Citrus Sinensis ID: 045222
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1049 | 2.2.26 [Sep-21-2011] | |||||||
| Q69V23 | 1093 | Probable cellulose syntha | yes | no | 0.995 | 0.955 | 0.736 | 0.0 | |
| Q851L8 | 1092 | Probable cellulose syntha | yes | no | 0.996 | 0.956 | 0.736 | 0.0 | |
| A2XNT2 | 1092 | Probable cellulose syntha | N/A | no | 0.996 | 0.956 | 0.736 | 0.0 | |
| Q6YVM4 | 1092 | Probable cellulose syntha | no | no | 0.993 | 0.954 | 0.725 | 0.0 | |
| Q94JQ6 | 1084 | Cellulose synthase A cata | yes | no | 0.985 | 0.953 | 0.649 | 0.0 | |
| Q9SJ22 | 1088 | Probable cellulose syntha | no | no | 0.989 | 0.954 | 0.631 | 0.0 | |
| Q8L778 | 1069 | Cellulose synthase A cata | no | no | 0.979 | 0.960 | 0.638 | 0.0 | |
| O48947 | 1084 | Cellulose synthase A cata | no | no | 0.985 | 0.953 | 0.635 | 0.0 | |
| Q6AT26 | 1076 | Probable cellulose syntha | no | no | 0.979 | 0.954 | 0.619 | 0.0 | |
| A2Y0X2 | 1076 | Probable cellulose syntha | N/A | no | 0.979 | 0.954 | 0.619 | 0.0 |
| >sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1580 bits (4092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 809/1098 (73%), Positives = 903/1098 (82%), Gaps = 54/1098 (4%)
Query: 1 MEVSAGLVAGSHNRNELIIIRRDRESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACN 60
ME SAGLVAGSHNRNEL++IRRD + +PL+Q GQ C ICGDDVGL DG +PFVACN
Sbjct: 1 MEASAGLVAGSHNRNELVVIRRDGDPGPKPLRQQNGQVCQICGDDVGLNPDG-EPFVACN 59
Query: 61 ECAFPICRTCYEYERREGNQVCPQCKTRFRRLKGSARVEGDEEEDDIDDLENELNFDGTD 120
ECAFP+CR CYEYERREG Q CPQCKTRF+RL+G ARV GDEEED +DDLENE N+ +
Sbjct: 60 ECAFPVCRDCYEYERREGTQNCPQCKTRFKRLRGCARVPGDEEEDGVDDLENEFNWRDRN 119
Query: 121 RRQHGAEAMLHDHGGNISYGPASDSY----LPKVPLPQVPMLTNGQLVDDTPHEQRALVP 176
Q+ AE+MLH H +SYG P P P VP+LT+GQ+VDD P EQ ALVP
Sbjct: 120 DSQYVAESMLHAH---MSYGRGGVDVNGVPQPFQPNPNVPLLTDGQMVDDIPPEQHALVP 176
Query: 177 SFMGGG-KRIHPFPYSDP---VQPRSLDPSKDLAAYGYGSVAWKERVENWKQKQEKLQSL 232
SFMGGG KRIHP PY+DP VQPRS+DPSKDLAAYGYGSVAWKER+E+WKQKQE+L +
Sbjct: 177 SFMGGGGKRIHPLPYADPNLPVQPRSMDPSKDLAAYGYGSVAWKERMESWKQKQERLHQM 236
Query: 233 NNDTGGKDWGYNIDAPDFPLMDEARQPLSRKIPIPSSQINPYRMIVIIRLVVLGFFFHYR 292
ND GGKDW + D D PLMDEARQPLSRK+PIPSSQINPYRM++IIRLVVLGFFFHYR
Sbjct: 237 RNDGGGKDWDGDGDDGDLPLMDEARQPLSRKVPIPSSQINPYRMVIIIRLVVLGFFFHYR 296
Query: 293 VMHPVKDAYALWVISVICEVWFALSWILDQFPKWLPIDRETYLDRLSLRYEKPGQPSKLM 352
VMHPV DA+ALW+ISVICE+WFA+SWILDQFPKW PI+RETYLDRL+LR++K GQ S+L
Sbjct: 297 VMHPVPDAFALWLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLRFDKEGQTSQLA 356
Query: 353 PVDIFVSTVDPIKEPSLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFA 412
P+D FVSTVDP+KEP LVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFA
Sbjct: 357 PIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFA 416
Query: 413 RKW----------PRAPEWYFAQKIDYLKDKVLASFVRERRAMKREYEQFKVRINALVAK 462
+KW PRAPEWYF QKIDYLKDKV FVRERRAMKREYE+FKVRINALVAK
Sbjct: 417 KKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAPYFVRERRAMKREYEEFKVRINALVAK 476
Query: 463 AQ---------------------------IIFLGPSVGLDTDGNELPRLVYVSREKRPGF 495
AQ +FLG S G D +GNELPRLVYVSREKRPG+
Sbjct: 477 AQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDIEGNELPRLVYVSREKRPGY 536
Query: 496 NNHKKAGAMNALVRVSAVLTNSPYLLNLDCDHYINNSKALREAMCFMMDPLLGKRVCYVQ 555
N+HKKAGAMNALVRVSAVLTN+PY+LNLDCDHYINNSKA++EAMCFMMDPL+GK+VCYVQ
Sbjct: 537 NHHKKAGAMNALVRVSAVLTNAPYMLNLDCDHYINNSKAIKEAMCFMMDPLVGKKVCYVQ 596
Query: 556 FPRRFDGINQDDRFANRKTVFFDINMKGLDGIQGPINVGTGCVFRRQAFYGYDAPKTKKS 615
FP+RFDGI++ DR+ANR VFFDINMKGLDGIQGPI VGTGCVFRRQA YGYDAPKTKK
Sbjct: 597 FPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKTKKP 656
Query: 616 PTRTSKCLPKWCCSGHCCSGRRRKKKINRPKSEIKKKFAM----KDTAPMCAWEGIEEGI 671
P+RT C PKWC CC G R+ KK KKK + ++ +P A IEEG
Sbjct: 657 PSRTCNCWPKWCICC-CCFGDRKSKKKTTKPKTEKKKRSFFKRAENQSPAYALGEIEEGA 715
Query: 672 EGAEGEKSDTLLHQELEKKFGQSPVFVASTLLEDGGTPKSASLASLLKEAIHVISCGYEV 731
GAE EK+ + Q+LEKKFGQS VFVASTLLE+GGT KSAS ASLLKEAIHVISCGYE
Sbjct: 716 PGAENEKAGIVNQQKLEKKFGQSSVFVASTLLENGGTLKSASPASLLKEAIHVISCGYED 775
Query: 732 KTEWGKEVGWIYGSVTKDMLTGLIMHCHGWRSIYCIPDRPAFKGPAPINLSVCLHWVLRW 791
KT+WGKE+GWIYGSVT+D+LTG MHCHGWRSIYCIP PAFKG AP+NLS LH VLRW
Sbjct: 776 KTDWGKEIGWIYGSVTEDILTGFKMHCHGWRSIYCIPKLPAFKGSAPLNLSDRLHQVLRW 835
Query: 792 ALGSVEVFLSRHCPVWYGYGGGLKWLERLSYINACLYPFTSIPLLVYCALPAVCLLTGKF 851
ALGSVE+F S HCP+WYGYGGGLK LER SYIN+ +YPFTSIPLL YC LPA+CLLTGKF
Sbjct: 836 ALGSVEIFFSNHCPLWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKF 895
Query: 852 ITPELTAVAGLYFMSLFMCIFATSILEMRWSGVGIDEWWRNEQFWVIGGISAHPVAVFQG 911
ITPELT VA L+FMSLF+CIFAT ILEMRWSGVGID+WWRNEQFWVIGG+S+H A+FQG
Sbjct: 896 ITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQG 955
Query: 912 LLKVLAGVDTDFTVTSKAGDVEAFSELYAFKWTTLLIPPTTLLIINLVGMVAGVSNAINN 971
LLKV+AG+DT FTVTSK GD E FSELY FKWTTLLIPPTTLL++N +G+VAGVSNAINN
Sbjct: 956 LLKVIAGIDTSFTVTSKGGDDEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINN 1015
Query: 972 GHESWGLLFGKLFFALWVIIHLFPFLKGLIGRHNRISTIVVVWSILLASIFSLLWIRIDP 1031
G+ESWG LFGKLFFA WVI+HL+PFLKGL+GR NR TIV+VWSILLASIFSLLW+RIDP
Sbjct: 1016 GYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDP 1075
Query: 1032 FFAKPDGPLLEECGLDCH 1049
F AK DGPLLEECGLDC+
Sbjct: 1076 FLAKNDGPLLEECGLDCN 1093
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Probable catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Oryza sativa subsp. japonica (taxid: 39947) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6YVM4|CESA6_ORYSJ Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q94JQ6|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9SJ22|CESA9_ARATH Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8L778|CESA5_ARATH Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2 | Back alignment and function description |
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| >sp|O48947|CESA2_ARATH Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6AT26|CESA1_ORYSJ Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Y0X2|CESA1_ORYSI Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1049 | ||||||
| 212960446 | 1093 | cellulose synthase [Betula luminifera] | 0.991 | 0.951 | 0.794 | 0.0 | |
| 225457723 | 1091 | PREDICTED: probable cellulose synthase A | 0.992 | 0.954 | 0.790 | 0.0 | |
| 67003917 | 1097 | cellulose synthase 6 [Eucalyptus grandis | 0.994 | 0.950 | 0.770 | 0.0 | |
| 429326430 | 1087 | cellulose synthase [Populus tomentosa] | 0.987 | 0.953 | 0.772 | 0.0 | |
| 319659269 | 1087 | cellulose synthase [Populus ussuriensis] | 0.987 | 0.953 | 0.773 | 0.0 | |
| 224123130 | 1087 | predicted protein [Populus trichocarpa] | 0.987 | 0.953 | 0.773 | 0.0 | |
| 385718957 | 1087 | cellulose synthase 6 [Paeonia lactiflora | 0.988 | 0.954 | 0.768 | 0.0 | |
| 313671704 | 1087 | cellulose synthase [Populus ussuriensis] | 0.987 | 0.953 | 0.772 | 0.0 | |
| 37781495 | 1087 | cellulose synthase 6 [Populus tremuloide | 0.987 | 0.953 | 0.772 | 0.0 | |
| 225428372 | 1096 | PREDICTED: probable cellulose synthase A | 0.995 | 0.952 | 0.773 | 0.0 |
| >gi|212960446|gb|ACJ38667.1| cellulose synthase [Betula luminifera] | Back alignment and taxonomy information |
