccCCCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCchhHHHHHHHHHHHH
Confidence            5677888877543211        112346789999999999999999999999999743   47889999999999999


Q ss_pred             HHHHHHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q 045142          184 LLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGF  263 (316)
Q Consensus       184 ~~~~~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~  263 (316)
                      +++++|+++++..........++.|+++|+++++++++|++.|++||.+..+.|+.++++|+++|++++++|++|+++|+
T Consensus        81 ~~~i~g~~~~~~~~~~~~~~~~~~H~~lGl~~~~l~~lQ~~~G~~~~~~~~~~R~~~~~~H~~~G~~~~~l~~v~i~~G~  160 (191)
T cd08760          81 LLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAILQPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLGL  160 (191)
T ss_pred             HHHHHHHHHHHHhhccCCCCCcCcchhhhHHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999864122233579999999999999999999999999988889999999999999999999999999999


Q ss_pred             cccCCC--CchhhhHHHHHHHHHHHHHHHHH
Q 045142          264 NILNPL--KIWRLVYACILVALGAIAAILEV  292 (316)
Q Consensus       264 ~~~~~~--~~~~~~~~~~~~~~~~~~~~lev  292 (316)
                      .+.+.+  +.+.++|.++++++.++++++|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  191 (191)
T cd08760         161 DLAGAGTPKAWKIAYGVVVAVLALVYLILEI  191 (191)
T ss_pred             HHhcCCcccchhhHHHHHHHHHHHHHHHHcC
Confidence            999877  77889999999999999888873

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>KOG4293 consensus Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-35  Score=282.61  Aligned_cols=309  Identities=44%  Similarity=0.739  Sum_probs=256.4

Q ss_pred             CceEEEEECCCCCCCCCCcEEEEEEcC-CCcEEEEEeeecccccccCCCCccceeccceeEeeCCE---EEEEEEEecC-
Q 045142            4 TRWVAWAINPTGKGMVGSQSLVAYRNP-NGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNE---MTIFATIVLP-   78 (316)
Q Consensus         4 ~gWva~GfS~~g~~M~gsd~vI~~~~~-~G~v~v~~~~~~g~~~p~~~~~~~~~l~~~s~~~~~g~---~t~~f~~~l~-   78 (316)
                      ..|++++++|++.+|.++.++|+|.++ +|...+.++...++.+...+....+++.+....+....   ..++++.+++ 
T Consensus        70 ~~w~~~~~~p~~t~m~~~~~~va~~~~~~g~~~~~t~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~l~~  149 (403)
T KOG4293|consen   70 SAWVAWAINPTGTGMVGSRALVAYAGSSSGATTVKTYVILGYSPSLVPALLSFTLGNVRAECNLRSSSPIGIFASFKLAG  149 (403)
T ss_pred             ccccccccCCccccccccceeeeeeccccchhhceeeeecccchhhcccccceeeecCcchhhccCCCCceEEEEEEeec
Confidence            349999999998889999999999985 67778888888887654334444555555555443333   6678888888 


Q ss_pred             CCCCceeEEeeecCCCC-CCCCCCCCCCCCCCccceEEeeccCceec--cc--CCCCCcchhhHhhHHHHHHHHHHHHHH
Q 045142           79 KNMTTVSHVWQEGPVRG-DNHLGMHPLGGDNVKSMGTLDLLSGKVTT--TK--GGTSGTLHFKQVHGIINAVSWGFLMPV  153 (316)
Q Consensus        79 ~~~~~~~~IwA~G~~~~-~~~l~~H~~~~~~~~s~~~ldl~~g~~~~--~~--~s~~~~~~~~~~Hg~lm~~aw~~l~p~  153 (316)
                      .+.+.++.+|+.|+... +.++.+|...+.+..+...+|++...++.  ++  ....+..++...||++|.++|++++|+
T Consensus       150 ~~~~~~~~~w~~~~~~~~g~~~~~h~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~hgil~~~sw~il~p~  229 (403)
T KOG4293|consen  150 ANGGKYSAVWQVGPTGSGGGRPKRHKLSGSNLASVTSLDLTSDIGELSITSEGNFNSSGLKLRMTHGILNALSWGILFPA  229 (403)
T ss_pred             CCCceeEEEEEccCCccCCCCCccCccccCCccceeecccccccccccccccCcccCcchhccccHHHHhhhhhheeccc
Confidence            56778999999998753 68899999988766666667777643322  11  112344556667999999999999999


Q ss_pred             HHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCC
Q 045142          154 GAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKE  233 (316)
Q Consensus       154 gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~  233 (316)
                      |++.+||+|..+...+.||++|+.+|..++++.+.|+..+....+++.+..++.|..+|+.++++.++|++..++||.+.
T Consensus       230 g~i~ary~~~~~~~~~~Wfy~H~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~h~~~G~~~~~l~~lQ~~~~l~Rp~~~  309 (403)
T KOG4293|consen  230 GAIIARYLRQKPSGDPTWFYIHRACQFTGFILGVAGFVDGLKLSNESDGTVYSAHTDLGIILLVLAFLQPLALLLRPLPE  309 (403)
T ss_pred             cceeEEEecccCCCCcchhhhhhhheeeEEEEEeeeeeeeEEEccCCCceeeeecccchhHHHHHHHHHHHHHHhcCCcc
Confidence            99999999997767899999999999999999999999998887776666679999999999999999999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchh-hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCccchh
Q 045142          234 HKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWR-LVYACILVALGAIAAILEVVTRVMVIRQRRKIENPETNV  312 (316)
Q Consensus       234 ~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~lev~~~~~~~~~~~~~~~~~~~~  312 (316)
                      ++.|++||++|+..||..+++|++|++.|+.+.++...|. ++|+.+.+.+..+.+++|+.+|....+|.+..+.+++.-
T Consensus       310 ~k~R~~~nwyH~~~g~~~~~~~~~~i~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~  389 (403)
T KOG4293|consen  310 SKIRRYWNWYHHLVGRLSIILGIVNIFDGLELLYPGQSWIKLGYGSILAVLGLIAVILEILSWRITIERPSPSSMSRTST  389 (403)
T ss_pred             cCceeccceeeeecCcceeeehhhHHhhhHhhhcCCCceEEeeeeeEEEEechhhhhhhhheeeeeecccCccccccccc
Confidence            9999999999999999999999999999999999999998 799999999999999999999999888888777666543

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=99.93  E-value=4e-26  Score=187.41  Aligned_cols=124  Identities=35%  Similarity=0.527  Sum_probs=110.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHh-hcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-CccccccchhhHHH
Q 045142          138 VHGIINAVSWGFLMPVGAITARY-MKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTIGILL  215 (316)
Q Consensus       138 ~Hg~lm~~aw~~l~p~gil~aR~-~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~lG~~~  215 (316)
                      +||++|.+||++++|.|++++|+ .+..  .++.|+++|+.+|+++++++++|+++++...++.+ ...+++|+++|+++
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~r~~~~~~--~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~~~~~~~s~H~~lGl~~   78 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVARPLTRFL--SKPTWFLLHVVLQILALVLGVIGLLAIFISHNESGIANFYSLHSWLGLAA   78 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhHhhcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCccchhHHHHHHH
Confidence            69999999999999999999997 3332  46899999999999999999999999998766542 33579999999999


Q ss_pred             HHHHHHHHHhhhcccCCC---CCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q 045142          216 LVLGFIQVLALKLRPKKE---HKYRIWWNFYHHSVGYAIIILSIFNIFEGF  263 (316)
Q Consensus       216 ~~l~~~Q~l~~~~rp~~~---~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~  263 (316)
                      +++.++|++.|++++.++   .+.|+.++++|+++|++++++|++|+++|+
T Consensus        79 ~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~~~~lG~  129 (129)
T smart00665       79 FVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFILAIVTIFLGL  129 (129)
T ss_pred             HHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            999999999998887765   677899999999999999999999999985

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=99.90  E-value=1.9e-23  Score=172.93  Aligned_cols=128  Identities=32%  Similarity=0.467  Sum_probs=109.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-CccccccchhhHHHH
Q 045142          138 VHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTIGILLL  216 (316)
Q Consensus       138 ~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~lG~~~~  216 (316)
                      +|++||.+||++++|.|++++|+.+..+.+++.|+++|+.+|.+++++.++|+++++...++.+ ...+++|+++|++++
T Consensus         1 ~H~~lm~~~f~~l~~~~il~~r~~~~~~~~~~~~~~~H~~lq~l~~~~~~~G~~~~~~~~~~~~~~h~~s~H~~lG~~~~   80 (137)
T PF03188_consen    1 WHPILMTIGFVFLMPEGILAARYNPFRRKSRKWWFRIHWILQVLALVFAIIGFVAIFINKNRNGKPHFKSWHSILGLATF   80 (137)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCchhhhhHHHH
Confidence            6999999999999999999999744212257889999999999999999999999987665432 234799999999999


Q ss_pred             HHHHHHHHhhhcc---cCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          217 VLGFIQVLALKLR---PKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       217 ~l~~~Q~l~~~~r---p~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      ++.++|++.|+++   |.++.+.|+.++++|+++|++++++|++|+.+|+..
T Consensus        81 ~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~~i~~G~~~  132 (137)
T PF03188_consen   81 VLALLQPLLGFFRFFMPGLPRKRRPIWNKWHRWLGYLIYVLAIATIFLGLTE  132 (137)
T ss_pred             HHHHHHHHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999988754   445556788999999999999999999999999953

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=99.89  E-value=9.3e-23  Score=167.79  Aligned_cols=126  Identities=24%  Similarity=0.311  Sum_probs=109.1

Q ss_pred             hHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-CccccccchhhHH
Q 045142          136 KQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTIGIL  214 (316)
Q Consensus       136 ~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~lG~~  214 (316)
                      +++|+++|.++|++++|.|++.+|++|..  .++.|+++|+.+|++++++.++|+.+++...++.+ ...++.|+++|++
T Consensus         2 f~~H~~lm~~g~~~l~~~~il~~r~~~~~--~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~~~~~h~~s~Hs~lGl~   79 (131)
T cd08554           2 FNWHPLLMVIGFVFLMGEALLVYRVFRLL--TKRALKLLHAILHLLAFVLGLVGLLAVFLFHNAGGIANLYSLHSWLGLA   79 (131)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccchhHHHHHHHH
Confidence            57899999999999999999999998765  36789999999999999999999999998764332 2346999999999


Q ss_pred             HHHHHHHHHHhhhcc---cCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhh
Q 045142          215 LLVLGFIQVLALKLR---PKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGF  263 (316)
Q Consensus       215 ~~~l~~~Q~l~~~~r---p~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~  263 (316)
                      ++++.++|++.|+.+   |....+.|+.++++|+++|+++++++++|+++|+
T Consensus        80 ~~~l~~~q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~t~~~G~  131 (131)
T cd08554          80 TVLLFLLQFLSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIFVLAIATILLGI  131 (131)
T ss_pred             HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999987643   4444445889999999999999999999999985

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=99.86  E-value=1.6e-21  Score=161.80  Aligned_cols=132  Identities=20%  Similarity=0.123  Sum_probs=114.3

Q ss_pred             CcchhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccc
Q 045142          131 GTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHR  209 (316)
Q Consensus       131 ~~~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~  209 (316)
                      +...++++|+.||.+++.++++.|+++.|..|.   .++.|..+|+.+|.+++++.++|+...+...++.+ ...++.|+
T Consensus         3 ~~~~~Fn~HP~lM~~gfi~l~~eAiL~~r~~~~---~k~~~k~iH~~l~~la~~~~vvGl~avf~~~~~~~~~~~~SlHS   79 (144)
T cd08766           3 NKGLIFNVHPVLMVIGFIFLAGEAILAYKTVPG---SREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEVGIPNLYSLHS   79 (144)
T ss_pred             CCcceeeccHHHHHHHHHHHHHHHHHHhhcccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccHHH
Confidence            345789999999999999999999999997663   36678899999999999999999999888765543 23479999


Q ss_pred             hhhHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          210 TIGILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       210 ~lG~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |+|++++++..+|.+.|+   +.|....+.|+...++|+++|+++++++++++.+|+..
T Consensus        80 wlGl~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~~~la~~t~~lGl~e  138 (144)
T cd08766          80 WLGIGTISLFGLQWLFGFVTFWFPGASRNTRAALLPWHVFLGLAIYYLAIATAETGLLE  138 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998664   57876556788889999999999999999999999975

