Citrus Sinensis ID: 045278

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MENLMGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPLQQSPSDHSISNGYHSEENSPTIPQQQLQYNNSVSYPGNPTGQNTFTY
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEEccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEcccccccccccHcEccccccEEEEEccccccccccccccccccccEEEEccccccEcccccEEEEEEEEEEEEcccccccccccEEEEEEEccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
menlmgykfqpsnEQILYLLVEKrlnphfshhpikdivdicglepwdlatestpesedqVWYFFcepcykyreshrahrrtkaghwkitskdsqikarngptgtkKFLTFYrhglprkeaitewgmheyhvkddssykKEFILCCITRKrnkkkkrgisatdegessqqlvsplqqspsdhsisngyhseensptipqqqlqynnsvsypgnptgqntfty
Flexible Loop (DISEMBL)
menlmgykfqpsNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATestpesedqVWYFFCEPCYKYREshrahrrtkaghwkitskdsqikarngptgtkKFLTFYRHGLPRKEAITEWGMHeyhvkddssykkEFILCCitrkrnkkkkrgisatdegessqqlvsplqQSPSDHSISNGYHSEENSPTIPQQQLQynnsvsypgnptgqntfty
Low Complexity Region (SEG)
MENLMGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGEssqqlvsplqqspsDHSISNGYHSEENSPTIPQQQLQYNNSVSYPGNPTGQNTFTY
Disordered region (IsUnstruct)
************NEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATES****EDQVWYFFCEPCYKYRESHRAH**TKAGHWKI**************GTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITR*************************************************************************
Disordered Region (DISOPRED)
MENLMGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITR*************************************************************************
Disordered Region (DISEMBL)
MENLMGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRE***************TSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRK**********************************************IPQQQLQYNNSVSYPGNPTGQNTFTY
Disordered Region (DISPRO)
*ENLMGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRN**********************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MENLMGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPLQQSPSDHSISNGYHSEENSPTIPQQQLQYNNSVSYPGNPTGQNTFTY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
O81914	362	NAC domain-containing pro	no	no	0.850	0.519	0.301	2e-19
O81913	359	NAC domain-containing pro	no	no	0.742	0.456	0.331	4e-19
Q84K00	567	NAC domain-containing pro	no	no	0.678	0.264	0.354	6e-19
Q7GCL7	489	NAC domain-containing pro	no	no	0.656	0.296	0.337	2e-17
Q9FLJ2	336	NAC domain-containing pro	no	no	0.683	0.449	0.349	3e-17
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.638	0.462	0.339	5e-17
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.769	0.498	0.316	5e-17
Q9FWX2	395	NAC domain-containing pro	no	no	0.674	0.377	0.339	9e-17
Q94F58	340	NAC domain-containing pro	no	no	0.669	0.435	0.374	1e-16
Q9M126	457	NAC domain-containing pro	no	no	0.769	0.371	0.312	1e-16

>sp|O81914|NAC5_ARATH NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 11/199 (5%)

Query: 1   MENLMGYKFQPSNEQILYL-LVEKRLNPHFSH-HPIKDIVDICGLEPWDLATESTPESED 58
           M N +G++F+P++ +I+ + L  K L  + SH   +   VDIC  +PWDL + S  ++ D
Sbjct: 1   MANPVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRD 60

Query: 59  QVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGP---TGTKKFLTFYRHGL 115
           QVWYFF     KY +  R  R+TK+G WK T     I  + G     G K+ L F  HG 
Sbjct: 61  QVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGG 120

Query: 116 PRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPLQ 175
            +    ++W MHEYH    S  +      C  + + ++++  ++     + +  L+ P  
Sbjct: 121 SK----SDWAMHEYHATFSSPNQIMTYTLCKVKFKGERREFSVATGSGIKHTHSLIPPTN 176

Query: 176 QSPSDHSISNG--YHSEEN 192
            S      + G  +HS+E+
Sbjct: 177 NSGVLSVETEGSLFHSQES 195

Arabidopsis thaliana (taxid: 3702)

>sp|O81913|NAC4_ARATH NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 11/175 (6%)

Query: 1   MENLMGYKFQPSNEQIL-YLLVEKRLNPHFSH-HPIKDIVDICGLEPWDLATESTPESED 58
           M N +G++F+P++E+I+ + L  K L+   SH   +   VDIC  EPWDL ++S  +S D
Sbjct: 1   MMNPVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRD 60

Query: 59  QVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNG---PTGTKKFLTFYRHGL 115
            VWYFF     KY    +  RRT +G WK T K   +  + G     G K+ L F     
Sbjct: 61  GVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKN--- 117

Query: 116 PRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQL 170
            R  + T+W MHEYH    S +  + +   + +   K ++  IS++  G   +Q+
Sbjct: 118 -RDGSKTDWVMHEYHAT--SLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQI 169

Arabidopsis thaliana (taxid: 3702)

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 94.4 bits (233), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 82/158 (51%), Gaps = 8/158 (5%)

Query: 6   GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++E+++ Y L  K  N  F    I  + DI   EPWDL  +S  +S D  WYFF
Sbjct: 12  GFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEWYFF 70

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                KY    + +R T+ G+WK T KD +I+  +   G KK L +++   PR E  T W
Sbjct: 71  SMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGER-TNW 129

Query: 125 GMHEYHVKDDSSYK-----KEFILCCITRKRNKKKKRG 157
            MHEY + D+   K     + ++LC I +K     K G
Sbjct: 130 VMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNG 167

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 78/151 (51%), Gaps = 6/151 (3%)

Query: 6   GYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFC 65
           G+ F P + +++   ++K+++     + I   VDI   EPWDL  +    ++D  W+FF 
Sbjct: 12  GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFA 71

Query: 66  EPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWG 125
               KY    R++R T AG+WK T KD  IK      GTKK L F+  G P     TEW 
Sbjct: 72  ARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFH-EGRPPTGRRTEWI 130

Query: 126 MHEYHVKDDS-----SYKKEFILCCITRKRN 151
           MHEY++ +         K  ++LC IT++ +
Sbjct: 131 MHEYYIDERECQACPDMKDAYVLCRITKRND 161

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 88.6 bits (218), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 88/163 (53%), Gaps = 12/163 (7%)

