Citrus Sinensis ID: 045647

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
Protein Sequence
MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPRKKRKLDEPVVEEDIDQPAEPVVVEGHQNQYLQETQPQTSTELVP
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEEcccccccccHHHHHccccccccccEEEEccccccccccccccccccccccccccccccEEEcccccEEEEEEcEEEcccccccccccEEEEEcccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHccccccEEEEEEHHEEEEccccccccccHccccccccccEEEEEcccccccccccccccccccccEEEccccccEEccccccEEEEEEEEEEEcccccccccEEEEEEEccccccccccccccEEEEEEEEcccccccccccccccccccccccHHHccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mqgtrpplplgckfqpsdeQLVLFYLFNkisgtpapflddfvrtenlygnkepwqIWRQFgvrdledgedlYFFTRLKkksvngsridrrvgtgtwqgedagKAVVSRnsrkkigskkrfryekdqsphnccwilheyslnplqlpqnlqssdLVLCRIRkngepaaagqktprkkrkldepvveedidqpaepvvveghqnqylqetqpqtstelvp
Flexible Loop (DISEMBL)
mqgtrpplplgckfqPSDEQLVLFYLFNKISGTPAPFLDDFVRTENlygnkepwqiWRQFGVRDLEDGEDLYFFTrlkkksvngsridrrvgtgtwqgedagkavvsrnsrkkigskkrfryekdqSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNgepaaagqktprkkrkldepvveedidqpaepvvvEGHQnqylqetqpqtstelvp
Low Complexity Region (SEG)
MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEYslnplqlpqnlqssDLVLCRIRKNGEPAAAGQKTPRKKRKLDEPVVEEDIDQPAEPVVVEGHQNQYLQETQPQTSTELVP
Disordered region (IsUnstruct)
*************F**SDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTW********************************HNCCWILHEYSLNPLQLPQNLQSSDLVLCRI***********************************************************
Disordered Region (DISOPRED)
*****PP**LGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEY***************LVLCRIR**********************************************************
Disordered Region (DISEMBL)
MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNG************************IDQPAEPVVVEGHQNQYLQ************
Disordered Region (DISPRO)
*******LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGE******************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPRKKRKLDEPVVEEDIDQPAEPVVVEGHQNQYLQETQPQTSTELVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	218	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	yes	no	0.834	0.320	0.314	1e-15
Q8H4S4	425	NAC transcription factor	yes	no	0.802	0.411	0.281	5e-15
A2YMR0	425	NAC transcription factor	N/A	no	0.802	0.411	0.276	6e-15
A0SPJ8	406	NAC transcription factor	N/A	no	0.798	0.428	0.285	1e-14
D2SMN4	406	NAC transcription factor	N/A	no	0.798	0.428	0.285	2e-14
A0SPJ6	396	NAC transcription factor	N/A	no	0.944	0.520	0.270	4e-14
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.665	0.425	0.358	5e-14
A0SPJ4	405	NAC transcription factor	N/A	no	0.899	0.483	0.266	5e-14
A0SPJ3	405	NAC transcription factor	N/A	no	0.747	0.402	0.283	6e-14
Q52QH4	318	NAC domain-containing pro	no	no	0.665	0.455	0.327	1e-13

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 28/210 (13%)

Query: 2   QGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQI--WRQ 59
           +G+   L  G +F P+DE+LV +YL  K+   P  F  D +   ++Y   EPW +    +
Sbjct: 3   RGSVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKF--DAISVTDIY-KSEPWDLPDKSK 59

Query: 60  FGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKR 119
              RDLE     YFF+ L KK  NGS+ +R    G W+    GK    RN  + +G KK 
Sbjct: 60  LKSRDLE----WYFFSMLDKKYSNGSKTNRATEKGYWK--TTGKDREIRNGSRVVGMKKT 113

Query: 120 FRYEKDQSPHN--CCWILHEYSLNPLQLPQ-NLQSSDLVLCRI-RKNGEPAAAGQKTPRK 175
             Y K ++P      W++HEY L+   L +  +     VLCRI +K+G         P+ 
Sbjct: 114 LVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSG-------TGPKN 166

Query: 176 KRKLDEPVVEEDIDQ------PAEPVVVEG 199
             +   P +EE+ ++      PA+    EG
Sbjct: 167 GEQYGAPYLEEEWEEDGMTYVPAQDAFSEG 196

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score = 81.3 bits (199), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 31/206 (15%)

