Citrus Sinensis ID: 045358

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEccEEEcHHHHHHHHHHHHcccccccccccccEEEEEEcccccHHHHHHHccccccccccccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEccccccccEEEcEEEEccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccccccccHHHHHHHHHHHHHHHHHccccccEEEHHEEcccEEEEEEEEEcccEEcHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHcHHHccccccccEEEccccccHHHccHHHHHHHHHHHHHHHHHHccccccEccccccEEEEEEEccccEEEEEEEEEEEEEEccccc
Coil and Loop (DISEMBL)
metflftsesvneghpdklcdQVSDAVLDAclaqdpdskvacetctktnMVMVFGEITTKANVDYEKIVRDTCRsigftsadvgldadHCKVLVNIeqqspdiaqgvhghltkrpeeigagdqghmfgyatdetpelmplSHVLATKLGAKLTEvrkngtcpwlrpdgktqVTVEYYNENGAMVPVRVHTVLISTQHDET
Flexible Loop (DISEMBL)
METFLFtsesvneghpdkLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEittkanvdyeKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTevrkngtcpwlrpdgktQVTVEYYNENGAMVPVRVHTVLISTQHDET
Low Complexity Region (SEG)
METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET
Disordered region (IsUnstruct)
******************LCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQS*DIAQGVH***************GHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLI*******
Disordered Region (DISOPRED)
*ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVL*STQH***
Disordered Region (DISEMBL)
*************GHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET
Disordered Region (DISPRO)
*****FT**SVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQ****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	200	2.2.26 [Sep-21-2011]
Q9AT56	393	S-adenosylmethionine synt	N/A	no	1.0	0.508	0.955	1e-112
A9PEK8	395	S-adenosylmethionine synt	yes	no	0.995	0.503	0.959	1e-112
Q96552	393	S-adenosylmethionine synt	N/A	no	1.0	0.508	0.95	1e-112
P47916	395	S-adenosylmethionine synt	N/A	no	0.995	0.503	0.959	1e-112
Q8GTL5	429	S-adenosylmethionine synt	N/A	no	1.0	0.466	0.955	1e-112
Q84MM2	393	S-adenosylmethionine synt	N/A	no	1.0	0.508	0.96	1e-112
Q96551	393	S-adenosylmethionine synt	N/A	no	1.0	0.508	0.955	1e-112
Q6F3F0	396	S-adenosylmethionine synt	N/A	no	1.0	0.505	0.94	1e-112
Q4H1G3	393	S-adenosylmethionine synt	N/A	no	1.0	0.508	0.96	1e-112
Q9FPL6	395	S-adenosylmethionine synt	N/A	no	1.0	0.506	0.945	1e-112

>sp|Q9AT56|METK1_ELAUM S-adenosylmethionine synthase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1

 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 196/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61  ANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNEN
Sbjct: 121 GDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
Elaeagnus umbellata (taxid: 43233)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 6

>sp|A9PEK8|METK3_POPTR S-adenosylmethionine synthase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1

 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/199 (95%), Positives = 197/199 (98%)

Query: 2   ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 61
           ETFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA
Sbjct: 3   ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 62

Query: 62  NVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG 121
           +VDYEKIVRDTCR+IGFTSADVGLDAD+CKVLVNIEQQSPDIAQGVHGH +KRPEEIGAG
Sbjct: 63  DVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAG 122

Query: 122 DQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENG 181
           DQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENG
Sbjct: 123 DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENG 182

Query: 182 AMVPVRVHTVLISTQHDET 200
           AMVPVRVHTVLISTQHDET
Sbjct: 183 AMVPVRVHTVLISTQHDET 201

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Populus trichocarpa (taxid: 3694)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q96552|METK2_CATRO S-adenosylmethionine synthase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 190/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 61  AQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVP+RVHTVLISTQHDET
Sbjct: 181 GAMVPIRVHTVLISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Catharanthus roseus (taxid: 4058)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|P47916|METK_POPDE S-adenosylmethionine synthase OS=Populus deltoides GN=METK PE=2 SV=1

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/199 (95%), Positives = 197/199 (98%)

Query: 2   ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 61
           ETFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA
Sbjct: 3   ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 62

Query: 62  NVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG 121
           +VDYEKIVRDTCR+IGFTSADVGLDAD+CKVLVNIEQQSPDIAQGVHGH +KRPEEIGAG
Sbjct: 63  DVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAG 122

Query: 122 DQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENG 181
           DQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENG
Sbjct: 123 DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENG 182

Query: 182 AMVPVRVHTVLISTQHDET 200
           AMVPVRVHTVLISTQHDET
Sbjct: 183 AMVPVRVHTVLISTQHDET 201

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Populus deltoides (taxid: 3696)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q8GTL5|METK_CARPA S-adenosylmethionine synthase OS=Carica papaya GN=SAMS PE=2 SV=1

 Score =  404 bits (1037), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 194/200 (97%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A+VDYEKIVRDTCRSIGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61  ADVDYEKIVRDTCRSIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNEN
Sbjct: 121 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GA VPVRVHTVLISTQHDET
Sbjct: 181 GARVPVRVHTVLISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Carica papaya (taxid: 3649)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q84MM2|METK_LITCN S-adenosylmethionine synthase OS=Litchi chinensis GN=SAMS PE=2 SV=1

 Score =  403 bits (1036), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/200 (96%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCT+TNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYE+IVRDTCRSIGFTS DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEEIGA
Sbjct: 61  ANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYN N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Litchi chinensis (taxid: 151069)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q96551|METK1_CATRO S-adenosylmethionine synthase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1

 Score =  403 bits (1036), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 195/200 (97%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDYEKIVRDTCRSIGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 61  ATVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNEN
Sbjct: 121 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTV+ISTQHDET
Sbjct: 181 GAMVPVRVHTVVISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Catharanthus roseus (taxid: 4058)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q6F3F0|METK3_ATRNU S-adenosylmethionine synthase 3 OS=Atriplex nummularia GN=SAMS3 PE=1 SV=1

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 188/200 (94%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           ++TFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTN+VMVFGEITTK
Sbjct: 5   VDTFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNLVMVFGEITTK 64

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVR TCR IGF SADVGLDAD+CKVLVNIEQQSPDIAQGVHGHLT+RPEEIGA
Sbjct: 65  ANVDYEKIVRQTCRDIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTRRPEEIGA 124

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNEN
Sbjct: 125 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 184

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVP+RVHTVLISTQHDET
Sbjct: 185 GAMVPIRVHTVLISTQHDET 204

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity). May be involved in the synthesis of betain in response to abiotic stress such as high salinity.

Atriplex nummularia (taxid: 3553)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q4H1G3|METK2_BETVU S-adenosylmethionine synthase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 192/200 (96%), Positives = 195/200 (97%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDP+SKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDYEKIVRDTCRSIGFTS DVGLDAD CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 61  AEVDYEKIVRDTCRSIGFTSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNG C WLRPDGKTQVTVEYYN+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYYNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity). May be involved in the synthesis of betain in response to abiotic stress such as high salinity.

Beta vulgaris (taxid: 161934)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

>sp|Q9FPL6|METK2_SUASA S-adenosylmethionine synthase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/200 (94%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           ME+FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 1   MESFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           AN+DYEKIVRDTCRSIGF SADVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPE++GA
Sbjct: 61  ANIDYEKIVRDTCRSIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEDVGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEY N+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVP+RVHTVLISTQHDET
Sbjct: 181 GAMVPIRVHTVLISTQHDET 200

Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.

Suaeda salsa (taxid: 126914)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
189345252	307	S-adenosylmethionine synthetase [Panax g	1.0	0.651	0.965	1e-111
449522051	401	PREDICTED: S-adenosylmethionine synthase	1.0	0.498	0.955	1e-111
449436329	393	PREDICTED: S-adenosylmethionine synthase	1.0	0.508	0.955	1e-111
449522053	393	PREDICTED: S-adenosylmethionine synthase	1.0	0.508	0.955	1e-111
449472806	393	PREDICTED: S-adenosylmethionine synthase	1.0	0.508	0.955	1e-111
449472803	401	PREDICTED: S-adenosylmethionine synthase	1.0	0.498	0.955	1e-111
255543014	403	s-adenosylmethionine synthetase, putativ	1.0	0.496	0.955	1e-111
75308026	393	RecName: Full=S-adenosylmethionine synth	1.0	0.508	0.955	1e-111
223635300	395	RecName: Full=S-adenosylmethionine synth	0.995	0.503	0.959	1e-111
3024127	393	RecName: Full=S-adenosylmethionine synth	1.0	0.508	0.95	1e-110

>gi|189345252|gb|ACD92982.1| S-adenosylmethionine synthetase [Panax ginseng]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/200 (96%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCRSIGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEEIGA
Sbjct: 61  ANVDYEKIVRDTCRSIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYNEN
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNEN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Source: Panax ginseng

Species: Panax ginseng

Genus: Panax

Family: Araliaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522051|ref|XP_004168041.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 1 [Cucumis sativus]

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 9   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 68

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 69  ANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 128

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 129 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 188

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 189 GAMVPVRVHTVLISTQHDET 208

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449436329|ref|XP_004135945.1| PREDICTED: S-adenosylmethionine synthase 1-like [Cucumis sativus] gi|449436367|ref|XP_004135964.1| PREDICTED: S-adenosylmethionine synthase 1-like [Cucumis sativus]

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61  ANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522053|ref|XP_004168042.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 2 [Cucumis sativus] gi|449522055|ref|XP_004168043.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 3 [Cucumis sativus] gi|449522057|ref|XP_004168044.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 4 [Cucumis sativus]

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61  ANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449472806|ref|XP_004153700.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 2 [Cucumis sativus] gi|449472809|ref|XP_004153701.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 3 [Cucumis sativus] gi|449523886|ref|XP_004168954.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 4 [Cucumis sativus] gi|449523888|ref|XP_004168955.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 5 [Cucumis sativus]

 Score =  405 bits (1040), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61  ANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449472803|ref|XP_004153699.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 1 [Cucumis sativus] gi|449523880|ref|XP_004168951.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 1 [Cucumis sativus] gi|449523882|ref|XP_004168952.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 2 [Cucumis sativus] gi|449523884|ref|XP_004168953.1| PREDICTED: S-adenosylmethionine synthase 1-like isoform 3 [Cucumis sativus]

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 9   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 68

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 69  ANVDYEKIVRDTCRNIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 128

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 129 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 188

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 189 GAMVPVRVHTVLISTQHDET 208

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543014|ref|XP_002512570.1| s-adenosylmethionine synthetase, putative [Ricinus communis] gi|223548531|gb|EEF50022.1| s-adenosylmethionine synthetase, putative [Ricinus communis]

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 195/200 (97%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQVSDA+LDACL QDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 11  METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTK 70

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 71  ANVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 130

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 131 GDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 190

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 191 GAMVPVRVHTVLISTQHDET 210

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75308026|sp|Q9AT56.1|METK1_ELAUM RecName: Full=S-adenosylmethionine synthase 1; Short=AdoMet synthase 1; AltName: Full=Methionine adenosyltransferase 1; Short=MAT 1 gi|13540316|gb|AAK29409.1|AF346305_1 S-adenosyl-L-methionine synthetase [Elaeagnus umbellata]

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/200 (95%), Positives = 196/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETC+KTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           ANVDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPEEIGA
Sbjct: 61  ANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYNEN
Sbjct: 121 GDQGHMFGYATDETPEYMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVPVRVHTVLISTQHDET
Sbjct: 181 GAMVPVRVHTVLISTQHDET 200

Source: Elaeagnus umbellata

Species: Elaeagnus umbellata

Genus: Elaeagnus

Family: Elaeagnaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223635300|sp|A9PEK8.1|METK3_POPTR RecName: Full=S-adenosylmethionine synthase 3; Short=AdoMet synthase 3; AltName: Full=Methionine adenosyltransferase 3; Short=MAT 3 gi|118485932|gb|ABK94811.1| unknown [Populus trichocarpa]

 Score =  404 bits (1039), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/199 (95%), Positives = 197/199 (98%)

Query: 2   ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 61
           ETFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA
Sbjct: 3   ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 62

Query: 62  NVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAG 121
           +VDYEKIVRDTCR+IGFTSADVGLDAD+CKVLVNIEQQSPDIAQGVHGH +KRPEEIGAG
Sbjct: 63  DVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAG 122

Query: 122 DQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENG 181
           DQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYNENG
Sbjct: 123 DQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENG 182

Query: 182 AMVPVRVHTVLISTQHDET 200
           AMVPVRVHTVLISTQHDET
Sbjct: 183 AMVPVRVHTVLISTQHDET 201

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3024127|sp|Q96552.1|METK2_CATRO RecName: Full=S-adenosylmethionine synthase 2; Short=AdoMet synthase 2; AltName: Full=Methionine adenosyltransferase 2; Short=MAT 2 gi|1655578|emb|CAA95857.1| S-adenosyl-L-methionine synthetase 2 [Catharanthus roseus]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/200 (95%), Positives = 197/200 (98%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDP+SKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA
Sbjct: 61  AQVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEYYN+N
Sbjct: 121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDN 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVP+RVHTVLISTQHDET
Sbjct: 181 GAMVPIRVHTVLISTQHDET 200

Source: Catharanthus roseus

Species: Catharanthus roseus

Genus: Catharanthus

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
TAIR|locus:2141385	393	SAM-2 "S-adenosylmethionine sy	1.0	0.508	0.935	2.3e-101
TAIR|locus:2089070	393	MTO3 "METHIONINE OVER-ACCUMULA	1.0	0.508	0.92	7.9e-101
TAIR|locus:2196160	393	SAM1 "S-adenosylmethionine syn	1.0	0.508	0.93	2.7e-100
TAIR|locus:2058011	390	MAT3 "methionine adenosyltrans	1.0	0.512	0.9	5.8e-98
DICTYBASE|DDB_G0291179	384	metK "S-adenosylmethionine syn	0.985	0.513	0.705	2e-72
ZFIN|ZDB-GENE-030131-6127	390	mat1a "methionine adenosyltran	0.975	0.5	0.670	3e-69
UNIPROTKB|A7E3T7	395	MAT2A "S-adenosylmethionine sy	0.975	0.493	0.670	3.8e-69
UNIPROTKB|D0G777	395	MATA2 "S-adenosylmethionine sy	0.975	0.493	0.670	3.8e-69
RGD|2322041	387	LOC100363915 "rCG56483-like" [	0.975	0.503	0.659	1e-68
UNIPROTKB|E2R431	395	MAT2A "Uncharacterized protein	0.975	0.493	0.664	1.3e-68

TAIR|locus:2141385 SAM-2 "S-adenosylmethionine synthetase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1005 (358.8 bits), Expect = 2.3e-101, P = 2.3e-101
 Identities = 187/200 (93%), Positives = 193/200 (96%)

Query:     1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
             METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTK
Sbjct:     1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query:    61 ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
             A +DYEKIVRDTCRSIGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGH TKRPE+IGA
Sbjct:    61 ATIDYEKIVRDTCRSIGFISDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGA 120