Query: 6   GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++E+++ + L +K L+  FS   I + VD+   EPW+L   +  +  ++ WYFF
Sbjct: 19  GFRFHPTDEELITHYLHKKVLDTSFSAKAIGE-VDLNKSEPWELPWMA--KMGEKEWYFF 75

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
           C    KY    R +R T+AG+WK T KD +I       G KK L FYR   P+ +  T W
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRGRAPKGQK-TNW 134

Query: 125 GMHEYHVKDDSS-------YKKEFILCCITRKRNKKKKRGISA 160
            MHEY ++   S        K E+++C + +K    KK  IS+
Sbjct: 135 VMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPISS 177

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 12/153 (7%)

Query: 6   GYKFQPSNEQILYLLVEKRLN-PHFSHHPIKDIVDICGLEPWDLATE----STPESEDQV 60
           G++F P++E++L+  ++K+++   F    IK+ VD+  +EPWDL       STP++E   
Sbjct: 11  GFRFHPTDEELLHYYLKKKISYEKFEMEVIKE-VDLNKIEPWDLQDRCKIGSTPQNE--- 66

Query: 61  WYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEA 120
           WYFF     KY    R +R T +G WK T +D  I+      G +K L FY+   P  + 
Sbjct: 67  WYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK 126

Query: 121 ITEWGMHEYHVKD--DSSYKKEFILCCITRKRN 151
            T+W MHEY ++D  D   +  +++C + +K+N
Sbjct: 127 -TDWIMHEYRIEDTEDDPCEDGWVVCRVFKKKN 158

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 23/193 (11%)

Query: 6   GYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATE----STPESEDQVW 61
           G++F P++E++L+  ++K+++       +   VD+  LEPWDL       STP++E   W
Sbjct: 12  GFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNE---W 68

Query: 62  YFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAI 121
           YFF     KY    R +R T AG WK T +D  I+      G +K L FY+   P  +  
Sbjct: 69  YFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK- 127

Query: 122 TEWGMHEYHVKDDSSYKKE-----FILCCITRKRNKKKKRGISATDEGESSQQLVSPLQQ 176
           T+W MHEY ++D    +       +++C +  K+N  K       +EG SS   ++ L Q
Sbjct: 128 TDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKNLFK-----VVNEGSSS---INSLDQ 179

Query: 177 SPSDHSISNGYHS 189
              +H  SN  H+
Sbjct: 180 --HNHDASNNNHA 190

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score = 87.0 bits (214), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 7/156 (4%)

Query: 6   GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQV-WYF 63
           G++F P++E+++ Y L +K  +       IKDI D+  +EPWDL        E+Q  WYF
Sbjct: 10  GFRFHPTDEELVDYYLRKKVASKRIEIDFIKDI-DLYKIEPWDLQELCKIGHEEQSDWYF 68

Query: 64  FCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITE 123
           F     KY    R +R TKAG WK T +D  I  R+   G +K L FY+   P  +  ++
Sbjct: 69  FSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQK-SD 127

Query: 124 WGMHEYHVKDDSS---YKKEFILCCITRKRNKKKKR 156
           W MHEY ++ D +    ++ +++C + +KR    +R
Sbjct: 128 WIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVRR 163

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94F58|NAC89_ARATH NAC domain-containing protein 89 OS=Arabidopsis thaliana GN=NAC089 PE=1 SV=1

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 81/155 (52%), Gaps = 7/155 (4%)

Query: 6   GYKFQPSN-EQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G+KF P++ E I Y L  K      S   I D+ +I   EPWDL  +S  +S D  W+FF
Sbjct: 24  GFKFSPTDVELISYYLKRKMDGLERSVEVIPDL-EIYNFEPWDLPDKSIVKS-DSEWFFF 81

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
           C    KY    +  R TK G+WK T K+  +K+ +   GTK+ L F+    P+ E  T+W
Sbjct: 82  CARGKKYPHGSQNRRATKMGYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGER-TDW 140

Query: 125 GMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGIS 159
            MHEY VK   S     ++C +  +RNK+   G S
Sbjct: 141 IMHEYCVK-GVSLDDAMVVCRV--RRNKEYNSGTS 172

Transcription factor involved in plant cell division.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M126|NAC69_ARATH NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 88/176 (50%), Gaps = 6/176 (3%)

Query: 1   MENLMGYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
           +++L+GY+F P+ E+++ + L  K L   +        ++IC  +P  L + S  +S+D 
Sbjct: 2   VKDLVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDP 61

Query: 60  VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKAR---NGPTGTKKFLTFYRHGLP 116
           VWYFFC   Y   +     R T +G+WK T  D +IK +    G  G KK L +Y   +P
Sbjct: 62  VWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVP 121

Query: 117 RKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVS 172
            K   T W MHEYH+      ++ +++C +  K  +         +  E SQ LVS
Sbjct: 122 -KGVWTPWVMHEYHITCLPQDQRNYVICQVMYK-GEDGDVPSGGNNSSEPSQSLVS 175

Transcription activator activated by proteolytic cleavage through regulated intramembrane proteolysis mediated by calpain or its functional homolog. Regulates cytokinin signaling during cell division.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
356560207	1061	PREDICTED: uncharacterized protein LOC10	0.769	0.160	0.389	6e-25
356522462	497	PREDICTED: NAC domain-containing protein	0.751	0.334	0.393	4e-24
302399031	850	NAC domain class transcription factor [M	0.809	0.210	0.346	3e-22
296089037	335	unnamed protein product [Vitis vinifera]	0.665	0.438	0.390	4e-22
225453680	560	PREDICTED: uncharacterized protein LOC10	0.665	0.262	0.390	5e-22
356560211	431	PREDICTED: NAC domain-containing protein	0.832	0.426	0.345	1e-21
21358787	585	nam-like protein 1 [Petunia x hybrida]	0.855	0.323	0.320	2e-21
334187196	533	NAC transcription factor-like 9 [Arabido	0.891	0.369	0.298	3e-21
42567421	512	NAC transcription factor-like 9 [Arabido	0.891	0.384	0.298	3e-21
186516558	534	NAC transcription factor-like 9 [Arabido	0.891	0.368	0.298	3e-21

>gi|356560207|ref|XP_003548385.1| PREDICTED: uncharacterized protein LOC100778755 [Glycine max]

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 15/185 (8%)

Query: 1   MENLM--------GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATE 51
           MEN++        G++F+P++E+++ Y L  K L   F  H I +I D+C +EPWD+   
Sbjct: 1   MENIISICDHMPVGFRFRPTDEELVDYYLKHKLLADDFPVHIIPEI-DLCKVEPWDVPGR 59