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Score = 1731 bits (4483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 876/1102 (79%), Positives = 945/1102 (85%), Gaps = 62/1102 (5%)
Query: 1 MEVSAGLVAGSHNRNELIIIRRDRESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACN 60
ME SAGLVAGSHNRNEL++IRRD ESA RPLQQL GQ C ICGDDVGL VDG + FVACN
Sbjct: 1 MEASAGLVAGSHNRNELVVIRRDGESAPRPLQQLSGQICQICGDDVGLTVDG-ELFVACN 59
Query: 61 ECAFPICRTCYEYERREGNQVCPQCKTRFRRLKGSARVEGDEEEDDIDDLENELNFDG-T 119
ECAFPICRTCYEYERREGNQVCPQCKTRF+RLKG ARV+GDEEED IDDLENE NFD T
Sbjct: 60 ECAFPICRTCYEYERREGNQVCPQCKTRFKRLKGCARVQGDEEEDGIDDLENEFNFDART 119
Query: 120 DRRQH---GAEAMLHDHGGNISYGPASDSYLPKV--PLPQVPMLTNGQLVDDTPHEQRAL 174
+ H A+AMLH YG ASDS LP V PQVP+LTNGQ+VDD P EQ AL
Sbjct: 120 KQDMHHALAADAMLH-------YGRASDSDLPHVIHSTPQVPLLTNGQMVDDIPPEQHAL 172
Query: 175 VPSFMGG---GKRIHPFPYSDP---VQPRSLDPSKDLAAYGYGSVAWKERVENWKQKQEK 228
VPSFMGG GKRIHP P SDP VQPRS+DPSKDLAAYGYGSVAWKER+ENWKQKQ+K
Sbjct: 173 VPSFMGGAGGGKRIHPLPLSDPAFPVQPRSMDPSKDLAAYGYGSVAWKERMENWKQKQDK 232
Query: 229 LQSLNNDTGGKDWGYNIDAPDFPLMDEARQPLSRKIPIPSSQINPYRMIVIIRLVVLGFF 288
LQ + + GKDW Y+ D PD PLMDEARQPLSRK+PIPSSQINPYRMI+IIRLVVLGFF
Sbjct: 233 LQMMKKENSGKDWDYDGDGPDLPLMDEARQPLSRKLPIPSSQINPYRMIIIIRLVVLGFF 292
Query: 289 FHYRVMHPVKDAYALWVISVICEVWFALSWILDQFPKWLPIDRETYLDRLSLRYEKPGQP 348
FHYRVMHPV DA+ALW++SVICE+WFALSWILDQFPKWLPIDRETYLDRLSLRYEK GQP
Sbjct: 293 FHYRVMHPVHDAFALWLVSVICEIWFALSWILDQFPKWLPIDRETYLDRLSLRYEKEGQP 352
Query: 349 SKLMPVDIFVSTVDPIKEPSLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSET 408
S+L PVDIFVSTVDP+KEP LVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSET
Sbjct: 353 SQLCPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSET 412
Query: 409 SEFARKW----------PRAPEWYFAQKIDYLKDKVLASFVRERRAMKREYEQFKVRINA 458
SEFA+KW PRAPE+YFAQK+DYLKDKVL SFV+ERRAMKREYE+FKVRINA
Sbjct: 413 SEFAKKWVPFSKKFNIEPRAPEFYFAQKMDYLKDKVLPSFVKERRAMKREYEEFKVRINA 472
Query: 459 LVAKAQ---------------------------IIFLGPSVGLDTDGNELPRLVYVSREK 491
LVAKAQ +FLG S G DTDGNELPRLVYVSREK
Sbjct: 473 LVAKAQKVPEEGWTMQDGTPWPGNNVRDHPGMIQVFLGQSGGHDTDGNELPRLVYVSREK 532
Query: 492 RPGFNNHKKAGAMNALVRVSAVLTNSPYLLNLDCDHYINNSKALREAMCFMMDPLLGKRV 551
RPGFN+HKKAGAMNALVRVSAVLTN+ Y+LNLDCDHYINNSKALREAMCFMMDPLLGKRV
Sbjct: 533 RPGFNHHKKAGAMNALVRVSAVLTNAAYMLNLDCDHYINNSKALREAMCFMMDPLLGKRV 592
Query: 552 CYVQFPRRFDGINQDDRFANRKTVFFDINMKGLDGIQGPINVGTGCVFRRQAFYGYDAPK 611
CYVQFP+RFDGI+++DR+ANR TVFFDINMKGLDGIQGPI VGTGCVFRRQAFYGYDAPK
Sbjct: 593 CYVQFPQRFDGIDKNDRYANRNTVFFDINMKGLDGIQGPIYVGTGCVFRRQAFYGYDAPK 652
Query: 612 TKKSPTRTSKCLPKWCCSGHCCSGRRRKKKINRPKSEIKKKFAMKD----TAPMCAWEGI 667
KK PTRT CLPKWCC G CCSG+R+KK KSEIKK+ + K +AP+C+ EGI
Sbjct: 653 AKKPPTRTCNCLPKWCCCGCCCSGKRKKKTNKP-KSEIKKRNSRKGDVGASAPVCSLEGI 711
Query: 668 EEGIEGAEGEKSDTLLHQELEKKFGQSPVFVASTLLEDGGTPKSASLASLLKEAIHVISC 727
EEGIEG +GE + Q+LEKKFGQS VFVASTLLEDGGT KSAS ASLLKEAIHVISC
Sbjct: 712 EEGIEGVKGENFPLMSEQKLEKKFGQSSVFVASTLLEDGGTLKSASPASLLKEAIHVISC 771
Query: 728 GYEVKTEWGKEVGWIYGSVTKDMLTGLIMHCHGWRSIYCIPDRPAFKGPAPINLSVCLHW 787
GYE KTEWGKEVGWIYGSVT+D+LTG MHCHGWRSIYCIPDRPAFKG APINLS LH
Sbjct: 772 GYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSIYCIPDRPAFKGSAPINLSDRLHQ 831
Query: 788 VLRWALGSVEVFLSRHCPVWYGYGGGLKWLERLSYINACLYPFTSIPLLVYCALPAVCLL 847
VLRWALGSVE+FLSRHCP+WYGYGGGLKWLERLSYINA +YP+TSIPLL YC LPAVCLL
Sbjct: 832 VLRWALGSVEIFLSRHCPLWYGYGGGLKWLERLSYINATVYPWTSIPLLAYCTLPAVCLL 891
Query: 848 TGKFITPELTAVAGLYFMSLFMCIFATSILEMRWSGVGIDEWWRNEQFWVIGGISAHPVA 907
TGKFITPELT VA L+F+SLF+CIFATSILEMRWSGVGIDEWWRNEQFWVIGG+SAH A
Sbjct: 892 TGKFITPELTNVASLWFLSLFICIFATSILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFA 951
Query: 908 VFQGLLKVLAGVDTDFTVTSKAGDVEAFSELYAFKWTTLLIPPTTLLIINLVGMVAGVSN 967
VFQGLLKVLAGVDT+FTVTSKAGD AFSELYAFKWTTLLIPPTTLLIINL+G+VAGVSN
Sbjct: 952 VFQGLLKVLAGVDTNFTVTSKAGDDAAFSELYAFKWTTLLIPPTTLLIINLIGVVAGVSN 1011
Query: 968 AINNGHESWGLLFGKLFFALWVIIHLFPFLKGLIGRHNRISTIVVVWSILLASIFSLLWI 1027
AINNG+ESWG LFGKLFFA WVI+HL+PFLKGL+GR NR TI++VWSILLASIFSLLW+
Sbjct: 1012 AINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLLGRQNRTPTIIIVWSILLASIFSLLWV 1071
Query: 1028 RIDPFFAKPDGPLLEECGLDCH 1049
RIDPF AK GP+LEECGLDC+
Sbjct: 1072 RIDPFLAKSKGPVLEECGLDCN 1093
|
Source: Betula luminifera Species: Betula luminifera Genus: Betula Family: Betulaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225457723|ref|XP_002277713.1| PREDICTED: probable cellulose synthase A catalytic subunit 5 [UDP-forming] [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|67003917|gb|AAY60848.1| cellulose synthase 6 [Eucalyptus grandis] | Back alignment and taxonomy information |
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| >gi|429326430|gb|AFZ78555.1| cellulose synthase [Populus tomentosa] | Back alignment and taxonomy information |
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| >gi|319659269|gb|ADV58936.1| cellulose synthase [Populus ussuriensis] | Back alignment and taxonomy information |
|---|
| >gi|224123130|ref|XP_002319002.1| predicted protein [Populus trichocarpa] gi|222857378|gb|EEE94925.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|385718957|gb|AFI71895.1| cellulose synthase 6 [Paeonia lactiflora] | Back alignment and taxonomy information |
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| >gi|313671704|gb|ADR74043.1| cellulose synthase [Populus ussuriensis] | Back alignment and taxonomy information |
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| >gi|37781495|gb|AAP40636.1| cellulose synthase 6 [Populus tremuloides] | Back alignment and taxonomy information |
|---|
| >gi|225428372|ref|XP_002283406.1| PREDICTED: probable cellulose synthase A catalytic subunit 3 [UDP-forming]-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1049 | ||||||
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.549 | 0.529 | 0.652 | 0.0 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.549 | 0.531 | 0.649 | 0.0 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.552 | 0.535 | 0.643 | 0.0 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.550 | 0.539 | 0.643 | 0.0 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.546 | 0.538 | 0.641 | 0.0 | |
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.538 | 0.522 | 0.624 | 0.0 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.532 | 0.524 | 0.621 | 0.0 | |
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.353 | 0.353 | 0.678 | 0.0 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.353 | 0.361 | 0.677 | 0.0 | |
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.591 | 0.630 | 0.595 | 5.3e-303 |
| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2058 (729.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 381/584 (65%), Positives = 458/584 (78%)
Query: 466 IFLGPSVGLDTDGNELPRLVYVSREKRPGFNNHKKAGAMNALVRVSAVLTNSPYLLNLDC 525
+FLG S D DGNELPRLVYVSREKRPGF++HKKAGAMN+L+RVSAVL+N+PYLLN+DC
Sbjct: 510 VFLGHSGVCDMDGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDC 569
Query: 526 DHYINNSKALREAMCFMMDPLLGKRVCYVQFPRRFDGINQDDRFANRKTVFFDINMKGLD 585
DHYINNSKA+REAMCFMMDP GK++CYVQFP+RFDGI++ DR++NR VFFDINMKGLD