Query:   121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
             GDQGHMFGYATDETPELMPLSHVLATK+GA+LTEVRKNGTC WLRPDGKTQVTVEYYN+N
Sbjct:   121 GDQGHMFGYATDETPELMPLSHVLATKIGARLTEVRKNGTCRWLRPDGKTQVTVEYYNDN 180

Query:   181 GAMVPVRVHTVLISTQHDET 200
             GAMVPVRVHTVLISTQHDET
Sbjct:   181 GAMVPVRVHTVLISTQHDET 200

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA;ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0005829 "cytosol" evidence=IDA;RCA

GO:0070062 "extracellular vesicular exosome" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

TAIR|locus:2089070 MTO3 "METHIONINE OVER-ACCUMULATOR 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
 Identities = 184/200 (92%), Positives = 195/200 (97%)

Query:     1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
             ME+FLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITTK
Sbjct:     1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTK 60

Query:    61 ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
             ANVDYE+IVR TCR IGF SADVGLDAD+CKVLVNIEQQSPDIAQGVHGHLTK+PEE+GA
Sbjct:    61 ANVDYEQIVRKTCREIGFVSADVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEVGA 120

Query:   121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
             GDQGHMFGYATDETPELMPL+HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVT+EY NE+
Sbjct:   121 GDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINES 180

Query:   181 GAMVPVRVHTVLISTQHDET 200
             GAMVPVRVHTVLISTQHDET
Sbjct:   181 GAMVPVRVHTVLISTQHDET 200

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA;ISS

GO:0006555 "methionine metabolic process" evidence=IMP

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0005730 "nucleolus" evidence=IDA

GO:0005618 "cell wall" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2196160 SAM1 "S-adenosylmethionine synthetase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
 Identities = 186/200 (93%), Positives = 191/200 (95%)

Query:     1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
             METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDPDSKVACETCTKTNMVMVFGEITTK
Sbjct:     1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTK 60

Query:    61 ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
             A VDYEKIVRDTCR+IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGH TK PEEIGA
Sbjct:    61 ATVDYEKIVRDTCRAIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFTKCPEEIGA 120

Query:   121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
             GDQGHMFGYATDETPELMPLSHVLATKLGA+LTEVRKNGTC WLRPDGKTQVTVEYYN+ 
Sbjct:   121 GDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNDK 180

Query:   181 GAMVPVRVHTVLISTQHDET 200
             GAMVP+RVHTVLISTQHDET
Sbjct:   181 GAMVPIRVHTVLISTQHDET 200

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0009693 "ethylene biosynthetic process" evidence=TAS

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0007033 "vacuole organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

TAIR|locus:2058011 MAT3 "methionine adenosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
 Identities = 180/200 (90%), Positives = 189/200 (94%)

Query:     1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
             METFLFTSESVNEGHPDKLCDQ+SDA+LDACL QDP+SKVACETCTKTNMVMVFGEITT 
Sbjct:     1 METFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTA 60

Query:    61 ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
             A VDYEKIVR TCR IGF SADVGLDAD C VLVNIEQQSPDIAQGVHGHLTK+PE+IGA
Sbjct:    61 AKVDYEKIVRSTCREIGFISADVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKKPEDIGA 120

Query:   121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
             GDQGHMFGYATDETPELMPL+HVLATKLGAKLTEVRKN TCPWLRPDGKTQVTVEY N+ 
Sbjct:   121 GDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDG 180

Query:   181 GAMVPVRVHTVLISTQHDET 200
             GAM+P+RVHTVLISTQHDET
Sbjct:   181 GAMIPIRVHTVLISTQHDET 200

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006598 "polyamine catabolic process" evidence=RCA

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0009698 "phenylpropanoid metabolic process" evidence=RCA

GO:0042398 "cellular modified amino acid biosynthetic process" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

DICTYBASE|DDB_G0291179 metK "S-adenosylmethionine synthetase" [Dictyostelium discoideum (taxid:44689)]

 Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
 Identities = 141/200 (70%), Positives = 161/200 (80%)

Query:     1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
             M ++LFTSESV EGHPDK+CDQVSDAVLDACLAQDP SKVACET TKT MVM+ GEITTK
Sbjct:     1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTK 60

Query:    61 ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH-GHLTKRPEEIG 119
             ANVDY+K+VR+  + IG+  +  G D   C VLV IEQQSPDIAQGVH G +   PE+IG
Sbjct:    61 ANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVHIGKVN--PEDIG 118

Query:   120 AGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNE 179
             AGDQGHMFGYAT+ETP LMPL+H LA++L  KLTE+R NGT  W RPD KTQVTVEY  E
Sbjct:   119 AGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKE 178

Query:   180 NGAMVPVRVHTVLISTQHDE 199
                + PVRVHT++ISTQHDE
Sbjct:   179 GHKITPVRVHTIVISTQHDE 198

GO:0005615 "extracellular space" evidence=IDA

GO:0045335 "phagocytic vesicle" evidence=IDA

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA;ISS

GO:0048269 "methionine adenosyltransferase complex" evidence=ISS

GO:0006555 "methionine metabolic process" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ZFIN|ZDB-GENE-030131-6127 mat1a "methionine adenosyltransferase I, alpha" [Danio rerio (taxid:7955)]

 Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
 Identities = 132/197 (67%), Positives = 162/197 (82%)

Query:     3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
             +F+FTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT MV++ GEIT++AN
Sbjct:    12 SFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVCKTGMVLLCGEITSRAN 71

Query:    63 VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD 122
             VDY+KIVRDT + IG+ +++ G D   C VLV +EQQSPDIAQGVH  + +  E+IGAGD
Sbjct:    72 VDYQKIVRDTIKHIGYDNSEKGFDYKTCNVLVALEQQSPDIAQGVH--VDRHEEDIGAGD 129

Query:   123 QGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 182
             QG MFGYATDET E MPL+ VLA KL +K+ E+R++GT PWLRPD KTQVTV Y  ENGA
Sbjct:   130 QGLMFGYATDETEECMPLTIVLAHKLNSKMAELRRDGTIPWLRPDSKTQVTVHYKQENGA 189

Query:   183 MVPVRVHTVLISTQHDE 199
             ++P+RVHTV+IS QHD+
Sbjct:   190 VIPLRVHTVVISVQHDD 206

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|A7E3T7 MAT2A "S-adenosylmethionine synthase" [Bos taurus (taxid:9913)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 132/197 (67%), Positives = 159/197 (80%)

Query:     3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
             TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A 
Sbjct:    17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAA 76

Query:    63 VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD 122
             VDY+K+VR+T + IG+  +  G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGD
Sbjct:    77 VDYQKVVRETIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGD 134

Query:   123 QGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 182
             QG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+Y  + GA
Sbjct:   135 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194

Query:   183 MVPVRVHTVLISTQHDE 199
             ++P+RVHT++IS QHDE
Sbjct:   195 VLPIRVHTIVISVQHDE 211

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|D0G777 MATA2 "S-adenosylmethionine synthase" [Sus scrofa (taxid:9823)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 132/197 (67%), Positives = 159/197 (80%)

Query:     3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
             TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A 
Sbjct:    17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAA 76

Query:    63 VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD 122
             VDY+K+VR+T + IG+  +  G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGD
Sbjct:    77 VDYQKVVRETIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGD 134

Query:   123 QGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 182
             QG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+Y  + GA
Sbjct:   135 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194

Query:   183 MVPVRVHTVLISTQHDE 199
             ++P+RVHT++IS QHDE
Sbjct:   195 VLPIRVHTIVISVQHDE 211

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|2322041 LOC100363915 "rCG56483-like" [Rattus norvegicus (taxid:10116)]

 Score = 697 (250.4 bits), Expect = 1.0e-68, P = 1.0e-68
 Identities = 130/197 (65%), Positives = 158/197 (80%)

Query:     3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
             TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A 
Sbjct:    17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAA 76

Query:    63 VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD 122
             +DY+K+VR+  + IG+  +  G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGD
Sbjct:    77 IDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGD 134

Query:   123 QGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 182
             QG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+Y  + GA
Sbjct:   135 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194

Query:   183 MVPVRVHTVLISTQHDE 199
             ++P+RVHT++IS QHDE
Sbjct:   195 VIPIRVHTIVISVQHDE 211

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2R431 MAT2A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
 Identities = 131/197 (66%), Positives = 158/197 (80%)

Query:     3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
             TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A 
Sbjct:    17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAA 76

Query:    63 VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD 122
             VDY+K+VR+  + IG+  +  G D   C VLV +EQQSPDIAQGVH  L +  E+IGAGD
Sbjct:    77 VDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH--LDRNEEDIGAGD 134

Query:   123 QGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 182
             QG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+Y  + GA
Sbjct:   135 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 194

Query:   183 MVPVRVHTVLISTQHDE 199
             ++P+RVHT++IS QHDE
Sbjct:   195 VLPIRVHTIVISVQHDE 211

GO:0006556 "S-adenosylmethionine biosynthetic process" evidence=IEA

GO:0004478 "methionine adenosyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006730 "one-carbon metabolic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q96551	METK1_CATRO	2, ., 5, ., 1, ., 6	0.955	1.0	0.5089	N/A	no
Q96552	METK2_CATRO	2, ., 5, ., 1, ., 6	0.95	1.0	0.5089	N/A	no
A9PHE9	METK5_POPTR	2, ., 5, ., 1, ., 6	0.9497	0.995	0.5037	yes	no
Q8GTL5	METK_CARPA	2, ., 5, ., 1, ., 6	0.955	1.0	0.4662	N/A	no
A7Q0V4	METK5_VITVI	2, ., 5, ., 1, ., 6	0.945	1.0	0.5115	yes	no
Q4LB21	METK4_HORVU	2, ., 5, ., 1, ., 6	0.935	1.0	0.5050	N/A	no
Q6SYB9	METK2_TOBAC	2, ., 5, ., 1, ., 6	0.9396	0.995	0.5102	N/A	no
A7NVX9	METK2_VITVI	2, ., 5, ., 1, ., 6	0.94	1.0	0.5089	yes	no
A9PEK8	METK3_POPTR	2, ., 5, ., 1, ., 6	0.9597	0.995	0.5037	yes	no
Q84MM2	METK_LITCN	2, ., 5, ., 1, ., 6	0.96	1.0	0.5089	N/A	no
P49611	METK1_BRAJU	2, ., 5, ., 1, ., 6	0.945	1.0	0.5089	N/A	no
P49613	METK2_PEA	2, ., 5, ., 1, ., 6	0.9346	0.995	0.5320	N/A	no
P43281	METK2_SOLLC	2, ., 5, ., 1, ., 6	0.935	1.0	0.5089	N/A	no
P93254	METK_MESCR	2, ., 5, ., 1, ., 6	0.94	1.0	0.5102	N/A	no
Q9SBQ5	METK2_PETHY	2, ., 5, ., 1, ., 6	0.93	1.0	0.5128	N/A	no
P50301	METK1_ACTCH	2, ., 5, ., 1, ., 6	0.925	1.0	0.5128	N/A	no
P50302	METK2_ACTCH	2, ., 5, ., 1, ., 6	0.93	1.0	0.5128	N/A	no
A4PU48	METK_MEDTR	2, ., 5, ., 1, ., 6	0.9346	0.995	0.5050	N/A	no
P47916	METK_POPDE	2, ., 5, ., 1, ., 6	0.9597	0.995	0.5037	N/A	no
Q5DNB1	METK_BRARP	2, ., 5, ., 1, ., 6	0.945	1.0	0.5089	N/A	no
B0LXM0	METK_WHEAT	2, ., 5, ., 1, ., 6	0.93	1.0	0.5050	N/A	no
A2Y053	METK1_ORYSI	2, ., 5, ., 1, ., 6	0.94	1.0	0.5050	N/A	no
Q94FA4	METK5_BRAJU	2, ., 5, ., 1, ., 6	0.945	1.0	0.5089	N/A	no
Q6F3F0	METK3_ATRNU	2, ., 5, ., 1, ., 6	0.94	1.0	0.5050	N/A	no
Q6F3F1	METK4_ATRNU	2, ., 5, ., 1, ., 6	0.935	1.0	0.5050	N/A	no
Q8W3Y4	METK_PHALU	2, ., 5, ., 1, ., 6	0.9396	0.995	0.5076	N/A	no
Q9FUZ1	METK2_BRAJU	2, ., 5, ., 1, ., 6	0.935	1.0	0.5089	N/A	no
P17562	METK2_ARATH	2, ., 5, ., 1, ., 6	0.935	1.0	0.5089	yes	no
P43282	METK3_SOLLC	2, ., 5, ., 1, ., 6	0.935	1.0	0.5128	N/A	no
Q7XZR1	METK1_ATRNU	2, ., 5, ., 1, ., 6	0.93	1.0	0.5050	N/A	no
Q9SBQ7	METK3_PETHY	2, ., 5, ., 1, ., 6	0.94	1.0	0.5089	N/A	no
Q6F3F3	METK2_ATRNU	2, ., 5, ., 1, ., 6	0.92	1.0	0.5050	N/A	no
Q9M7K8	METK1_TOBAC	2, ., 5, ., 1, ., 6	0.935	1.0	0.5128	N/A	no
O22338	METK_MUSAC	2, ., 5, ., 1, ., 6	0.9346	0.995	0.5063	N/A	no
A4ULF8	METK_MEDFA	2, ., 5, ., 1, ., 6	0.9296	0.995	0.5025	N/A	no
A7L2Z6	METK_GOSHI	2, ., 5, ., 1, ., 6	0.93	1.0	0.5089	N/A	no
Q0DKY4	METK1_ORYSJ	2, ., 5, ., 1, ., 6	0.94	1.0	0.5050	yes	no
A9P822	METK1_POPTR	2, ., 5, ., 1, ., 6	0.935	1.0	0.5102	yes	no
Q4H1G3	METK2_BETVU	2, ., 5, ., 1, ., 6	0.96	1.0	0.5089	N/A	no
Q4H1G4	METK1_BETVU	2, ., 5, ., 1, ., 6	0.925	1.0	0.5050	N/A	no
Q38JH8	METK2_SOLTU	2, ., 5, ., 1, ., 6	0.935	1.0	0.5128	N/A	no
Q9AT55	METK2_ELAUM	2, ., 5, ., 1, ., 6	0.945	1.0	0.5089	N/A	no
Q9AT56	METK1_ELAUM	2, ., 5, ., 1, ., 6	0.955	1.0	0.5089	N/A	no
Q9FPL6	METK2_SUASA	2, ., 5, ., 1, ., 6	0.945	1.0	0.5063	N/A	no
P48498	METK1_PETHY	2, ., 5, ., 1, ., 6	0.93	1.0	0.5128	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.5.1.6	0.914
3rd Layer	2.5.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	200
PLN02243	386	PLN02243, PLN02243, S-adenosylmethionine synthase	1e-160
PTZ00104	398	PTZ00104, PTZ00104, S-adenosylmethionine synthase;	1e-142
PRK05250	384	PRK05250, PRK05250, S-adenosylmethionine synthetas	1e-122
COG0192	388	COG0192, MetK, S-adenosylmethionine synthetase [Co	1e-115
TIGR01034	377	TIGR01034, metK, S-adenosylmethionine synthetase	1e-106
PRK12459	386	PRK12459, PRK12459, S-adenosylmethionine synthetas	4e-94
pfam00438	100	pfam00438, S-AdoMet_synt_N, S-adenosylmethionine s	6e-65
pfam02772	119	pfam02772, S-AdoMet_synt_M, S-adenosylmethionine s	3e-53