Query: 3   GTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           G+ P LP G +F P+DE+LV+ YL  K +  P P     +   +LY   +PW +  +   
Sbjct: 24  GSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVT--IIAEVDLY-KFDPWDLPEKANF 80

Query: 63  RDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNS-RKKIGSKKRFR 121
            +    ++ YFF+   +K  NG+R +R   +G W+     K ++S  S R+K+G KK   
Sbjct: 81  GE----QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALV 136

Query: 122 YEKDQSPHNC--CWILHEYSLNPLQLPQ---------------------NLQSSDLVLCR 158
           + + + P      WI+HEY L                            +L+  D VLCR
Sbjct: 137 FYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCR 196

Query: 159 IRKNGEPAAAGQKTPRKKRKLDEPVV 184
           I K    A AGQ++   +  +++ V 
Sbjct: 197 IYKKTNKAGAGQRSMECEDSVEDAVA 222

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 31/206 (15%)

Query: 3   GTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           G+ P LP G +F P+DE+LV+ YL  K +  P P     +   +LY   +PW++  +   
Sbjct: 24  GSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVT--IIAEVDLY-KFDPWELPEKANF 80

Query: 63  RDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNS-RKKIGSKKRFR 121
            +    ++ YFF+   +K  NG+R +R   +G W+     K +++  S R+K+G KK   
Sbjct: 81  GE----QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALV 136

Query: 122 YEKDQSPHNC--CWILHEYSLNPLQLPQ---------------------NLQSSDLVLCR 158
           + + + P      WI+HEY L                            +L+  D VLCR
Sbjct: 137 FYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCR 196

Query: 159 IRKNGEPAAAGQKTPRKKRKLDEPVV 184
           I K    A AGQ++   +  +++ V 
Sbjct: 197 IYKKTNKAGAGQRSMECEDSVEDAVA 222

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 29/203 (14%)

Query: 3   GTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           G+ P LP G +F P+DE+LV+ YL  K +  P P     +   +LY   +PW++  +   
Sbjct: 30  GSAPELPPGFRFHPTDEELVVHYLKKKAAKAPLPVT--IIAEVDLY-KFDPWELPEKATF 86

Query: 63  RDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNS---RKKIGSKKR 119
            + E     YFF+   +K  NG+R +R   +G W+     K +++  +   R+K+G KK 
Sbjct: 87  GEHE----WYFFSPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKA 142

Query: 120 FRYEKDQSPHN--CCWILHEYSLN-------------PL----QLPQNLQSSDLVLCRIR 160
             + + + P      WI+HEY L              P+    + P +L+  D VLCRI 
Sbjct: 143 LVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIY 202

Query: 161 KNGEPAAAGQKTPRKKRKLDEPV 183
           K    AAA     ++  + ++ V
Sbjct: 203 KKTSKAAAAVGDEQRSMECEDSV 225

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score = 79.0 bits (193), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 29/203 (14%)

Query: 3   GTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           G+ P LP G +F P+DE+LV+ YL  K +  P P     +   +LY   +PW++  +   
Sbjct: 30  GSAPELPPGFRFHPTDEELVVHYLKKKAAKAPLPVT--IIAEVDLY-KFDPWELPEKATF 86

Query: 63  RDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNS---RKKIGSKKR 119
            + E     YFF+   +K  NG+R +R   +G W+     K +++  +   R+K+G KK 
Sbjct: 87  GEHE----WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKA 142

Query: 120 FRYEKDQSPHN--CCWILHEYSLN-------------PL----QLPQNLQSSDLVLCRIR 160
             + + + P      WI+HEY L              P+    + P +L+  D VLCRI 
Sbjct: 143 LVFYRGKPPRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIY 202

Query: 161 KNGEPAAAGQKTPRKKRKLDEPV 183
           K    AAA     ++  + ++ V
Sbjct: 203 KKTSKAAAAVGDEQRSMECEDSV 225

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score = 78.2 bits (191), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 27/233 (11%)

Query: 3   GTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           G+ P LP G +F P+DE+LV+ YL  K +  P P     +   +LY   +PW++  +   
Sbjct: 23  GSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVT--IITEVDLY-KFDPWELPEKATF 79

Query: 63  RDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRN-SRKKIGSKKRFR 121
            +    ++ YFF+   +K  NG+R +R   +G W+     K +++    R+K+G KK   
Sbjct: 80  GE----QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALV 135

Query: 122 YEKDQSPHN--CCWILHEYSLNPLQL---------------PQNLQSSDLVLCRIRKNGE 164
           + + + P      WI+HEY L                      +L+  D VLCRI K   
Sbjct: 136 FYRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKKIN 195