Query: 52  STPESEDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIK--ARNGPTGTKKFLT 109
           S  +S+D  W+FF    YKY +S R +R TK G WK T  D +I+    +   GTKK L 
Sbjct: 60  SVIKSDDPEWFFFSPVDYKYLKSKRFNRTTKRGFWKATGNDRKIRIPGTSNVIGTKKTLV 119

Query: 110 FYRHGLPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISAT--DEGESS 167
           F++  +PR  A T W +HEYH       ++ F+LC + +K  KK + GI A   DEGE S
Sbjct: 120 FHQGRVPRG-AKTNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPSFDEGEPS 178

Query: 168 QQLVS 172
             +VS
Sbjct: 179 IHMVS 183

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522462|ref|XP_003529865.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score =  117 bits (292), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/173 (39%), Positives = 97/173 (56%), Gaps = 7/173 (4%)

Query: 5   MGYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYF 63
           +G++F+P++E+++ Y L  K L   F  H I +I D+C +EPWD+   S  +S+D  W+F
Sbjct: 14  VGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEI-DLCKVEPWDVPERSVIKSDDPEWFF 72

Query: 64  FCEPCYKYRESHRAHRRTKAGHWKITSKDSQIK--ARNGPTGTKKFLTFYRHGLPRKEAI 121
           F    YKY +S R +R TK G+WK T  D  +K    +   GTKK L F+    PR    
Sbjct: 73  FSPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTSNVIGTKKTLVFHEGRGPRG-VK 131

Query: 122 TEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISAT--DEGESSQQLVS 172
           T W +HEYH       ++ F+LC + +K  KK + GI A   DEGE S  L S
Sbjct: 132 TNWVIHEYHAVTSHESQRAFVLCRLMKKAEKKNEGGIEAPTFDEGEPSVHLFS 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302399031|gb|ADL36810.1| NAC domain class transcription factor [Malus x domestica]

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 103/196 (52%), Gaps = 17/196 (8%)

Query: 1   MENL-MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
           ME+L +G++F+P++E+++   +  ++N   S   +   +D+C  EPWDL   S  +S+DQ
Sbjct: 6   MESLPLGFRFRPTDEELINHYLRLKINGRDSEVRVIPEIDVCRWEPWDLPKLSVIKSDDQ 65

Query: 60  VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKAR--------NGPTGTKKFLTFY 111
            W+FFC    KY   HR++R T AG+WK T KD  IK+R        NG  G KK L FY
Sbjct: 66  EWFFFCPRDRKYPNGHRSNRATDAGYWKATGKDRTIKSRQCKSASNSNGQVGMKKTLVFY 125

Query: 112 RHGLPRKEAITEWGMHEY-----HVKDDSSYKKEFILCCITRKRNKKKKRGISATDEGES 166
           R   P+ E  T W MHEY      +      +  F+LC +  K   ++K  +   DE E 
Sbjct: 126 RGRAPKGER-TSWIMHEYRATQKELDGTGPGQGAFVLCRLFHK--PEEKADVPKYDEVEQ 182

Query: 167 SQQLVSPLQQSPSDHS 182
           +    +  + SP + S
Sbjct: 183 TGLSPTTTKSSPDESS 198

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089037|emb|CBI38740.3| unnamed protein product [Vitis vinifera]

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 4/151 (2%)

Query: 5   MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           +G++F P++E+++   ++ ++    SH  I   VD+C  EPWDL   S  ++ D  W+FF
Sbjct: 8   VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 67

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGP--TGTKKFLTFYRHGLPRKEAIT 122
           C P YKY    R++R T+AG+WK T KD  IK+R      GTKK L FYR   P +   T
Sbjct: 68  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYRGRAP-QSVRT 126

Query: 123 EWGMHEYHVKDDS-SYKKEFILCCITRKRNK 152
            W MHEY     S    K ++LC + RK ++
Sbjct: 127 NWVMHEYRAAIASLPANKAYVLCRLKRKTDE 157

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453680|ref|XP_002268892.1| PREDICTED: uncharacterized protein LOC100252386 [Vitis vinifera]

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 4/151 (2%)

Query: 5   MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           +G++F P++E+++   ++ ++    SH  I   VD+C  EPWDL   S  ++ D  W+FF
Sbjct: 16  VGFRFHPTDEELVDHYLKLKILGMNSHVDIIPEVDVCKWEPWDLPVLSVIQTNDPEWFFF 75

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGP--TGTKKFLTFYRHGLPRKEAIT 122
           C P YKY    R++R T+AG+WK T KD  IK+R      GTKK L FYR   P +   T
Sbjct: 76  CPPDYKYPTGRRSNRATEAGYWKPTGKDRNIKSRATKELLGTKKTLVFYRGRAP-QSVRT 134

Query: 123 EWGMHEYHVKDDS-SYKKEFILCCITRKRNK 152
            W MHEY     S    K ++LC + RK ++
Sbjct: 135 NWVMHEYRAAIASLPANKAYVLCRLKRKTDE 165

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560211|ref|XP_003548387.1| PREDICTED: NAC domain-containing protein 69-like [Glycine max]

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 103/194 (53%), Gaps = 10/194 (5%)

Query: 1   MENLMGYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDL---ATESTPES 56
           M++++GY F+P++E+++ + L  K L+     H I D VD+C +EPWDL     +S    
Sbjct: 1   MDDIVGYGFRPTDEELVKFYLKHKLLDDDPCVHFILD-VDLCEVEPWDLPLLLADSAVRF 59

Query: 57  EDQVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKAR--NGPTGTKKFLTFYRHG 114
             + W+FF    YKY  S R +R TK G WK T KD  I+++  N   GTKK L +Y+ G
Sbjct: 60  NGREWFFFSPVDYKYSNSKRVNRTTKCGFWKPTGKDRGIRSKDTNNVIGTKKTLVYYQ-G 118

Query: 115 LPRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISA--TDEGESSQQLVS 172
                  + W +HEYH       ++ F+LC + +K  K  + G  A   DEG  S+ +VS
Sbjct: 119 RVSSGVKSNWVIHEYHAVTFHESQRTFVLCRLMKKPGKTTEGGTDALICDEGGPSRSMVS 178