>gnl|CDD|177886 PLN02243, PLN02243, S-adenosylmethionine synthase

 Score =  446 bits (1150), Expect = e-160
 Identities = 188/200 (94%), Positives = 193/200 (96%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           METFLFTSESVNEGHPDKLCDQ+SDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK
Sbjct: 1   METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDYEKIVRDTCR IGF S DVGLDAD CKVLVNIEQQSPDIAQGVHGHLTK+PEEIGA
Sbjct: 61  AKVDYEKIVRDTCREIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQGHMFGYATDETPELMPL+HVLATKLGA+LTEVRKNGTCPWLRPDGKTQVTVEY NE 
Sbjct: 121 GDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYKNEG 180

Query: 181 GAMVPVRVHTVLISTQHDET 200
           GAMVP+RVHTVLISTQHDET
Sbjct: 181 GAMVPIRVHTVLISTQHDET 200

Length = 386

>gnl|CDD|240268 PTZ00104, PTZ00104, S-adenosylmethionine synthase; Provisional

 Score =  401 bits (1033), Expect = e-142
 Identities = 147/200 (73%), Positives = 164/200 (82%), Gaps = 3/200 (1%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           +  FLFTSESV+EGHPDKLCDQ+SDAVLDACLAQDP SKVACETC KT MVMVFGEITTK
Sbjct: 8   VGHFLFTSESVSEGHPDKLCDQISDAVLDACLAQDPLSKVACETCAKTGMVMVFGEITTK 67

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDY+K+VRDT + IG+   + GLD   C VLV IEQQSPDIAQGVH    K+ E+IGA
Sbjct: 68  AVVDYQKVVRDTVKEIGYDDTEKGLDYKTCNVLVAIEQQSPDIAQGVHVG--KKEEDIGA 125

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNE 179
           GDQG MFGYATDET ELMPL+H LATKL  +L+E+RKNG  PWLRPD KTQVTVEY Y+ 
Sbjct: 126 GDQGIMFGYATDETEELMPLTHELATKLAKRLSELRKNGILPWLRPDAKTQVTVEYEYDT 185

Query: 180 NGAMVPVRVHTVLISTQHDE 199
            G + P RVHT+LISTQHDE
Sbjct: 186 RGGLTPKRVHTILISTQHDE 205

Length = 398

>gnl|CDD|235374 PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated

 Score =  350 bits (900), Expect = e-122
 Identities = 123/196 (62%), Positives = 153/196 (78%), Gaps = 7/196 (3%)

Query: 4   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANV 63
           +LFTSESV+EGHPDK+ DQ+SDA+LDA LAQDP+++VACET   T +V+V GEITT A V
Sbjct: 3   YLFTSESVSEGHPDKIADQISDAILDAILAQDPNARVACETLVTTGLVVVAGEITTSAYV 62

Query: 64  DYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQ 123
           D E+IVR+T + IG+TS++ G DA+ C VLV+I +QSPDIAQGV        +EIGAGDQ
Sbjct: 63  DIEEIVRETIKEIGYTSSEYGFDANTCAVLVSIGEQSPDIAQGVD---RDELDEIGAGDQ 119

Query: 124 GHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAM 183
           G MFGYA +ETPELMPL   LA +L  +L EVRK+GT P+LRPD K+QVTVEY  ENG  
Sbjct: 120 GIMFGYACNETPELMPLPITLAHRLVRRLAEVRKSGTLPYLRPDAKSQVTVEY--ENG-- 175

Query: 184 VPVRVHTVLISTQHDE 199
            PVR+ T+++STQHD 
Sbjct: 176 KPVRIDTIVVSTQHDP 191

Length = 384

>gnl|CDD|223270 COG0192, MetK, S-adenosylmethionine synthetase [Coenzyme metabolism]

 Score =  333 bits (855), Expect = e-115
 Identities = 122/199 (61%), Positives = 147/199 (73%), Gaps = 4/199 (2%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
            + FLFTSESV+EGHPDK+CDQ+SDA+LDA L QDP+S+VACET   T +V++ GEITT 
Sbjct: 2   KKYFLFTSESVSEGHPDKICDQISDAILDAILKQDPNSRVACETLVTTGLVVIAGEITTS 61

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VD   I R T + IG+T +D G DA  C VLV I +QSPDIAQGV     +  +EIGA
Sbjct: 62  AYVDIVNIARKTIKEIGYTESDYGFDAKTCAVLVAIGEQSPDIAQGVDEAD-EELDEIGA 120

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQG MFGYA +ETPELMPL   LA +L  +L EVRKNG  PWLRPD K+QVTVE Y +N
Sbjct: 121 GDQGIMFGYACNETPELMPLPISLAHRLLRRLAEVRKNGELPWLRPDAKSQVTVE-YEDN 179

Query: 181 GAMVPVRVHTVLISTQHDE 199
           G   PVR+ T+++STQHD 
Sbjct: 180 G--KPVRIDTIVVSTQHDP 196

Length = 388

>gnl|CDD|233241 TIGR01034, metK, S-adenosylmethionine synthetase

 Score =  309 bits (794), Expect = e-106
 Identities = 121/195 (62%), Positives = 145/195 (74%), Gaps = 7/195 (3%)

Query: 5   LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVD 64
           LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP +KVACET  KT +V++ GEITT A VD
Sbjct: 1   LFTSESVSEGHPDKIADQISDAVLDAILKQDPKAKVACETFVKTGLVLIGGEITTSAYVD 60

Query: 65  YEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124
            +++ R+T + IG+T +D G DA  C VLV I  QSPDIAQGV       PEE GAGDQG
Sbjct: 61  IQEVARNTIKDIGYTDSDYGFDAKTCAVLVAIGNQSPDIAQGVDK---ANPEEQGAGDQG 117

Query: 125 HMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMV 184
            MFGYAT+ETPELMPL   LA KL  +  E+RK+GT PWLRPDGK+QVTV+Y +      
Sbjct: 118 IMFGYATNETPELMPLPITLAHKLLKRAAELRKSGTLPWLRPDGKSQVTVQYEDNK---- 173

Query: 185 PVRVHTVLISTQHDE 199
           PVRV T+++STQHD 
Sbjct: 174 PVRVDTIVLSTQHDP 188

Tandem isozymes of this S-adenosylmethionine synthetase in E. coli are designated MetK and MetX [Central intermediary metabolism, Other]. Length = 377

>gnl|CDD|237106 PRK12459, PRK12459, S-adenosylmethionine synthetase; Provisional

 Score =  279 bits (715), Expect = 4e-94
 Identities = 121/202 (59%), Positives = 144/202 (71%), Gaps = 8/202 (3%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           M TFLFTSESV EGHPDKLCDQ+SDA+LDACL QDP S+VACE    T +V+V GEIT+ 
Sbjct: 1   MSTFLFTSESVTEGHPDKLCDQISDAILDACLRQDPASRVACEVLVSTGIVIVAGEITSS 60

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGV--HGHLTKRPEEI 118
           A VD EKIVR+  + IG+     G D   C VLV++ +QSPDIAQGV       +  EE+
Sbjct: 61  AKVDIEKIVRNVIKEIGYDEL--GFDPRTCTVLVSLGEQSPDIAQGVDTAEGRDEELEEL 118

Query: 119 GAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYN 178
           GAGDQG MFGYA DETPELMPL  VLA +L  +L + RK+G  P L PDGKTQVTVEY +
Sbjct: 119 GAGDQGTMFGYACDETPELMPLPIVLAHRLAKRLDQARKDGLLPGLLPDGKTQVTVEYED 178

Query: 179 ENGAMVPVRVHTVLISTQHDET 200
                 PVRV T+++S QHDE+
Sbjct: 179 G----RPVRVDTIVVSAQHDES 196

Length = 386

>gnl|CDD|201226 pfam00438, S-AdoMet_synt_N, S-adenosylmethionine synthetase, N-terminal domain

 Score =  194 bits (496), Expect = 6e-65
 Identities = 64/100 (64%), Positives = 81/100 (81%)

Query: 2   ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKA 61
             +LFTSESV+EGHPDK+CDQ+SDA+LDA LAQDP+S+VACET   T +V+V GEITT A
Sbjct: 1   SRYLFTSESVSEGHPDKICDQISDAILDAFLAQDPNSRVACETLVTTGLVVVAGEITTSA 60

Query: 62  NVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSP 101
            VD EKIVR+  + IG+ S+++G DAD C VLV+I +QSP
Sbjct: 61  YVDIEKIVREVIKDIGYDSSELGFDADTCAVLVSIHEQSP 100

The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. Length = 100

>gnl|CDD|217221 pfam02772, S-AdoMet_synt_M, S-adenosylmethionine synthetase, central domain

 Score =  165 bits (421), Expect = 3e-53
 Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 4/84 (4%)

Query: 116 EEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVE 175
           +EIGAGDQG MFGYAT+ETPELMPL  VLA +L  +L E+RKNGT P+LRPDGK+QVTVE
Sbjct: 1   DEIGAGDQGIMFGYATNETPELMPLPIVLAHRLLRRLAELRKNGTLPYLRPDGKSQVTVE 60

Query: 176 YYNENGAMVPVRVHTVLISTQHDE 199
           Y +      PVRV TV++STQHD 
Sbjct: 61  YED----GKPVRVDTVVVSTQHDP 80

The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold. Length = 119

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
COG0192	388	MetK S-adenosylmethionine synthetase [Coenzyme met	100.0
PLN02243	386	S-adenosylmethionine synthase	100.0
PRK12459	386	S-adenosylmethionine synthetase; Provisional	100.0
PTZ00104	398	S-adenosylmethionine synthase; Provisional	100.0
PRK05250	384	S-adenosylmethionine synthetase; Validated	100.0
TIGR01034	377	metK S-adenosylmethionine synthetase. Tandem isozy	100.0
KOG1506	383	consensus S-adenosylmethionine synthetase [Coenzym	100.0
PF00438	100	S-AdoMet_synt_N: S-adenosylmethionine synthetase,	100.0
PF02772	120	S-AdoMet_synt_M: S-adenosylmethionine synthetase,	100.0
PF01941	396	AdoMet_Synthase: S-adenosylmethionine synthetase (	97.99
PRK04439	399	S-adenosylmethionine synthetase; Provisional	97.83
COG1812	400	MetK Archaeal S-adenosylmethionine synthetase [Ami	96.2

>COG0192 MetK S-adenosylmethionine synthetase [Coenzyme metabolism]

Probab=100.00  E-value=2.3e-97  Score=670.79  Aligned_cols=194  Identities=62%  Similarity=0.976  Sum_probs=186.1

Q ss_pred             cceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCCC
Q 045358            3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSAD   82 (200)
Q Consensus         3 ~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~~   82 (200)
                      .+|||||||+|||||||||||||||||+||++||+|||||||++++|+|+|+|||+|+++||+++++|++|++|||++++
T Consensus         4 ~~lFTSESVseGHPDKi~DqISDaILD~~L~~Dp~srVAcEt~v~tg~v~i~GEitt~~~vd~~~~~r~~I~~IGY~~~~   83 (388)
T COG0192           4 YFLFTSESVSEGHPDKICDQISDAILDAILKQDPNSRVACETLVTTGLVVIAGEITTSAYVDIVNIARKTIKEIGYTESD   83 (388)
T ss_pred             cceeeeccccCCCChHHHHHHhHHHHHHHHhcCCCceEEEEEEEecCeEEEEEEEecCccccHHHHHHHHHHHhCCCccc
Confidence            46999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q 045358           83 VGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCP  162 (200)
Q Consensus        83 ~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~  162 (200)
                      +|||+++|.|+++|++|||||+|||+...+ ..+++|||||||||||||||||+||||||+|||+|++|++++||+|.+|
T Consensus        84 ~Gfd~~t~~vl~~i~~QSpDIaqgVd~~~~-~~~~~GAGDQGimFGyA~~ET~~lMPlpI~lAH~l~~r~a~~Rk~g~l~  162 (388)
T COG0192          84 YGFDAKTCAVLVAIGEQSPDIAQGVDEADE-ELDEIGAGDQGIMFGYACNETPELMPLPISLAHRLLRRLAEVRKNGELP  162 (388)
T ss_pred             cCcCccceEEEeecccCChhHHHhhhhccc-chhhcCCCcceeEeeeecCCcccccChHHHHHHHHHHHHHHHHhcCCCc
Confidence            999999999999999999999999997532 3457999999999999999999999999999999999999999999999


Q ss_pred             cccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          163 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       163 ~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      |||||+||||||+|+++ +  +|+||+|||+||||+++
T Consensus       163 ~LrpD~KsQVtv~Y~~~-~--~p~~idtIvvStQH~~~  197 (388)
T COG0192         163 WLRPDAKSQVTVEYEDN-G--KPVRIDTIVVSTQHDPD  197 (388)
T ss_pred             ccCCCcceeEEEEEcCC-C--CceeEEEEEEEeccCcc
Confidence            99999999999999863 3  89999999999999874

>PLN02243 S-adenosylmethionine synthase

Probab=100.00  E-value=1.1e-96  Score=671.81  Aligned_cols=200  Identities=94%  Similarity=1.425  Sum_probs=188.1

Q ss_pred             CCcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCC
Q 045358            1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTS   80 (200)
Q Consensus         1 ~~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~   80 (200)
                      |.+||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+++|||+++||++|++|||++
T Consensus         1 ~~~~lfTSESV~eGHPDKicDqISDaILDa~L~qDp~srVA~Et~v~~~~V~i~GEitt~a~vd~~~ivR~~i~~IGY~~   80 (386)
T PLN02243          1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCREIGFVS   80 (386)
T ss_pred             CCceEEEecCCCCCCChHHHHHHHHHHHHHHHhhCCCCcEEEEEEEECCEEEEEEEECCCCcCCHHHHHHHHHHHhCCCC
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC
Q 045358           81 ADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGT  160 (200)
Q Consensus        81 ~~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~  160 (200)
                      +++|||+++|.|++.|++|||||++||+.+.++..+++|||||||||||||||||+||||||+|||||++||+++||+|.
T Consensus        81 ~~~gfd~~t~~v~~~i~~QSpdIa~gV~~~~~~~~~~iGAGDQGimfGYA~~ET~e~MPlpi~lAh~l~~~l~~~Rk~~~  160 (386)
T PLN02243         81 DDVGLDADKCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLTHVLATKLGARLTEVRKNGT  160 (386)
T ss_pred             cccCcCCCceEEEecCCCCChhHhhccccccccccccCCCCcceEEeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999985433223458999999999999999999999999999999999999999999