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=99.86  E-value=4.2e-21  Score=166.80  Aligned_cols=134  Identities=19%  Similarity=0.177  Sum_probs=110.4

Q ss_pred             cchhhHhhHHHHHHHHHHHHHHHHHHHHhhcccc-cCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccc
Q 045142          132 TLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQ-SADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHR  209 (316)
Q Consensus       132 ~~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~-~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~  209 (316)
                      .+.++++|+++|+++|++++|.|++..|-..... .+++.|+++|+.+|.++++++++|+.+++...++.+ .+.++.|+
T Consensus        17 ~~~~f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~~~~~~~~hf~s~H~   96 (183)
T cd08761          17 GTSLFSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYNKERNGKPHFTSWHG   96 (183)
T ss_pred             ccceeehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCccchhH
Confidence            3567999999999999999999999765322111 246789999999999999999999999887654432 23469999


Q ss_pred             hhhHHHHHHHHHHHHhhhc---ccCCCC--CCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          210 TIGILLLVLGFIQVLALKL---RPKKEH--KYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       210 ~lG~~~~~l~~~Q~l~~~~---rp~~~~--~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      ++|++++++.++|++.|+.   +|....  ++|+.++++|+++|++++++|++|+.+|++.
T Consensus        97 ~lGl~~~~l~~~Q~~~G~~~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~t~~lGl~~  157 (183)
T cd08761          97 ILGLVTVILIVLQALGGLALLYPPGLRRGESKAKKLKKYHRLSGYVAYLLGLATLVLGLET  157 (183)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHhhHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999999999997763   343332  5778899999999999999999999999987

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=99.84  E-value=1.6e-20  Score=159.74  Aligned_cols=133  Identities=21%  Similarity=0.141  Sum_probs=114.7

Q ss_pred             chhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccchh
Q 045142          133 LHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTI  211 (316)
Q Consensus       133 ~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~l  211 (316)
                      .+.+++|++||+++++++...++++.|..+....++..|+.+|..+|.++++++++|+...+...++.+ ...++.|+|+
T Consensus        32 ~~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~hn~~~~~nlySlHSWl  111 (179)
T cd08762          32 SKNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVHHTANLYSLHSWV  111 (179)
T ss_pred             CCceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHH
Confidence            347999999999999999999999998666543346678999999999999999999999998776653 2247999999


Q ss_pred             hHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          212 GILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       212 G~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |++++++..+|.+.|+   +.|....+.|....++|+.+|+.+++++++++.+|+..
T Consensus       112 Gl~t~~Lf~lQ~~~Gf~~f~~p~~~~~~ra~~~p~H~~~G~~if~Laiat~~lGl~e  168 (179)
T cd08762         112 GICTVALFTCQWVMGFTSFLLPWAPMWLRALVKPIHVFFGAMILVLSIASCISGINE  168 (179)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998665   46666666788889999999999999999999999985

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=99.84  E-value=2.3e-20  Score=155.71  Aligned_cols=133  Identities=17%  Similarity=0.108  Sum_probs=114.3

Q ss_pred             chhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccchh
Q 045142          133 LHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTI  211 (316)
Q Consensus       133 ~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~l  211 (316)
                      ...+++|++||.+++.+++..++++.|..+..+..++.+..+|+.+|.+++++.++|+...+...++.+ ...++.|+|+
T Consensus         9 ~~~Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~~hn~~~~~~fySlHSwl   88 (153)
T cd08765           9 AAEFNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAKNIPNMYSLHSWV   88 (153)
T ss_pred             CCeeechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCccccHHHHH
Confidence            458899999999999999999999998654432246778999999999999999999999888766553 2347999999


Q ss_pred             hHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          212 GILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       212 G~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |++++++..+|.+.|+   +.|....+.|+...++|+++|+++++|+++++.+|+..
T Consensus        89 Gl~t~~l~~lQ~~~Gf~~f~~P~~~~~~r~~~~p~H~~~G~~i~~Lai~t~~lG~~e  145 (153)
T cd08765          89 GLAAVILYPLQLVLGISVYLLPVAPVRLRAALMPLHVYSGLFIFGTVIATALMGITE  145 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998664   46776556789999999999999999999999999975

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>PLN02351 cytochromes b561 family protein

Probab=99.83  E-value=5.9e-20  Score=162.54  Aligned_cols=126  Identities=15%  Similarity=0.064  Sum_probs=107.6

Q ss_pred             hh-HhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC--Cccccccchh
Q 045142          135 FK-QVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH--GIQHSTHRTI  211 (316)
Q Consensus       135 ~~-~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~--~~~~~~H~~l  211 (316)
                      .+ ++|++||+++|+++.+.||+++|.+|.   .++.|+.+|+.+|.++++++++|+...+.  ++.+  ...++.|+|+
T Consensus        49 iffn~HP~lMviGfi~L~geAILvYR~~~~---~~k~~K~lH~~Lh~~Ali~~vvGl~a~fh--~~~~~i~nlySLHSWl  123 (242)
T PLN02351         49 VYAVLHPLLMVIGFILISGEAILVHRWLPG---SRKTKKSVHLWLQGLALASGVFGIWTKFH--GQDGIVANFYSLHSWM  123 (242)
T ss_pred             eeecccHHHHHHHHHHHHHHHHHHhhcccc---cchHHHHHHHHHHHHHHHHHHHHHHHHHh--cccCCccchhHHHHHH
Confidence            45 799999999999999999999998864   34569999999999999999999998333  3221  2347999999


Q ss_pred             hHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          212 GILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       212 G~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |++++++..+|.+.|+   +.|......|....++|.++|+.+++++++++.+|+..
T Consensus       124 Gl~tv~Lf~lQwv~Gf~~F~~P~~~~~~Ra~~~P~Hv~~Gl~if~LaiaTa~lGl~E  180 (242)
T PLN02351        124 GLICVSLFGAQWLTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVATAETGLLE  180 (242)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998664   46666566788889999999999999999999999985

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=99.82  E-value=2.2e-19  Score=157.86  Aligned_cols=131  Identities=17%  Similarity=0.115  Sum_probs=112.5

Q ss_pred             chhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccC--C-Cccccccc
Q 045142          133 LHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKS--H-GIQHSTHR  209 (316)
Q Consensus       133 ~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~--~-~~~~~~H~  209 (316)
                      ...+++|+++|.+++.+++..|+++.|.+|..  .++.++.+|+.+|.++++++++|+..++...++.  + ...++.|+
T Consensus        21 ~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~--~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hfySlHS   98 (214)
T cd08764          21 GLQFNWHPLLMVLGLIFLYGNSILVYRVFRNT--RKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNMYSLHS   98 (214)
T ss_pred             CceEeecHHHHHHHHHHHHHHHHHHhccCccc--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHH
Confidence            45689999999999999999999999987753  3566788999999999999999999887665444  2 23479999


Q ss_pred             hhhHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          210 TIGILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       210 ~lG~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |+|++++++..+|.+.|+   +.|......|+...++|+++|+++++++++++.+|+..
T Consensus        99 wlGl~t~~L~~lQ~~~Gf~~fl~P~~~~~~r~~~~p~H~~~Gl~~fvLaiaT~~lGl~e  157 (214)
T cd08764          99 WLGLTAVILFSLQWVGGFVSFLFPGLPETLRAAYLPLHVFFGLFIFVLAVATALLGITE  157 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998664   57776556778888899999999999999999999975

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02810 carbon-monoxide oxygenase

Probab=99.81  E-value=4.6e-19  Score=155.65  Aligned_cols=130  Identities=19%  Similarity=0.133  Sum_probs=114.9

Q ss_pred             chhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccchh
Q 045142          133 LHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTI  211 (316)
Q Consensus       133 ~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~l  211 (316)
                      +..+++|++||.+++.++...|+++.|.+|.   .++.++.+|+.+|.++++++++|+...|...++.+ ...++.|+|+
T Consensus        44 ~~~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~---~k~~~K~iH~~lh~~Al~l~vvGl~Avf~~Hn~~~i~nlySLHSWl  120 (231)
T PLN02810         44 NLIFNLHPVLMLIGLIIIGGEAIMSYKSLPL---KKEVKKLIHLVLHAIALILGIFGICAAFKNHNESGIANLYSLHSWL  120 (231)
T ss_pred             CceeeehHHHHHHHHHHHhhHHHHHhhcccc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeHHHHH
Confidence            4589999999999999999999999987664   25667899999999999999999999998776653 2347999999


Q ss_pred             hHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          212 GILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       212 G~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |++++++..+|.+.|+   +.|......|....++|.++|..+++++++++.+|+..
T Consensus       121 Gl~tv~Lf~lQw~~Gf~~Fl~P~~~~~~R~~~lP~Hv~~Gl~if~LAiata~lGi~E  177 (231)
T PLN02810        121 GIGIISLYGIQWIYGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVGNAALGFLE  177 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998665   67887767788888999999999999999999999985

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=99.81  E-value=2.8e-19  Score=148.21  Aligned_cols=130  Identities=20%  Similarity=0.136  Sum_probs=113.0

Q ss_pred             hhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccchhh
Q 045142          134 HFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTIG  212 (316)
Q Consensus       134 ~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~lG  212 (316)
                      ..+++|+.+|.+++.+++..++++.|..+..  .++.+.++|+.+|.+++++.++|+...+...++.+ ...++.|+|+|
T Consensus         5 ~~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~--~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~~~~~hf~SlHswlG   82 (143)
T cd08763           5 LQFNVHPLCMVLGLVFLCGEALLVYRVFRNE--TKRSTKILHGLLHIMALVISLVGLVAVFDYHQANGYPDMYSLHSWCG   82 (143)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhcccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCccccHHHHHH
Confidence            3899999999999999999999999876543  35667899999999999999999999887665543 23479999999


Q ss_pred             HHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          213 ILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       213 ~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      ++++++..+|.+.|+   +.|....+.|..++++|+++|+++++++++++.+|+..
T Consensus        83 l~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~f~la~~t~~lG~~e  138 (143)
T cd08763          83 ILTFVLYFLQWLIGFSFFLFPGASFTLRSQYKPLHEFFGRALFLSSVGTSLLGLTE  138 (143)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999998664   57776667789999999999999999999999999974

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02680 carbon-monoxide oxygenase

Probab=99.80  E-value=8.3e-19  Score=155.15  Aligned_cols=132  Identities=17%  Similarity=0.093  Sum_probs=113.1

Q ss_pred             CcchhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccc
Q 045142          131 GTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHR  209 (316)
Q Consensus       131 ~~~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~  209 (316)
                      ++...+++|++||.+++.+++..+++..|..|.   .++.+..+|+.+|.+++++.++|+...+...++.+ ...++.|+
T Consensus        42 ~~~~~Fn~HPlLM~~Gfi~l~geAIL~yr~~~~---~k~~~K~iH~~L~~lA~~l~vvGl~avfk~hn~~~~~nfySlHS  118 (232)
T PLN02680         42 NKDLIFNVHPVLMVIGLVLLNGEAMLAYKTVPG---TKNLKKLVHLTLQFLAFCLSLIGVWAALKFHNEKGIDNFYSLHS  118 (232)
T ss_pred             CCcceEechHHHHHHHHHHHHHHHHhccccccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccHHH
Confidence            335588999999999999999999999876553   46678899999999999999999999888776553 23479999


Q ss_pred             hhhHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          210 TIGILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       210 ~lG~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |+|++++++..+|.+.|+   +.|....+.|+...++|+++|+++++++++++.+|+..
T Consensus       119 WlGl~t~iL~~lQ~~~Gf~~f~~P~~~~~~R~~~~p~H~~~G~~if~LaiaT~~lG~~E  177 (232)
T PLN02680        119 WLGLACLFLFSLQWAAGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVATATTGILE  177 (232)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998664   57776556677788999999999999999999999985

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=99.76  E-value=2.3e-18  Score=150.82  Aligned_cols=131  Identities=20%  Similarity=0.173  Sum_probs=115.7

Q ss_pred             chhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCC-Cccccccchh
Q 045142          133 LHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSH-GIQHSTHRTI  211 (316)
Q Consensus       133 ~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~-~~~~~~H~~l  211 (316)
                      ++.+++|++||+++|.++.-.++++.|.+|..  .++.-+-+|..+|+++++++++|+...|...+..+ ...++.|+|+
T Consensus        52 ~~~fnlHP~lMviGfI~l~GeAiL~YR~~r~~--~k~~~KliH~~LH~~Alvl~i~gl~avf~~hn~~~i~NfySLHSWl  129 (245)
T KOG1619|consen   52 NKEFNLHPVLMVIGFIYLQGEAILIYRVFRYT--SKKVSKLIHLGLHIIALVLAIIGLCAVFDSHNLVGIANFYSLHSWL  129 (245)
T ss_pred             chhcCcchHHHHHHHHHhccceeeeeehhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccceeeHHHHH
Confidence            57899999999999999999999999987764  35667889999999999999999999998766553 2347999999