Query: 173 PLQQSPSDHSISNG 186
             +   +   I +G
Sbjct: 179 DYENQATTQGIPSG 192

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21358787|gb|AAM47025.1| nam-like protein 1 [Petunia x hybrida]

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 104/203 (51%), Gaps = 14/203 (6%)

Query: 5   MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           +GY+F+P++E+++   +  ++N   +   +   VDIC LEPWDL   S  ES D  W+FF
Sbjct: 29  VGYRFRPTDEELVNHYLRLKINGADNEVSVIREVDICKLEPWDLPIWSVVESNDNEWFFF 88

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGP-TGTKKFLTFYRHGLPRKEAITE 123
           C    KY+   R +R T+ G+WK T KD  I  + G   G KK L +Y    P  +  T 
Sbjct: 89  CPKDRKYQNGQRLNRATERGYWKATGKDRNIVTKKGAKIGMKKTLVYYIGRAPEGKR-TH 147

Query: 124 WGMHEYHVKDDS-----SYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPLQQSP 178
           W +HEY   D S       +  F+LC + RK + K+   + +++  ++ Q   +   +SP
Sbjct: 148 WVIHEYRATDKSLDGTHPGQGAFLLCRLFRKNDLKQDEHVESSNLDDAEQNATAA--KSP 205

Query: 179 SDHSISNGYHSEENSPTIPQQQL 201
           +D  +     SE  +P +  Q L
Sbjct: 206 TDDEL-----SEAATPLVAGQPL 223

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334187196|ref|NP_001190927.1| NAC transcription factor-like 9 [Arabidopsis thaliana] gi|332661135|gb|AEE86535.1| NAC transcription factor-like 9 [Arabidopsis thaliana]

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 24/221 (10%)

Query: 1   MENL-MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
           ME+L +G++F+P++E+++   +  ++N   S   +   +D+C  EPWDL   S  +++D 
Sbjct: 6   MESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVIKTDDP 65

Query: 60  VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKE 119
            W+FFC    KY   HR++R T +G+WK T KD  IK++    G KK L FYR   P+ E
Sbjct: 66  EWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGRAPKGE 125

Query: 120 AITEWGMHEYH--VKD---DSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPL 174
             T W MHEY   +KD    S  +  ++LC +  K + +                 V+ +
Sbjct: 126 R-TNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDR-----------------VNGV 167

Query: 175 QQSPSDHSISNGYHSEENSPTIPQQQLQYNNSVSYPGNPTG 215
           +   +  + SN Y  ++ S  + Q+    + +V  P + +G
Sbjct: 168 KSDEAAFTASNKYSPDDTSSDLVQETPSSDAAVEKPSDYSG 208

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567421|ref|NP_567986.3| NAC transcription factor-like 9 [Arabidopsis thaliana] gi|332661133|gb|AEE86533.1| NAC transcription factor-like 9 [Arabidopsis thaliana]

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 24/221 (10%)

Query: 1   MENL-MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
           ME+L +G++F+P++E+++   +  ++N   S   +   +D+C  EPWDL   S  +++D 
Sbjct: 6   MESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVIKTDDP 65

Query: 60  VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKE 119
            W+FFC    KY   HR++R T +G+WK T KD  IK++    G KK L FYR   P+ E
Sbjct: 66  EWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGRAPKGE 125

Query: 120 AITEWGMHEYH--VKD---DSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPL 174
             T W MHEY   +KD    S  +  ++LC +  K + +                 V+ +
Sbjct: 126 R-TNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDR-----------------VNGV 167

Query: 175 QQSPSDHSISNGYHSEENSPTIPQQQLQYNNSVSYPGNPTG 215
           +   +  + SN Y  ++ S  + Q+    + +V  P + +G
Sbjct: 168 KSDEAAFTASNKYSPDDTSSDLVQETPSSDAAVEKPSDYSG 208

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186516558|ref|NP_001119122.1| NAC transcription factor-like 9 [Arabidopsis thaliana] gi|3367576|emb|CAA20028.1| NAM / CUC2 -like protein [Arabidopsis thaliana] gi|7270509|emb|CAB80274.1| NAM / CUC2-like protein [Arabidopsis thaliana] gi|332661134|gb|AEE86534.1| NAC transcription factor-like 9 [Arabidopsis thaliana]

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 24/221 (10%)

Query: 1   MENL-MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
           ME+L +G++F+P++E+++   +  ++N   S   +   +D+C  EPWDL   S  +++D 
Sbjct: 6   MESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVIKTDDP 65

Query: 60  VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKE 119
            W+FFC    KY   HR++R T +G+WK T KD  IK++    G KK L FYR   P+ E
Sbjct: 66  EWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGRAPKGE 125

Query: 120 AITEWGMHEYH--VKD---DSSYKKEFILCCITRKRNKKKKRGISATDEGESSQQLVSPL 174
             T W MHEY   +KD    S  +  ++LC +  K + +                 V+ +
Sbjct: 126 R-TNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDR-----------------VNGV 167

Query: 175 QQSPSDHSISNGYHSEENSPTIPQQQLQYNNSVSYPGNPTG 215
           +   +  + SN Y  ++ S  + Q+    + +V  P + +G
Sbjct: 168 KSDEAAFTASNKYSPDDTSSDLVQETPSSDAAVEKPSDYSG 208

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
TAIR|locus:2128013	534	NTL9 "NAC transcription factor	0.723	0.299	0.360	2e-23
TAIR|locus:2037920	652	NAC014 "NAC 014" [Arabidopsis	0.669	0.226	0.367	3.3e-22
TAIR|locus:2204783	359	NAC004 "NAC domain containing	0.837	0.515	0.314	8e-21
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.678	0.498	0.333	1.3e-20
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.678	0.273	0.360	1.9e-20
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.678	0.264	0.354	2.7e-20
TAIR|locus:2196641	305	NAC015 "NAC domain containing	0.638	0.462	0.339	2.7e-20
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.891	0.623	0.311	3.5e-20
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.665	0.503	0.316	3.5e-20
TAIR|locus:2095007	314	NAC058 "NAC domain containing	0.886	0.624	0.302	4.4e-20

TAIR|locus:2128013 NTL9 "NAC transcription factor-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 2.0e-23, P = 2.0e-23
 Identities = 61/169 (36%), Positives = 97/169 (57%)