Query: 165 PAAAG--QKTPRKKRKLDEPVVEEDIDQPAEPVVVEGHQNQYLQETQPQTSTE 215
            AAAG  Q++   +  +++ V    +   A       H + Y      Q S E
Sbjct: 196 KAAAGDQQRSMECEDSVEDAVTAYPLYATAGMTGAGAHGSNYDSLLHHQDSHE 248

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 80/156 (51%), Gaps = 11/156 (7%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNK-EPWQIWRQFGVRDLE 66
           +P G +F P+DE+L+ +YL  KIS     F  + +R  +L  NK EPW +  +  +    
Sbjct: 9   VPPGFRFHPTDEELLHYYLKKKIS--YQKFEMEVIREVDL--NKLEPWDLQERCKIGSTP 64

Query: 67  DGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQ 126
             E  YFF+   +K   GSR +R    G W+     K +  RNS KKIG +K   + K +
Sbjct: 65  QNE-WYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCI--RNSYKKIGMRKTLVFYKGR 121

Query: 127 SPHN--CCWILHEYSLNPLQLPQNLQSSD-LVLCRI 159
           +PH     WI+HEY L     PQ   S D  V+CR+
Sbjct: 122 APHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRV 157

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score = 77.8 bits (190), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 33/229 (14%)

Query: 2   QGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFG 61
           +G+ P LP G +F P+DE+LV+ YL  K    P P   + +   +LY   +PW++  +  
Sbjct: 28  RGSAPELPPGFRFHPTDEELVVHYLKKKADKAPLPV--NIIAEVDLY-KFDPWELPEKAT 84

Query: 62  VRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNS-----RKKIGS 116
           + +    ++ YFF+   +K  NG+R +R   +G W+     K +++  +     R+K+G 
Sbjct: 85  IGE----QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGV 140

Query: 117 KKRFRYEKDQSPHN--CCWILHEYSLN-------------PL----QLPQNLQSSDLVLC 157
           KK   + + + P      WI+HEY L              P+    +   +L+  D VLC
Sbjct: 141 KKALVFYRGKPPKGLKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLC 200

Query: 158 RIRKNGEPAAAG--QKTPRKKRKLDEPVVEEDIDQPAEPVVVEGHQNQY 204
           RI K    AAAG  Q+    +  +++ V    +   A       H + Y
Sbjct: 201 RIYKKINKAAAGDQQRNTECEDSVEDAVTAYPLYATAGMTGAGAHGSNY 249

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 31/194 (15%)

Query: 2   QGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFG 61
           +G+ P LP G +F P+DE+LV+ YL  K +  P P     +   +LY   +PW++  +  
Sbjct: 27  RGSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPV--TIIAEVDLY-KFDPWELPEKAT 83

Query: 62  VRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNS-----RKKIGS 116
             +    ++ YFF+   +K  NG+R +R   +G W+     K +++  +     R+K+G 
Sbjct: 84  FGE----QEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGV 139

Query: 117 KKRFRYEKDQSPHN--CCWILHEYSLNPL-----------------QLPQNLQSSDLVLC 157
           KK   + + + P      WI+HEY L  +                 +   +L+  D VLC
Sbjct: 140 KKALVFYRGKPPKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLC 199

Query: 158 RIRKNGEPAAAGQK 171
           RI K    AAAG +
Sbjct: 200 RIYKKINKAAAGDQ 213

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score = 76.6 bits (187), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 14/159 (8%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
           LP G +F P+DE+LV+ YL  K++  P P     +   +LY   +PW +      + L  
Sbjct: 21  LPPGFRFHPTDEELVVHYLCRKVARQPLPV--PIIAEVDLY-KLDPWDL----PEKALFG 73

Query: 68  GEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQS 127
            ++ YFFT   +K  NGSR +R  G G W+   A K V  + S + +G KK   +   ++
Sbjct: 74  RKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKA 133

Query: 128 PHNCC--WILHEYSL-NPLQLPQNLQSS----DLVLCRI 159
           P      WI+HEY L +  + P   + S    + VLCR+
Sbjct: 134 PRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRL 172