Q ss_pred             hHHHHHHHHHHHHhhh---cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          212 GILLLVLGFIQVLALK---LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       212 G~~~~~l~~~Q~l~~~---~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |+++++++.+|.+.||   +.|.-..+.|....++|+.+|..+++++++|+.+|+..
T Consensus       130 Gl~~v~ly~~Q~v~GF~tfl~pg~~~~~Rs~lmP~H~~~Gl~~f~lai~ta~~Gl~e  186 (245)
T KOG1619|consen  130 GLCVVILYSLQWVFGFFTFLFPGSPESYRSRLMPWHVFLGLAIFILAIVTALTGLLE  186 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCccHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999997654   67877778999999999999999999999999999964

>smart00664 DoH Possible catecholamine-binding domain present in a variety of eukaryotic proteins

Probab=99.74  E-value=3.5e-17  Score=137.12  Aligned_cols=112  Identities=29%  Similarity=0.474  Sum_probs=91.1

Q ss_pred             CceEEEEECCCCCCCCCCcEEEEEEcCCCcEEEEEeeecccccccCCCCccceeccc-eeEeeCCEEEEEEEEecCCCC-
Q 045142            4 TRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKI-SADFSNNEMTIFATIVLPKNM-   81 (316)
Q Consensus         4 ~gWva~GfS~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~~~~~~~~~l~~~-s~~~~~g~~t~~f~~~l~~~~-   81 (316)
                      .||+|||||+++ +|.|+|++|||.+++|++.+.++++++++.|..|..++  +.+. ++.++||.++|+|+|++.+++ 
T Consensus        27 ~gwvaiGfs~~~-~M~~~d~vv~~~~~~g~~~v~d~~~~~~~~~~~d~~~~--~~~~~~~~~~~g~~~~~f~R~l~t~d~  103 (148)
T smart00664       27 NGWVAIGFSPDG-QMAGADVVVAWVDNNGRVTVKDYYTPGYGPPVEDDQQD--VTDLLSATYENGVLTCRFRRKLGSNDP  103 (148)
T ss_pred             CCEEEEEECCCC-CcCCCCEEEEEEcCCCCEEEEEEEcCCCCCCCcCcccc--cccceeEEEECCEEEEEEEEEccCCCc
Confidence            899999999996 99999999999987799999999999999887665443  3333 677899999999999998644 


Q ss_pred             -------CceeEEeeecCCCCCCCCCCCCCCCCCCccceEEeeccCc
Q 045142           82 -------TTVSHVWQEGPVRGDNHLGMHPLGGDNVKSMGTLDLLSGK  121 (316)
Q Consensus        82 -------~~~~~IwA~G~~~~~~~l~~H~~~~~~~~s~~~ldl~~g~  121 (316)
                             .+.+++||.|+..+++.+.+|+..   ..+..++++.++.
T Consensus       104 ~d~~~~~~~~~~i~a~G~~~~~~~~~~H~~~---~~~~~~i~~~~~~  147 (148)
T smart00664      104 DDKSLLDGTVHVLWAKGPLSPNGGLGYHDFS---LKSTKKVCLSSCT  147 (148)
T ss_pred             cccccCCCeEEEEEEECCCCCCCCeeecccc---ccCceEEEeccCC
Confidence                   367899999984346789999975   2346788887753

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press).

>PF04526 DUF568: Protein of unknown function (DUF568); InterPro: IPR017214 This group represents an uncharacterised conserved protein

Probab=99.69  E-value=3.3e-16  Score=121.77  Aligned_cols=100  Identities=51%  Similarity=0.822  Sum_probs=93.6

Q ss_pred             CCCCcEEEEEEcCC-CcEEEEEeeecccccccCCCCccceeccceeEeeCCEEEEEEEEecCCCCCceeEEeeecCCCCC
Q 045142           18 MVGSQSLVAYRNPN-GILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGD   96 (316)
Q Consensus        18 M~gsd~vI~~~~~~-G~v~v~~~~~~g~~~p~~~~~~~~~l~~~s~~~~~g~~t~~f~~~l~~~~~~~~~IwA~G~~~~~   96 (316)
                      |.|++++|++++++ |.+.+.+|.++++..+..+..+++++.+.+++++++.++||++.+||++.+++|++|+.|+...+
T Consensus         1 M~GtqALvAf~~~~~G~~~v~T~~i~sy~~~l~~~~lsf~v~~lsae~~~~~~~IfAtl~Lp~n~t~vnhVWQ~G~~v~g   80 (101)
T PF04526_consen    1 MVGTQALVAFKNSNGGSVTVYTYNITSYSPSLQPGPLSFDVSDLSAEYSGGEMTIFATLKLPGNSTSVNHVWQVGPSVQG   80 (101)
T ss_pred             CCCceEEEEEeCCCCceEEEEEEeecccccccccccccccccceEeEEeCCEEEEEEEEEcCCCCcEEEEEeCcCCccCC
Confidence            99999999999988 88999999999998867777789999999999999999999999999999999999999998768


Q ss_pred             CCCCCCCCCCCCCccceEEee
Q 045142           97 NHLGMHPLGGDNVKSMGTLDL  117 (316)
Q Consensus        97 ~~l~~H~~~~~~~~s~~~ldl  117 (316)
                      +.+..|+..+.|+.|..+|||
T Consensus        81 g~p~~H~~~~~Nl~S~gtldl  101 (101)
T PF04526_consen   81 GSPQPHPTSGANLQSKGTLDL  101 (101)
T ss_pred             CccccCCCCCccccceEEecC
Confidence            999999999999999999997

>PF03351 DOMON: DOMON domain; InterPro: IPR005018 The DOMON domain is an 110-125 residue long domain which has been identified in the physiologically important enzyme dopamine beta-monooxygenase and in several other secreted and transmembrane proteins from both plants and animals

Probab=99.54  E-value=6.4e-14  Score=113.52  Aligned_cols=84  Identities=27%  Similarity=0.394  Sum_probs=69.9

Q ss_pred             CceEEEEECCCCCCCCCCcEEEEEEcCCCcEEEEEee-ecccccccCCCC--ccceeccceeEeeCCEEEEEEEEecCCC
Q 045142            4 TRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSP-VMGYGTNLQEGN--LSFQVPKISADFSNNEMTIFATIVLPKN   80 (316)
Q Consensus         4 ~gWva~GfS~~g~~M~gsd~vI~~~~~~G~v~v~~~~-~~g~~~p~~~~~--~~~~l~~~s~~~~~g~~t~~f~~~l~~~   80 (316)
                      .||+|+|||+++ +|.++|+++||.+ +|++.+.+++ ..++..|..++.  +++.+.  +..+++|.++|.|+|++.+.
T Consensus        29 ~~w~aiGfs~~~-~M~~~Dvv~~~~~-~~~~~v~d~~~~~~~~~p~~d~~~~~~~~~~--~~~~~~g~~~~~F~R~l~t~  104 (124)
T PF03351_consen   29 NGWVAIGFSDDG-GMGGSDVVVCWVD-DGKVYVQDYYSTGGYGPPTVDDQGSQDIQLL--SGSYSNGTTTCSFTRPLNTG  104 (124)
T ss_pred             CCEEEEEEcccc-CCCCCcEEEEEEc-CCceeEEEeeccCcccceeeccccCCcEEEE--EEEEECCEEEEEEEEEccCC
Confidence            899999999987 8999999999998 7999999999 899988877743  444444  56678999999999998752


Q ss_pred             ---------CCceeEEeeec
Q 045142           81 ---------MTTVSHVWQEG   91 (316)
Q Consensus        81 ---------~~~~~~IwA~G   91 (316)
                               +.+.++|||+|
T Consensus       105 d~~d~~l~~~~~~~~i~A~G  124 (124)
T PF03351_consen  105 DSQDYDLDSNGTYYVIWAYG  124 (124)
T ss_pred             CCCccEecCCCcEEEEEEeC
Confidence                     34568999987

It has been named after DOpamine beta-MOnooxygenase N-terminal domain. The DOMON domain can be found in one to four copies and in association with other domains, such as the Cu-ascorbate dependent monooxygenase domain, the epidermal growth factor domain, the trypsin inhibitor-like domain (TIL), the SEA domain and the Reelin domain. The architectures of the DOMON domain proteins strongly suggest a function in extracellular adhesion []. The sequence conservation is predominantly centred around patches of hydrophobic residues. The secondary structure prediction of the DOMON domain points to an all-beta-strand fold with seven or eight core strands supported by a buried core of conserved hydrophobic residues. There is a chraracteristic motif with two small positions (Gly or Ser) corresponding to a conserved turn immediately C-terminal to strand three. It has been proposed that the DOMON domain might form a beta-sandwich structure, with the strands distributed into two beta sheets as is seen in many extracellular adhesion domains such as the immunoglobulin, fibronectin type III, cadherin and PKD domains [].

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=99.44  E-value=7.6e-13  Score=104.29  Aligned_cols=90  Identities=21%  Similarity=0.310  Sum_probs=77.2

Q ss_pred             CCcchhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccccCCCc-ccccc
Q 045142          130 SGTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGI-QHSTH  208 (316)
Q Consensus       130 ~~~~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~~~-~~~~H  208 (316)
                      ++.+....+|+++|.++|++++|+|+++.+. |      .   ++|.++|++.++++++|+.++....++.+++ .++.|
T Consensus        12 ~~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~-~------s---r~~~~~q~~~~~l~~~g~~~g~~~~~~~p~lyp~n~H   81 (105)
T PF10348_consen   12 SPHRSALYAHIVLMTLAWVILYPIGLVLGNA-R------S---RWHLPVQTVFLVLMILGLFLGSVYNGSTPDLYPNNAH   81 (105)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHHHHHc-c------c---hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            3457789999999999999999999998663 2      2   4599999999999999999998877666554 67999


Q ss_pred             chhhHHHHHHHHHHHHhhhcc
Q 045142          209 RTIGILLLVLGFIQVLALKLR  229 (316)
Q Consensus       209 ~~lG~~~~~l~~~Q~l~~~~r  229 (316)
                      .++|+++++++++|++.++++
T Consensus        82 ~k~g~il~~l~~~q~~~gv~~  102 (105)
T PF10348_consen   82 GKMGWILFVLMIVQVILGVIL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999877654

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>cd00241 CDH_cytochrome Cellobiose dehydrogenase (CellobioseDH), cytochrome domain; This extracellular fungal oxidoreductase degrades both lignin and cellulose

Probab=99.38  E-value=6.3e-12  Score=108.41  Aligned_cols=111  Identities=18%  Similarity=0.225  Sum_probs=84.2

Q ss_pred             CCCCceEEEEECCCCCCCCCCcEEEEEEcCCCcEEEEEeeecccccc-cCCCCccceeccceeEeeCCEEEEEEEEe---
Q 045142            1 MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTN-LQEGNLSFQVPKISADFSNNEMTIFATIV---   76 (316)
Q Consensus         1 ~~~~gWva~GfS~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p-~~~~~~~~~l~~~s~~~~~g~~t~~f~~~---   76 (316)
                      |.+.||+|+|+   |++|.|+.++|+|.|.+ +|+++.|+.+||.+| .++++..++++..+. .++++++..|+|+   
T Consensus        49 P~~~gW~gls~---Gg~M~~~~L~vaw~~g~-~Vt~S~R~atg~~~P~~y~g~a~~t~L~gs~-vn~t~~t~~~rC~nC~  123 (184)
T cd00241          49 PRASGWIGLAL---GGAMTNSLLLVAWPNGN-QIVSSTRYATGYTLPDAYTGPATITQLPSSS-VNSTHWKLVFRCQNCT  123 (184)
T ss_pred             cCCCCeEEEee---cccCCCCeEEEEEcCCC-eEEEeEEEecCccCCCccCCCceEEECCCCc-EeCCEEEEEEEeCCCc
Confidence            67799999999   88999999999999744 599999999999988 566666777776654 4899999777663   


Q ss_pred             -cC-CC----CCceeEEeeecCC------CCCCCCCCCCCCCCCCccceEEeeccCc
Q 045142           77 -LP-KN----MTTVSHVWQEGPV------RGDNHLGMHPLGGDNVKSMGTLDLLSGK  121 (316)
Q Consensus        77 -l~-~~----~~~~~~IwA~G~~------~~~~~l~~H~~~~~~~~s~~~ldl~~g~  121 (316)
                       ++ .+    .+...++||+++.      +++..|.+|+..|     .+.+||....
T Consensus       124 ~W~~gg~~~~t~~~~~~wA~~~~~~~~p~~~~a~i~~Hd~~G-----~f~~dl~~A~  175 (184)
T cd00241         124 SWNNGGGIDPTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDFG-----FFGINLSDAQ  175 (184)
T ss_pred             ccCCCCccCcCCCceEEEEECCCCCCCCCCcccCCceecCCc-----ceeEechhcc
Confidence             33 11    1122688998522      2367799999766     6899998644

It is a hemoflavoenzyme that is comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The 2 domains can be separated proteolytically. The cytochrome domain folds as a beta sandwich and complexes a heme molecule.