Q ss_pred             CCcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          161 CPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       161 ~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      +|||||||||||||+|+++.+.++|+||+|||+|+||+++
T Consensus       161 ~~~l~PD~KsQVtv~Y~~~~~~~~p~rv~tivvS~QH~~~  200 (386)
T PLN02243        161 CPWLRPDGKTQVTVEYKNEGGAMVPIRVHTVLISTQHDET  200 (386)
T ss_pred             CCeecCCCceEEEEEeecCCCCccceeEeEEEEeeccCCC
Confidence            9999999999999999764353459999999999999874

>PRK12459 S-adenosylmethionine synthetase; Provisional

Probab=100.00  E-value=1e-95  Score=666.03  Aligned_cols=194  Identities=62%  Similarity=0.989  Sum_probs=183.3

Q ss_pred             CCcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCC
Q 045358            1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTS   80 (200)
Q Consensus         1 ~~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~   80 (200)
                      |++||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||+|+|+|||++|||++|++|||+ 
T Consensus         1 m~~~lfTSESV~eGHPDKicDqISDaILDa~L~qDp~srVA~Et~v~~~~V~v~GEitt~a~vdi~~ivR~~i~~IGY~-   79 (386)
T PRK12459          1 MSTFLFTSESVTEGHPDKLCDQISDAILDACLRQDPASRVACEVLVSTGIVIVAGEITSSAKVDIEKIVRNVIKEIGYD-   79 (386)
T ss_pred             CCceeEEecCCCCCCccHHHhhHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEccCccCCHHHHHHHHHHHhCCC-
Confidence            6779999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             CCCCCCCCceEEEEeecCCChhhhhcccCCCC--CCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHc
Q 045358           81 ADVGLDADHCKVLVNIEQQSPDIAQGVHGHLT--KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKN  158 (200)
Q Consensus        81 ~~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~--~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~  158 (200)
                       ++|||+++|.|+++|++|||||++||+.+.+  +..+++|||||||||||||||||+||||||+|||+|++||+++||+
T Consensus        80 -~~gfd~~t~~v~~~i~~QSpdIa~gV~~~~~~~~~~~~iGAGDQGimfGYA~~ET~~~MPlpi~lAh~l~~~l~~~Rk~  158 (386)
T PRK12459         80 -ELGFDPRTCTVLVSLGEQSPDIAQGVDTAEGRDEELEELGAGDQGTMFGYACDETPELMPLPIVLAHRLAKRLDQARKD  158 (386)
T ss_pred             -CCCCCCCceEEEeccccCChhHhcccccccccccccccCCCCcceEeeeeecCCCcccCChHHHHHHHHHHHHHHHHhc
Confidence             7999999999999999999999999974321  1124689999999999999999999999999999999999999999


Q ss_pred             CCCCcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          159 GTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       159 g~~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      |.+|||||||||||||+|+++    +|+||+|||||+||+++
T Consensus       159 g~~~~l~PD~KsQVtv~Y~~~----~P~rv~tivvS~QH~~~  196 (386)
T PRK12459        159 GLLPGLLPDGKTQVTVEYEDG----RPVRVDTIVVSAQHDES  196 (386)
T ss_pred             CCCCeecCCCceEEEEEeeCC----ceeEEEEEEEeeccCCC
Confidence            999999999999999999753    89999999999999874

>PTZ00104 S-adenosylmethionine synthase; Provisional

Probab=100.00  E-value=3.8e-95  Score=663.81  Aligned_cols=197  Identities=74%  Similarity=1.137  Sum_probs=185.4

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||+|+++|||++|||++|++|||+++
T Consensus         9 ~~~lfTSESVseGHPDKicDqISDaILD~~L~qDp~srVA~Et~v~~~~V~v~GEitt~a~vDi~~ivR~~i~~IGY~~~   88 (398)
T PTZ00104          9 GHFLFTSESVSEGHPDKLCDQISDAVLDACLAQDPLSKVACETCAKTGMVMVFGEITTKAVVDYQKVVRDTVKEIGYDDT   88 (398)
T ss_pred             CCEEEEecCCCCCCCcHHHHHHHHHHHHHHHhcCCCCcEEEEEEEeCCEEEEEEEEcCCccCCHHHHHHHHHHHhCCCCc
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 045358           82 DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTC  161 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~  161 (200)
                      ++|||+++|.|++.|++|||||++||+..  +..+++|||||||||||||||||+||||||+|||+|++||+++||+|.+
T Consensus        89 ~~gfd~~t~~v~~~i~~QSpDIa~gV~~~--~~~~~iGAGDQGimfGYA~~ET~~~MPlpi~lAh~L~~~l~~~Rk~~~~  166 (398)
T PTZ00104         89 EKGLDYKTCNVLVAIEQQSPDIAQGVHVG--KKEEDIGAGDQGIMFGYATDETEELMPLTHELATKLAKRLSELRKNGIL  166 (398)
T ss_pred             ccCcCCCceEEEecCCCCChhHhhccccc--cccccCCCCccceeeeeecCCCcccCCcHHHHHHHHHHHHHHHHhcCCC
Confidence            99999999999999999999999999843  1124589999999999999999999999999999999999999999999


Q ss_pred             CcccCCccceEEEEEecCC-CeeeeeEEeEEEEeeeeCCC
Q 045358          162 PWLRPDGKTQVTVEYYNEN-GAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       162 ~~lrPD~KsQVtv~Y~~~~-~~~~p~rv~tiviS~QH~~~  200 (200)
                      |||||||||||||+|+++. +.|+|+||+|||+|+||+++
T Consensus       167 ~~L~PD~KsQVtv~Y~~~~~~~~~P~~i~tivvS~QH~~~  206 (398)
T PTZ00104        167 PWLRPDAKTQVTVEYEYDTRGGLTPKRVHTILISTQHDEG  206 (398)
T ss_pred             CeeccCCceEEEEEeccCCCCCccceeEEEEEEccccCCC
Confidence            9999999999999997531 12589999999999999874

>PRK05250 S-adenosylmethionine synthetase; Validated

Probab=100.00  E-value=6.4e-95  Score=660.46  Aligned_cols=191  Identities=63%  Similarity=0.983  Sum_probs=183.7

Q ss_pred             cceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCCC
Q 045358            3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSAD   82 (200)
Q Consensus         3 ~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~~   82 (200)
                      +||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||+|+++||++++||++|++|||++++
T Consensus         2 ~~lfTSESV~eGHPDKicDqISDaILD~~L~~Dp~srVA~Et~v~~~~V~i~GEitt~a~vD~~~ivR~~i~~IGY~~~~   81 (384)
T PRK05250          2 RYLFTSESVSEGHPDKIADQISDAILDAILAQDPNARVACETLVTTGLVVVAGEITTSAYVDIEEIVRETIKEIGYTSSE   81 (384)
T ss_pred             CceEeecCCCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEeCCccCCHHHHHHHHHHHcCCCCcc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q 045358           83 VGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCP  162 (200)
Q Consensus        83 ~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~  162 (200)
                      +|||+++|.|+++|++|||||+|||+..   ..+++|||||||||||||||||+||||||+|||+|++||+++||+|.+|
T Consensus        82 ~gfd~~~~~v~~~i~~QSpdIa~gV~~~---~~~~~GAGDQGimfGYA~~ET~~~MPl~i~lAh~l~~~l~~~Rk~~~~~  158 (384)
T PRK05250         82 YGFDANTCAVLVSIGEQSPDIAQGVDRD---ELDEIGAGDQGIMFGYACNETPELMPLPITLAHRLVRRLAEVRKSGTLP  158 (384)
T ss_pred             cCcCCCceEEEeecCCCChhHHhhhCcc---ccccCCCCCceeeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999999999852   2346899999999999999999999999999999999999999999999


Q ss_pred             cccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          163 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       163 ~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      ||||||||||||+|+++    +|+||++||||+||+++
T Consensus       159 ~l~PD~KtQVtv~Y~~~----~p~~i~tiviS~QH~~~  192 (384)
T PRK05250        159 YLRPDAKSQVTVEYENG----KPVRIDTIVVSTQHDPD  192 (384)
T ss_pred             eecCCCceEEEEEEECC----ceeeEEEEEEeccCCCC
Confidence            99999999999999753    79999999999999974

>TIGR01034 metK S-adenosylmethionine synthetase

Probab=100.00  E-value=7.6e-95  Score=658.26  Aligned_cols=189  Identities=64%  Similarity=0.982  Sum_probs=181.6

Q ss_pred             eeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCCCCC
Q 045358            5 LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSADVG   84 (200)
Q Consensus         5 lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~~~g   84 (200)
                      |||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+++|||+++||++|++|||+++++|
T Consensus         1 lfTSESV~eGHPDKicDqISDaILD~~L~~Dp~srVA~Et~v~~~~V~i~GEitt~~~vd~~~ivR~~i~~IGY~~~~~g   80 (377)
T TIGR01034         1 LFTSESVSEGHPDKIADQISDAVLDAILKQDPKAKVACETFVKTGLVLIGGEITTSAYVDIQEVARNTIKDIGYTDSDYG   80 (377)
T ss_pred             CCccCcCCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEcCCccCCHHHHHHHHHHHhCCCCcccC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCcc
Q 045358           85 LDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWL  164 (200)
Q Consensus        85 fd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~~l  164 (200)
                      ||+++|.|+++|++|||||+|||+++.   .+++||||||||||||||||||||||||+|||+|++||+++||+|.+|||
T Consensus        81 fd~~t~~v~~~i~~QSpDIa~gV~~~~---~~~iGAGDQGimfGYA~~ET~e~MPl~i~lAh~l~~~l~~~Rk~g~~~~l  157 (377)
T TIGR01034        81 FDAKTCAVLVAIGNQSPDIAQGVDKAN---PEEQGAGDQGIMFGYATNETPELMPLPITLAHKLLKRAAELRKSGTLPWL  157 (377)
T ss_pred             CCCCceEEEecCCCCChHHHhccccCc---cccCCCCcceeeeeeecCCCcccCChHHHHHHHHHHHHHHHHhcCCCCee
Confidence            999999999999999999999998431   23589999999999999999999999999999999999999999999999


Q ss_pred             cCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          165 RPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       165 rPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      ||||||||||+|+++    +|+||+|||||+||+++
T Consensus       158 ~PD~KtQVtveY~~~----~P~rv~tivvS~QH~~~  189 (377)
T TIGR01034       158 RPDGKSQVTVQYEDN----KPVRVDTIVLSTQHDPD  189 (377)
T ss_pred             cCCCceEEEEEEECC----ceeEEEEEEEecCCCCC
Confidence            999999999999753    79999999999999874

Tandem isozymes of this S-adenosylmethionine synthetase in E. coli are designated MetK and MetX.

>KOG1506 consensus S-adenosylmethionine synthetase [Coenzyme transport and metabolism]

Probab=100.00  E-value=4.6e-95  Score=643.47  Aligned_cols=198  Identities=72%  Similarity=1.113  Sum_probs=192.5

Q ss_pred             CCcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCC
Q 045358            1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTS   80 (200)
Q Consensus         1 ~~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~   80 (200)
                      +.+||||||||+||||||+|||||||||||||+|||+|+|||||..++|||+++|||||+|.|||+++||++++.|||++
T Consensus         3 ~~tFLFTSESVgEGHPDKmCDQISDAiLDAhLkqDP~aKVACETv~KTgMiml~GEITska~vDYqkvVR~tik~IGydd   82 (383)
T KOG1506|consen    3 METFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVTKTGMIMLCGEITSKAVVDYQKVVRDTIKKIGYDD   82 (383)
T ss_pred             CceeEEeeccccCCCchHHHHHHHHHHHHHHhhcCCCceeeeeeccccceEEEeeeccchhhhhHHHHHHHHHHHhCCcc
Confidence            35799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC
Q 045358           81 ADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGT  160 (200)
Q Consensus        81 ~~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~  160 (200)
                      +..|||++||+|+++|++|||||||||+-  ++..+++||||||+|||||||||||+|||++.|||||..+|+++||+|.
T Consensus        83 sskGfD~ktcnvLvaieQQSPdIAqgvH~--~k~~edvGAGDQgimfGYATdet~e~mplt~~lahkln~~l~~~rr~g~  160 (383)
T KOG1506|consen   83 SSKGFDYKTCNVLVAIEQQSPDIAQGVHV--DKDEEDVGAGDQGIMFGYATDETPECMPLTIVLAHKLNAKLAELRRNGT  160 (383)
T ss_pred             cccCccccccceeeeecccCchhhhcccc--cCCHhHcCCCcceeEeeeecCCCccccchHHHHHHHHHHHHHhhcccCc
Confidence            99999999999999999999999999994  4566789999999999999999999999999999999999999999999


Q ss_pred             CCcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          161 CPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       161 ~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      +||||||+|+|||++|.+++|++.|.||||||||+||+++
T Consensus       161 l~WlRpdsktqVTvey~~~~Ga~vP~rVhtvviS~QH~~~  200 (383)
T KOG1506|consen  161 LPWLRPDSKTQVTVEYMNDNGAMVPLRVHTVVISTQHSED  200 (383)
T ss_pred             ccccccCCcceEEEEEecCCCceeeeEEEEEEEecccCcc
Confidence            9999999999999999999999999999999999999874

>PF00438 S-AdoMet_synt_N: S-adenosylmethionine synthetase, N-terminal domain; InterPro: IPR022628 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold

Probab=100.00  E-value=1.2e-53  Score=328.98  Aligned_cols=100  Identities=60%  Similarity=1.044  Sum_probs=93.2

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||++||||||||||||||||+||++||+|||||||++++|+|+|+|||++++++||+++||++|++|||+++
T Consensus         1 ~~~lfTSESV~~GHPDKicDqISDailD~~l~~dp~arVA~E~~~~~~~v~i~GEi~~~~~vd~~~ivR~~i~~IGY~~~   80 (100)
T PF00438_consen    1 KKYLFTSESVSEGHPDKICDQISDAILDACLKQDPNARVACETLVSTGMVIIAGEITSRAYVDIEKIVREVIKDIGYDDS   80 (100)
T ss_dssp             -EEEEEEEEE-TTSHHHHHHHHHHHHHHHHHHH-TT-EEEEEEEEETTEEEEEEEEESSHHHTHHHHHHHHHHHHT-EEG
T ss_pred             CceEEeeccccCCCchhhhceeeeccchHHHhcCCCCeEEEEEEeeccEEEEEEEeccchhhhHHHHHHHHHHHhCCCCc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCCh
Q 045358           82 DVGLDADHCKVLVNIEQQSP  101 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~  101 (200)
                      ++|||+++|+|+++|++|||
T Consensus        81 ~~gfd~~tc~V~~~i~~QSp  100 (100)
T PF00438_consen   81 EYGFDYDTCEVLVAIHEQSP  100 (100)
T ss_dssp             GGTEETTTSEEEEEEEEE-H
T ss_pred             cCCCCCCcceEEEeecccCc
Confidence            99999999999999999998

This entry represents the N-terminal domain of S-adenosylmethionine synthetase and is found in association with PF02772 from PFAM and PF02773 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3RV2_A 3TDE_B 3S82_B 3IML_B 2P02_A 2OBV_A 1QM4_B 1O9T_B 1O93_A 1O92_B ....