Query:     1 MENL-MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
             ME+L +G++F+P++E+++   +  ++N   S   +   +D+C  EPWDL   S  +++D 
Sbjct:     6 MESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVIKTDDP 65

Query:    60 VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKE 119
              W+FFC    KY   HR++R T +G+WK T KD  IK++    G KK L FYR   P+ E
Sbjct:    66 EWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGRAPKGE 125

Query:   120 AITEWGMHEYH--VKD-D--SSYKKEFILCCITRKRNKKKKRGISATDE 163
               T W MHEY   +KD D  S  +  ++LC +  K + +   G+ + DE
Sbjct:   126 R-TNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVN-GVKS-DE 171

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005516 "calmodulin binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0031347 "regulation of defense response" evidence=IMP

GO:0000956 "nuclear-transcribed mRNA catabolic process" evidence=RCA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0008284 "positive regulation of cell proliferation" evidence=RCA

TAIR|locus:2037920 NAC014 "NAC 014" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 57/155 (36%), Positives = 86/155 (55%)

Query:     1 MENL-MGYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQ 59
             ME L +G++F+P++E+++   +  ++N       +   +D+C  EPWDL   S  +++DQ
Sbjct:    21 MEALPLGFRFRPTDEELINHYLRLKINGRDLEVRVIPEIDVCKWEPWDLPGLSVIKTDDQ 80

Query:    60 VWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKE 119
              W+FFC    KY   HR++R T  G+WK T KD  IK++    G KK L FYR   PR E
Sbjct:    81 EWFFFCPRDRKYPSGHRSNRATDIGYWKATGKDRTIKSKKMIIGMKKTLVFYRGRAPRGE 140

Query:   120 AITEWGMHEYHVKD---DSSY--KKEFILCCITRK 149
               T W MHEY   D   D +   +  ++LC +  K
Sbjct:   141 R-TNWIMHEYRATDKELDGTGPGQNPYVLCRLFHK 174

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0010050 "vegetative phase change" evidence=RCA

TAIR|locus:2204783 NAC004 "NAC domain containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
 Identities = 62/197 (31%), Positives = 95/197 (48%)

Query:     1 MENLMGYKFQPSNEQIL-YLLVEKRLNPHFSH-HPIKDIVDICGLEPWDLATESTPESED 58
             M N +G++F+P++E+I+ + L  K L+   SH   +   VDIC  EPWDL ++S  +S D
Sbjct:     1 MMNPVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRD 60

Query:    59 QVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNG---PTGTKKFLTFYRHGL 115
              VWYFF     KY    +  RRT +G WK T K   +  + G     G K+ L F     
Sbjct:    61 GVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKN--- 117

Query:   116 PRKEAITEWGMHEYHVKDDSSYKKEFILCCITRKRNKKKKRGISATDEG-EXXXXXXXXX 174
              R  + T+W MHEYH    S +  + +   + +   K ++  IS++  G E         
Sbjct:   118 -RDGSKTDWVMHEYHAT--SLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQIHSLIP 174

Query:   175 XXXXXDHSISNGYHSEE 191
                    S  + +HS+E
Sbjct:   175 LVNSSGGSEGSSFHSQE 191

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 51/153 (33%), Positives = 80/153 (52%)

Query:     6 GYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFC 65
             G++F P++E+++   +++++N       I   VD+   EPWDL  +S     D  WYF+ 
Sbjct:     9 GFRFHPTDEELVAYYLDRKVNGQAIELEIIPEVDLYKCEPWDLPEKSFLPGNDMEWYFYS 68

Query:    66 EPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWG 125
                 KY    R +R T+AG+WK T KD  ++++    G KK L +YR   P     T W 
Sbjct:    69 TRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMKMGMKKTLVYYRGRAPHGLR-TNWV 127

Query:   126 MHEYHVKD--DSSYKKEFILCCITRKRNKKKKR 156
             MHEY +     SS K+ + LC + +K  +  KR
Sbjct:   128 MHEYRLTHAPSSSLKESYALCRVFKKNIQIPKR 160

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 1.9e-20, P = 1.9e-20
 Identities = 57/158 (36%), Positives = 83/158 (52%)

Query:     6 GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
             G++F P++E+++ Y L  K  N  F    I  + D+   EPWDL  +S  +S D  WYFF
Sbjct:    12 GFRFHPTDEELVRYYLKRKICNKPFKFDAIS-VTDVYKSEPWDLPDKSRLKSRDLEWYFF 70

Query:    65 CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                  KYR   + +R T+ G+WK T KD +I   +   G KK L +++   PR E  T W
Sbjct:    71 SMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKGRAPRGER-TNW 129

Query:   125 GMHEYHVKD---DSS--YKKEFILCCITRKRNKKKKRG 157
              MHEY + D   D +  ++  F+LC I +K     K G
Sbjct:   130 VMHEYRLVDQDLDKTGVHQDAFVLCRIFQKSGSGPKNG 167

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 56/158 (35%), Positives = 82/158 (51%)

Query:     6 GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
             G++F P++E+++ Y L  K  N  F    I  + DI   EPWDL  +S  +S D  WYFF
Sbjct:    12 GFRFHPTDEELVRYYLKRKVCNKPFKFDAIS-VTDIYKSEPWDLPDKSKLKSRDLEWYFF 70

Query:    65 CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                  KY    + +R T+ G+WK T KD +I+  +   G KK L +++   PR E  T W
Sbjct:    71 SMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGER-TNW 129

Query:   125 GMHEYHVKDDSSYK-----KEFILCCITRKRNKKKKRG 157
              MHEY + D+   K     + ++LC I +K     K G
Sbjct:   130 VMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNG 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2196641 NAC015 "NAC domain containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 52/153 (33%), Positives = 86/153 (56%)

Query:     6 GYKFQPSNEQILYLLVEKRLN-PHFSHHPIKDIVDICGLEPWDLATE----STPESEDQV 60
             G++F P++E++L+  ++K+++   F    IK+ VD+  +EPWDL       STP++E   
Sbjct:    11 GFRFHPTDEELLHYYLKKKISYEKFEMEVIKE-VDLNKIEPWDLQDRCKIGSTPQNE--- 66

Query:    61 WYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEA 120
             WYFF     KY    R +R T +G WK T +D  I+      G +K L FY+   P  + 
Sbjct:    67 WYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK 126