>KOG3568 consensus Dopamine beta-monooxygenase [Amino acid transport and metabolism]

Probab=98.36  E-value=6.4e-07  Score=85.80  Aligned_cols=98  Identities=13%  Similarity=0.080  Sum_probs=71.3

Q ss_pred             CCceEEEEECCCCCCCCCCcEEEEEEcCCCcEEEEEeeecccccccCCCCccceeccceeEeeCCEEEEEEEEecCC---
Q 045142            3 PTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPK---   79 (316)
Q Consensus         3 ~~gWva~GfS~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~~~~~~~~~l~~~s~~~~~g~~t~~f~~~l~~---   79 (316)
                      +.+|++||||+.| .|.+||++++|.+ .+..++.|++.+....-..|.++|++|+...  .+...+++.|+|++.+   
T Consensus        66 t~~~v~fGfSdrG-~lanaDivv~~n~-g~~~~~~DayTn~d~qi~~D~QQDyqll~~~--e~~~~~~i~frRkl~TCDp  141 (603)
T KOG3568|consen   66 TAGYVGFGFSDRG-ALANADIVVGGNA-GGRPYLQDAYTNADGQIKKDAQQDYQLLYAM--ENSTHTIIEFRRKLHTCDP  141 (603)
T ss_pred             cCCEEEEecCCcC-CcccCcEEEEecc-CCchhhhhhhcCCCCceecchhhhhHHHhhh--ccCCccEEEEecccCcCCc
Confidence            4689999999998 9999999999964 4557888988876666666777888887543  3455566789997653   


Q ss_pred             -----CCCceeEEeeecCCCC-CCCCCCCCC
Q 045142           80 -----NMTTVSHVWQEGPVRG-DNHLGMHPL  104 (316)
Q Consensus        80 -----~~~~~~~IwA~G~~~~-~~~l~~H~~  104 (316)
                           .+++++++||+-..+. +.+..+|+.
T Consensus       142 ~Dy~i~dgTv~vv~a~~eed~r~l~~v~~~~  172 (603)
T KOG3568|consen  142 NDYSITDGTVRVVWAYLEEDARELGPVYHDS  172 (603)
T ss_pred             cceeccCCeEEEEEEEeccchhhcccccccc
Confidence                 3578899999754321 233445553

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=97.29  E-value=0.0036  Score=55.53  Aligned_cols=98  Identities=13%  Similarity=0.030  Sum_probs=66.2

Q ss_pred             CcchhhhhHhHHHHHHHHHHHHHHhhhhccccC-CCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHH
Q 045142          168 DPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKS-HGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHS  246 (316)
Q Consensus       168 ~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~-~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~  246 (316)
                      +...|.+|..+|++|+++...=-++.+...... +....-.|..+..+.+++.++-....+-.+.+..+..+-+...|-|
T Consensus        20 ~~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hfySlHSw   99 (214)
T cd08764          20 PGLQFNWHPLLMVLGLIFLYGNSILVYRVFRNTRKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNMYSLHSW   99 (214)
T ss_pred             CCceEeecHHHHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHH
Confidence            345799999999999876544333334432211 1112348999999999888777554443333322233556678999


Q ss_pred             HHHHHHHHHHHHHHHhhcc
Q 045142          247 VGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       247 ~G~~~~~l~~~ni~lG~~~  265 (316)
                      +|.++++|-..|...|+..
T Consensus       100 lGl~t~~L~~lQ~~~Gf~~  118 (214)
T cd08764         100 LGLTAVILFSLQWVGGFVS  118 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999843

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=97.13  E-value=0.034  Score=47.87  Aligned_cols=97  Identities=14%  Similarity=0.043  Sum_probs=64.7

Q ss_pred             CcchhhhhHhHHHHHHHHHHHHHHhhhhcc-cc--CCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHH
Q 045142          168 DPAWFYAHIICQSSAYLLGIAGAGTGIYLG-NK--SHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYH  244 (316)
Q Consensus       168 ~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~-~~--~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H  244 (316)
                      ++..|.+|..+|++++++.-.=.++.+... ++  ++......|..+=.+.+++.++-....+-.+...  ..+-.-.+|
T Consensus        31 ~~~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~hn~~--~~~nlySlH  108 (179)
T cd08762          31 SSKNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVH--HTANLYSLH  108 (179)
T ss_pred             CCCceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--CccchhhHH
Confidence            344799999999999887644344444321 11  1111246888888877777776665555433322  123344579


Q ss_pred             HHHHHHHHHHHHHHHHHhhccc
Q 045142          245 HSVGYAIIILSIFNIFEGFNIL  266 (316)
Q Consensus       245 ~~~G~~~~~l~~~ni~lG~~~~  266 (316)
                      -|+|..++++-..|...|+..+
T Consensus       109 SWlGl~t~~Lf~lQ~~~Gf~~f  130 (179)
T cd08762         109 SWVGICTVALFTCQWVMGFTSF  130 (179)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999765

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=97.09  E-value=0.0079  Score=50.14  Aligned_cols=95  Identities=19%  Similarity=0.116  Sum_probs=64.0

Q ss_pred             cchhhhhHhHHHHHHHHHHHHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHH
Q 045142          169 PAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVG  248 (316)
Q Consensus       169 ~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G  248 (316)
                      ...|.+|..+|++|+++...=-++.+.....++......|..+=++.+++.++-....+..+...  ..+-+..+|-|+|
T Consensus         5 ~~~Fn~HP~lM~~gfi~l~~eAiL~~r~~~~~k~~~k~iH~~l~~la~~~~vvGl~avf~~~~~~--~~~~~~SlHSwlG   82 (144)
T cd08766           5 GLIFNVHPVLMVIGFIFLAGEAILAYKTVPGSREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEV--GIPNLYSLHSWLG   82 (144)
T ss_pred             cceeeccHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc--CccccccHHHHHH
Confidence            35799999999999866554344445432222222345888888877777766655444322221  2344667899999


Q ss_pred             HHHHHHHHHHHHHhhcc
Q 045142          249 YAIIILSIFNIFEGFNI  265 (316)
Q Consensus       249 ~~~~~l~~~ni~lG~~~  265 (316)
                      .+++++-..|...|+..
T Consensus        83 l~t~~L~~lQ~~~G~~~   99 (144)
T cd08766          83 IGTISLFGLQWLFGFVT   99 (144)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999999863

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=97.09  E-value=0.0077  Score=50.14  Aligned_cols=94  Identities=15%  Similarity=0.139  Sum_probs=68.3

Q ss_pred             hhhhhHhHHHHHHHHHHHHHHhhhhccc-cCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHHH
Q 045142          171 WFYAHIICQSSAYLLGIAGAGTGIYLGN-KSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGY  249 (316)
Q Consensus       171 wf~~H~~~q~~~~~~~~~g~~l~~~~~~-~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~  249 (316)
                      =|.+|..+|++|+++...-.++.+.... .++......|.++.++.+++.++-....+..+.+.  ..+-+...|-|+|.
T Consensus         6 ~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~~--~~~hf~SlHswlGl   83 (143)
T cd08763           6 QFNVHPLCMVLGLVFLCGEALLVYRVFRNETKRSTKILHGLLHIMALVISLVGLVAVFDYHQAN--GYPDMYSLHSWCGI   83 (143)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcccc--CCCccccHHHHHHH
Confidence            5889999999998876654454443322 22223346999999999988887766555433332  33567789999999


Q ss_pred             HHHHHHHHHHHHhhccc
Q 045142          250 AIIILSIFNIFEGFNIL  266 (316)
Q Consensus       250 ~~~~l~~~ni~lG~~~~  266 (316)
                      +++++-..|...|+..+
T Consensus        84 ~t~~L~~lQ~~~G~~~f  100 (143)
T cd08763          84 LTFVLYFLQWLIGFSFF  100 (143)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998764

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=97.00  E-value=0.01  Score=48.37  Aligned_cols=93  Identities=18%  Similarity=0.199  Sum_probs=64.5

Q ss_pred             hhhhHhHHHHHHHHHHHHHHhhhhcc-ccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHHHH
Q 045142          172 FYAHIICQSSAYLLGIAGAGTGIYLG-NKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYA  250 (316)
Q Consensus       172 f~~H~~~q~~~~~~~~~g~~l~~~~~-~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~~  250 (316)
                      |.+|..+|.+++++...--++..... ...+......|..+.++.+++.++-....+..+..  +.++-+...|.++|.+
T Consensus         2 f~~H~~lm~~g~~~l~~~~il~~r~~~~~~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~--~~~~h~~s~Hs~lGl~   79 (131)
T cd08554           2 FNWHPLLMVIGFVFLMGEALLVYRVFRLLTKRALKLLHAILHLLAFVLGLVGLLAVFLFHNA--GGIANLYSLHSWLGLA   79 (131)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCcccchhHHHHHHHH
Confidence            56899999999875444333333332 11112224689999998888877776666554332  2235567789999999


Q ss_pred             HHHHHHHHHHHhhccc
Q 045142          251 IIILSIFNIFEGFNIL  266 (316)
Q Consensus       251 ~~~l~~~ni~lG~~~~  266 (316)
                      ++++..+|...|+...
T Consensus        80 ~~~l~~~q~~~G~~~~   95 (131)
T cd08554          80 TVLLFLLQFLSGFVLF   95 (131)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998764

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=96.97  E-value=0.014  Score=47.53  Aligned_cols=94  Identities=21%  Similarity=0.169  Sum_probs=63.2

Q ss_pred             hhHhHHHHHHHHHH-HHHHhhhhcccc-CCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHHHHH
Q 045142          174 AHIICQSSAYLLGI-AGAGTGIYLGNK-SHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYAI  251 (316)
Q Consensus       174 ~H~~~q~~~~~~~~-~g~~l~~~~~~~-~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~~~  251 (316)
                      +|..++.+++++.. .|+.+.-..... .+..-...|..+.++.+++.++-...++......  .++-++..|.++|.++
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~r~~~~~~~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~--~~~~~~s~H~~lGl~~   78 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVARPLTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISHNES--GIANFYSLHSWLGLAA   78 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--CCCCccchhHHHHHHH
Confidence            58999999976544 444443211111 1112246899999888887776666555443322  2356778899999999


Q ss_pred             HHHHHHHHHHhhcccCCC
Q 045142          252 IILSIFNIFEGFNILNPL  269 (316)
Q Consensus       252 ~~l~~~ni~lG~~~~~~~  269 (316)
                      +++..+|...|+.....+
T Consensus        79 ~~l~~~Q~~~G~~~~~~~   96 (129)
T smart00665       79 FVLAGLQWLSGFLRPLPP   96 (129)
T ss_pred             HHHHHHHHHHHHHHhcCC
Confidence            999999999999976543

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>PLN02680 carbon-monoxide oxygenase

Probab=96.91  E-value=0.039  Score=49.48  Aligned_cols=126  Identities=18%  Similarity=0.179  Sum_probs=76.6

Q ss_pred             hhhhhHhHHHHHHHHHHHHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHHHH
Q 045142          171 WFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYA  250 (316)
Q Consensus       171 wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~~  250 (316)
                      =|.+|..+|++|+++...-.++.+.....++......|..+=.+.+++.++-....+-.+..  +..+-+..+|-|+|.+
T Consensus        46 ~Fn~HPlLM~~Gfi~l~geAIL~yr~~~~~k~~~K~iH~~L~~lA~~l~vvGl~avfk~hn~--~~~~nfySlHSWlGl~  123 (232)
T PLN02680         46 IFNVHPVLMVIGLVLLNGEAMLAYKTVPGTKNLKKLVHLTLQFLAFCLSLIGVWAALKFHNE--KGIDNFYSLHSWLGLA  123 (232)
T ss_pred             eEechHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCccccccHHHHHHHH
Confidence            68999999999999855444444433222222234578877777777666555443322222  2235566789999999