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
357512399	210	NAC domain-containing protein [Medicago	0.830	0.861	0.382	2e-30
357439789	325	NAC domain protein [Medicago truncatula]	0.678	0.455	0.429	4e-29
255584644	376	NAC domain-containing protein, putative	0.692	0.401	0.455	8e-29
255577785	328	transcription factor, putative [Ricinus	0.706	0.469	0.437	1e-28
255577787	316	conserved hypothetical protein [Ricinus	0.683	0.471	0.439	2e-28
255545410	363	transcription factor, putative [Ricinus	0.752	0.451	0.418	8e-28
449448878	306	PREDICTED: NAC domain-containing protein	0.724	0.516	0.435	3e-27
449442783	301	PREDICTED: NAC domain-containing protein	0.853	0.617	0.399	1e-26
255580284	508	transcription factor, putative [Ricinus	0.678	0.291	0.411	8e-25
449457267	211	PREDICTED: NAC domain-containing protein	0.743	0.767	0.403	9e-24

>gi|357512399|ref|XP_003626488.1| NAC domain-containing protein [Medicago truncatula] gi|355501503|gb|AES82706.1| NAC domain-containing protein [Medicago truncatula]

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 2/183 (1%)

Query: 14  FQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYF 73
           F P+D++L+  +L+N+I   P P     +  E     K PW+IW +F       G+DLYF
Sbjct: 11  FTPTDDELIRSFLYNRIHNNPVPNYITILDYELFGIVKNPWEIWEEFAPSHSYCGKDLYF 70

Query: 74  FTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCW 133
           FT LKKKS    R+ R +G+GTW+GED GK +V++ + K +G KKRFR+ K  + H+  W
Sbjct: 71  FTTLKKKSATSKRLIRTIGSGTWEGEDTGKGIVAKETNKVLGIKKRFRFGKSNTFHDGAW 130

Query: 134 ILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPRKKRKLDEPVVEEDIDQPAE 193
           ILHEY+L+   L  N  +++ VLCR RKN +     Q        +  P +  ++D   +
Sbjct: 131 ILHEYNLDK-SLINNTLANNYVLCRFRKNLK-INQHQSNSHLMNSIGIPRINVELDGQGK 188

Query: 194 PVV 196
            VV
Sbjct: 189 TVV 191

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357439789|ref|XP_003590172.1| NAC domain protein [Medicago truncatula] gi|355479220|gb|AES60423.1| NAC domain protein [Medicago truncatula]

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/149 (42%), Positives = 92/149 (61%), Gaps = 1/149 (0%)

Query: 14  FQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYF 73
             P+D++L+  +L+NKI   P P     +  +     K PW+IW +FG  +   G+DLYF
Sbjct: 11  ITPTDDELLQQFLYNKIHNKPLPNHITILEHDLFGTAKNPWEIWEEFGTSNSNRGKDLYF 70

Query: 74  FTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCW 133
           FT LKKKS   SR+ R +G G W+GED+GK + +++  + +G KKRFR+EK  +  +  W
Sbjct: 71  FTTLKKKSATSSRVVRTIGLGRWEGEDSGKNIFAKDKNQILGMKKRFRFEKSDTSQDGGW 130

Query: 134 ILHEYSLNPLQLPQNLQSSDLVLCRIRKN 162
           ILHEYSL+   L  N   ++ VLCR RKN
Sbjct: 131 ILHEYSLHN-SLISNPLDNNYVLCRFRKN 158

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584644|ref|XP_002533045.1| NAC domain-containing protein, putative [Ricinus communis] gi|223527164|gb|EEF29335.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/167 (45%), Positives = 101/167 (60%), Gaps = 16/167 (9%)

Query: 1   MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQF 60
           MQ  +  +P+G +F P+D +LV +YLFNK++G   P  +  V   NLYG  EP Q+W +F
Sbjct: 1   MQQLKDQIPVGYRFNPTDCELVGYYLFNKLNGCLLPIDNMLVADTNLYGKDEPLQLWEKF 60

Query: 61  G--VRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGT-GTWQGEDAGKAVVSRNSRKKI--G 115
           G       DGE +Y FT+LKKK   GSRI R VG  GTW G DAGK V  + +R ++  G
Sbjct: 61  GGNCSFYSDGE-IYLFTKLKKK---GSRILRSVGAGGTWHGVDAGKPVRIKTNRGQLIEG 116

Query: 116 SKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKN 162
           +KK F Y    S H+ CWI+HE+SL  +       S D VLCR++KN
Sbjct: 117 TKKCFSYRNPNSIHDGCWIMHEFSLFDI-------SYDWVLCRLKKN 156

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577785|ref|XP_002529767.1| transcription factor, putative [Ricinus communis] gi|223530765|gb|EEF32633.1| transcription factor, putative [Ricinus communis]

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/169 (43%), Positives = 101/169 (59%), Gaps = 15/169 (8%)