Sbjct: 570 DHYINNSKAIREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLD 629
Query: 586 GIQGPINVGTGCVFRRQAFYGYDAXXXXXXXXXXXXCLPKWXXXXXXXXXXXXKKKINRP 645
GIQGPI VGTGCVFRRQA YG+DA C PKW KKK +
Sbjct: 630 GIQGPIYVGTGCVFRRQALYGFDAPKKKQPPGRTCNCWPKWCCLCCGMR----KKKTGKV 685
Query: 646 KSEIKKKFAMKDTAPMCAWXXXXXXXXXXXXXKSDTLLHQ-ELEKKFGQSPVFVASTLLE 704
K +KK K+T+ ++++ Q +LEKKFGQSPV VASTLL
Sbjct: 686 KDNQRKK--PKETSKQIHALEHIEEGLQVTNAENNSETAQLKLEKKFGQSPVLVASTLLL 743
Query: 705 DGGTPKSASLASLLKEAIHVISCGYEVKTEWGKEVGWIYGSVTKDMLTGLIMHCHGWRSI 764
+GG P + + ASLL+E+I VISCGYE KTEWGKE+GWIYGSVT+D+LTG MHCHGWRS+
Sbjct: 744 NGGVPSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSV 803
Query: 765 YCIPDRPAFKGPAPINLSVCLHWVLRWALGSVEVFLSRHCPVWYGYGGGLKWLERLSYIN 824
YC+P R AFKG APINLS LH VLRWALGSVE+FLSRHCP+WYGYGGGLKWLER SYIN
Sbjct: 804 YCMPKRAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYIN 863
Query: 825 ACLYPFTSIPLLVYCALPAVCLLTGKFITPELTAVAGLYFMSLFMCIFATSILEMRWSGV 884
+ +YP+TS+PLLVYC+LPA+CLLTGKFI PE++ AG+ F+ +FM I T ILEM+W +
Sbjct: 864 SVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKI 923
Query: 885 GIDEWWRNEQFWVIGGISAHPVAVFQGLLKVLAGVDTDFTVTSKAGDVEAFSELYAFKWX 944
GID+WWRNEQFWVIGG+S+H A+FQGLLKVLAGV T+FTVTSKA D FSELY FKW
Sbjct: 924 GIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAADDGEFSELYIFKWT 983
Query: 945 XXXXXXXXXXXXNLVGMVAGVSNAINNGHESWGLLFGKLFFALWVIIHLFPFLKGLIGRH 1004
N+VG++ GVS+AINNG++SWG LFG+LFFALWVI+HL+PFLKGL+G+
Sbjct: 984 SLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQ 1043
Query: 1005 NRISTIVVVWSILLASIFSLLWIRIDPFFAKPDGPLLEECGLDC 1048
+R+ TI++VWSILLASI +LLW+R++PF +K DGP+LE CGLDC
Sbjct: 1044 DRVPTIILVWSILLASILTLLWVRVNPFVSK-DGPVLEICGLDC 1086
|
|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2XN66 | CESA2_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6206 | 0.9475 | 0.9263 | N/A | no |
| A2Z1C8 | CESA9_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6228 | 0.9456 | 0.9402 | N/A | no |
| Q94JQ6 | CESA6_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.6490 | 0.9857 | 0.9538 | yes | no |
| Q6YVM4 | CESA6_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7252 | 0.9933 | 0.9542 | no | no |
| A2XNT2 | CESA5_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.7363 | 0.9961 | 0.9569 | N/A | no |
| Q69V23 | CESA3_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7367 | 0.9952 | 0.9551 | yes | no |
| A2Y0X2 | CESA1_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6198 | 0.9790 | 0.9544 | N/A | no |
| Q851L8 | CESA5_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7363 | 0.9961 | 0.9569 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 4th Layer | 2.4.1.12 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00002977001 | SubName- Full=Chromosome chr18 scaffold_137, whole genome shotgun sequence; (1091 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1049 | |||
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 7e-94 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 3e-73 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 2e-69 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 1e-49 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 1e-33 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 9e-12 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 1e-11 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 6e-11 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 4e-10 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 1e-08 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 2e-08 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 3e-06 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 2e-05 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 1e-04 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 8e-04 | |
| pfam14446 | 55 | pfam14446, Prok-RING_1, Prokaryotic RING finger fa | 8e-04 |
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
Score = 1731 bits (4485), Expect = 0.0
Identities = 739/1100 (67%), Positives = 873/1100 (79%), Gaps = 59/1100 (5%)
Query: 1 MEVSAGLVAGSHNRNELIIIRRDRESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACN 60
M L+AGSHNRNE ++I D + R +Q+L GQ C ICGD++ L VDG +PFVACN
Sbjct: 1 MNTGGRLIAGSHNRNEFVLINADEIARIRSVQELSGQTCQICGDEIELTVDG-EPFVACN 59
Query: 61 ECAFPICRTCYEYERREGNQVCPQCKTRFRRLKGSARVEGDEEEDDIDDLENELNFDGTD 120
ECAFP+CR CYEYERREGNQ CPQCKTR++R+KGS RVEGDEEEDDIDDLENE ++
Sbjct: 60 ECAFPVCRPCYEYERREGNQACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNG 119
Query: 121 RR-QHGAEAMLHDH----GGNISYGPASDSYLPKVPL-PQVPMLTNGQLVDDTPHEQRAL 174
+ AEAML + G A+ S L P Q+P+LT G+ + ++ AL
Sbjct: 120 LDPEQVAEAMLSSRLNTGRHSNVSGIATPSELDSAPPGSQIPLLTYGEEDVEISSDRHAL 179
Query: 175 -VPSFMGGGKRIHPFPYSDP---VQPRSLDPSKDLAAYGYGSVAWKERVENWKQKQ-EKL 229
VP G G R+HP P+ D +QPR + P KDLA YGYGSVAWK+R+E WK+KQ EKL
Sbjct: 180 IVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQNEKL 239
Query: 230 QSLNNDTGGKDWGYN----IDAPDFPLMDEARQPLSRKIPIPSSQINPYRMIVIIRLVVL 285
Q + ++ GG D G N +D PD P+MDE RQPLSRK+PIPSS+INPYRMI+I+RLV+L
Sbjct: 240 QVVKHE-GGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVIL 298
Query: 286 GFFFHYRVMHPVKDAYALWVISVICEVWFALSWILDQFPKWLPIDRETYLDRLSLRYEKP 345
G FFHYR++HPV DAY LW+ SVICE+WFA+SWILDQFPKW PI+RETYLDRLSLRYEK
Sbjct: 299 GLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKE 358
Query: 346 GQPSKLMPVDIFVSTVDPIKEPSLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEAL 405
G+PS+L VD+FVSTVDP+KEP L+TANTVLSILAVDYPVDKV+CYVSDDGAAMLTFEAL
Sbjct: 359 GKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEAL 418
Query: 406 SETSEFARKW----------PRAPEWYFAQKIDYLKDKVLASFVRERRAMKREYEQFKVR 455
SETSEFARKW PRAPEWYF+QK+DYLK+KV +FVRERRAMKREYE+FKV+
Sbjct: 419 SETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVK 478
Query: 456 INALVAKAQII---------------------------FLGPSVGLDTDGNELPRLVYVS 488
INALVA AQ + FLG S D +GNELPRLVYVS
Sbjct: 479 INALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVS 538
Query: 489 REKRPGFNNHKKAGAMNALVRVSAVLTNSPYLLNLDCDHYINNSKALREAMCFMMDPLLG 548
REKRPGF++HKKAGAMN+L+RVSAVL+N+PYLLN+DCDHYINNSKALREAMCFMMDP G
Sbjct: 539 REKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSG 598
Query: 549 KRVCYVQFPRRFDGINQDDRFANRKTVFFDINMKGLDGIQGPINVGTGCVFRRQAFYGYD 608
K++CYVQFP+RFDGI++ DR++NR VFFDINMKGLDGIQGPI VGTGCVFRRQA YGYD
Sbjct: 599 KKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD 658
Query: 609 APKTKKSPTRTSKCLPKWCCSGHCCSGRRRKKKINRPKSEIKKKFAMKDTAPMCAWEGIE 668
APK KK P +T C PKWCC C G R+KKK + K + KKK + + + A E IE
Sbjct: 659 APKKKKPPGKTCNCWPKWCC---LCCGSRKKKKKKKSKEKKKKK-NREASKQIHALENIE 714
Query: 669 EGIEGAEGEKSDTLLHQELEKKFGQSPVFVASTLLEDGGTPKSASLASLLKEAIHVISCG 728
EGIEG+ EKS +LEKKFGQSPVFVASTLLE+GG P++AS ASLL+EAI VISCG
Sbjct: 715 EGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCG 774
Query: 729 YEVKTEWGKEVGWIYGSVTKDMLTGLIMHCHGWRSIYCIPDRPAFKGPAPINLSVCLHWV 788
YE KTEWGKE+GWIYGSVT+D+LTG MHCHGWRS+YCIP RPAFKG APINLS LH V
Sbjct: 775 YEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQV 834
Query: 789 LRWALGSVEVFLSRHCPVWYGYGGGLKWLERLSYINACLYPFTSIPLLVYCALPAVCLLT 848
LRWALGSVE+FLSRHCP+WYGYGGGLKWLER SYIN+ +YP+TSIPL+VYC LPA+CLLT