Q ss_pred             HHHHHHHHHHHhhccc-CCC---------CchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045142          251 IIILSIFNIFEGFNIL-NPL---------KIWRLVYACILVALGAIAAILEVVTRVMV  298 (316)
Q Consensus       251 ~~~l~~~ni~lG~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~lev~~~~~~  298 (316)
                      ++++-..|...|+..+ -+.         ..|-...+..+.+++++...+.+..-..+
T Consensus       124 t~iL~~lQ~~~Gf~~f~~P~~~~~~R~~~~p~H~~~G~~if~LaiaT~~lG~~Ek~~f  181 (232)
T PLN02680        124 CLFLFSLQWAAGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVATATTGILEKATF  181 (232)
T ss_pred             HHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999998763 111         11222334444455555555655554433

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=96.91  E-value=0.014  Score=50.84  Aligned_cols=97  Identities=16%  Similarity=0.098  Sum_probs=67.8

Q ss_pred             CcchhhhhHhHHHHHHHHHH-HHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHH
Q 045142          168 DPAWFYAHIICQSSAYLLGI-AGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHS  246 (316)
Q Consensus       168 ~~~wf~~H~~~q~~~~~~~~-~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~  246 (316)
                      ....++.|..+|+++..+.. +|+.++-......+.+ ...|..+=++.+++.++-...++...   .+.+..++..|.+
T Consensus        32 ~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~~~~~~~-~~~H~~~q~~~~~~~i~g~~~~~~~~---~~~~~~~~~~H~~  107 (191)
T cd08760          32 SDTLIKAHGVLMAIAWGILMPIGALLARYFLLGDPVW-FYLHAGLQLLAVLLAIAGFVLGIVLV---QGGGGSLNNAHAI  107 (191)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-HHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcCcchh
Confidence            45578999999999977655 4555442221112223 36899888877777776665555432   2234567889999


Q ss_pred             HHHHHHHHHHHHHHHhhcccCC
Q 045142          247 VGYAIIILSIFNIFEGFNILNP  268 (316)
Q Consensus       247 ~G~~~~~l~~~ni~lG~~~~~~  268 (316)
                      +|.+++++.++|.++|+.....
T Consensus       108 lGl~~~~l~~lQ~~~G~~~~~~  129 (191)
T cd08760         108 LGIIVLALAILQPLLGLLRPHP  129 (191)
T ss_pred             hhHHHHHHHHHHHHHHHhcCCC
Confidence            9999999999999999976543

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=96.87  E-value=0.02  Score=49.33  Aligned_cols=60  Identities=18%  Similarity=0.280  Sum_probs=44.8

Q ss_pred             ccccccchhhHHHHHHHHHHHHhh-hcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 045142          203 IQHSTHRTIGILLLVLGFIQVLAL-KLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNIL  266 (316)
Q Consensus       203 ~~~~~H~~lG~~~~~l~~~Q~l~~-~~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~  266 (316)
                      ...++|-+.|+.+..++.++.... .+.+.    +++.++..|..++.+++++-..|..+|.+..
T Consensus       112 lf~spH~~~Gl~~~~L~~~s~al~~~i~~g----~~~~~R~lHi~lN~~~l~Lf~~q~itG~~il  172 (175)
T PF13301_consen  112 LFWSPHLWAGLAVVGLMAFSAALVPQIQKG----NRPWARRLHIYLNSLALLLFAWQAITGWRIL  172 (175)
T ss_pred             CccCchHHHHHHHHHHHHHHHHHHHHHccC----CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            346889999999998888886433 33321    2356778999999999999999999988754

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=96.69  E-value=0.024  Score=49.07  Aligned_cols=96  Identities=16%  Similarity=0.233  Sum_probs=66.8

Q ss_pred             CcchhhhhHhHHHHHHHHHHHHHHhhhhcccc----CCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhH
Q 045142          168 DPAWFYAHIICQSSAYLLGIAGAGTGIYLGNK----SHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFY  243 (316)
Q Consensus       168 ~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~----~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~  243 (316)
                      ....|.+|..+|.+++.+.....++.+...+.    ++......|.++-.+.+++.++-....+.....  +.++-++-.
T Consensus        17 ~~~~f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~~~~--~~~~hf~s~   94 (183)
T cd08761          17 GTSLFSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYNKER--NGKPHFTSW   94 (183)
T ss_pred             ccceeehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCCCCccch
Confidence            34578999999999988766555544432211    112224799999998888777665444432222  234567788


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcc
Q 045142          244 HHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       244 H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |.|+|.+++++...|...|+..
T Consensus        95 H~~lGl~~~~l~~~Q~~~G~~~  116 (183)
T cd08761          95 HGILGLVTVILIVLQALGGLAL  116 (183)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHH
Confidence            9999999999999999999964

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=96.53  E-value=0.01  Score=48.55  Aligned_cols=95  Identities=18%  Similarity=0.223  Sum_probs=67.6

Q ss_pred             CcchhhHhhHHHHHHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhccc---cC---CCcc
Q 045142          131 GTLHFKQVHGIINAVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGN---KS---HGIQ  204 (316)
Q Consensus       131 ~~~~~~~~Hg~lm~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~---~~---~~~~  204 (316)
                      +++...+.|.+++.++..+.. +|+.++-+.|... +.+.....|..+-++.+++++.=.++|+....   ..   +...
T Consensus        30 ~~~~~~~~H~~lq~l~~~~~~-~G~~~~~~~~~~~-~~~h~~s~H~~lG~~~~~l~~~Q~~~G~~~~~~~~~~~~~r~~~  107 (137)
T PF03188_consen   30 SRKWWFRIHWILQVLALVFAI-IGFVAIFINKNRN-GKPHFKSWHSILGLATFVLALLQPLLGFFRFFMPGLPRKRRPIW  107 (137)
T ss_pred             ccchHHHHHHHHHHHHHHHHH-HHHHHHHHhcccc-CCCCCCCchhhhhHHHHHHHHHHHHHHHHHHccCCCcccHHHHH
Confidence            456788999999999977666 5555544444432 24566788999999988888877777764321   11   1112


Q ss_pred             ccccchhhHHHHHHHHHHHHhhh
Q 045142          205 HSTHRTIGILLLVLGFIQVLALK  227 (316)
Q Consensus       205 ~~~H~~lG~~~~~l~~~Q~l~~~  227 (316)
                      ...|.++|.+++++.+.+...|+
T Consensus       108 ~~~H~~~G~~~~~l~~~~i~~G~  130 (137)
T PF03188_consen  108 NKWHRWLGYLIYVLAIATIFLGL  130 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            46799999999999999998776

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>PLN02351 cytochromes b561 family protein

Probab=96.47  E-value=0.27  Score=44.34  Aligned_cols=125  Identities=14%  Similarity=0.070  Sum_probs=73.7

Q ss_pred             hhhhhHhHHHHHHHHHHHHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHHHH
Q 045142          171 WFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYA  250 (316)
Q Consensus       171 wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~~  250 (316)
                      .|.+|..+|++|+++.-.=-++.+.....++......|..+=.+.+++.++-...   .-+..++..+-+-.+|-|+|..
T Consensus        50 ffn~HP~lMviGfi~L~geAILvYR~~~~~~k~~K~lH~~Lh~~Ali~~vvGl~a---~fh~~~~~i~nlySLHSWlGl~  126 (242)
T PLN02351         50 YAVLHPLLMVIGFILISGEAILVHRWLPGSRKTKKSVHLWLQGLALASGVFGIWT---KFHGQDGIVANFYSLHSWMGLI  126 (242)
T ss_pred             eecccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHH---HHhcccCCccchhHHHHHHHHH
Confidence            4579999999998876654445454432222223457776666665555444333   1111111123455679999999


Q ss_pred             HHHHHHHHHHHhhcccCCC----------CchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 045142          251 IIILSIFNIFEGFNILNPL----------KIWRLVYACILVALGAIAAILEVVTRVMV  298 (316)
Q Consensus       251 ~~~l~~~ni~lG~~~~~~~----------~~~~~~~~~~~~~~~~~~~~lev~~~~~~  298 (316)
                      ++++=.+|-..|+..+-.|          ..|-..++..+.+++++..++.+..-..+
T Consensus       127 tv~Lf~lQwv~Gf~~F~~P~~~~~~Ra~~~P~Hv~~Gl~if~LaiaTa~lGl~EKl~F  184 (242)
T PLN02351        127 CVSLFGAQWLTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVATAETGLLEKLTF  184 (242)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999764222          12444445555555555555555544433

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=96.30  E-value=0.075  Score=47.51  Aligned_cols=120  Identities=18%  Similarity=0.144  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHhhccc-ccCCc-chhhhhHhHHHHHHHHHHHHHHh-hhhc-cccCCCccccccchhhHHHHHHH
Q 045142          144 AVSWGFLMPVGAITARYMKVF-QSADP-AWFYAHIICQSSAYLLGIAGAGT-GIYL-GNKSHGIQHSTHRTIGILLLVLG  219 (316)
Q Consensus       144 ~~aw~~l~p~gil~aR~~k~~-~~~~~-~wf~~H~~~q~~~~~~~~~g~~l-~~~~-~~~~~~~~~~~H~~lG~~~~~l~  219 (316)
                      .+++....-.+..+..|...+ |+.++ .-|.+|..+|++|++..- |..+ .+.. ...++....-.|..+=++.+++.
T Consensus        25 l~G~i~v~lvl~W~~~yr~Glaw~~~~~~~fnlHP~lMviGfI~l~-GeAiL~YR~~r~~~k~~~KliH~~LH~~Alvl~  103 (245)
T KOG1619|consen   25 LLGFITVVLVLYWVNTYRGGLAWSSSPNKEFNLHPVLMVIGFIYLQ-GEAILIYRVFRYTSKKVSKLIHLGLHIIALVLA  103 (245)
T ss_pred             HHHHHHHHHHHHHHHHcCCccCCCCCcchhcCcchHHHHHHHHHhc-cceeeeeehhhhhhHHHHHHHHHHHHHHHHHHH
Confidence            344444444444444443222 22233 468899999999887654 3333 3333 23333344568999988888888


Q ss_pred             HHHHHhhhcccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 045142          220 FIQVLALKLRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNIL  266 (316)
Q Consensus       220 ~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~  266 (316)
                      ++-....|..+...+  -.-+-.+|-|+|..++++=.+|-..|+.-+
T Consensus       104 i~gl~avf~~hn~~~--i~NfySLHSWlGl~~v~ly~~Q~v~GF~tf  148 (245)
T KOG1619|consen  104 IIGLCAVFDSHNLVG--IANFYSLHSWLGLCVVILYSLQWVFGFFTF  148 (245)
T ss_pred             HHHHHHHHHHhhhcC--ccceeeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            877766665444433  234556899999999999999999998864

>PLN02810 carbon-monoxide oxygenase

Probab=96.29  E-value=0.066  Score=47.81  Aligned_cols=124  Identities=15%  Similarity=0.119  Sum_probs=76.5

Q ss_pred             cchhhhhHhHHHHHHHHHHHHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHHHHH
Q 045142          169 PAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVG  248 (316)
Q Consensus       169 ~~wf~~H~~~q~~~~~~~~~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~~~G  248 (316)
                      +.=|.+|..+|++|+++.-.=-++.+.....++......|..+=.+.+++.++-....|-.+...  ..+-+-.+|-|+|
T Consensus        44 ~~~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~~k~~~K~iH~~lh~~Al~l~vvGl~Avf~~Hn~~--~i~nlySLHSWlG  121 (231)
T PLN02810         44 NLIFNLHPVLMLIGLIIIGGEAIMSYKSLPLKKEVKKLIHLVLHAIALILGIFGICAAFKNHNES--GIANLYSLHSWLG  121 (231)
T ss_pred             CceeeehHHHHHHHHHHHhhHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--CCCceeeHHHHHH
Confidence            34689999999999887665455555432212222346888877777777666655544333322  2245567999999