>PF02772 S-AdoMet_synt_M: S-adenosylmethionine synthetase, central domain; InterPro: IPR022629 The three domains of S-adenosylmethionine synthetase have the same alpha+beta fold

Probab=100.00  E-value=7e-48  Score=305.33  Aligned_cols=81  Identities=72%  Similarity=1.162  Sum_probs=74.4

Q ss_pred             CCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCcccCCccceEEEEEecCCCeeeeeEEeEEEEeee
Q 045358          117 EIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQ  196 (200)
Q Consensus       117 ~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~Q  196 (200)
                      ++|||||||||||||||||+||||||+|||+|++||+++|++|.+|||||||||||||+|+++ +  +|+||+|||||+|
T Consensus         2 ~~GAGDQGimfGYA~~ET~~~MPl~i~lAh~L~~~l~~~R~~~~~~~l~PD~KsQVtveY~~~-~--~P~ri~tivvS~Q   78 (120)
T PF02772_consen    2 EIGAGDQGIMFGYACDETPELMPLPIVLAHRLARRLAEVRKNGELPWLRPDGKSQVTVEYDEN-G--KPVRIDTIVVSTQ   78 (120)
T ss_dssp             CCSBSS-EEEEEEEETTSTTSS-HHHHHHHHHHHHHHHHHHTSSSTTEEEEEEEEEEEEEEET-T--EEEEEEEEEEEEE
T ss_pred             CcCcCcceEEEeeEcCCCCccCChHHHHHHHHHHHHHHHHhcccCcccCCCcceeEEEeeccC-C--ceeeeeEEEEEec
Confidence            689999999999999999999999999999999999999999999999999999999999654 3  8999999999999


Q ss_pred             eCCC
Q 045358          197 HDET  200 (200)
Q Consensus       197 H~~~  200 (200)
                      |+++
T Consensus        79 H~~~   82 (120)
T PF02772_consen   79 HDED   82 (120)
T ss_dssp             E-TT
T ss_pred             CCCC
Confidence            9874

This entry represents the central domain and is found in association with PF00438 from PFAM and PF02773 from PFAM. S-adenosylmethionine synthetase (MAT, 2.5.1.6 from EC) is the enzyme that catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP []. AdoMet is an important methyl donor for transmethylation and is also the propylamino donor in polyamine biosynthesis. In bacteria there is a single isoform of AdoMet synthetase (gene metK), there are two in budding yeast (genes SAM1 and SAM2) and in mammals while in plants there is generally a multigene family. The sequence of AdoMet synthetase is highly conserved throughout isozymes and species. The active sites of both the Escherichia coli and rat liver MAT reside between two subunits, with contributions from side chains of residues from both subunits, resulting in a dimer as the minimal catalytic entity. The side chains that contribute to the ligand binding sites are conserved between the two proteins. In the structures of complexes with the E. coli enzyme, the phosphate groups have the same positions in the (PPi plus Pi) complex and the (ADP plus Pi) complex, and are located at the bottom of a deep cavity with the adenosyl group nearer the entrance []; GO: 0004478 methionine adenosyltransferase activity; PDB: 3S82_B 2OBV_A 3RV2_A 1FUG_A 1RG9_D 1XRA_A 1P7L_C 1XRB_A 1MXA_A 1MXB_A ....

>PF01941 AdoMet_Synthase: S-adenosylmethionine synthetase (AdoMet synthetase); InterPro: IPR002795 A highly diverged class of S-adenosylmethionine synthetases have been identified in the archaea

Probab=97.99  E-value=6.7e-05  Score=70.32  Aligned_cols=145  Identities=23%  Similarity=0.273  Sum_probs=96.0

Q ss_pred             CCCCCcchhhhhhHHHHHHH----hhc---------CCCCeEEEEEEeee--------CeEEEEEEEeece---eccHHH
Q 045358           12 NEGHPDKLCDQVSDAVLDAC----LAQ---------DPDSKVACETCTKT--------NMVMVFGEITTKA---NVDYEK   67 (200)
Q Consensus        12 ~eGHPDKicDqISDaILDa~----L~~---------Dp~arVA~E~~v~~--------~~V~v~GEitt~a---~vD~~~   67 (200)
                      +-||||-|||-|++++=-++    |++         |+-.-||-+..-+-        =.++++|..|+..   .+.+.+
T Consensus        26 GiGHPDtIcD~iaE~vS~~Ls~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAt~~~~~~~iPv~~  105 (396)
T PF01941_consen   26 GIGHPDTICDGIAEAVSRALSRYYLERFGAILHHNTDKVLLVGGRSEPKFGGGEVIEPIYIILGGRATKEVGGEKIPVDE  105 (396)
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEccEEeccCCCceeeeeEEEEEecceeeccCCeeccHHH
Confidence            67999999999999875442    222         77777777765442        2488999988764   678888


Q ss_pred             HHHHHHHhcCCCCCCCCCCCC-ceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHH
Q 045358           68 IVRDTCRSIGFTSADVGLDAD-HCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLAT  146 (200)
Q Consensus        68 ivR~~i~~IGY~~~~~gfd~~-~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh  146 (200)
                      |+.++.|+- ....--.||.+ ...|...+.+-|+|+..-..+.    ..-.+|-|-.+..|||-        |  .-.-
T Consensus       106 Ia~~aak~~-l~~~l~~lD~e~hv~i~~~i~~GS~dL~dvf~r~----~~vp~ANDTS~gVGyAP--------l--S~~E  170 (396)
T PF01941_consen  106 IAIEAAKEW-LRENLRFLDPERHVIIDCRIGPGSPDLVDVFERG----KKVPLANDTSFGVGYAP--------L--SETE  170 (396)
T ss_pred             HHHHHHHHH-HHHhcccCCccccEEEEEeeCCCChHHHHHhccc----ccccccCCccceeccCC--------c--cHHH
Confidence            866665541 11112345655 4788888999999998765532    11358999999999983        3  2233


Q ss_pred             HHHHHHHHHHHc----CCCCcccCCccce
Q 045358          147 KLGAKLTEVRKN----GTCPWLRPDGKTQ  171 (200)
Q Consensus       147 ~L~~rl~~~Rk~----g~~~~lrPD~KsQ  171 (200)
                      +|+..++..-.+    ..+||.+.|-|.-
T Consensus       171 ~~Vl~~Er~lns~~fk~~~p~~GeDiKVM  199 (396)
T PF01941_consen  171 KLVLETERYLNSPEFKKKFPEVGEDIKVM  199 (396)
T ss_pred             HHHHHHHHHhccccccccCCCcCCCeEEE
Confidence            333343333221    3589999999973

S-adenosylmethionine is the primary alkylating agent in all known organisms. ATP:L-methionine S-adenosyltransferase (MAT) catalyses the only known biosynthetic route to this central metabolite. Although the amino acid sequence of MAT is strongly conserved among bacteria and eukarya (see IPR002133 from INTERPRO) no homologues had been recognised in the completed genome sequences of any archaea. The identification of a second major class of MAT emphasises the long evolutionary history of the archaeal lineage and the structural diversity found even in crucial metabolic enzymes []. Three bacterial genomes encode both the archaeal and eukaryotic/bacterial types of MAT [].; GO: 0004478 methionine adenosyltransferase activity, 0005524 ATP binding, 0006730 one-carbon metabolic process

>PRK04439 S-adenosylmethionine synthetase; Provisional

Probab=97.83  E-value=0.00017  Score=67.74  Aligned_cols=145  Identities=22%  Similarity=0.277  Sum_probs=93.1

Q ss_pred             CCCCCcchhhhhhHHHHHH----Hhhc---------CCCCeEEEEEEeee--C------eEEEEEEEeece---eccHHH
Q 045358           12 NEGHPDKLCDQVSDAVLDA----CLAQ---------DPDSKVACETCTKT--N------MVMVFGEITTKA---NVDYEK   67 (200)
Q Consensus        12 ~eGHPDKicDqISDaILDa----~L~~---------Dp~arVA~E~~v~~--~------~V~v~GEitt~a---~vD~~~   67 (200)
                      +-||||-|||-|++++=-+    ||++         |+-.-||-+..-+-  |      .++++|..|+..   .+.+.+
T Consensus        26 GiGHPDticD~iaE~~S~~Ls~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAt~~~~g~~iPv~~  105 (399)
T PRK04439         26 GIGHPDTICDGIAEAVSRALSRYYLEKFGAILHHNTDKVLLVGGRSAPKFGGGEVIEPIYIILGGRATKEVGGEEIPVGE  105 (399)
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEccEEeccCCCceEEeeEEEEEecceeeeECCeEecHHH
Confidence            6799999999999987544    3332         77777777765442  2      357899888754   378888


Q ss_pred             HHHHHHHhcCCCCCCCCCCCCc-eEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHH
Q 045358           68 IVRDTCRSIGFTSADVGLDADH-CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLAT  146 (200)
Q Consensus        68 ivR~~i~~IGY~~~~~gfd~~~-~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh  146 (200)
                      |+.++.|+- ....--.||.+. ..|...|.+-|+|+..-..+.    ..-.+|-|-.+..|||-        |+  ---
T Consensus       106 Ia~~Aak~~-L~~~l~~lD~e~hv~i~~~i~~GS~dL~~vF~r~----~~vp~ANDTS~gVGyAP--------lS--~~E  170 (399)
T PRK04439        106 IAIEAAKEY-LRENLRNLDPERHVIIDVRLGPGSTDLVDVFERE----SIVPLANDTSFGVGYAP--------LS--ETE  170 (399)
T ss_pred             HHHHHHHHH-HHHhCccCCccccEEEEEeeCCCcHHHHHHhCCC----CCccccccccceeecCC--------CC--HHH
Confidence            875555441 111122355543 677888999999998654421    11358999999999983        32  223


Q ss_pred             HHHHHHHHHHHc----CCCCcccCCccce
Q 045358          147 KLGAKLTEVRKN----GTCPWLRPDGKTQ  171 (200)
Q Consensus       147 ~L~~rl~~~Rk~----g~~~~lrPD~KsQ  171 (200)
                      +|+..++..-.+    ..+||.+.|-|.-
T Consensus       171 ~~Vl~~E~~lns~~~k~~~P~~GeDiKVM  199 (399)
T PRK04439        171 RLVLETERYLNSEEFKKRFPEVGEDIKVM  199 (399)
T ss_pred             HHHHHHHHHhcCcchhhcCCCcCCCeEEE
Confidence            333333333221    3689999999973

>COG1812 MetK Archaeal S-adenosylmethionine synthetase [Amino acid transport and metabolism]

Probab=96.20  E-value=0.039  Score=51.76  Aligned_cols=146  Identities=23%  Similarity=0.283  Sum_probs=83.7

Q ss_pred             CCCCCCcchhhhhhHHHHHHH----hhc---------CCCCeEEEEE--------EeeeCeEEEEEEEeec---eeccHH
Q 045358           11 VNEGHPDKLCDQVSDAVLDAC----LAQ---------DPDSKVACET--------CTKTNMVMVFGEITTK---ANVDYE   66 (200)
Q Consensus        11 V~eGHPDKicDqISDaILDa~----L~~---------Dp~arVA~E~--------~v~~~~V~v~GEitt~---a~vD~~   66 (200)
                      =+-||||-|||-|+.+|=-++    |+.         |.---||-+.        ++..=.+++.|.-|..   ..+++.
T Consensus        25 KGlGHPDsiaDgiAE~vsr~Ls~~YlerfG~IlHHN~Dk~~ivgG~s~p~FGGGevi~PIyIll~GRAt~~~~g~~ip~~  104 (400)
T COG1812          25 KGLGHPDSIADGIAEAVSRALSKYYLERFGVILHHNTDKVQIVGGQSAPKFGGGEVIEPIYILLSGRATKEVEGVEIPVG  104 (400)
T ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHHhCceeccccceeEEEcccccccCCCcceeeeEEEEEecceeeeecCeeccch
Confidence            367999999999988875443    222         3333333332        1222246777776643   346666


Q ss_pred             HHHHHHHHhcCCCC-CCCCCCCCc-eEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHH
Q 045358           67 KIVRDTCRSIGFTS-ADVGLDADH-CKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVL  144 (200)
Q Consensus        67 ~ivR~~i~~IGY~~-~~~gfd~~~-~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~l  144 (200)
                      .|+-++.|+  |=. .---+|.++ +-+-..|.+-|.|+..-..+..   ..-..|-|-..+.|||        ||+.  
T Consensus       105 ~ia~~AAk~--yLr~~~r~LD~E~~Viid~rig~GS~dL~dvf~~~~---~~VplANDTSfgVG~A--------PLs~--  169 (400)
T COG1812         105 SIAIKAAKE--YLRENLRNLDVENHVIIDVRIGQGSVDLVDVFERAK---EEVPLANDTSFGVGFA--------PLSE--  169 (400)
T ss_pred             HHHHHHHHH--HHHhhcccCCccccEEEEeeccCCchhHHHHHhhcc---cCCcccccccceeccC--------CCcH--
Confidence            665444443  111 112356664 4566778888999875444321   1235899999999998        3332  


Q ss_pred             HHHHHHH----HHHHHHcCCCCcccCCccce
Q 045358          145 ATKLGAK----LTEVRKNGTCPWLRPDGKTQ  171 (200)
Q Consensus       145 Ah~L~~r----l~~~Rk~g~~~~lrPD~KsQ  171 (200)
                      ..+|+..    |...--...+|..+.|-|.-
T Consensus       170 tErlV~etEr~lns~~~k~~~P~vGeDIKVM  200 (400)
T COG1812         170 TERLVLETERYLNSPEFKKKLPAVGEDIKVM  200 (400)
T ss_pred             HHHHHHHHHHHhcChhhcccCCCcCCceEEE
Confidence            2333332    22222224689999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	200
2p02_A	396	Crystal Structure Of The Alpha Subunit Of Human S-		2e-75
2obv_A	384	Crystal Structure Of The Human S-adenosylmethionine		5e-71
1qm4_A	396	Methionine Adenosyltransferase Complexed With A L-M		5e-70
3so4_A	415	Methionine-Adenosyltransferase From Entamoeba Histo		8e-68
1fug_A	383	S-adenosylmethionine Synthetase Length = 383		3e-57
3rv2_A	407	Crystal Structure Of S-Adenosylmethionine Synthetas		4e-55
1xrb_A	383	S-adenosylmethionine Synthetase (mat, Atp: L-methio		1e-54
3iml_A	399	Crystal Structure Of S-Adenosylmethionine Synthetas		1e-54
3s82_A	407	Structure Of A S-Adenosylmethionine Synthetase From		1e-54
3tde_A	408	Crystal Structure Of S-Adenosylmethionine Synthetas		8e-54

>pdb|2P02|A Chain A, Crystal Structure Of The Alpha Subunit Of Human S- Adenosylmethionine Synthetase 2 Length = 396