Sbjct: 835 LRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLT 894
Query: 849 GKFITPELTAVAGLYFMSLFMCIFATSILEMRWSGVGIDEWWRNEQFWVIGGISAHPVAV 908
GKFI PE++ A + FM+LF+ I AT ILEM+W GVGID+WWRNEQFWVIGG+S+H A+
Sbjct: 895 GKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFAL 954
Query: 909 FQGLLKVLAGVDTDFTVTSKAGDVEAFSELYAFKWTTLLIPPTTLLIINLVGMVAGVSNA 968
FQGLLKVLAGV+T+FTVTSKA D FSELY FKWT+LLIPPTTLLIIN++G++ GVS+A
Sbjct: 955 FQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLLIPPTTLLIINIIGVIVGVSDA 1014
Query: 969 INNGHESWGLLFGKLFFALWVIIHLFPFLKGLIGRHNRISTIVVVWSILLASIFSLLWIR 1028
INNG++SWG LFG+LFFALWVI+HL+PFLKGL+G+ +R+ TI++VWSILLASI +LLW+R
Sbjct: 1015 INNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVR 1074
Query: 1029 IDPFFAKPDGPLLEECGLDC 1048
++PF +K GP+LE CGLDC
Sbjct: 1075 VNPFVSK-GGPVLEICGLDC 1093
|
Length = 1094 |
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1049 | |||
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 100.0 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 100.0 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.97 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.97 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.96 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.95 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.95 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.95 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.93 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.93 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.91 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.89 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.89 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.88 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.87 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.86 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.83 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.83 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.81 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.75 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.71 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.66 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.65 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.58 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.56 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.5 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.38 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 99.36 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 99.35 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 99.3 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 99.3 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 99.3 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 99.29 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 99.27 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.26 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 99.24 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 99.24 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 99.22 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 99.21 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 99.18 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 99.16 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 99.13 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 99.05 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 99.03 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 99.02 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.01 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 99.0 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 98.83 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.82 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 98.82 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 98.77 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.67 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.66 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 98.58 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 98.49 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 98.38 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 98.31 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 98.07 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 97.93 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 97.58 | |
| KOG2978 | 238 | consensus Dolichol-phosphate mannosyltransferase [ | 96.99 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 96.78 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 95.49 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 94.54 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 93.91 | |
| KOG3737 | 603 | consensus Predicted polypeptide N-acetylgalactosam | 93.4 | |
| KOG3736 | 578 | consensus Polypeptide N-acetylgalactosaminyltransf | 91.9 | |
| KOG2977 | 323 | consensus Glycosyltransferase [General function pr | 90.97 | |
| KOG3738 | 559 | consensus Predicted polypeptide N-acetylgalactosam | 89.2 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 88.51 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 87.98 | |
| KOG2068 | 327 | consensus MOT2 transcription factor [Transcription | 86.26 | |
| KOG3800 | 300 | consensus Predicted E3 ubiquitin ligase containing | 84.91 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 84.69 | |
| PRK14503 | 393 | mannosyl-3-phosphoglycerate synthase; Provisional | 83.12 | |
| PHA02929 | 238 | N1R/p28-like protein; Provisional | 82.12 | |
| PF13704 | 97 | Glyco_tranf_2_4: Glycosyl transferase family 2 | 81.69 | |
| PF03452 | 269 | Anp1: Anp1; InterPro: IPR005109 The members of thi | 80.97 |
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-304 Score=2678.05 Aligned_cols=1040 Identities=70% Similarity=1.263 Sum_probs=968.2
Q ss_pred CCCCccccccccCCceEEEeeccCccCCCccCccCCcccCCcCCCCcCCCCCCCceeccCCCCCccchhhHHHHHhhcCC
Q 045222 1 MEVSAGLVAGSHNRNELIIIRRDRESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACNECAFPICRTCYEYERREGNQ 80 (1049)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CqiCgd~vg~~~~~G~~FvaC~eC~FpvCRpCYeyerkeg~q 80 (1049)
||+++|||||||||||||+++.|++.++||++++++|+||||||+||+|+| ||+|||||||+|||||||||||||||+|
T Consensus 1 m~~~~~~~~gs~~r~e~~~~~~d~~~~~k~~~~~~~~iCqICGD~Vg~t~d-Ge~FVACn~C~fpvCr~Cyeyer~eg~~ 79 (1094)
T PLN02436 1 MNTGGRLIAGSHNRNEFVLINADEIARIRSVQELSGQTCQICGDEIELTVD-GEPFVACNECAFPVCRPCYEYERREGNQ 79 (1094)
T ss_pred CCcccccccccccccceeEeccccccCCCCccccCCccccccccccCcCCC-CCEEEeeccCCCccccchhhhhhhcCCc
Confidence 999999999999999999999997667799999999999999999999999 9999999999999999999999999999
Q ss_pred CCCCCccccccccCCcccCCCCccccchhhhhhccCCC-CCccccchhhhcccCCCCCcCCCCCCCCC----C--CC--C
Q 045222 81 VCPQCKTRFRRLKGSARVEGDEEEDDIDDLENELNFDG-TDRRQHGAEAMLHDHGGNISYGPASDSYL----P--KV--P 151 (1049)
Q Consensus 81 ~CPqCkt~Ykr~kgsprv~gd~~~~~~~d~e~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~--~ 151 (1049)
+|||||||||||||||||+||||||++||+||||++.+ +++.++++|+|+|++ |+||++.+-.. + +. .