Q ss_pred             HHHHHHHHHHHHHhhccc---CCC-------CchhhhHHHHHHHHHHHHHHHHHHH
Q 045142          249 YAIIILSIFNIFEGFNIL---NPL-------KIWRLVYACILVALGAIAAILEVVT  294 (316)
Q Consensus       249 ~~~~~l~~~ni~lG~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~lev~~  294 (316)
                      ..++++=..|-..|+..+   +.+       ..|-..++..+..+++....+.+..
T Consensus       122 l~tv~Lf~lQw~~Gf~~Fl~P~~~~~~R~~~lP~Hv~~Gl~if~LAiata~lGi~E  177 (231)
T PLN02810        122 IGIISLYGIQWIYGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVGNAALGFLE  177 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999432   222       1233344444444555444444444

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=95.96  E-value=0.15  Score=42.87  Aligned_cols=96  Identities=21%  Similarity=0.154  Sum_probs=61.5

Q ss_pred             cchhhhhHhHHHHHHHHHHHHHHhhhhcc-c--cCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHH
Q 045142          169 PAWFYAHIICQSSAYLLGIAGAGTGIYLG-N--KSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHH  245 (316)
Q Consensus       169 ~~wf~~H~~~q~~~~~~~~~g~~l~~~~~-~--~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~  245 (316)
                      +.=|.+|..+|++++++.-.=.++.+... .  .++......|.++=.+.+++.++-....+..+...  ..+-+..+|-
T Consensus         9 ~~~Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~~hn~~--~~~~fySlHS   86 (153)
T cd08765           9 AAEFNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAK--NIPNMYSLHS   86 (153)
T ss_pred             CCeeechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHcccc--CCCccccHHH
Confidence            44689999999999887433333333211 0  11222235777766666666555544433332222  2356778999


Q ss_pred             HHHHHHHHHHHHHHHHhhccc
Q 045142          246 SVGYAIIILSIFNIFEGFNIL  266 (316)
Q Consensus       246 ~~G~~~~~l~~~ni~lG~~~~  266 (316)
                      |+|.+++++-..|...|+..+
T Consensus        87 wlGl~t~~l~~lQ~~~Gf~~f  107 (153)
T cd08765          87 WVGLAAVILYPLQLVLGISVY  107 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998765

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=95.10  E-value=0.095  Score=44.70  Aligned_cols=93  Identities=18%  Similarity=0.115  Sum_probs=57.5

Q ss_pred             hhhHhHHHHHHHHHHHHHHhhhh--ccccC-C--CccccccchhhHHHHHHHHHHHHhhhcc------------------
Q 045142          173 YAHIICQSSAYLLGIAGAGTGIY--LGNKS-H--GIQHSTHRTIGILLLVLGFIQVLALKLR------------------  229 (316)
Q Consensus       173 ~~H~~~q~~~~~~~~~g~~l~~~--~~~~~-~--~~~~~~H~~lG~~~~~l~~~Q~l~~~~r------------------  229 (316)
                      .+|+..-++-+++.+.|+.+...  ..... .  ......|..+|++.+++.++..+..+.+                  
T Consensus        10 ~~Hw~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (188)
T PF00033_consen   10 LLHWLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIPQYR   89 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHHHhh
Confidence            46776666666666667766422  11111 1  1124788888888888888888766655                  


Q ss_pred             cC--CCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          230 PK--KEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       230 p~--~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      +.  ++.+..+.+|...+..-.+++++..+...+|+.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~  127 (188)
T PF00033_consen   90 LFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIM  127 (188)
T ss_dssp             TT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11  1122335567888888888888888888888888

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>COG2717 Predicted membrane protein [Function unknown]

Probab=93.97  E-value=1.2  Score=39.39  Aligned_cols=127  Identities=17%  Similarity=0.175  Sum_probs=65.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhcc---ccC---CCccccccchhhHHHHH
Q 045142          144 AVSWGFLMPVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLG---NKS---HGIQHSTHRTIGILLLV  217 (316)
Q Consensus       144 ~~aw~~l~p~gil~aR~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~~---~~~---~~~~~~~H~~lG~~~~~  217 (316)
                      .+.|.+++=+.....|+.+     .+.+.++=+.+-+.++..++.=+..-+...   +-+   .+..+.+=-.+|++.++
T Consensus        51 al~fLl~~la~tp~~~~~~-----~~~l~~~Rr~LGl~af~~~~lH~~~Y~~~~l~~~~~~~~~d~~~rpyitiG~iafl  125 (209)
T COG2717          51 ALIFLLVTLAVTPLARLLK-----QPKLIRIRRALGLWAFFYALLHFTAYLVLDLGLDLALLGLDLLKRPYITIGMIAFL  125 (209)
T ss_pred             HHHHHHHHHHHHHHHHHhc-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHhhHHHHHhHHHHHHHHHHH
Confidence            3334444444445556543     345566667777666665554332221110   000   11123455566666666


Q ss_pred             HHHHHHHhhh--cccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhHHHHHHHH
Q 045142          218 LGFIQVLALK--LRPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVAL  283 (316)
Q Consensus       218 l~~~Q~l~~~--~rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~~~~~~~~~~~~~~~  283 (316)
                      +++.-.+..+  .+.+.    -+.|+.+|++ ++.+++|+.+-...+..   .+..+.+.|.++.+.+
T Consensus       126 ll~pLalTS~k~~~rrl----G~rW~~LHrL-vYl~~~L~~lH~~~s~K---~~~~~~vlY~ii~~~l  185 (209)
T COG2717         126 LLIPLALTSFKWVRRRL----GKRWKKLHRL-VYLALILGALHYLWSVK---IDMPEPVLYAIIFAVL  185 (209)
T ss_pred             HHHHHHHHhhHHHHHHH----HHHHHHHHHH-HHHHHHHHHHHHHHhcC---ccchHHHHHHHHHHHH
Confidence            5555444332  22111    1679999985 68888888877777332   2233556677665444

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=93.65  E-value=0.72  Score=36.29  Aligned_cols=89  Identities=20%  Similarity=0.284  Sum_probs=54.3

Q ss_pred             CCcchhhhhHhHHHHHHHHHH-HHHHhhhhccccCCCccccccchhhHHHHHHHHHHHHhhhcccCCCCCCccchhhHHH
Q 045142          167 ADPAWFYAHIICQSSAYLLGI-AGAGTGIYLGNKSHGIQHSTHRTIGILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHH  245 (316)
Q Consensus       167 ~~~~wf~~H~~~q~~~~~~~~-~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R~~~~~~H~  245 (316)
                      +.+...+.|..+|+++.++.. +|++++..-   +     ++|.-.=++-+++.++-.+.+......  ...-+.+-.|.
T Consensus        13 ~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~~---s-----r~~~~~q~~~~~l~~~g~~~g~~~~~~--~p~lyp~n~H~   82 (105)
T PF10348_consen   13 PHRSALYAHIVLMTLAWVILYPIGLVLGNAR---S-----RWHLPVQTVFLVLMILGLFLGSVYNGS--TPDLYPNNAHG   82 (105)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHcc---c-----hHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCHHH
Confidence            356789999999999866543 466654331   1     234433233333333333333222111  11134688999


Q ss_pred             HHHHHHHHHHHHHHHHhhcc
Q 045142          246 SVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       246 ~~G~~~~~l~~~ni~lG~~~  265 (316)
                      -+|.+++++.++|.++|+..
T Consensus        83 k~g~il~~l~~~q~~~gv~~  102 (105)
T PF10348_consen   83 KMGWILFVLMIVQVILGVIL  102 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999753

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=93.55  E-value=1.1  Score=38.05  Aligned_cols=130  Identities=12%  Similarity=0.121  Sum_probs=79.0

Q ss_pred             hhhHhhHHHHHHHHHHHHHHHHHHHH---hhcccccCCcchhhhhHhHHHHHHHHHHHHHHhhhhc--------------
Q 045142          134 HFKQVHGIINAVSWGFLMPVGAITAR---YMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYL--------------  196 (316)
Q Consensus       134 ~~~~~Hg~lm~~aw~~l~p~gil~aR---~~k~~~~~~~~wf~~H~~~q~~~~~~~~~g~~l~~~~--------------  196 (316)
                      ..+..| +++.+++.+++..|..+..   ............+.+|..+..+-+++.+.=+...+..              
T Consensus         7 ~~R~~H-w~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (188)
T PF00033_consen    7 FTRLLH-WLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQI   85 (188)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHH
Confidence            356788 7889999999999998763   1122222345678899988776655555444443333              


Q ss_pred             ----c-c----cCCCccccccchhhHHHHHHHHHHHHhhhcc--------cCCC---CCCccchhhHHHHHHHHHHHHHH
Q 045142          197 ----G-N----KSHGIQHSTHRTIGILLLVLGFIQVLALKLR--------PKKE---HKYRIWWNFYHHSVGYAIIILSI  256 (316)
Q Consensus       197 ----~-~----~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r--------p~~~---~~~R~~~~~~H~~~G~~~~~l~~  256 (316)
                          . .    ...+..+...+..-++++.+.+++++.|+..        +...   .........+|.+.+.++.++-.
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~~~~~~~~~~~~~~~~~~~~~~~~~iH~~~~~ll~~~i~  165 (188)
T PF00033_consen   86 PQYRLFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIMLWFFWWPLPPWLLPPPGLAEWARLIHFILAYLLLAFII  165 (188)
T ss_dssp             HHHHTT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC-----TTTTGGGS-HHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence                0 0    0111224566777777778888888866644        1111   12335678899999888887776


Q ss_pred             HHHHHhhc
Q 045142          257 FNIFEGFN  264 (316)
Q Consensus       257 ~ni~lG~~  264 (316)
                      +=++.++.
T Consensus       166 ~Hi~~a~~  173 (188)
T PF00033_consen  166 IHIYAAIF  173 (188)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66665544

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=93.31  E-value=1.4  Score=37.85  Aligned_cols=60  Identities=22%  Similarity=0.148  Sum_probs=47.9

Q ss_pred             ccccchhhHHHHHHHHHHHHhhhc---ccCCCCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045142          205 HSTHRTIGILLLVLGFIQVLALKL---RPKKEHKYRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPL  269 (316)
Q Consensus       205 ~~~H~~lG~~~~~l~~~Q~l~~~~---rp~~~~~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~  269 (316)
                      ...|..+|.++++++.+..++|..   +..     -+.+..-|-|.|.++..|-.++..+.-++...+
T Consensus        80 r~~H~~~g~~ll~~~~L~~lGG~~~~~~~~-----~~lf~spH~~~Gl~~~~L~~~s~al~~~i~~g~  142 (175)
T PF13301_consen   80 RDRHYRLGFALLAFMGLGALGGQLGTYRQN-----GKLFWSPHLWAGLAVVGLMAFSAALVPQIQKGN  142 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchHHHHHcC-----CCCccCchHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            579999999999999999887742   221     135556699999999999999999988887543

>COG5658 Predicted integral membrane protein [Function unknown]

Probab=92.82  E-value=0.87  Score=40.04  Aligned_cols=73  Identities=8%  Similarity=-0.018  Sum_probs=55.4

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCc
Q 045142          236 YRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVMVIRQRRKIENP  308 (316)
Q Consensus       236 ~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~lev~~~~~~~~~~~~~~~~  308 (316)
                      .+..|++.|+++|-.+++.+.+....+.......+-+...+....+.++...+.+.+..+...-+++++++..
T Consensus        41 d~~~wk~a~~~l~pl~vi~gl~~~~~~~l~~~~~~~~~~v~~~~~~~Il~li~~ls~~l~~~g~d~~~~~~~~  113 (204)
T COG5658          41 DQAMWKKAGLFLGPLLVIGGLVTRYMSLLAGGQGQMLLAVALFAAVLILFLILLLSAILVALGYDIPGRRFPM  113 (204)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccc
Confidence            3467999999999999999999988887776665556666666666666666667777777777777777643

>PF13172 PepSY_TM_1: PepSY-associated TM helix

Probab=91.37  E-value=0.32  Score=29.98  Aligned_cols=31  Identities=19%  Similarity=0.332  Sum_probs=26.1

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcccC
Q 045142          237 RIWWNFYHHSVGYAIIILSIFNIFEGFNILN  267 (316)
Q Consensus       237 R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~  267 (316)
                      |+.+..+|+++|..+.+.-.+-+.+|+.+..
T Consensus         2 r~~~~~~H~~~g~~~~~~ll~~~lTG~~l~~   32 (34)
T PF13172_consen    2 RKFWRKIHRWLGLIAAIFLLLLALTGALLNF   32 (34)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5678889999999999999888888887653

>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function

Probab=91.14  E-value=1.1  Score=41.30  Aligned_cols=122  Identities=16%  Similarity=0.144  Sum_probs=68.4