Iteration: 1
 Score =  278 bits (710), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 131/197 (66%), Positives = 158/197 (80%), Gaps = 2/197 (1%)
Query: 3   TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
           TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A 
Sbjct: 18  TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAA 77
Query: 63  VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGD 122
           VDY+K+VR+  + IG+  +  G D   C VLV +EQQSPDIAQGV  HL +  E+IGAGD
Sbjct: 78  VDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGD 135
Query: 123 QGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGA 182
           QG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+Y  + GA
Sbjct: 136 QGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGA 195
Query: 183 MVPVRVHTVLISTQHDE 199
           ++P+RVHT++IS QHDE
Sbjct: 196 VLPIRVHTIVISVQHDE 212

>pdb|2OBV|A Chain A, Crystal Structure Of The Human S-adenosylmethionine Synthetase 1 In Complex With The Product Length = 384

Iteration: 1
 Score =  263 bits (672), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 123/199 (61%), Positives = 157/199 (78%), Gaps = 2/199 (1%)
Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
           M  F+FTSESV EGHPDK+CDQ+SDAVLDA L QDP++KVACET  KT MV++ GEIT+ 
Sbjct: 4   MGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSM 63
Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDY+++VRDT + IG+  +  G D   C VLV +EQQSPDIAQ V  HL +  E++GA
Sbjct: 64  AMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGA 121
Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQG MFGYATDET E MPL+ +LA KL A++ ++R++G  PWLRPD KTQVTV+Y  +N
Sbjct: 122 GDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDN 181
Query: 181 GAMVPVRVHTVLISTQHDE 199
           GA++PVR+HT++IS QH+E
Sbjct: 182 GAVIPVRIHTIVISVQHNE 200

>pdb|1QM4|A Chain A, Methionine Adenosyltransferase Complexed With A L-Methionine Analogous Length = 396

Iteration: 1
 Score =  259 bits (663), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
Query: 4   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANV 63
           F+FTSESV EGHPDK+CDQ+SDAVLDA L QDP++KVACET  KT MV++ GEIT+ A +
Sbjct: 19  FMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMI 78
Query: 64  DYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQ 123
           DY+++VRDT + IG+  +  G D   C VLV +EQQSPDIAQ V  HL +  E++GAGDQ
Sbjct: 79  DYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCV--HLDRNEEDVGAGDQ 136
Query: 124 GHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAM 183
           G MFGYATDET E MPL+ VLA KL  ++ ++R++G  PWLRPD KTQVTV+Y  +NGA+
Sbjct: 137 GLMFGYATDETEECMPLTIVLAHKLNTRMADLRRSGVLPWLRPDSKTQVTVQYVQDNGAV 196
Query: 184 VPVRVHTVLISTQHDE 199
           +PVRVHT++IS QH+E
Sbjct: 197 IPVRVHTIVISVQHNE 212

>pdb|3SO4|A Chain A, Methionine-Adenosyltransferase From Entamoeba Histolytica Length = 415

Iteration: 1
 Score =  252 bits (644), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 120/194 (61%), Positives = 148/194 (76%), Gaps = 2/194 (1%)
Query: 4   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANV 63
           F FTSESV+ GHPDK+CDQ+SDA+LDACLAQDP S VACET TKT +++V GEITT A +
Sbjct: 23  FFFTSESVSGGHPDKMCDQISDAILDACLAQDPKSHVACETATKTGLILVLGEITTNAVI 82
Query: 64  DYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQ 123
           D  KIVR   +SIG+   + G D   C VL  +EQQS DIA+GV  H+ K+ E+IGAGDQ
Sbjct: 83  DIPKIVRGVVKSIGYDDTNKGFDYQTCSVLSCVEQQSQDIAKGV--HVEKKEEDIGAGDQ 140
Query: 124 GHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAM 183
           G MFGYATDE+ E+MPL+HVL+TKL  +L E R+ G  PWLRPD K+QVT+EY    G +
Sbjct: 141 GIMFGYATDESKEMMPLTHVLSTKLILRLQECREKGILPWLRPDSKSQVTLEYEEVEGHL 200
Query: 184 VPVRVHTVLISTQH 197
            P+RVHT++ISTQH
Sbjct: 201 KPIRVHTIVISTQH 214

>pdb|1FUG|A Chain A, S-adenosylmethionine Synthetase Length = 383

Iteration: 1
 Score =  218 bits (554), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/195 (58%), Positives = 138/195 (70%), Gaps = 7/195 (3%)
Query: 5   LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVD 64
           LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MV+V GEITT A VD
Sbjct: 4   LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVD 63
Query: 65  YEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124
            E+I R+T R IG+  +D+G DA+ C VL  I +QSPDI QGV       P E GAGDQG
Sbjct: 64  IEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQG 120
Query: 125 HMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMV 184
            MFGYAT+ET  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G + 
Sbjct: 121 LMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKI- 177
Query: 185 PVRVHTVLISTQHDE 199
            V +  V++STQH E
Sbjct: 178 -VGIDAVVLSTQHSE 191

>pdb|3RV2|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From Mycobacterium Marinum Length = 407

Iteration: 1
 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 115/203 (56%), Positives = 132/203 (65%), Gaps = 14/203 (6%)
Query: 5   LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN-- 62
           LFTSESV EGHPDK+CD VSD+VLDA LA DP S+VA ET   T  V V GE+TT A   
Sbjct: 11  LFTSESVTEGHPDKICDAVSDSVLDALLAADPRSRVAVETLVTTGQVHVVGEVTTTAKEA 70
Query: 63  -VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEI--- 118
             D   IVR+    IG+ S+D G D   C V + I  QSPDIAQGV      R E     
Sbjct: 71  FADITNIVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHEARVEGAADP 130
Query: 119 ----GAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTV 174
               GAGDQG MFGYA ++TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+
Sbjct: 131 LDAQGAGDQGLMFGYAINDTPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTI 190
Query: 175 EYYNENGAMVPVRVHTVLISTQH 197
            Y +     VPVR+ TV+ISTQH
Sbjct: 191 AYEDR----VPVRLDTVVISTQH 209

>pdb|1XRB|A Chain A, S-adenosylmethionine Synthetase (mat, Atp: L-methionine S- Adenosyltransferase, E.c.2.5.1.6) In Which Met Residues Are Replaced With Selenomethionine Residues (mse) Length = 383

Iteration: 1
 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/195 (56%), Positives = 134/195 (68%), Gaps = 7/195 (3%)
Query: 5   LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVD 64
           LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT  V+V GEITT A VD
Sbjct: 4   LFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGXVLVGGEITTSAWVD 63
Query: 65  YEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQG 124
            E+I R+T R IG+  +D G DA+ C VL  I +QSPDI QGV       P E GAGDQG
Sbjct: 64  IEEITRNTVREIGYVHSDXGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQG 120
Query: 125 HMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMV 184
             FGYAT+ET  L P     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G + 
Sbjct: 121 LXFGYATNETDVLXPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDGKI- 177
Query: 185 PVRVHTVLISTQHDE 199
            V +  V++STQH E
Sbjct: 178 -VGIDAVVLSTQHSE 191

>pdb|3IML|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase From Burkholderia Pseudomallei Length = 399

Iteration: 1
 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 106/194 (54%), Positives = 136/194 (70%), Gaps = 5/194 (2%)
Query: 4   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANV 63
           +LFTSESV+EGHPDK+ DQ+SDA+LDA LAQD  S+VA ET   T +V++ GEITT AN+
Sbjct: 9   YLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANI 68
Query: 64  DYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQ 123
           DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQ
Sbjct: 69  DYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVDRAHDNNLDQ-GAGDQ 127
Query: 124 GHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAM 183
           G MFGYA DETPELMPL   L+ +L  +   +R++G  PWLRPD K+QVTV Y +     
Sbjct: 128 GLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK--- 184
Query: 184 VPVRVHTVLISTQH 197
            P  + TV++STQH
Sbjct: 185 -PHSIDTVVLSTQH 197

>pdb|3S82|A Chain A, Structure Of A S-Adenosylmethionine Synthetase From Mycobacterium Avium Length = 407

Iteration: 1
 Score =  208 bits (530), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 113/203 (55%), Positives = 133/203 (65%), Gaps = 14/203 (6%)
Query: 5   LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN-- 62
           LFTSESV EGHPDK+CD +SD+VLDA LAQDP S+VA ET   T  V V GE+TT A   
Sbjct: 11  LFTSESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEA 70
Query: 63  -VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEI--- 118
             D    VR+    IG+ S+D G D   C V + I  QSPDIAQGV      R E     
Sbjct: 71  FADITNTVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEGAADP 130
Query: 119 ----GAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTV 174
               GAGDQG MFGYA ++TPE MPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+
Sbjct: 131 LDAQGAGDQGLMFGYAINDTPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTI 190
Query: 175 EYYNENGAMVPVRVHTVLISTQH 197
           E+ ++    VPVR+ TV+ISTQH
Sbjct: 191 EFEDD----VPVRLDTVVISTQH 209

>pdb|3TDE|A Chain A, Crystal Structure Of S-Adenosylmethionine Synthetase Rv1392 From Mycobacterium Tuberculosis Length = 408

Iteration: 1
 Score =  206 bits (523), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 113/203 (55%), Positives = 129/203 (63%), Gaps = 14/203 (6%)
Query: 5   LFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN-- 62
           LFTSESV EGHPDK+CD +SD+VLDA LA DP S+VA ET   T  V V GE+TT A   
Sbjct: 12  LFTSESVTEGHPDKICDAISDSVLDALLAADPRSRVAVETLVTTGQVHVVGEVTTSAKEA 71
Query: 63  -VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEI--- 118
             D    VR     IG+ S+D G D   C V + I  QSPDIAQGV      R E     
Sbjct: 72  FADITNTVRARILEIGYDSSDKGFDGATCGVNIGIGAQSPDIAQGVDTAHEARVEGAADP 131
Query: 119 ----GAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTV 174
               GAGDQG MFGYA + TPELMPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+
Sbjct: 132 LDSQGAGDQGLMFGYAINATPELMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTI 191
Query: 175 EYYNENGAMVPVRVHTVLISTQH 197
            Y +     VPVR+ TV+ISTQH
Sbjct: 192 AYEDN----VPVRLDTVVISTQH 210

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	200
2p02_A	396	S-adenosylmethionine synthetase isoform type-2; st	1e-143
3so4_A	415	Methionine-adenosyltransferase; structural genomic	1e-143
3iml_A	399	S-adenosylmethionine synthetase; structural genomi	1e-136
3s82_A	407	S-adenosylmethionine synthase; seattle structural	1e-132
1p7l_A	383	S-adenosylmethionine synthetase; AMPPNP, SAM, tran	1e-130

>2p02_A S-adenosylmethionine synthetase isoform type-2; structural genomics, structural genomics consortium, SGC, transferase; HET: SAM; 1.21A {Homo sapiens} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1qm4_A 1o92_A* 1o93_A* 1o90_A* 1o9t_A 2obv_A* Length = 396

 Score =  403 bits (1038), Expect = e-143
 Identities = 131/199 (65%), Positives = 158/199 (79%), Gaps = 2/199 (1%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
             TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++
Sbjct: 16  EGTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSR 75

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A VDY+K+VR+  + IG+  +  G D   C VLV +EQQSPDIAQGV  HL +  E+IGA
Sbjct: 76  AAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGA 133

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+Y  + 
Sbjct: 134 GDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDR 193

Query: 181 GAMVPVRVHTVLISTQHDE 199
           GA++P+RVHT++IS QHDE
Sbjct: 194 GAVLPIRVHTIVISVQHDE 212

>3so4_A Methionine-adenosyltransferase; structural genomics, medical structural genomics of pathogen protozoa, MSGPP; 3.18A {Entamoeba histolytica} Length = 415

 Score =  403 bits (1037), Expect = e-143
 Identities = 120/199 (60%), Positives = 148/199 (74%), Gaps = 2/199 (1%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
              F FTSESV+ GHPDK+CDQ+SDA+LDACLAQDP S VACET TKT +++V GEITT 
Sbjct: 20  GSRFFFTSESVSGGHPDKMCDQISDAILDACLAQDPKSHVACETATKTGLILVLGEITTN 79

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           A +D  KIVR   +SIG+   + G D   C VL  +EQQS DIA+GVH    K+ E+IGA
Sbjct: 80  AVIDIPKIVRGVVKSIGYDDTNKGFDYQTCSVLSCVEQQSQDIAKGVHVE--KKEEDIGA 137

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQG MFGYATDE+ E+MPL+HVL+TKL  +L E R+ G  PWLRPD K+QVT+EY    
Sbjct: 138 GDQGIMFGYATDESKEMMPLTHVLSTKLILRLQECREKGILPWLRPDSKSQVTLEYEEVE 197

Query: 181 GAMVPVRVHTVLISTQHDE 199
           G + P+RVHT++ISTQH +
Sbjct: 198 GHLKPIRVHTIVISTQHAD 216

>3iml_A S-adenosylmethionine synthetase; structural genomics, ATP-BI cobalt, magnesium, metal-binding, nucleotide-binding, one-C metabolism; 2.35A {Burkholderia pseudomallei} Length = 399

 Score =  384 bits (990), Expect = e-136
 Identities = 107/199 (53%), Positives = 136/199 (68%), Gaps = 5/199 (2%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
              +LFTSESV+EGHPDK+ DQ+SDA+LDA LAQD  S+VA ET   T +V++ GEITT 
Sbjct: 6   ANDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTT 65

Query: 61  ANVDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGA 120
           AN+DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         + GA
Sbjct: 66  ANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGVD-RAHDNNLDQGA 124

Query: 121 GDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNEN 180
           GDQG MFGYA DETPELMPL   L+ +L  +   +R++G  PWLRPD K+QVTV Y   +
Sbjct: 125 GDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRY--VD 182

Query: 181 GAMVPVRVHTVLISTQHDE 199
           G   P  + TV++STQH  
Sbjct: 183 G--KPHSIDTVVLSTQHAP 199

>3s82_A S-adenosylmethionine synthase; seattle structural genomics center for infectious disease, S adenosylmethionine synthetase, transferase; 1.73A {Mycobacterium avium} PDB: 3tde_A 3rv2_A Length = 407

 Score =  376 bits (967), Expect = e-132
 Identities = 112/209 (53%), Positives = 133/209 (63%), Gaps = 14/209 (6%)

Query: 1   METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK 60
            +  LFTSESV EGHPDK+CD +SD+VLDA LAQDP S+VA ET   T  V V GE+TT 
Sbjct: 7   EKGRLFTSESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTT 66

Query: 61  AN---VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH-------GH 110
           A     D    VR+    IG+ S+D G D   C V + I  QSPDIAQGV          
Sbjct: 67  AKEAFADITNTVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEG 126

Query: 111 LTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKT 170
                +  GAGDQG MFGYA ++TPE MPL   LA +L  +LTEVRKNG  P+LRPDGKT
Sbjct: 127 AADPLDAQGAGDQGLMFGYAINDTPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKT 186