T Consensus 80 ~Cpqckt~Y~r~kgs~~~~~d~ee~~~dd~e~ef~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 156 (1094)
T PLN02436 80 ACPQCKTRYKRIKGSPRVEGDEEEDDIDDLENEFDYGNNGLDPEQVAEAMLSSR---LNTGRHSNVSGIATPSELDSAPP 156 (1094)
T ss_pred cCcccCCchhhccCCCCcCCccccccchhhhhhhcCcccccchHHHHHHHhhhh---cccCccccccccccccccccCCC
Confidence 99999999999999999999999999999999999873 333477899999998 99998865111 1 12 1
Q ss_pred CCCCCcccCCCcCCCCCccccc-ccCCcCCCCcccccCCCCCC---CCCCCCCCCcCcccCCCCccccchhhHHHHHHHH
Q 045222 152 LPQVPMLTNGQLVDDTPHEQRA-LVPSFMGGGKRIHPFPYSDP---VQPRSLDPSKDLAAYGYGSVAWKERVENWKQKQE 227 (1049)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~w~~~~~~~~~~~~ 227 (1049)
.+++|++++||.++|++++|++ ++++.+|.||||||+||+|+ .+++.+||+||+++|||||++||||||+||+||+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wkerv~~wk~kq~ 236 (1094)
T PLN02436 157 GSQIPLLTYGEEDVEISSDRHALIVPPSTGHGNRVHPMPFPDSSASLQPRPMVPQKDLAVYGYGSVAWKDRMEEWKKKQN 236 (1094)
T ss_pred cCCCcccccCcccCccCCcccccccCCcccccccccccccccccccCCCccCCccccccccccCcHHHHHHHHHHHhhhh
Confidence 2467999999988999855655 47787888999999999996 7889999999999999999999999999999997
Q ss_pred hhh-cccCCC--CCCCCC-CCCCCCCcccccccCCCceeeeccCCCCcchhHHHHHHHHHHHHHHHhhhhcccccchhHH
Q 045222 228 KLQ-SLNNDT--GGKDWG-YNIDAPDFPLMDEARQPLSRKIPIPSSQINPYRMIVIIRLVVLGFFFHYRVMHPVKDAYAL 303 (1049)
Q Consensus 228 ~~~-~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~pl~~k~~~~~~~~~~yR~~iv~~lv~l~~yl~wRi~~~~~~a~~l 303 (1049)
|+. ++.+.. ...+.+ ++.+++|++++|++++||+||+++++++|+|||++++++++++++||+||++|++.+++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~ 316 (1094)
T PLN02436 237 EKLQVVKHEGGNDGGNNDGDELDDPDLPMMDEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGL 316 (1094)
T ss_pred hcccccccccccccCCCCCCCCCCcccccccccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHH
Confidence 433 333321 112221 3334678888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCccccccccchhhhhhhhccCCCCCCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCC
Q 045222 304 WVISVICEVWFALSWILDQFPKWLPIDRETYLDRLSLRYEKPGQPSKLMPVDIFVSTVDPIKEPSLVTANTVLSILAVDY 383 (1049)
Q Consensus 304 Wl~~~i~Eiwfa~~wiL~q~~kw~Pv~R~t~~drL~~r~~~~~~~~~lP~VDVfV~t~nP~kEpp~vv~~Tvls~lalDY 383 (1049)
|+++++||+||+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||+|+||.||||++|+|||||+||+||
T Consensus 317 Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DY 396 (1094)
T PLN02436 317 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDY 396 (1094)
T ss_pred HHHHHHHHHHHHHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred CCCCeEEEEEcCCCChhhHHHhhhhHHHhhhC----------CCCchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 045222 384 PVDKVSCYVSDDGAAMLTFEALSETSEFARKW----------PRAPEWYFAQKIDYLKDKVLASFVRERRAMKREYEQFK 453 (1049)
Q Consensus 384 P~~kl~vyV~DDG~s~~Tf~al~Ea~~fA~~W----------pr~Pe~YF~~k~~~lk~~~~~~fv~err~~kr~yee~k 453 (1049)
|++||+|||||||++++|||||.||++|||+| ||+||+||++|.+++++|++++|++|||+|||||||||
T Consensus 397 P~eKlscYvSDDGgS~LTf~AL~EAa~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K 476 (1094)
T PLN02436 397 PVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFK 476 (1094)
T ss_pred cccceEEEEecCCchHHHHHHHHHHHHHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh---------------------------hhcCCCCCCCCCCCCCCcEEEEeccCCCCCCCCChHHHHHH
Q 045222 454 VRINALVAKAQI---------------------------IFLGPSVGLDTDGNELPRLVYVSREKRPGFNNHKKAGAMNA 506 (1049)
Q Consensus 454 vRIn~l~~~a~k---------------------------v~lg~~g~~d~~~~~lP~lvYvsRekrpg~~h~~KAGALN~ 506 (1049)
+|||+|++++++ |+|+++|+.|.+|++||+||||||||||||+||+||||||+
T Consensus 477 ~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNa 556 (1094)
T PLN02436 477 VKINALVATAQKVPEDGWTMQDGTPWPGNNVRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNS 556 (1094)
T ss_pred HHHHHHHhhcccCchhhhhhccCccCCCCCCCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhh
Confidence 999999986332 88999988999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCEEEEecCCCCCChHHHHHHHHHhhcCCCCCceeEEEecCccccCCCCccccchhhhhhHhhhcccccc
Q 045222 507 LVRVSAVLTNSPYLLNLDCDHYINNSKALREAMCFMMDPLLGKRVCYVQFPRRFDGINQDDRFANRKTVFFDINMKGLDG 586 (1049)
Q Consensus 507 ~lrvSav~tng~~Il~lDaD~~~~~p~~Lr~~m~ff~Dp~~g~~v~~VQ~PQ~F~nid~~D~yan~~~vFfdi~~~glDg 586 (1049)
++||||++||||||||||||||+|||+++|++|||||||+.|+++|||||||+|+|+|++|||+||++||||++|+|+||
T Consensus 557 LlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDG 636 (1094)
T PLN02436 557 LIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDG 636 (1094)
T ss_pred hhhhheeecCCceEEecccccccCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCCcCCCCcccCcccccccCCCchhhhhhhhcccCCccccccc
Q 045222 587 IQGPINVGTGCVFRRQAFYGYDAPKTKKSPTRTSKCLPKWCCSGHCCSGRRRKKKINRPKSEIKKKFAMKDTAPMCAWEG 666 (1049)
Q Consensus 587 ~qgp~yvGTgcvfRR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~c~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1049)
+|||+||||||+|||+||||++||...+.+...++||+.||| +||+.|+++++..+... ++.+......+++++++
T Consensus 637 lqGP~YvGTGC~frR~aLYG~~pp~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 712 (1094)
T PLN02436 637 IQGPIYVGTGCVFRRQALYGYDAPKKKKPPGKTCNCWPKWCC---LCCGSRKKKKKKKSKEK-KKKKNREASKQIHALEN 712 (1094)
T ss_pred CCCccccccCceeeeeeeeccCCccccccccccccccccccc---ccccccccccccccccc-ccccccccccccccccc
Confidence 999999999999999999999999877766667889999997 47777776443221111 11101122457888999
Q ss_pred hhccccccccccchhhhhHHHHHhhCCcHHHHhhhhhhcCCCCCCcchhhHHHHHHHhhccccccccccccccccccccc
Q 045222 667 IEEGIEGAEGEKSDTLLHQELEKKFGQSPVFVASTLLEDGGTPKSASLASLLKEAIHVISCGYEVKTEWGKEVGWIYGSV 746 (1049)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~s~l~e~GG~~~~~~~~~~~~eA~~v~sc~YE~~T~WG~evGW~ygsv 746 (1049)
++++++++++|++..+++++++++||+|++|++|++++.||.+...+++++++||+|||||+||++|+||+||||+|||+
T Consensus 713 ~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSv 792 (1094)
T PLN02436 713 IEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVASTLLENGGVPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSV 792 (1094)