Q ss_pred             hHHHHHHHHHHHHHHhhhhcccc---CCCccccccchhhHHHHHHHHHHHHhhhc---ccCCCCCCccchhhHHHHHHHH
Q 045142          177 ICQSSAYLLGIAGAGTGIYLGNK---SHGIQHSTHRTIGILLLVLGFIQVLALKL---RPKKEHKYRIWWNFYHHSVGYA  250 (316)
Q Consensus       177 ~~q~~~~~~~~~g~~l~~~~~~~---~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~---rp~~~~~~R~~~~~~H~~~G~~  250 (316)
                      .+..+..+++++|++-.+.+-.+   .+.+..--|-..|+...+-.++-.+.-+.   |..-..+.|+.|.++       
T Consensus       156 ~Liav~~~~~li~~iw~~~Ll~~~~~~p~y~VAGhVm~Gla~iCtsLIaLVAtI~RQirN~ys~~Er~~W~~l-------  228 (347)
T PF10951_consen  156 ILIAVPILCALIGWIWAIVLLSSSDEHPAYFVAGHVMFGLACICTSLIALVATIARQIRNTYSEKERWKWPKL-------  228 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCccceehhHHHhhHHHHHHHHHHHHHHHHHHHhccccHHHhhhhHHH-------
Confidence            34455667777788877765432   23333467888888888777666665554   444445566666654       


Q ss_pred             HHHHHHHHHHHhhccc--CCC-----CchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 045142          251 IIILSIFNIFEGFNIL--NPL-----KIWRLVYACILVALGAIAAILEVVTRVMVIRQRRKI  305 (316)
Q Consensus       251 ~~~l~~~ni~lG~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~lev~~~~~~~~~~~~~  305 (316)
                      ++++|-+++..|+.+.  +.+     .++...-.+.++.-.-.=++|-.--|++.+|-.+|.
T Consensus       229 Vl~mGsi~~l~Gl~vl~~~~~~~~~~~G~ilIGLGlvCySIsSKViLLA~vWr~~f~LAnRI  290 (347)
T PF10951_consen  229 VLVMGSISILWGLYVLLASSGPANNAPGYILIGLGLVCYSISSKVILLAKVWRREFKLANRI  290 (347)
T ss_pred             HHHHhhHHHHhhhheEEecCCcccCCcceeeeehhhHHHHHHHHHHHHHHHHHhhcchhccC
Confidence            4555666666666653  111     233332222232222233344445588888877764

>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function

Probab=91.07  E-value=0.83  Score=35.67  Aligned_cols=30  Identities=13%  Similarity=0.091  Sum_probs=24.5

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhccc
Q 045142          237 RIWWNFYHHSVGYAIIILSIFNIFEGFNIL  266 (316)
Q Consensus       237 R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~  266 (316)
                      |+.....|+++||+-.++..+....|+.+.
T Consensus         2 R~k~~~~HR~lGrvyv~~~~~~a~sa~~i~   31 (103)
T PF10067_consen    2 RRKGPRLHRWLGRVYVAAMLISALSALFIA   31 (103)
T ss_pred             CCCcccHHHhhhHHHHHHHHHHHHHHHHHH
Confidence            455667899999999999988888888775

>PF01292 Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPro: IPR011577 Cytochrome b561 is an integral membrane and electron transport protein, that binds two haem groups non-covalently

Probab=90.13  E-value=6.8  Score=33.04  Aligned_cols=20  Identities=15%  Similarity=0.330  Sum_probs=11.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcc
Q 045142          246 SVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       246 ~~G~~~~~l~~~ni~lG~~~  265 (316)
                      ....+.+++..+.+.+|+-+
T Consensus       103 ~~~~~~~~~~~~~~iTG~~~  122 (182)
T PF01292_consen  103 IVHWVLYLLLLLLPITGLLL  122 (182)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            34445555555555666655

This domain is also found in a number of nickel-dependent hydrogenase subunits which are also B-type cytochromes that interact with quinones and anchor the hydrogenase to the membrane. Members of the 'eukaryotic cytochrome b561' family can be found in IPR004877 from INTERPRO.; GO: 0009055 electron carrier activity, 0016021 integral to membrane

>PRK05419 putative sulfite oxidase subunit YedZ; Reviewed

Probab=89.94  E-value=9.5  Score=33.66  Aligned_cols=43  Identities=28%  Similarity=0.328  Sum_probs=24.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhHHHHHHHHHH
Q 045142          239 WWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGA  285 (316)
Q Consensus       239 ~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~~~~~~~~~~~~~~~~~  285 (316)
                      .|+.+|+. .+.+++++.+=.+.......   .-...|.++++.+++
T Consensus       145 ~Wk~LH~l-~Y~a~~L~~~H~~~~~k~~~---~~~~~y~~~~~~ll~  187 (205)
T PRK05419        145 RWQKLHRL-VYLIAILAPLHYLWSVKSDS---PEPLIYAAIVAVLLA  187 (205)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHHHHhcccc---ccHHHHHHHHHHHHH
Confidence            69999988 55555677777555432211   112456666554433

>PF01292 Ni_hydr_CYTB: Prokaryotic cytochrome b561; InterPro: IPR011577 Cytochrome b561 is an integral membrane and electron transport protein, that binds two haem groups non-covalently

Probab=88.97  E-value=11  Score=31.82  Aligned_cols=21  Identities=29%  Similarity=0.420  Sum_probs=10.7

Q ss_pred             hHhhHHHHHHHHHHHHHHHHHH
Q 045142          136 KQVHGIINAVSWGFLMPVGAIT  157 (316)
Q Consensus       136 ~~~Hg~lm~~aw~~l~p~gil~  157 (316)
                      +..| +++.+++.+++..|..+
T Consensus         7 r~~H-W~~a~~~i~l~~tG~~~   27 (182)
T PF01292_consen    7 RILH-WLNALSFIALIATGLWI   27 (182)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHH
Confidence            3445 44555555555555544

This domain is also found in a number of nickel-dependent hydrogenase subunits which are also B-type cytochromes that interact with quinones and anchor the hydrogenase to the membrane. Members of the 'eukaryotic cytochrome b561' family can be found in IPR004877 from INTERPRO.; GO: 0009055 electron carrier activity, 0016021 integral to membrane

>COG3038 CybB Cytochrome B561 [Energy production and conversion]

Probab=88.05  E-value=10  Score=32.85  Aligned_cols=27  Identities=33%  Similarity=0.488  Sum_probs=21.0

Q ss_pred             ccccchhhHHHHHHHHHHHHhhhcccC
Q 045142          205 HSTHRTIGILLLVLGFIQVLALKLRPK  231 (316)
Q Consensus       205 ~~~H~~lG~~~~~l~~~Q~l~~~~rp~  231 (316)
                      ++.|..+|+.+++++++-.+.-+..|.
T Consensus        47 ~~~Hks~Gi~vl~L~v~Rl~wrl~~~~   73 (181)
T COG3038          47 YELHKSIGILVLALMVLRLLWRLRNPA   73 (181)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            578999999999988888876665443

>TIGR02125 CytB-hydogenase Ni/Fe-hydrogenase, b-type cytochrome subunit

Probab=86.01  E-value=16  Score=31.70  Aligned_cols=29  Identities=21%  Similarity=0.408  Sum_probs=22.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcccC
Q 045142          239 WWNFYHHSVGYAIIILSIFNIFEGFNILN  267 (316)
Q Consensus       239 ~~~~~H~~~G~~~~~l~~~ni~lG~~~~~  267 (316)
                      .+|..-++.-.+++++..+.+.+|+.+..
T Consensus       111 ~~n~~~k~~~~~l~~~~~~~~lTG~~~~~  139 (211)
T TIGR02125       111 GYNPLQFVAYFGFIVLILFMILTGLALYY  139 (211)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            34677777777888888999999988753

This model describes a family of cytochrome b proteins which appear to be specific for nickel-iron hydrogenase complexes. Every genome which contains a member of this family posesses a Ni/Fe hydrogenase according to Genome Properties (GenProp0177), and most are gene clustered with other hydrogenase components. Some Ni/Fe hydrogenase-containing species lack a member of this family but contain other CytB homologs (pfam01292) which may substitute for it.

>PF13706 PepSY_TM_3: PepSY-associated TM helix

Probab=85.78  E-value=1.3  Score=27.84  Aligned_cols=29  Identities=17%  Similarity=0.191  Sum_probs=23.6

Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 045142          237 RIWWNFYHHSVGYAIIILSIFNIFEGFNI  265 (316)
Q Consensus       237 R~~~~~~H~~~G~~~~~l~~~ni~lG~~~  265 (316)
                      |+.+...|+|+|.++-++-.+-++.|..+
T Consensus         1 rr~~~~~H~W~Gl~~g~~l~~~~~tG~~~   29 (37)
T PF13706_consen    1 RRILRKLHRWLGLILGLLLFVIFLTGAVM   29 (37)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            46778899999999888888888877654

>PF01794 Ferric_reduct: Ferric reductase like transmembrane component; InterPro: IPR013130 This family includes a common region in the transmembrane proteins mammalian cytochrome b-245 heavy chain (gp91-phox), ferric reductase transmembrane component in yeast and respiratory burst oxidase from Arabidopsis thaliana

Probab=85.71  E-value=4.4  Score=31.81  Aligned_cols=49  Identities=20%  Similarity=0.133  Sum_probs=29.4

Q ss_pred             hhHHHHHHHHHHHHhhhcccCCC----CCCccchhhHHHHHHHHHHHHHHHHHH
Q 045142          211 IGILLLVLGFIQVLALKLRPKKE----HKYRIWWNFYHHSVGYAIIILSIFNIF  260 (316)
Q Consensus       211 lG~~~~~l~~~Q~l~~~~rp~~~----~~~R~~~~~~H~~~G~~~~~l~~~ni~  260 (316)
                      +|.+.++++.++.+.+ .|+..-    +........+|+++|+.+++++.+=..
T Consensus         1 ~G~~a~~~l~~~~~l~-~R~~~l~~~~~~~~~~~~~~Hr~lg~~~~~~~~~H~~   53 (125)
T PF01794_consen    1 LGILAFALLPLVFLLG-LRNSPLARLTGISFDRLLRFHRWLGRLAFFLALLHGV   53 (125)
T ss_pred             CHHHHHHHHHHHHHHH-HhhhHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3666666666666544 333211    111223445999999999888887654

This may be a family of flavocytochromes capable of moving electrons across the plasma membrane [] that include a potential FAD binding domain. Mutations in the sequence of cytochrome b-245 heavy chain (gp91-phox) lead to the X-linked chronic granulomatous disease. The bacteriocidal ability of phagocytic cells is reduced and is characterised by the absence of a functional plasma membrane associated NADPH oxidase [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0016021 integral to membrane

>PRK11513 cytochrome b561; Provisional

Probab=85.09  E-value=4.8  Score=34.53  Aligned_cols=60  Identities=22%  Similarity=0.108  Sum_probs=34.7

Q ss_pred             ccccchhhHHHHHHHHHHHHhhhcccCCCCCCc-cch-hhHHHHHHHHHHHHHHHHHHHhhc
Q 045142          205 HSTHRTIGILLLVLGFIQVLALKLRPKKEHKYR-IWW-NFYHHSVGYAIIILSIFNIFEGFN  264 (316)
Q Consensus       205 ~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~R-~~~-~~~H~~~G~~~~~l~~~ni~lG~~  264 (316)
                      +..|..+|+++++++++-.+..+..+.+..... +.| +..=+..-.+++++-++...+|+.
T Consensus        42 ~~~H~s~G~~vl~L~v~Rl~~r~~~~~P~~~~~~~~~~~~~A~~~H~~LY~lli~~plsG~~  103 (176)
T PRK11513         42 NMIHVSCGISILVLMVVRLLLRLKYPTPPIVPKPKPMMTGLAHLGHLVIYLLFIALPVIGLV  103 (176)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            478999999999999999987766443321111 222 211122234555555555555554

>PF13630 SdpI: SdpI/YhfL protein family

Probab=80.81  E-value=2.5  Score=30.56  Aligned_cols=33  Identities=30%  Similarity=0.291  Sum_probs=28.2

Q ss_pred             CCccchhhHHHHHHHHHHHHHHHHHHHhhcccC
Q 045142          235 KYRIWWNFYHHSVGYAIIILSIFNIFEGFNILN  267 (316)
Q Consensus       235 ~~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~  267 (316)
                      +....|+..|+..|...++.|++.+..++....
T Consensus        18 ~s~~~W~~a~r~~g~~~~~~Gi~~~~~~~~~~~   50 (76)
T PF13630_consen   18 KSDENWKKAHRFAGKIFIIGGIVLLIIGIIILF   50 (76)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344789999999999999999999988888654