Query: 171 QVTVEYYNENGAMVPVRVHTVLISTQHDE 199
           QVT+E+  E+   VPVR+ TV+ISTQH  
Sbjct: 187 QVTIEF--EDD--VPVRLDTVVISTQHAA 211

>1p7l_A S-adenosylmethionine synthetase; AMPPNP, SAM, transferase; HET: SAM ANP PPK; 2.50A {Escherichia coli} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1fug_A 1mxb_A* 1mxc_A* 1mxa_A* 1rg9_A* 1xra_A 1xrb_A 1xrc_A Length = 383

 Score =  370 bits (952), Expect = e-130
 Identities = 114/196 (58%), Positives = 137/196 (69%), Gaps = 7/196 (3%)

Query: 4   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANV 63
            LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MV+V GEITT A V
Sbjct: 3   HLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWV 62

Query: 64  DYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQ 123
           D E+I R+T R IG+  +D+G DA+ C VL  I +QSPDI QGV       P E GAGDQ
Sbjct: 63  DIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVD---RADPLEQGAGDQ 119

Query: 124 GHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAM 183
           G MFGYAT+ET  LMP     A +L  +  EVRKNGT PWLRPD K+QVT +Y  ++G  
Sbjct: 120 GLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQY--DDG-- 175

Query: 184 VPVRVHTVLISTQHDE 199
             V +  V++STQH E
Sbjct: 176 KIVGIDAVVLSTQHSE 191

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	200
3so4_A	415	Methionine-adenosyltransferase; structural genomic	100.0
3iml_A	399	S-adenosylmethionine synthetase; structural genomi	100.0
2p02_A	396	S-adenosylmethionine synthetase isoform type-2; st	100.0
3s82_A	407	S-adenosylmethionine synthase; seattle structural	100.0
1p7l_A	383	S-adenosylmethionine synthetase; AMPPNP, SAM, tran	100.0
4hpv_A	407	S-adenosylmethionine synthase; structural genomics	97.4

>3so4_A Methionine-adenosyltransferase; structural genomics, medical structural genomics of pathogen protozoa, MSGPP; 3.18A {Entamoeba histolytica}

Probab=100.00  E-value=6.5e-101  Score=700.78  Aligned_cols=197  Identities=61%  Similarity=1.005  Sum_probs=181.1

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+++|||++|||++|++|||+++
T Consensus        21 ~~~lFTSESVseGHPDKicDqISDAILDa~L~qDp~arVAcEt~vttg~V~v~GEItt~a~vD~~~ivR~~ik~IGY~~~  100 (415)
T 3so4_A           21 SRFFFTSESVSGGHPDKMCDQISDAILDACLAQDPKSHVACETATKTGLILVLGEITTNAVIDIPKIVRGVVKSIGYDDT  100 (415)
T ss_dssp             -CEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEECSSEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEG
T ss_pred             cceeEeeccccCCCChHHHhhHhHHHHHHHHhcCCCCcEEEEEEeecCeEEEEEEEecccccCHHHHHHHHHhccCCCCc
Confidence            56899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 045358           82 DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTC  161 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~  161 (200)
                      ++|||++||.|+++|++|||||+|||+.+  ++.+++||||||||||||||||||||||||+|||||++||+++||+|.+
T Consensus       101 ~~gFd~~tc~Vl~~i~~QSpDIaqGVd~~--~~~~~~GAGDQGiMFGYAtdET~elMPlpi~lAH~L~~rla~~Rk~g~l  178 (415)
T 3so4_A          101 NKGFDYQTCSVLSCVEQQSQDIAKGVHVE--KKEEDIGAGDQGIMFGYATDESKEMMPLTHVLSTKLILRLQECREKGIL  178 (415)
T ss_dssp             GGTEETTTCEEEEEEEEECCC-------------CCCCCSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             ccCccCCceEEEEecccCChhhhhccccc--cchhhcCCCcceeEEEEecCCCcccCCcHHHHHHHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999863  2345799999999999999999999999999999999999999999999


Q ss_pred             CcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          162 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       162 ~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      ||||||+||||||+|++++|+++|+||+||||||||+++
T Consensus       179 ~~LrPD~KtQVTveY~~~~g~~~P~rv~tvViStQH~~~  217 (415)
T 3so4_A          179 PWLRPDSKSQVTLEYEEVEGHLKPIRVHTIVISTQHADN  217 (415)
T ss_dssp             TTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECTT
T ss_pred             CeeccCcceEEEEEEEcCCCCceeeEEEEEEEEEecCCC
Confidence            999999999999999876678899999999999999874

>3iml_A S-adenosylmethionine synthetase; structural genomics, ATP-BI cobalt, magnesium, metal-binding, nucleotide-binding, one-C metabolism; 2.35A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.3e-99  Score=690.21  Aligned_cols=194  Identities=55%  Similarity=0.857  Sum_probs=168.1

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+++|||++|||++|++|||+++
T Consensus         7 ~~~lFTSESVseGHPDKicDqISDaILDa~L~~Dp~arVAcEt~~~tg~V~v~GEItt~a~vd~~~ivR~~i~~IGY~~~   86 (399)
T 3iml_A            7 NDYLFTSESVSEGHPDKVADQISDAILDAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNT   86 (399)
T ss_dssp             CEEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEECSSEEEEEEEEECSCCCCHHHHHHHHHHHHTCC--
T ss_pred             cCceEeccccCCCCCcHHHHHHhHHHHHHHHhcCCCCcEEEEEEeccCeEEEEEEEecccccCHHHHHHHHHhccCCCCc
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 045358           82 DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTC  161 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~  161 (200)
                      ++|||++||.|+++|++|||||+|||+.+. .+.+++||||||||||||||||||||||||+|||||++||+++||+|.+
T Consensus        87 ~~gFd~~tc~Vl~~i~~QSpDIaqGVd~~~-~~~~~~GAGDQGiMFGYA~~ET~elMPlpi~lAH~L~~rl~~~Rk~g~l  165 (399)
T 3iml_A           87 DYGIDYRGCAVLVAYDKQSPDIAQGVDRAH-DNNLDQGAGDQGLMFGYACDETPELMPLPIHLSHRLVERQANLRRDGRL  165 (399)
T ss_dssp             -------CCEEEEEEEEECC-------------CTTCCBSSCEEEEEEEETTSTTSCCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             ccCccCCceEEEEecccCChhHhhhhcccc-cchhhcCcCcceeEEEEecCCccccCCcHHHHHHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999631 1235799999999999999999999999999999999999999999999


Q ss_pred             CcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          162 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       162 ~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      ||||||+||||||+|+++    +|+||+||||||||+++
T Consensus       166 ~~LrPD~KtQVTveY~~~----~P~rv~tvViStQH~~~  200 (399)
T 3iml_A          166 PWLRPDAKSQVTVRYVDG----KPHSIDTVVLSTQHAPE  200 (399)
T ss_dssp             TTEEEEEEEEEEEEEETT----EEEEEEEEEEEEEECTT
T ss_pred             CeecCCCceEEEEEEECC----ceeeEEEEEEEeecCCC
Confidence            999999999999999853    89999999999999874

>2p02_A S-adenosylmethionine synthetase isoform type-2; structural genomics, structural genomics consortium, SGC, transferase; HET: SAM; 1.21A {Homo sapiens} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1qm4_A 1o92_A* 1o93_A* 1o90_A* 1o9t_A 2obv_A*

Probab=100.00  E-value=2e-99  Score=689.09  Aligned_cols=197  Identities=66%  Similarity=1.059  Sum_probs=187.2

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+++|||++|||++|++|||+++
T Consensus        17 ~~~lFTSESVseGHPDKicDqISDAILDa~L~~Dp~arVAcEt~v~tg~v~v~GEitt~a~vd~~~ivR~~i~~IGY~~~   96 (396)
T 2p02_A           17 GTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDS   96 (396)
T ss_dssp             CEEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEG
T ss_pred             cceEEeeccccCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCeEEEEEEEcccccCCHHHHHHHHHHHhCCCCc
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 045358           82 DVGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTC  161 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~  161 (200)
                      ++|||++||.|+++|++|||||+|||+... + .+++||||||||||||||||||||||||+|||||++||+++||+|.+
T Consensus        97 ~~gfd~~tc~Vl~~i~~QSpDIaqGV~~~~-~-~~e~GAGDQGiMFGYAt~ET~elMPlpi~lAh~L~~rla~~Rk~g~l  174 (396)
T 2p02_A           97 SKGFDYKTCNVLVALEQQSPDIAQGVHLDR-N-EEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTL  174 (396)
T ss_dssp             GGTEETTTSEEEEEEECCCHHHHHHHTTTC-C-GGGCCBSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             ccCCCCCceEEEEecccCChhhhhcccccc-c-ccccCCCCcceEEEEeCCCCcccCChHHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999531 1 13699999999999999999999999999999999999999999999


Q ss_pred             CcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          162 PWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       162 ~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      |||||||||||||+|++++|.|+|+||+|||||+||+++
T Consensus       175 ~~lrPD~KtQVTveY~~~~~~~~P~rv~tvviS~QH~~~  213 (396)
T 2p02_A          175 PWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEE  213 (396)
T ss_dssp             TTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEEECSS
T ss_pred             CccCCCcceEEEEEEEcCCCCcCceEEeEEEEeecCCCC
Confidence            999999999999999854466789999999999999874

>3s82_A S-adenosylmethionine synthase; seattle structural genomics center for infectious disease, S adenosylmethionine synthetase, transferase; 1.73A {Mycobacterium avium} PDB: 3tde_A 3rv2_A

Probab=100.00  E-value=1.4e-99  Score=692.08  Aligned_cols=195  Identities=57%  Similarity=0.853  Sum_probs=171.7

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeec---eeccHHHHHHHHHHhcCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTK---ANVDYEKIVRDTCRSIGF   78 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~---a~vD~~~ivR~~i~~IGY   78 (200)
                      ++||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+   ++|||++|||++|++|||
T Consensus         8 ~~~lFTSESVseGHPDKicDqISDAILDa~L~~Dp~arVAcEt~vttg~V~v~GEItt~~~~a~vd~~~ivR~~i~~IGY   87 (407)
T 3s82_A            8 KGRLFTSESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADITNTVRERILDIGY   87 (407)
T ss_dssp             -CEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCHHHHHTHHHHHHHHHHHHTC
T ss_pred             CceEEeeccccCCCCcHHHhhhhHHHHHHHHhcCCCCcEEEEEEeccCeEEEEEEEeeCCcccccCHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999999999999999999999999999   999999999999999999


Q ss_pred             CCCCCCCCCCceEEEEeecCCChhhhhcccCCCC-------CCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHH
Q 045358           79 TSADVGLDADHCKVLVNIEQQSPDIAQGVHGHLT-------KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAK  151 (200)
Q Consensus        79 ~~~~~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~-------~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~r  151 (200)
                      +++++|||++||.|+++|++|||||+|||+...+       +..+++||||||||||||||||||||||||+|||||++|
T Consensus        88 ~~~~~gFd~~tc~Vl~~i~~QSpDIaqGVd~~~e~r~~~~~~~~~~~GAGDQGiMFGYA~~ET~elMPlpi~lAH~L~~r  167 (407)
T 3s82_A           88 DSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEGAADPLDAQGAGDQGLMFGYAINDTPERMPLPIALAHRLSRR  167 (407)
T ss_dssp             EEGGGTEETTTSEEEEEEEEECC--------------------------CCCEEEEEEEETTSTTSSCHHHHHHHHHHHH
T ss_pred             CCcccCcCCCceEEEEecccCChHHHhhhcchhhcccccccchhhhcCCccceeEEEEecCCCcccCchHHHHHHHHHHH
Confidence            9999999999999999999999999999996421       112579999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCcccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          152 LTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       152 l~~~Rk~g~~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      |+++||+|.+||||||+||||||+|+++    +|+||+||||||||+++
T Consensus       168 la~~Rk~g~l~~LrPD~KtQVTveY~~~----~P~rv~tvViStQH~~~  212 (407)
T 3s82_A          168 LTEVRKNGVLPYLRPDGKTQVTIEFEDD----VPVRLDTVVISTQHAAD  212 (407)
T ss_dssp             HHHHHHTSSSTTEEEEEEEEEEEEEETT----EEEEEEEEEEEEEECTT
T ss_pred             HHHHHHcCCCCeecCCCceEEEEEEECC----ceeeEEEEEEEeecCCC
Confidence            9999999999999999999999999853    89999999999999874

>1p7l_A S-adenosylmethionine synthetase; AMPPNP, SAM, transferase; HET: SAM ANP PPK; 2.50A {Escherichia coli} SCOP: d.130.1.1 d.130.1.1 d.130.1.1 PDB: 1fug_A 1mxb_A* 1mxc_A* 1mxa_A* 1rg9_A* 1xra_A 1xrb_A 1xrc_A

Probab=100.00  E-value=1.4e-98  Score=681.39  Aligned_cols=191  Identities=60%  Similarity=0.891  Sum_probs=184.0

Q ss_pred             cceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCCC
Q 045358            3 TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSAD   82 (200)
Q Consensus         3 ~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~~   82 (200)
                      +||||||||+|||||||||||||||||+||+|||+|||||||++++|+|+|+|||||+++|||+++||++|++|||++++
T Consensus         2 ~~lFTSESVseGHPDKicDqISDAILDa~L~~Dp~arVAcEt~v~tg~v~v~GEitt~a~vd~~~ivR~~i~~IGY~~~~   81 (383)
T 1p7l_A            2 KHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSD   81 (383)
T ss_dssp             CEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEGG
T ss_pred             CceeeccccCCCCCcHHHHHHHHHHHHHHHhhCCCCcEEEEEEeecCcEEEEEEEeccccCCHHHHHHHHHHHhCCCCcc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q 045358           83 VGLDADHCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCP  162 (200)
Q Consensus        83 ~gfd~~~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~  162 (200)
                      +|||++||.|+++|++|||||+|||+...   .+++||||||||||||||||||||||||+|||||++||+++||+|.+|
T Consensus        82 ~gfd~~tc~v~~~i~~QSpdIa~GV~~~~---~~e~GAGDQGiMFGYA~~ET~e~MPlpi~lAh~L~~rl~~~Rk~g~~~  158 (383)
T 1p7l_A           82 MGFDANSCAVLSAIGKQSPDINQGVDRAD---PLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLP  158 (383)
T ss_dssp             GTEETTTSEEEEEEECCCHHHHHHHSCSS---TTTCCCSSCEEEEEEEETTSTTSCCHHHHHHHHHHHHHHHHHHTTSST
T ss_pred             cCcCCCceEEEEecccCChHHhhhcCccc---ccccccCCCceeeEEecCCCcccCchHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999531   235999999999999999999999999999999999999999999999