T ss_pred cccccccccchhhhhhhhhhHHhhhcccHHHHHHHHHhhcCCCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccce
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHCCcEEEEecCCCCccccCCCcCHHHHHhhhheecccchhhhhhccCccccccCCCCChhhhHhHHhhh
Q 045222 747 TKDMLTGLIMHCHGWRSIYCIPDRPAFKGPAPINLSVCLHWVLRWALGSVEVFLSRHCPVWYGYGGGLKWLERLSYINAC 826 (1049)
Q Consensus 747 TEDi~Tg~rLh~rGWrSvY~~~~~~Af~GlaP~tl~~~l~QR~RWA~G~lQI~lsr~~Pl~~g~~~~Ltl~QRL~Yl~s~ 826 (1049)
|||+.||++||++||||+||+|.++||.|+||+|+.++++||+|||+|++|||++|+||+|||+.++|+|+||++|++++
T Consensus 793 TEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ 872 (1094)
T PLN02436 793 TEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSV 872 (1094)
T ss_pred ecHHHHHHHHHcCCCceEeCCCCchhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999887899999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhCCcchhhchHHHHHHHHHHHHHHHHHhhhheeeccccccccccchhHHHhhhhhhHHH
Q 045222 827 LYPFTSIPLLVYCALPAVCLLTGKFITPELTAVAGLYFMSLFMCIFATSILEMRWSGVGIDEWWRNEQFWVIGGISAHPV 906 (1049)
Q Consensus 827 ly~l~sl~~liylllP~l~LltG~~iip~~s~~~~~~fi~lfls~~~~~lLe~rwsGvsi~~wWr~e~~W~I~~~sa~Lf 906 (1049)
+||++++++++|+++|++||++|++++|.++.+++++|+++|+++++++++|++|+|+++++||||||||+|+++|+|+|
T Consensus 873 ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lf 952 (1094)
T PLN02436 873 VYPWTSIPLIVYCTLPAICLLTGKFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLF 952 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCeEeccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhhHHHHHHH
Q 045222 907 AVFQGLLKVLAGVDTDFTVTSKAGDVEAFSELYAFKWTTLLIPPTTLLIINLVGMVAGVSNAINNGHESWGLLFGKLFFA 986 (1049)
Q Consensus 907 Av~~aLlkvl~g~~~~F~VT~K~~~~~~~~~ly~f~wt~l~iP~~tllilnlv~iv~gi~~~~~~~~~~w~~l~g~l~~~ 986 (1049)
|++++++|+|+|++++|+||+|..+++.++++|+|+||++++|++|++++|++|+++|+++++++++++|+++++++||+
T Consensus 953 avl~~iLKvLggs~~~F~VTsK~~d~~~~a~ly~f~~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~ 1032 (1094)
T PLN02436 953 ALFQGLLKVLAGVNTNFTVTSKAADDGEFSELYLFKWTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFA 1032 (1094)
T ss_pred HHHHHHHHHhccCcccceecccccccccccceeeecceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Confidence 99999999999999999999999887778899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCCccchhHHHHHHHHHHHHHhheeeecCCCcCCCCCccccccCCCC
Q 045222 987 LWVIIHLFPFLKGLIGRHNRISTIVVVWSILLASIFSLLWIRIDPFFAKPDGPLLEECGLDCH 1049 (1049)
Q Consensus 987 ~Wvi~~l~Pf~~gL~gR~~~~P~~v~~~s~~la~~~~llwv~i~~~~~~~~~~~~~~~~~~~~ 1049 (1049)
+||++|+|||+||||||++|+||||++||++||++||||||+||||+++ +||++++||++|+
T Consensus 1033 ~wvvv~lyPf~kgL~gr~~r~P~~v~v~s~lla~~~~l~~v~~~~~~~~-~~~~~~~~~~~~~ 1094 (1094)
T PLN02436 1033 LWVIVHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVSK-GGPVLEICGLDCD 1094 (1094)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeeehHHHHHHHHHHHHHHeeeccccCC-CCccccccCccCC
Confidence 9999999999999999999999999999999999999999999999999 9999999999996
|
|
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2977 consensus Glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
| >KOG2068 consensus MOT2 transcription factor [Transcription] | Back alignment and domain information |
|---|
| >KOG3800 consensus Predicted E3 ubiquitin ligase containing RING finger, subunit of transcription/repair factor TFIIH and CDK-activating kinase assembly factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
| >PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PHA02929 N1R/p28-like protein; Provisional | Back alignment and domain information |
|---|
| >PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 | Back alignment and domain information |
|---|
| >PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1049 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 5e-20 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 4e-05 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 144 bits (363), Expect = 8e-41
Identities = 58/91 (63%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Query: 23 DRESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACNECAFPICRTCYEYERREGNQVC 82
S +PL+ L GQ C ICGD +GL V+G D FVACNEC FP CR CYEYERREG Q C
Sbjct: 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEG-DLFVACNECGFPACRPCYEYERREGTQNC 61
Query: 83 PQCKTRFRRLKGSARVEGDEEEDDIDDLENE 113
PQCKTR++RL+GS RVEGDE+E+DID +
Sbjct: 62 PQCKTRYKRLRGSPRVEGDEDEEDIDSGPSS 92
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} Length = 153 | Back alignment and structure |
|---|
| >2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 76 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1049 | |||
| 4hg6_A | 802 | Cellulose synthase subunit A; membrane translocati | 100.0 | |
| 1weo_A | 93 | Cellulose synthase, catalytic subunit (IRX3); stru | 100.0 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.61 | |
| 1xhb_A | 472 | Polypeptide N-acetylgalactosaminyltransferase 1; g | 99.58 | |
| 3bcv_A | 240 | Putative glycosyltransferase protein; protein stru | 99.58 | |
| 2d7i_A | 570 | Polypeptide N-acetylgalactosaminyltransferase 10; | 99.54 | |
| 1qg8_A | 255 | Protein (spore coat polysaccharide biosynthesis P | 99.54 | |
| 2ffu_A | 501 | Ppgalnact-2, polypeptide N-acetylgalactosaminyltra | 99.49 | |
| 2z86_A | 625 | Chondroitin synthase; GT-A, glycosyltransferase A, | 99.44 | |
| 3ckj_A | 329 | Putative uncharacterized protein; mycobacteria, un | 99.21 | |
| 4fix_A | 657 | UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 | 99.15 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 99.15 | |
| 2fy7_A | 287 | Beta-1,4-galactosyltransferase 1; M339H mutant, AP | 98.97 | |
| 3f1y_A | 387 | Mannosyl-3-phosphoglycerate synthase; GT-A type gl | 98.75 | |
| 2nxv_A | 249 | ATP synthase subunits region ORF 6; majastridin, A | 98.33 | |
| 2bo4_A | 397 | Mannosylglycerate synthase; catalysis, glycosyltra | 97.42 | |