Query:   121 ITEWGMHEYHVKD--DSSYKKEFILCCITRKRN 151
              T+W MHEY ++D  D   +  +++C + +K+N
Sbjct:   127 -TDWIMHEYRIEDTEDDPCEDGWVVCRVFKKKN 158

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 66/212 (31%), Positives = 101/212 (47%)

Query:     6 GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
             G++F P++E+++ Y LV K  + +F+   I D VD+   EPW+L  ++    ++  WYFF
Sbjct:    19 GFRFHPTDEELISYYLVNKIADQNFTGKAIAD-VDLNKSEPWELPEKAKMGGKE--WYFF 75

Query:    65 CEPCYKYRESHRAHRRTKAGHWKITSKDSQI--KARNGPTGTKKFLTFYRHGLPRKEAIT 122
                  KY    R +R T  G+WK T KD +I     +   G KK L FYR   PR E  T
Sbjct:    76 SLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEK-T 134

Query:   123 EWGMHEYHVKDDSSYKK----EFILCCITRKRNKKKKRGISATDEGEXXXXXXXXXXXXX 178
              W MHEY +   SSY+     E+++C + +K    KK  IS +                 
Sbjct:   135 CWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKY-ISTSSSSTSHHHNNHTRASIL 193

Query:   179 XDHSISNGYHSE--ENSPTI-PQQQLQYNNSV 207
               ++ +  Y S+  +  P + P   L  N S+
Sbjct:   194 STNNNNPNYSSDLLQLPPHLQPHPSLNINQSL 225

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 49/155 (31%), Positives = 82/155 (52%)

Query:     6 GYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFC 65
             G++F P++E+++   +++++        +  ++D+   +PW+L  +S   + D  WYFFC
Sbjct:     9 GFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWYFFC 68

Query:    66 EPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPT-GTKKFLTFYRHGLPRKEAITEW 124
                 KY    R +R TKAG+WK T KD +I +R+    G +K L FY+   P  +  + W
Sbjct:    69 SRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAPLGDR-SNW 127

Query:   125 GMHEYHVKDDSS------YKKEFILCCITRKRNKK 153
              MHEY + DD +       K  F+LC +  K   K
Sbjct:   128 IMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2095007 NAC058 "NAC domain containing protein 58" [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 65/215 (30%), Positives = 102/215 (47%)

Query:     2 ENLM-GYKFQPSNEQIL-YLLVEKRLNPHFSHHPIKDIVDICGLEPWDL-ATESTPESED 58
             ENL  G++F P++E+++ + L  K  +  F+   + D VD+   EPWDL A  S  E E 
Sbjct:     3 ENLPPGFRFHPTDEELITHYLCRKVSDIGFTGKAVVD-VDLNKCEPWDLPAKASMGEKE- 60

Query:    59 QVWYFFCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRK 118
               WYFF +   KY    R +R T+AG+WK T KD +I       G KK L FY+   P+ 
Sbjct:    61 --WYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRSGVLVGMKKTLVFYKGRAPKG 118

Query:   119 EAITEWGMHEYHVKDDSSY----KKEFILCCITRKRNKKKKRGISATDEGEXXXXXXXXX 174
             E  + W MHEY ++    +    K+E+++C +  K    KK       E +         
Sbjct:   119 EK-SNWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKK-----AQEQQPQSSQPSFG 172

Query:   175 XXXXXDHSISNGYHSEENSPTIPQQQ--LQYNNSV 207
                  + S++N +   +  P +      + YNN +
Sbjct:   173 SPCDANSSMANEFEDIDELPNLNSNSSTIDYNNHI 207

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	NTL9	NTL9 (NAC transcription factor-like 9); transcription factor; NAC transcription factor-like 9 (NTL9); FUNCTIONS IN- transcription factor activity; INVOLVED IN- regulation of transcription; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- No apical meristem (NAM) protein (InterPro-IPR003441); BEST Arabidopsis thaliana protein match is- no apical meristem (NAM) family protein (TAIR-AT1G33060.2); Has 1627 Blast hits to 1625 proteins in 54 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1627; Viruses - 0; Other Eukaryote [...] (534 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT5G51010	rubredoxin family protein; rubredoxin family protein; FUNCTIONS IN- electron carrier activity, [...] (154 aa)					•				0.923
	AT5G43460	lesion inducing protein-related; lesion inducing protein-related; FUNCTIONS IN- molecular_funct [...] (154 aa)					•				0.923
	ATCLC-A	ATCLC-A (CHLORIDE CHANNEL A); anion channel/ nitrate transmembrane transporter/ voltage-gated c [...] (775 aa)					•				0.923
	AT5G38170	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein; protease inhibitor [...] (103 aa)					•				0.923
	AT5G23550	unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unkn [...] (175 aa)					•				0.923
	AT5G20130	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (202 aa)					•				0.923
	AT5G17700	MATE efflux family protein; MATE efflux family protein; FUNCTIONS IN- drug transporter activity [...] (497 aa)					•				0.923
	ENH1	ENH1 (enhancer of sos3-1); electron carrier/ metal ion binding / protein binding; enhancer of s [...] (271 aa)					•				0.923
	FIS1B	FIS1B (FISSION 1B); binding; Encodes a protein with similarity to yeast FIS proteins. These mem [...] (167 aa)					•				0.923
	SYP132	SYP132 (SYNTAXIN OF PLANTS 132); SNAP receptor; member of SYP13 Gene Family ; Vesicle trafficki [...] (304 aa)					•				0.923

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	221
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	1e-30

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  109 bits (275), Expect = 1e-30
 Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 6/128 (4%)

Query: 6   GYKFQPSNEQIL--YLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYF 63
           G++F P++E+++  YL  +    P      I + VDI   EPWDL  +   +  D+ WYF
Sbjct: 4   GFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPE-VDIYKFEPWDLP-DGKAKGGDREWYF 61

Query: 64  FCEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNG-PTGTKKFLTFYRHGLPRKEAIT 122
           F     KY    R +R T +G+WK T KD  + ++ G   G KK L FY+ G   K   T
Sbjct: 62  FSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYK-GRAPKGEKT 120

Query: 123 EWGMHEYH 130
           +W MHEY 
Sbjct: 121 DWVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	221
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=5e-45  Score=288.26  Aligned_cols=126  Identities=33%  Similarity=0.602  Sum_probs=94.2