Q ss_pred             cccCCccceEEEEEecCCCeeeeeEEeEEEEeeeeCCC
Q 045358          163 WLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDET  200 (200)
Q Consensus       163 ~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~QH~~~  200 (200)
                      ||||||||||||+|++  |  +|+||+|||||+||+++
T Consensus       159 ~lrPD~KtQVtveY~~--~--~P~rv~tvviS~QH~~~  192 (383)
T 1p7l_A          159 WLRPDAKSQVTFQYDD--G--KIVGIDAVVLSTQHSEE  192 (383)
T ss_dssp             TEEEEEEEEEEEEEET--T--EEEEEEEEEEEEEECTT
T ss_pred             ccCCCccceEEEEEeC--C--ceeEEEEEEEEeecCCC
Confidence            9999999999999985  3  89999999999999874

>4hpv_A S-adenosylmethionine synthase; structural genomics, PSI-biology; 2.21A {Sulfolobus solfataricus P2}

Probab=97.40  E-value=0.00018  Score=66.29  Aligned_cols=139  Identities=23%  Similarity=0.256  Sum_probs=85.6

Q ss_pred             CCCCCcchhhhhhHHHHHHH----hhc---------CCCCeEEEEEEee--------eCeEEEEEEEeece---e----c
Q 045358           12 NEGHPDKLCDQVSDAVLDAC----LAQ---------DPDSKVACETCTK--------TNMVMVFGEITTKA---N----V   63 (200)
Q Consensus        12 ~eGHPDKicDqISDaILDa~----L~~---------Dp~arVA~E~~v~--------~~~V~v~GEitt~a---~----v   63 (200)
                      +-||||-|||-|++++=-++    |+.         |+---||-+..-+        .=.|+++|..|+..   .    +
T Consensus        29 GiGHPDsIcDgiaE~vS~aLs~~Yl~~fG~ILHHN~DK~llvgG~s~p~fGGG~vi~Pi~ii~~GRAT~~~~g~~~~~~i  108 (407)
T 4hpv_A           29 GLGHPDYIADAVAEEASRKLSLYYLKKYGVILHHNLDKTLVVGGQATPRFKGGDIIQPIYIIVAGRATTEVKTESGIDQI  108 (407)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEEEEECCEEEEETTEEEEEECEEEEEEEEECCEEECSSCEEEC
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEccEeeccCCCceeeeeEEEEEecceEEEECCccccccc
Confidence            67999999999999875442    322         6655566555433        22478899887642   2    7


Q ss_pred             cHHHHHH----HHHHhcCCCCCCCCCCCC-ceEEEEeecCCChhhhhcccCCCCCCCCCCCCCcccceeeeeCCCCCCCC
Q 045358           64 DYEKIVR----DTCRSIGFTSADVGLDAD-HCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELM  138 (200)
Q Consensus        64 D~~~ivR----~~i~~IGY~~~~~gfd~~-~~~v~~~i~~QS~dIa~gV~~~~~~~~~~~GAGDQGimfGYA~dET~e~M  138 (200)
                      .+.+|+.    +.|++.     --.+|.+ ...|...|.+-|+|+..-..+.    ..--.|-|-....|||-       
T Consensus       109 Pv~~Ia~~AAk~~l~~~-----l~~lD~e~~v~i~~~i~~GS~dL~~vf~r~----~~vp~ANDTS~gVGyAP-------  172 (407)
T 4hpv_A          109 PVGTIIIESVKEWIRNN-----FRYLDAERHVIVDYKIGKGSSDLVGIFEAS----KRVPLSNDTSFGVGFAP-------  172 (407)
T ss_dssp             CHHHHHHHHHHHHHHHH-----CSSCCTTTSEEEEEEEECCEEECC----------CCCCBCSSCCEEEEEES-------
T ss_pred             CHHHHHHHHHHHHHHHh-----cccCCCCCcEEEEeeeCCCChhHHHHhcCC----CCCccccccCceeccCC-------
Confidence            7777764    444442     1124544 3677788999999987654421    11347999999999993       


Q ss_pred             CcHHHHHHHHHHHHH------HHHHcCCCCcccCCccce
Q 045358          139 PLSHVLATKLGAKLT------EVRKNGTCPWLRPDGKTQ  171 (200)
Q Consensus       139 Pl~i~lAh~L~~rl~------~~Rk~g~~~~lrPD~KsQ  171 (200)
                       |+-  .-+|+..++      +++  ..+||.+.|-|.-
T Consensus       173 -lS~--~E~~Vl~~E~~Lns~~~k--~~~P~~GeDIKVM  206 (407)
T 4hpv_A          173 -LTK--LEKLVYETERHLNSKQFK--AKLPEVGEDIKVM  206 (407)
T ss_dssp             -CCH--HHHHHHHHHHHHHSHHHH--HHCTTEEEEEEEE
T ss_pred             -CCH--HHHHHHHHHHHhcchhhh--hhCcccCCceEEE
Confidence             322  222332222      333  3599999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	200
d2p02a1	110	d.130.1.1 (A:38-147) S-adenosylmethionine syntheta	5e-52
d1mxaa1	102	d.130.1.1 (A:1-102) S-adenosylmethionine synthetas	1e-46
d2p02a2	126	d.130.1.1 (A:148-273) S-adenosylmethionine synthet	9e-39
d1mxaa2	124	d.130.1.1 (A:108-231) S-adenosylmethionine synthet	2e-35

>d2p02a1 d.130.1.1 (A:38-147) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} Length = 110

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]

 Score =  160 bits (407), Expect = 5e-52
 Identities = 70/106 (66%), Positives = 85/106 (80%)

Query: 3   TFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKAN 62
           TFLFTSESV EGHPDK+CDQ+SDAVLDA L QDPD+KVACET  KT M+++ GEIT++A 
Sbjct: 2   TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAA 61

Query: 63  VDYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDIAQGVH 108
           VDY+K+VR+  + IG+  +  G D   C VLV +EQQSPDIAQGVH
Sbjct: 62  VDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVH 107

>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} Length = 102

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Escherichia coli [TaxId: 562]

 Score =  146 bits (370), Expect = 1e-46
 Identities = 64/100 (64%), Positives = 77/100 (77%)

Query: 4   FLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANV 63
            LFTSESV+EGHPDK+ DQ+SDAVLDA L QDP ++VACET  KT MV+V GEITT A V
Sbjct: 3   HLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWV 62

Query: 64  DYEKIVRDTCRSIGFTSADVGLDADHCKVLVNIEQQSPDI 103
           D E+I R+T R IG+  +D+G DA+ C VL  I +QSPDI
Sbjct: 63  DIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDI 102

>d2p02a2 d.130.1.1 (A:148-273) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]} Length = 126

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]

 Score =  127 bits (321), Expect = 9e-39
 Identities = 60/84 (71%), Positives = 71/84 (84%)

Query: 116 EEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVE 175
           E+IGAGDQG MFGYATDET E MPL+ VLA KL AKL E+R+NGT PWLRPD KTQVTV+
Sbjct: 3   EDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQ 62

Query: 176 YYNENGAMVPVRVHTVLISTQHDE 199
           Y  + GA++P+RVHT++IS QHDE
Sbjct: 63  YMQDRGAVLPIRVHTIVISVQHDE 86

>d1mxaa2 d.130.1.1 (A:108-231) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]} Length = 124

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Escherichia coli [TaxId: 562]

 Score =  119 bits (299), Expect = 2e-35
 Identities = 46/87 (52%), Positives = 55/87 (63%), Gaps = 4/87 (4%)

Query: 113 KRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQV 172
             P E GAGDQG MFGYAT+ET  LMP     A +L  +  EVRKNGT PWLRPD K+QV
Sbjct: 2   ADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQV 61

Query: 173 TVEYYNENGAMVPVRVHTVLISTQHDE 199
           T +Y +       V +  V++STQH E
Sbjct: 62  TFQYDDGK----IVGIDAVVLSTQHSE 84

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	200
d2p02a1	110	S-adenosylmethionine synthetase {Human (Homo sapie	100.0
d1mxaa1	102	S-adenosylmethionine synthetase {Escherichia coli	100.0
d2p02a2	126	S-adenosylmethionine synthetase {Human (Homo sapie	100.0
d1mxaa2	124	S-adenosylmethionine synthetase {Escherichia coli	100.0

>d2p02a1 d.130.1.1 (A:38-147) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]

Probab=100.00  E-value=8.7e-59  Score=359.81  Aligned_cols=108  Identities=65%  Similarity=1.044  Sum_probs=106.4

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||++||||||||||||||||+||++||+|||||||++++|+|+|+|||+|++++|+++|||++|++|||+++
T Consensus         1 g~~lfTsEsVs~GHPDKicDqISDailD~~l~~Dp~arVA~Et~v~~~~V~v~GEitt~~~vd~~~IvR~vi~~IGY~~~   80 (110)
T d2p02a1           1 GTFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDS   80 (110)
T ss_dssp             CEEEEEEEEECTTSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEG
T ss_pred             CceEEEecccCCCCCcHHHHHHHhHHHHHHHhhCcccceeEEEEecCCEEEEEEEecccccccHHHHHHHhhhccCEecC
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCChhhhhcccC
Q 045358           82 DVGLDADHCKVLVNIEQQSPDIAQGVHG  109 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~dIa~gV~~  109 (200)
                      ++|||+++|.|++.|++|||||+|||+.
T Consensus        81 ~~gfd~~t~~V~~~I~~QSpDIa~GVd~  108 (110)
T d2p02a1          81 SKGFDYKTCNVLVALEQQSPDIAQGVHL  108 (110)
T ss_dssp             GGTEETTTSEEEEEEECCCHHHHHHHTT
T ss_pred             cCCccccceEEEeeccCCChHHHhhccC
Confidence            9999999999999999999999999985

>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.1e-56  Score=341.38  Aligned_cols=102  Identities=63%  Similarity=0.938  Sum_probs=99.7

Q ss_pred             CcceeeccCCCCCCCcchhhhhhHHHHHHHhhcCCCCeEEEEEEeeeCeEEEEEEEeeceeccHHHHHHHHHHhcCCCCC
Q 045358            2 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRSIGFTSA   81 (200)
Q Consensus         2 ~~~lfTSESV~eGHPDKicDqISDaILDa~L~~Dp~arVA~E~~v~~~~V~v~GEitt~a~vD~~~ivR~~i~~IGY~~~   81 (200)
                      ++||||||||++||||||||||||||||+||++||+|||||||++++|+|+|+|||++++++||++|||+++++|||+++
T Consensus         1 s~~lfTSEsVs~GHPDKicDqISDaIlD~~L~~Dp~sRVA~Et~~~~~~v~v~GEits~~~vd~~~ivR~~i~~IGY~~~   80 (102)
T d1mxaa1           1 AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHS   80 (102)
T ss_dssp             CCEEEEEEEECTTSHHHHHHHHHHHHHHHHHTTCTTCEEEEEEEEETTEEEEEEEEECSCCCCHHHHHHHHHHHHTCEEG
T ss_pred             CCccEeccccCCCCCcHHHHHHHHHHHHHHHHhCCccceEEEEEEcCCcEEEEEeecccccccHHHHHHHHHHHhccccc
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCceEEEEeecCCChhh
Q 045358           82 DVGLDADHCKVLVNIEQQSPDI  103 (200)
Q Consensus        82 ~~gfd~~~~~v~~~i~~QS~dI  103 (200)
                      ++|||+++|.|++.|++|||||
T Consensus        81 ~~gfd~~~~~V~~~i~~QSpdI  102 (102)
T d1mxaa1          81 DMGFDANSCAVLSAIGKQSPDI  102 (102)
T ss_dssp             GGTEETTTSEEEEEEEEECCC-
T ss_pred             ccccccCceEEEEeccCCCCCC
Confidence            9999999999999999999998

>d2p02a2 d.130.1.1 (A:148-273) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Human (Homo sapiens), isoform type-2 [TaxId: 9606]

Probab=100.00  E-value=1.6e-49  Score=313.51  Aligned_cols=85  Identities=71%  Similarity=1.133  Sum_probs=81.2

Q ss_pred             CCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCcccCCccceEEEEEecCCCeeeeeEEeEEEEee
Q 045358          116 EEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLIST  195 (200)
Q Consensus       116 ~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS~  195 (200)
                      +++|||||||||||||||||+||||||+|||+|++||+++||+|++|||||||||||||+|+++++.++|+||++||+|+
T Consensus         3 ~~~GAGDQGimfGYA~~ET~~~MPlpi~lAh~L~~~l~~~Rk~~~~~~LrPD~KsQVTv~Y~~~~~~~~P~~i~tVViSt   82 (126)
T d2p02a2           3 EDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISV   82 (126)
T ss_dssp             GGCCBSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHTTSSTTEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred             cccCCCcceeeeeeEcCCCcccCChHHHHHHHHHHHHHHHHHcCCCCcccCCCcEEEEEEEecCCCceeEEEEEEEEEec
Confidence            47999999999999999999999999999999999999999999999999999999999999876777899999999999


Q ss_pred             eeCCC
Q 045358          196 QHDET  200 (200)
Q Consensus       196 QH~~~  200 (200)
                      ||+++
T Consensus        83 QH~~~   87 (126)
T d2p02a2          83 QHDEE   87 (126)
T ss_dssp             EECSS
T ss_pred             ccccc
Confidence            99874

>d1mxaa2 d.130.1.1 (A:108-231) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: S-adenosylmethionine synthetase
superfamily: S-adenosylmethionine synthetase
family: S-adenosylmethionine synthetase
domain: S-adenosylmethionine synthetase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-48  Score=307.04  Aligned_cols=82  Identities=56%  Similarity=0.850  Sum_probs=78.1

Q ss_pred             CCCCCCCcccceeeeeCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCcccCCccceEEEEEecCCCeeeeeEEeEEEEe
Q 045358          115 PEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLIS  194 (200)
Q Consensus       115 ~~~~GAGDQGimfGYA~dET~e~MPl~i~lAh~L~~rl~~~Rk~g~~~~lrPD~KsQVtv~Y~~~~~~~~p~rv~tiviS  194 (200)
                      .+++|||||||||||||||||+||||||+|||+|+++|+++||+|.+|||||||||||||+|+++    +|+||++||+|
T Consensus         4 ~~~~GAGDQGimfGYA~~ET~~~MPl~i~lah~l~~~l~~~Rk~~~~~~L~PD~KsQVTv~Y~~~----~P~~i~tiViS   79 (124)
T d1mxaa2           4 PLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDG----KIVGIDAVVLS   79 (124)
T ss_dssp             GGGCCCSSCEEEEEEEETTSTTSSCHHHHHHHHHHHHHHHHHHTSSSTTEEEEEEEEEEEEESSS----CEEEEEEEEEE
T ss_pred             hhccCCCcceEeeeEEcCCccccCchHHHHHHHHHHHHHHHHHcCCCCcccCCCCEEEEEEeeCC----CCEEEEEEEee
Confidence            35789999999999999999999999999999999999999999999999999999999999864    89999999999


Q ss_pred             eeeCCC
Q 045358          195 TQHDET  200 (200)
Q Consensus       195 ~QH~~~  200 (200)
                      |||+++
T Consensus        80 tQH~~~   85 (124)
T d1mxaa2          80 TQHSEE   85 (124)
T ss_dssp             EEECSS
T ss_pred             ccCCCc
Confidence            999874