| 1e4u_A | 78 | Transcriptional repressor NOT4; gene regulation, t | 97.06 | |
| 2zu9_A | 394 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, g | 97.01 | |
| 1fo8_A | 343 | Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl | 96.89 | |
| 2wvl_A | 391 | Mannosyl-3-phosphoglycerate synthase; GT-A fold, t | 96.71 | |
| 2ea6_A | 69 | Ring finger protein 4; RNF4, RES4-26, ring domain, | 89.62 | |
| 2d8s_A | 80 | Cellular modulator of immune recognition; C-MIR, m | 88.97 | |
| 2ect_A | 78 | Ring finger protein 126; metal binding protein, st | 88.43 | |
| 3ng2_A | 71 | RNF4, snurf, ring finger protein 4; ring domain, E | 88.23 | |
| 1t1h_A | 78 | Gspef-atpub14, armadillo repeat containing protein | 87.5 | |
| 1vyx_A | 60 | ORF K3, K3RING; zinc-binding protein, ring domain, | 87.09 | |
| 2ecy_A | 66 | TNF receptor-associated factor 3; metal binding pr | 86.88 | |
| 2csz_A | 76 | Synaptotagmin-like protein 4; exophilin 2, granuph | 86.76 | |
| 2ckl_B | 165 | Ubiquitin ligase protein RING2; BMI1, RING1B, poly | 86.24 | |
| 1chc_A | 68 | Equine herpes virus-1 ring domain; viral protein; | 84.58 | |
| 2ct2_A | 88 | Tripartite motif protein 32; zinc-finger protein H | 84.57 | |
| 1iym_A | 55 | EL5; ring-H2 finger, ubiquitin ligase, DNA binding | 84.53 | |
| 2xeu_A | 64 | Ring finger protein 4; transcription, zinc-finger, | 84.4 | |
| 2ecm_A | 55 | Ring finger and CHY zinc finger domain- containing | 84.12 | |
| 1g25_A | 65 | CDK-activating kinase assembly factor MAT1; ring f | 83.9 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 83.4 | |
| 2ysl_A | 73 | Tripartite motif-containing protein 31; ring-type | 82.9 | |
| 2f42_A | 179 | STIP1 homology and U-box containing protein 1; cha | 82.79 | |
| 2kiz_A | 69 | E3 ubiquitin-protein ligase arkadia; ring-H2 finge | 82.48 | |
| 1v87_A | 114 | Deltex protein 2; ring-H2 domain, zinc-binding dom | 81.9 | |
| 3fl2_A | 124 | E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA | 81.17 | |
| 1x4j_A | 75 | Ring finger protein 38; structural genomics, NPPSF | 80.87 | |
| 2ecv_A | 85 | Tripartite motif-containing protein 5; metal bindi | 80.38 |
| >4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-52 Score=507.68 Aligned_cols=492 Identities=21% Similarity=0.315 Sum_probs=374.6
Q ss_pred hHH-HHHHHHHHHHHHHhhhhcccccc-----hhHHHHHHHHHHHHHHHHHHHhhcCccccccccchhhhhhhhccCCCC
Q 045222 274 YRM-IVIIRLVVLGFFFHYRVMHPVKD-----AYALWVISVICEVWFALSWILDQFPKWLPIDRETYLDRLSLRYEKPGQ 347 (1049)
Q Consensus 274 yR~-~iv~~lv~l~~yl~wRi~~~~~~-----a~~lWl~~~i~Eiwfa~~wiL~q~~kw~Pv~R~t~~drL~~r~~~~~~ 347 (1049)
.|+ ++++.+++.+.|++||++.+++. +.++|++++++|+++.+.|++..+..+.|..|...++ ..
T Consensus 65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~---------~~ 135 (802)
T 4hg6_A 65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRP---------LQ 135 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC---------CC
T ss_pred hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCC---------CC
Confidence 455 45567777789999999987763 2467888999999999999999999999998876432 13
Q ss_pred CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCChhhHHHhhhhHHHhhhCCCCchhhhhhhh
Q 045222 348 PSKLMPVDIFVSTVDPIKEPSLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARKWPRAPEWYFAQKI 427 (1049)
Q Consensus 348 ~~~lP~VDVfV~t~nP~kEpp~vv~~Tvls~lalDYP~~kl~vyV~DDG~s~~Tf~al~Ea~~fA~~Wpr~Pe~YF~~k~ 427 (1049)
++++|.|+|+||||| |++.++.+||.|+++++||.++++|+|+|||++|.|.+..
T Consensus 136 ~~~~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~---------------------- 190 (802)
T 4hg6_A 136 PEELPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSP---------------------- 190 (802)
T ss_dssp TTTCCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCS----------------------
T ss_pred ccCCCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccC----------------------
Confidence 467999999999999 9998999999999999999999999999999998664320
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCcEEEEeccCCCCCCCCChHHHHHHH
Q 045222 428 DYLKDKVLASFVRERRAMKREYEQFKVRINALVAKAQIIFLGPSVGLDTDGNELPRLVYVSREKRPGFNNHKKAGAMNAL 507 (1049)
Q Consensus 428 ~~lk~~~~~~fv~err~~kr~yee~kvRIn~l~~~a~kv~lg~~g~~d~~~~~lP~lvYvsRekrpg~~h~~KAGALN~~ 507 (1049)
.|+.+++.+ +.+++ ++.+.++ ..+.|+.|++ ++++|+||+|.+
T Consensus 191 -------d~~i~~~~~---~~~~~----l~~~~~~-------------------~~v~~i~~~~----~~~GKa~alN~g 233 (802)
T 4hg6_A 191 -------DPELAQKAQ---ERRRE----LQQLCRE-------------------LGVVYSTRER----NEHAKAGNMSAA 233 (802)
T ss_dssp -------SHHHHHHHH---HHHHH----HHHHHHH-------------------HTCEEEECSS----CCSHHHHHHHHH
T ss_pred -------CHHHHHHHH---hhhHH----HHHHHHh-------------------cCcEEEEecC----CCCcchHHHHHH
Confidence 011111111 01111 1111111 0268888877 578999999999
Q ss_pred HHhccCCCCCCEEEEecCCCCCChHHHHHHHHHhh-cCCCCCceeEEEecCccccCCCCc-------cccchhhhhhHhh
Q 045222 508 VRVSAVLTNSPYLLNLDCDHYINNSKALREAMCFM-MDPLLGKRVCYVQFPRRFDGINQD-------DRFANRKTVFFDI 579 (1049)
Q Consensus 508 lrvSav~tng~~Il~lDaD~~~~~p~~Lr~~m~ff-~Dp~~g~~v~~VQ~PQ~F~nid~~-------D~yan~~~vFfdi 579 (1049)
++ .++++||+++|||++ +.|++|++++.+| .|| ++++||+|+.+.|.++. .++.+++..||..
T Consensus 234 l~----~a~gd~Il~lDaD~~-~~pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (802)
T 4hg6_A 234 LE----RLKGELVVVFDADHV-PSRDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGK 304 (802)
T ss_dssp HH----HCCCSEEEECCTTEE-ECTTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHT
T ss_pred HH----hcCCCEEEEECCCCC-cChHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHH
Confidence 99 479999999999999 5899999999988 588 79999999999987642 4456778899999
Q ss_pred hccccccCCCcccccccchhhhhhhcCCCCCCCCCCCCCcCCCCCCCcCCCCcccCcccccccCCCchhhhhhhhcccCC
Q 045222 580 NMKGLDGIQGPINVGTGCVFRRQAFYGYDAPKTKKSPTRTSKCLPKWCCSGHCCSGRRRKKKINRPKSEIKKKFAMKDTA 659 (1049)
Q Consensus 580 ~~~glDg~qgp~yvGTgcvfRR~ALyg~~p~~~~~~~~~~~~~~~~~~~~~~~c~~~r~~~~~~~~~~~~~~~~~~~~~~ 659 (1049)
...+.+.+++++++|++++|||+++.