Q ss_pred             CCCcceEcCCHHHHHHHHHHHhcC-CCCCC-CceeccccCCCCCCccccCCCCCCCCCceEEEEeccccccCCCCCcccc
Q 045278            3 NLMGYKFQPSNEQILYLLVEKRLN-PHFSH-HPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHRR   80 (221)
Q Consensus         3 lppGfRF~PTDeELV~~YL~~Ki~-~~~~~-~~I~~~~Dvy~~~Pw~Lp~~~~~~~~~~ewYFF~~r~~k~~~g~R~~R~   80 (221)
                      |||||||+|||||||.+||++|+. .+++. .+|. ++|||++|||+|+...  ..++.+||||+++++++.++.|.+|+
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~-~~Diy~~~P~~L~~~~--~~~~~~~yFF~~~~~~~~~~~r~~R~   77 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIH-DVDIYSAHPWELPAKF--KGGDEEWYFFSPRKKKYPNGGRPNRV   77 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSE-E--GGGS-GGGCHHHS--SS-SSEEEEEEE----------S-EE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCccccee-ecccCccChHHhhhhc--cCCCceEEEEEecccccCCccccccc
Confidence            899999999999999999999999 44455 7899 9999999999999432  23677999999999999999999999


Q ss_pred             ccceeeeecCcCeeeec-CCcceeeEEEEEeeecCCCCCCcccCeEEEEEEeC
Q 045278           81 TKAGHWKITSKDSQIKA-RNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVK  132 (221)
Q Consensus        81 t~~G~Wk~tg~~k~I~~-~~~~iG~kktl~Fy~g~~p~g~~kT~WvMhEY~l~  132 (221)
                      +++|+||++|+.+.|.+ ++.+||+|++|+||.++.+++ .+|+|+||||+|.
T Consensus        78 ~~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~-~kt~W~M~EY~L~  129 (129)
T PF02365_consen   78 TGGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNG-KKTGWVMHEYSLE  129 (129)
T ss_dssp             ETTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS--EEEEEEEEEEEE-
T ss_pred             ccceEEeecccccccccccceeeeeEEEEEEEeccCCCC-CcCCeEEEEEEeC
Confidence            99999999999999998 699999999999999888888 9999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		7e-13
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		8e-13
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-12

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 6   GYKFQPSNEQILY-LLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++E+++   L  K     FS   I +I D+   +PW L  ++    ++  WYFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE--WYFF 76
Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                KY    R +R   +G+WK T  D  I       G KK L FY    P K   T W
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP-KGTKTNW 135
Query: 125 GMHEYHV-----KDDSSYKKEFILCCITRKRNKKKK 155
            MHEY +     ++ S+   +++LC I +K++  +K
Sbjct: 136 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 6   GYKFQPSNEQILY-LLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++E+++   L  K     FS   I +I D+   +PW L  ++    ++  WYFF
Sbjct: 23  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE--WYFF 79
Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                KY    R +R   +G+WK T  D  I       G KK L FY    P K   T W
Sbjct: 80  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAP-KGTKTNW 138
Query: 125 GMHEYHV-----KDDSSYKKEFILCCITRKRNKKKK 155
            MHEY +     ++ S+   +++LC I +K++  +K
Sbjct: 139 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 174

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 6   GYKFQPSNEQILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFC 65
           G++F P++++++   + ++        PI   VD+   +PWDL   +   + +  WYFF 
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGARE--WYFFT 75
Query: 66  EPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWG 125
               KY    R +R    G+WK T  D  +  R    G KK L FY    PR    T+W 
Sbjct: 76  PRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG-VKTDWI 134
Query: 126 MHEYHV----------KDDSSYKKEFILCCITRKRNKKKK 155
           MHEY +          K  S    +++LC +  K+N+ +K
Sbjct: 135 MHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
1ut7_A	171	No apical meristem protein; transcription regulati	3e-37
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	7e-36

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  127 bits (320), Expect = 3e-37
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 6   GYKFQPSNEQ-ILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++E+ ++  L  K     FS   I + +D+   +PW L  ++     ++ WYFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAE-IDLYKFDPWVLPNKAL--FGEKEWYFF 76

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                KY    R +R   +G+WK T  D  I       G KK L FY  G   K   T W
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI-GKAPKGTKTNW 135

Query: 125 GMHEYHVKDDSSY-----KKEFILCCITRKRNKKKK 155
            MHEY + + S         +++LC I +K++  +K
Sbjct: 136 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  123 bits (311), Expect = 7e-36
 Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 15/161 (9%)

Query: 6   GYKFQPSNEQ-ILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++++ + + L  K          I + VD+   +PWDL   +      + WYFF
Sbjct: 18  GFRFHPTDDELVEHYLCRKAAGQRLPVPIIAE-VDLYKFDPWDLPERAL--FGAREWYFF 74

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                KY    R +R    G+WK T  D  +  R    G KK L FY  G   +   T+W
Sbjct: 75  TPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYA-GKAPRGVKTDW 133

Query: 125 GMHEYHVKDDSSYKK----------EFILCCITRKRNKKKK 155
            MHEY + D                +++LC +  K+N+ +K
Sbjct: 134 IMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=2.6e-59  Score=386.58  Aligned_cols=147  Identities=29%  Similarity=0.603  Sum_probs=130.9

Q ss_pred             CCCCCcceEcCCHHHHHHHHHHHhcC-CCCCCCceeccccCCCCCCccccCCCCCCCCCceEEEEeccccccCCCCCccc
Q 045278            1 MENLMGYKFQPSNEQILYLLVEKRLN-PHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHR   79 (221)
Q Consensus         1 m~lppGfRF~PTDeELV~~YL~~Ki~-~~~~~~~I~~~~Dvy~~~Pw~Lp~~~~~~~~~~ewYFF~~r~~k~~~g~R~~R   79 (221)
                      +.|||||||||||||||.|||++|+. .++++.+|. ++|||++|||+||+.+..  ++.+||||+++++||++|.|++|
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~-evDvy~~~Pw~Lp~~~~~--g~~ewYFFs~r~~ky~~g~R~nR   89 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIA-EVDLYKFDPWDLPERALF--GAREWYFFTPRDRKYPNGSRPNR   89 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCE-ECCGGGSCGGGSGGGCSS--CSSEEEEEEECCC-----CCSCE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeee-ecccccCCchhhhhhhcc--CCceEEEEeccccccCCCCCcee
Confidence            47999999999999999999999999 566779999 999999999999998753  67899999999999999999999