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=80.27  E-value=21  Score=29.13  Aligned_cols=56  Identities=18%  Similarity=0.333  Sum_probs=37.0

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 045142          236 YRIWWNFYHHSVGYAIIILSIFNIFEGFNILNPLKIWRLVYACILVALGAIAAILEVVTRVM  297 (316)
Q Consensus       236 ~R~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~lev~~~~~  297 (316)
                      .++.+..+..+.||.++.+=+..+.++.      .......+.++.++.++++++....-.+
T Consensus        57 i~~~~~FL~~~~GRGlfyif~G~l~~~~------~~~~~i~g~~~~~~G~~~i~l~~~~~~~  112 (136)
T PF08507_consen   57 IRKYFGFLYSYIGRGLFYIFLGTLCLGQ------SILSIIIGLLLFLVGVIYIILGFFCPIK  112 (136)
T ss_pred             HHHhHhHHHhHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            6678888999999998877666555555      1122344555556666677777766544

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 47/323 (14%), Positives = 83/323 (25%), Gaps = 124/323 (38%)

Query: 1   MKPTRWVAWAINPTGKGMVGS--QSLVA---------YRNPNGI----LKAYTSP--VMG 43
           ++P + V   I+    G++GS    +            +    I    LK   SP  V+ 
Sbjct: 147 LRPAKNVL--ID----GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL- 199

Query: 44  YGTNLQEGNLSFQVPKISADFSNNEMTIFATIVLPKNMTTVSHVWQEGPVRGDNHLGMHP 103
               LQ   L +Q   I  ++++             + + +              L   P
Sbjct: 200 --EMLQ--KLLYQ---IDPNWTS----------RSDHSSNIKLRIHSIQAELRRLLKSKP 242

Query: 104 -------LGGDNVKSMGTLDLLSGK----VTTT-KGGTSGTLHFKQVHGIINAVSWGFLM 151
                  L   NV++    +  +      +TT  K  T         H  ++  S     
Sbjct: 243 YENCLLVL--LNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP 300

Query: 152 PVGAITARYMKVFQSADPAWFYAHIICQSSAYLLGIAGAGTGIYLGNKSHGIQHSTHRTI 211
                                      +  + LL         YL  +    Q      +
Sbjct: 301 D--------------------------EVKSLLLK--------YLDCR---PQDLPREVL 323

Query: 212 GILLLVLGFIQVLALKLRPKKEHKYRIWWNFYHHSVGYA---IIILSI------------ 256
                 L  I   A  +R   +      W+ + H        II  S+            
Sbjct: 324 TTNPRRLSII---AESIR---DGLAT--WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375

Query: 257 --FNIF-EGFNILNPLK----IW 272
              ++F    +I  P      IW
Sbjct: 376 DRLSVFPPSAHI--PTILLSLIW 396

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
1d7b_A	186	Cellobiose dehydrogenase; B-type cytochrome, Met/H	99.63
4gd3_A	235	NI/Fe-hydrogenase 1 B-type cytochrome subunit; O2-	87.74
1kqf_C	217	FDH-N gamma, formate dehydrogenase, nitrate-induci	84.85

>1d7b_A Cellobiose dehydrogenase; B-type cytochrome, Met/His ligation, beta sandwich, Fe(II)- protoporphyrin IX, oxidoreductase; HET: NAG BMA HEM 1PG; 1.90A {Phanerochaete chrysosporium} SCOP: b.1.9.1 PDB: 1d7d_A* 1d7c_A* 1pl3_A*

Probab=99.63  E-value=1.9e-15  Score=129.91  Aligned_cols=111  Identities=15%  Similarity=0.180  Sum_probs=88.7

Q ss_pred             CCCCceEEEEECCCCCCCCCCcEEEEEEcCCCcEEEEEeeeccccccc-CCCCccceeccceeEeeCCEEEEEEEEe-cC
Q 045142            1 MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNL-QEGNLSFQVPKISADFSNNEMTIFATIV-LP   78 (316)
Q Consensus         1 ~~~~gWva~GfS~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~-~~~~~~~~l~~~s~~~~~g~~t~~f~~~-l~   78 (316)
                      |.+.||+|||+   |++|.|++|+|+|+|. |++++++|+.+||.+|. ++++.+++++..+. ++++++++.|+|+ |.
T Consensus        51 p~~~gW~g~g~---Gg~M~gs~l~v~w~~~-~~v~~S~R~a~g~~~P~~y~~~~~~~lL~gs~-vn~t~~~~~f~C~~C~  125 (186)
T 1d7b_A           51 PIASKWIGIAL---GGAMNNDLLLVAWANG-NQIVSSTRWATGYVQPTAYTGTATLTTLPETT-INSTHWKWVFRCQGCT  125 (186)
T ss_dssp             ETTCCEEEEET---TSSSSSSCEEEEEEET-TEEEEEEEECSSSSCCEECCSSCEEEECTTCE-ECSSEEEEEEEEETTT
T ss_pred             cCCCCEEEEec---CCCCCCCcEEEEEeCC-CEEEEEEEEecCccCCCccCCCceEEEccccc-EeCCEEEEEEEeCCCc
Confidence            56789999999   6799999999999984 88999999999999886 77778888887664 4899999988885 42


Q ss_pred             C---C-----CCceeEEeeecCCCC------CCCCCCCCCCCCCCccceEEeeccCc
Q 045142           79 K---N-----MTTVSHVWQEGPVRG------DNHLGMHPLGGDNVKSMGTLDLLSGK  121 (316)
Q Consensus        79 ~---~-----~~~~~~IwA~G~~~~------~~~l~~H~~~~~~~~s~~~ldl~~g~  121 (316)
                      .   +     .+...+|||+++..+      +..+.+|+..|     .+.+||....
T Consensus       126 ~w~~~g~~~~ts~~~~iwA~~~~~p~~~~~~~a~~~~H~~~G-----~~~~dL~~a~  177 (186)
T 1d7b_A          126 EWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDFG-----FFGIDYSTAH  177 (186)
T ss_dssp             BCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSEEE-----EEEEEGGGCB
T ss_pred             ccCCCCccccCCCCeEEEEECCCCCCCCCCCcccchhhhCcc-----eEEEEccccc
Confidence            1   1     122389999976532      45799999866     7899999754

>4gd3_A NI/Fe-hydrogenase 1 B-type cytochrome subunit; O2-tolerant H2:quinone oxidoreductase, membrane-bound, NI-Fe hydrogenase-cytochrome B complex; HET: LMT HEM; 3.30A {Escherichia coli}

Probab=87.74  E-value=9.2  Score=32.84  Aligned_cols=22  Identities=18%  Similarity=0.285  Sum_probs=12.9

Q ss_pred             hhHhhHHHHHHHHHHHHHHHHHH
Q 045142          135 FKQVHGIINAVSWGFLMPVGAIT  157 (316)
Q Consensus       135 ~~~~Hg~lm~~aw~~l~p~gil~  157 (316)
                      .+..| +++.+++.+++..|..+
T Consensus        18 ~R~~H-W~~a~~ii~l~~tG~~~   39 (235)
T 4gd3_A           18 VRIWH-WLTVLCMAVLMVTGYFI   39 (235)
T ss_dssp             TTHHH-HHHHHHHHHHHHHHHHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHh
Confidence            44556 56666666666666544

>1kqf_C FDH-N gamma, formate dehydrogenase, nitrate-inducible, cytochr B556(FDN) subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: f.21.1.1 PDB: 1kqg_C*

Probab=84.85  E-value=2.8  Score=35.62  Aligned_cols=29  Identities=14%  Similarity=0.165  Sum_probs=22.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHhhcccC
Q 045142          239 WWNFYHHSVGYAIIILSIFNIFEGFNILN  267 (316)
Q Consensus       239 ~~~~~H~~~G~~~~~l~~~ni~lG~~~~~  267 (316)
                      .+|+..+..=.+++++..+.+.+|+.++.
T Consensus       108 ~~n~~~~~~~~~l~~l~~~~~~TG~~~~~  136 (217)
T 1kqf_C          108 KYNAGQKMMFWSIMSMIFVLLVTGVIIWR  136 (217)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45667776667778888889999988874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d1pl3a_	186	Cytochrome domain of cellobiose dehydrogenase {Fun	99.65
d1kqfc_	216	Formate dehydrogenase N, cytochrome (gamma) subuni	84.15

>d1pl3a_ b.1.9.1 (A:) Cytochrome domain of cellobiose dehydrogenase {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: CBD9-like
family: Cytochrome domain of cellobiose dehydrogenase
domain: Cytochrome domain of cellobiose dehydrogenase
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=99.65  E-value=5.2e-16  Score=131.63  Aligned_cols=111  Identities=14%  Similarity=0.163  Sum_probs=87.5

Q ss_pred             CCCCceEEEEECCCCCCCCCCcEEEEEEcCCCcEEEEEeeeccccccc-CCCCccceeccceeEeeCCEEEEEEEEe-c-
Q 045142            1 MKPTRWVAWAINPTGKGMVGSQSLVAYRNPNGILKAYTSPVMGYGTNL-QEGNLSFQVPKISADFSNNEMTIFATIV-L-   77 (316)
Q Consensus         1 ~~~~gWva~GfS~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~-~~~~~~~~l~~~s~~~~~g~~t~~f~~~-l-   77 (316)
                      |.+.||+|||+   |++|.|++|+|+|+| +|++++++|+++||.+|. .+++.++.++..+. .++++++..|+|+ | 
T Consensus        51 p~~~GWvgiG~---gg~M~gs~l~V~w~~-~~~v~~S~R~atG~~~P~~~~~~~~~~~l~~s~-vn~t~~~~~f~C~~C~  125 (186)
T d1pl3a_          51 PIASKWIGIAL---GGAHNNDLLLVAWAN-GNQIVSSTRWATGYVQPTAYTGTATLTTLPETT-INSTHWKWVFRCQGCT  125 (186)
T ss_dssp             ETTCCEEEEET---TSSSSSSCEEEEEEE-TTEEEEEEEECSTTSCCEECCSSCEEEECTTCE-ECSSEEEEEEEEETCS
T ss_pred             CCCCcEEEEEc---CCCCCCCcEEEEEec-CCeEEEEEEEecceeCCcccCCCceEEEccCce-EECCEEEEEEEEeccc
Confidence            57899999999   669999999999997 688999999999999885 56555666665554 4799999888875 2 


Q ss_pred             --CC-----CCCceeEEeeecCCC------CCCCCCCCCCCCCCCccceEEeeccCc
Q 045142           78 --PK-----NMTTVSHVWQEGPVR------GDNHLGMHPLGGDNVKSMGTLDLLSGK  121 (316)
Q Consensus        78 --~~-----~~~~~~~IwA~G~~~------~~~~l~~H~~~~~~~~s~~~ldl~~g~  121 (316)
                        +.     .+.+..+|||+++..      ++..|.+|+.+|     .+.+||.+..
T Consensus       126 ~w~~~~~~~~~~~~~~iwA~~~~~p~~~~~~~~~i~~H~~~G-----~f~~dl~~a~  177 (186)
T d1pl3a_         126 EWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTDFG-----FFGIDYSTAH  177 (186)
T ss_dssp             BCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSEEE-----EEEEEGGGCB
T ss_pred             cccCCCcccCCCceEEEEEECCCCCCCCCCCccCcceecCCc-----eEEEEcccCc
Confidence              22     234568999998752      256899998766     7899998765

>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Heme-binding four-helical bundle
superfamily: Transmembrane di-heme cytochromes
family: Formate dehydrogenase N, cytochrome (gamma) subunit
domain: Formate dehydrogenase N, cytochrome (gamma) subunit
species: Escherichia coli [TaxId: 562]

Probab=84.15  E-value=8.1  Score=30.44  Aligned_cols=32  Identities=16%  Similarity=0.182  Sum_probs=27.4

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 045142          238 IWWNFYHHSVGYAIIILSIFNIFEGFNILNPL  269 (316)
Q Consensus       238 ~~~~~~H~~~G~~~~~l~~~ni~lG~~~~~~~  269 (316)
                      ..+|+..+....+++++..+.+.+|+.++.+.
T Consensus       106 ~~~n~~qkl~~~~~~~~~~~~~~TGl~l~~~~  137 (216)
T d1kqfc_         106 GKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPY  137 (216)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred             HhhhHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            45789999999999999999999999987653