T Consensus 305 ~~~~~~~~~~~~~~G~~~~~Rr~al~------------------------------------------------------ 330 (802)
T 4hg6_A 305 IHRGLDRWGGAFFCGSAAVLRRRALD------------------------------------------------------ 330 (802)
T ss_dssp HHHHHHHTTCCCCCSSSEEEEHHHHH------------------------------------------------------
T ss_pred HHhhHhhcCCceecccchhhhHHHHH------------------------------------------------------
Confidence 99999999999999999999998872
Q ss_pred ccccccchhccccccccccchhhhhHHHHHhhCCcHHHHhhhhhhcCCCCCCcchhhHHHHHHHhhcccccccccccccc
Q 045222 660 PMCAWEGIEEGIEGAEGEKSDTLLHQELEKKFGQSPVFVASTLLEDGGTPKSASLASLLKEAIHVISCGYEVKTEWGKEV 739 (1049)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~s~l~e~GG~~~~~~~~~~~~eA~~v~sc~YE~~T~WG~ev 739 (1049)
++||+++
T Consensus 331 --------------------------------------------~vGgf~~----------------------------- 337 (802)
T 4hg6_A 331 --------------------------------------------EAGGFAG----------------------------- 337 (802)
T ss_dssp --------------------------------------------HHTTCCC-----------------------------
T ss_pred --------------------------------------------HcCCcCC-----------------------------
Confidence 3566554
Q ss_pred ccccccccchHHHHHHHHHCCcEEEEecCCCCccccCCCcCHHHHHhhhheecccchhhhhhccCccccccCCCCChhhh
Q 045222 740 GWIYGSVTKDMLTGLIMHCHGWRSIYCIPDRPAFKGPAPINLSVCLHWVLRWALGSVEVFLSRHCPVWYGYGGGLKWLER 819 (1049)
Q Consensus 740 GW~ygsvTEDi~Tg~rLh~rGWrSvY~~~~~~Af~GlaP~tl~~~l~QR~RWA~G~lQI~lsr~~Pl~~g~~~~Ltl~QR 819 (1049)
++++||.+++++|+.+||+++|+++... ++.+|+|+.++++||.||++|.+|+++ +++|++ .+++++.||
T Consensus 338 ----~~~~ED~~l~~rl~~~G~ri~~~~~~~~--~~~~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~---~~~l~~~~r 407 (802)
T 4hg6_A 338 ----ETITEDAETALEIHSRGWKSLYIDRAMI--AGLQPETFASFIQQRGRWATGMMQMLL-LKNPLF---RRGLGIAQR 407 (802)
T ss_dssp ----SSSSHHHHHHHHHHTTTCCEEECCCCCE--EECCCCSHHHHHHHHHHHHHHHHHHHH-HSCTTS---CSSCCHHHH
T ss_pred ----CCcchHHHHHHHHHHcCCeEEEecCCEE--EecCCCCHHHHHHHHHHHHccHHHHHH-HhCccc---cCCCCHHHH
Confidence 4788999999999999999999975554 899999999999999999999999998 457886 688999999
Q ss_pred HhHHhhhhhhhhHHHHHHHHHHHHHHHHhCCcchhhchHHHHHHHHHHHH-HHHHHhhhheeeccccccccccchhHHHh
Q 045222 820 LSYINACLYPFTSIPLLVYCALPAVCLLTGKFITPELTAVAGLYFMSLFM-CIFATSILEMRWSGVGIDEWWRNEQFWVI 898 (1049)
Q Consensus 820 L~Yl~s~ly~l~sl~~liylllP~l~LltG~~iip~~s~~~~~~fi~lfl-s~~~~~lLe~rwsGvsi~~wWr~e~~W~I 898 (1049)
+.|+...++|+.+++.++++++|+++++++..++......+..+++.+++ ...+...+. .+.. ..|| ++.++.+
T Consensus 408 l~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~~~~~~~~~---~~~r-~~~~-~~l~~~~ 482 (802)
T 4hg6_A 408 LCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNALF---ARQR-WPLV-SEVYEVA 482 (802)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHH---TTTS-CTTH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHHHHHHh---cCcH-HHHH-HHHHHHH
Confidence 99999999999999999999999999999998877543333322222222 222222221 1111 1233 3454433
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCeEeccCCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCcchh
Q 045222 899 GGISAHPVAVFQGLLKVLAGVDTDFTVTSKAGDVEAFSELYAFKWTTLLIPPTTLLIINLVGMVAGVSNAINNGHESWGL 978 (1049)
Q Consensus 899 ~~~sa~LfAv~~aLlkvl~g~~~~F~VT~K~~~~~~~~~ly~f~wt~l~iP~~tllilnlv~iv~gi~~~~~~~~~~w~~ 978 (1049)
.+.. .+.+++. ..+.+++.+|.||+|+...+.. +-+ .++.|++++++++++++++|+++...... +
T Consensus 483 ~~~~-~~~a~l~---~l~~~~~~~f~VT~Kg~~~~~~-----~~~-~~~~p~~~~~~l~~~~~~~~~~~~~~~~~----~ 548 (802)
T 4hg6_A 483 QAPY-LARAIVT---TLLRPRSARFAVTAKDETLSEN-----YIS-PIYRPLLFTFLLCLSGVLATLVRWVAFPG----D 548 (802)
T ss_dssp HHHH-HHHHHHH---HHHSTTCCCCCCCCCCCCCSSC-----CBC-TTCHHHHHHHHHHHHHHHHHHHHHHHCGG----G
T ss_pred HHHH-HHHHHHH---HHhCCCCCcceECCCCcccccc-----chh-hHHHHHHHHHHHHHHHHHHHHHHHhccCC----c
Confidence 2221 1223333 3345688999999998754332 113 57789999999999999999998876532 3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhc
Q 045222 979 LFGKLFFALWVIIHLFPFLKGLI 1001 (1049)
Q Consensus 979 l~g~l~~~~Wvi~~l~Pf~~gL~ 1001 (1049)
..+.+++++|+++|++...-++.
T Consensus 549 ~~~~~~~~~w~~~~l~~l~~~~~ 571 (802)
T 4hg6_A 549 RSVLLVVGGWAVLNVLLVGFALR 571 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhhhhHHHHHHHHHHHHHHH
Confidence 55678999999999999888873
|
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 | Back alignment and structure |
|---|
| >3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* | Back alignment and structure |
|---|
| >1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* | Back alignment and structure |
|---|
| >2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* | Back alignment and structure |
|---|
| >2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* | Back alignment and structure |
|---|
| >3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A | Back alignment and structure |
|---|
| >4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* | Back alignment and structure |
|---|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
| >2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... | Back alignment and structure |
|---|
| >3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* | Back alignment and structure |
|---|
| >2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* | Back alignment and structure |
|---|
| >2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* | Back alignment and structure |
|---|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B | Back alignment and structure |
|---|
| >2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* | Back alignment and structure |
|---|
| >1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* | Back alignment and structure |
|---|
| >2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* | Back alignment and structure |
|---|
| >2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
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| >2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} | Back alignment and structure |
|---|
| >3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
| >1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2 | Back alignment and structure |
|---|
| >1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3 | Back alignment and structure |
|---|
| >2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B | Back alignment and structure |
|---|
| >1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A | Back alignment and structure |
|---|
| >1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
| >2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C | Back alignment and structure |
|---|
| >2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1 | Back alignment and structure |
|---|
| >3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1049 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 1e-46 | |
| d1g25a_ | 65 | g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi | 1e-04 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 159 bits (404), Expect = 1e-46
Identities = 58/85 (68%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 25 ESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACNECAFPICRTCYEYERREGNQVCPQ 84
S +PL+ L GQ C ICGD +GL V+G D FVACNEC FP CR CYEYERREG Q CPQ
Sbjct: 5 SSGPKPLKNLDGQFCEICGDQIGLTVEG-DLFVACNECGFPACRPCYEYERREGTQNCPQ 63
Query: 85 CKTRFRRLKGSARVEGDEEEDDIDD 109
CKTR++RL+GS RVEGDE+E+DID
Sbjct: 64 CKTRYKRLRGSPRVEGDEDEEDIDS 88
|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1049 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 100.0 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.61 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 99.23 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 99.05 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 96.81 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 96.48 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 95.26 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 95.05 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 91.71 | |
| d1fo8a_ | 343 | N-acetylglucosaminyltransferase I {Rabbit (Oryctol | 86.0 | |
| d1rmda2 | 86 | V(D)J recombination activating protein 1 (RAG1), d | 83.91 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=5.2e-45 Score=321.71 Aligned_cols=86 Identities=67% Similarity=1.347 Sum_probs=82.2
Q ss_pred cCccCCCccCccCCcccCCcCCCCcCCCCCCCceeccCCCCCccchhhHHHHHhhcCCCCCCCccccccccCCcccCCCC
Q 045222 23 DRESAARPLQQLGGQKCHICGDDVGLPVDGGDPFVACNECAFPICRTCYEYERREGNQVCPQCKTRFRRLKGSARVEGDE 102 (1049)
Q Consensus 23 ~~~~~~~~~~~~~~~~CqiCgd~vg~~~~~G~~FvaC~eC~FpvCRpCYeyerkeg~q~CPqCkt~Ykr~kgsprv~gd~ 102 (1049)
+++.++||++++++|+||||||+||+++| ||+|||||||+|||||||||||||||+|+|||||||||||||||||+||+
T Consensus 3 ~g~~g~kp~~~~~~q~CqiCGd~VG~~~~-Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe 81 (93)
T d1weoa_ 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVE-GDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDE 81 (93)
T ss_dssp CSSSSSSCCSCCSSCBCSSSCCBCCBCSS-SSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSC
T ss_pred CCCCCCCChhhcccchhhhcccccccCCC-CCEEEEecccCCccchHHHHHHHhccCccCcccCChhhhhcCCCCCCCCc
Confidence 44566899999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred ccccchh
Q 045222 103 EEDDIDD 109 (1049)
Q Consensus 103 ~~~~~~d 109 (1049)
+||++||
T Consensus 82 ~e~~~d~ 88 (93)
T d1weoa_ 82 DEEDIDS 88 (93)
T ss_dssp CCCCSCC
T ss_pred ccccccc
Confidence 9988875
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
|---|
| >d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|