Q ss_pred             cccceeeeecCcCeeeecCCcceeeEEEEEeeecCCCCCCcccCeEEEEEEeCCCCC----------CCCcEEEEEEEEc
Q 045278           80 RTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSS----------YKKEFILCCITRK  149 (221)
Q Consensus        80 ~t~~G~Wk~tg~~k~I~~~~~~iG~kktl~Fy~g~~p~g~~kT~WvMhEY~l~~~~~----------~~~~~VLCkI~~k  149 (221)
                      +|++||||+||+++.|..+|.+||+||+|+||.|++|+| .||+|+||||+|.....          ..++|||||||+|
T Consensus        90 ~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g-~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K  168 (174)
T 3ulx_A           90 AAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG-VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK  168 (174)
T ss_dssp             EETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSC-EEEEEEEEEEEECSCC-----------CCSSEEEEEEEES
T ss_pred             ecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCC-CcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEc
Confidence            999999999999999998899999999999999999999 99999999999987532          2579999999998


Q ss_pred             CC
Q 045278          150 RN  151 (221)
Q Consensus       150 ~~  151 (221)
                      +.
T Consensus       169 ~~  170 (174)
T 3ulx_A          169 KN  170 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            76

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.1e-58  Score=382.17  Aligned_cols=148  Identities=29%  Similarity=0.587  Sum_probs=127.7

Q ss_pred             CCCCCcceEcCCHHHHHHHHHHHhcC-CCCCCCceeccccCCCCCCccccCCCCCCCCCceEEEEeccccccCCCCCccc
Q 045278            1 MENLMGYKFQPSNEQILYLLVEKRLN-PHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHR   79 (221)
Q Consensus         1 m~lppGfRF~PTDeELV~~YL~~Ki~-~~~~~~~I~~~~Dvy~~~Pw~Lp~~~~~~~~~~ewYFF~~r~~k~~~g~R~~R   79 (221)
                      +.|||||||||||||||.|||++|+. .+++..+|+ ++|||.+|||+||+.+.  .++.+||||+++++||++|.|++|
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~-e~Diy~~~Pw~Lp~~~~--~g~~ewyFFs~r~~k~~~g~R~~R   91 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIA-EIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPNR   91 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSE-ECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CCE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEe-ecccccCChhHhhchhh--cCCccEEEEeccccccCCCCcccc
Confidence            46999999999999999999999999 556679999 99999999999999874  368899999999999999999999


Q ss_pred             cccceeeeecCcCeeeecCCcceeeEEEEEeeecCCCCCCcccCeEEEEEEeCCCC-----CCCCcEEEEEEEEcCCc
Q 045278           80 RTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDS-----SYKKEFILCCITRKRNK  152 (221)
Q Consensus        80 ~t~~G~Wk~tg~~k~I~~~~~~iG~kktl~Fy~g~~p~g~~kT~WvMhEY~l~~~~-----~~~~~~VLCkI~~k~~~  152 (221)
                      +|++|+||+||+++.|..++.+||+||+|+||.|++|+| .||+|+||||+|....     ...++|||||||+|...
T Consensus        92 ~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g-~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           92 VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG-TKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             EETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSC-EEEEEEEEEEEECCCC--------CCEEEEEEEECC--
T ss_pred             cCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCC-CcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCCC
Confidence            999999999999999998899999999999999999999 9999999999998753     24589999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	221
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-27

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  100 bits (251), Expect = 1e-27
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 6   GYKFQPSNEQ-ILYLLVEKRLNPHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFF 64
           G++F P++E+ ++  L  K     FS   I +I D+   +PW L  ++    ++  WYFF
Sbjct: 20  GFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEI-DLYKFDPWVLPNKALFGEKE--WYFF 76

Query: 65  CEPCYKYRESHRAHRRTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEW 124
                KY    R +R   +G+WK T  D  I       G KK L FY  G   K   T W
Sbjct: 77  SPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI-GKAPKGTKTNW 135

Query: 125 GMHEYHVKDD-----SSYKKEFILCCITRKR 150
            MHEY + +      S+   +++LC I +K+
Sbjct: 136 IMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.9e-55  Score=359.49  Aligned_cols=146  Identities=29%  Similarity=0.589  Sum_probs=126.5

Q ss_pred             CCCCCcceEcCCHHHHHHHHHHHhcC-CCCCCCceeccccCCCCCCccccCCCCCCCCCceEEEEeccccccCCCCCccc
Q 045278            1 MENLMGYKFQPSNEQILYLLVEKRLN-PHFSHHPIKDIVDICGLEPWDLATESTPESEDQVWYFFCEPCYKYRESHRAHR   79 (221)
Q Consensus         1 m~lppGfRF~PTDeELV~~YL~~Ki~-~~~~~~~I~~~~Dvy~~~Pw~Lp~~~~~~~~~~ewYFF~~r~~k~~~g~R~~R   79 (221)
                      |+|||||||+|||||||.|||++|+. .+++.++|+ ++|||++|||+||+...  .++.+||||+++.+++++|.|.+|
T Consensus        15 l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~-~~Dvy~~~Pw~Lp~~~~--~~~~~wyFft~~~~k~~~g~r~~R   91 (166)
T d1ut7a_          15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIA-EIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPNR   91 (166)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSE-ECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CCE
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccce-eccCCcCChhhccchhc--cCcceEEEEeeeccccCCCCcccc
Confidence            68999999999999999999999999 566779999 99999999999998764  367889999999999999999999


Q ss_pred             cccceeeeecCcCeeeecCCcceeeEEEEEeeecCCCCCCcccCeEEEEEEeCCCCC-----CCCcEEEEEEEEcC
Q 045278           80 RTKAGHWKITSKDSQIKARNGPTGTKKFLTFYRHGLPRKEAITEWGMHEYHVKDDSS-----YKKEFILCCITRKR  150 (221)
Q Consensus        80 ~t~~G~Wk~tg~~k~I~~~~~~iG~kktl~Fy~g~~p~g~~kT~WvMhEY~l~~~~~-----~~~~~VLCkI~~k~  150 (221)
                      +|++|+||++|+++.|.++|.+||+||+|+||+++.+++ .+|+|+||||+|.+...     ..++|||||||+|+
T Consensus        92 ~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~-~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          92 VAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKG-TKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSC-EEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             ccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCC-CccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            999999999999999998899999999999999999999 99999999999986432     34789999999884