Query: 1   MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVR-TENLYGNKEPWQIWRQ 59
           M+     LP GC+F+P+DE+LV  YLF K +      +++ V    +LYG+KEPW++W Q
Sbjct: 1   MEQFLATLPSGCRFKPTDEELVAIYLFKKTNNLNLSDVENMVVPVCDLYGDKEPWELWDQ 60

Query: 60  FGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAV---VSRNSRKKI-- 114
           F    L    DL+FFT LKKK    SRI RRVG GTW GE+ G+ V   V   + K++  
Sbjct: 61  FAQNQLFINGDLFFFTELKKKP-KSSRILRRVGKGTWHGENKGEPVNVLVDVGNAKQLMI 119

Query: 115 -GSKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKN 162
             +KKRF Y    S H+C WILHE+SL+ +       S++ VLCR+R N
Sbjct: 120 QATKKRFSYRNQNSAHHCRWILHEFSLDNV-------STNWVLCRLRNN 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577787|ref|XP_002529768.1| conserved hypothetical protein [Ricinus communis] gi|223530766|gb|EEF32634.1| conserved hypothetical protein [Ricinus communis]

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/164 (43%), Positives = 96/164 (58%), Gaps = 15/164 (9%)

Query: 6   PPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVR-TENLYGNKEPWQIWRQFGVRD 64
             LP GC+F P+DE+LV  YLF K        +++ +    +LYG+KEPW++W QF    
Sbjct: 6   ATLPTGCRFSPTDEELVAMYLFKKTKNLNLSDVENMIVPVCDLYGDKEPWELWDQFSQNQ 65

Query: 65  LEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAV---VSRNSRKKI---GSKK 118
           L    DLYFFT LKKK    SRI RRVG GTW GE+  + V   +   S K++    +KK
Sbjct: 66  LFTNGDLYFFTELKKKP-KSSRISRRVGKGTWHGENKREPVNVLLDVGSAKQLMIQATKK 124

Query: 119 RFRYEKDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKN 162
           RF Y    S H+C WILHE+SL+ +       S++ VLCR+R N
Sbjct: 125 RFNYRNQNSAHHCRWILHEFSLDNV-------STNWVLCRLRNN 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545410|ref|XP_002513765.1| transcription factor, putative [Ricinus communis] gi|223546851|gb|EEF48348.1| transcription factor, putative [Ricinus communis]

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/184 (41%), Positives = 114/184 (61%), Gaps = 20/184 (10%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISG----TPAPFLDDFVRTENLYGNKEPWQIWRQFGVR 63
           + +G +F+P DE+L+++YL +KI+      P P     V+  +LYG  EPW+IW  FG +
Sbjct: 7   MQVGVRFRPLDEELLMYYLSHKINNLSLPNPCP-----VKDCDLYGKNEPWEIWDYFGGQ 61

Query: 64  DLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYE 123
           +L D E LYFFT+LK+KS + SRI R VGTGTW G+ +GK V+ R ++K IG  K+F Y+
Sbjct: 62  NLMDVEFLYFFTQLKRKSSSSSRILRTVGTGTWHGDTSGKPVLDRKTKKVIGLIKKFHYK 121

Query: 124 KDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPRKKRKLDEPV 183
           K +S HN  W++ EYSL         QSSD VLC ++ N     +G+K  R + +  + +
Sbjct: 122 KPKSAHNGGWLMREYSLVG-------QSSDCVLCCLKMN----KSGEKRNRLEAETKDYI 170

Query: 184 VEED 187
           +  D
Sbjct: 171 IYND 174

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448878|ref|XP_004142192.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus] gi|449516019|ref|XP_004165045.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/186 (43%), Positives = 109/186 (58%), Gaps = 28/186 (15%)

Query: 7   PLPL----GCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           PLPL    G KF+P+D+QL L YL  KI G   P+    V   +LYG  EPW+IW+ FG 
Sbjct: 9   PLPLNHYVGVKFRPTDQQL-LHYLHCKIYG--QPYFQGAVFDFDLYGGVEPWEIWQSFGG 65

Query: 63  RDLEDGEDLYFFTRLKKKSVNG----SRIDRRVG--TGTWQGEDAGKAV-VSRNSRKKIG 115
            D   GEDLYFFT+LK+ + N     + I+R++G   GTW GE++   + V+++  + IG
Sbjct: 66  ID---GEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIG 122

Query: 116 SKKRFRYEKDQ-SPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPR 174
            +KRFRYE +    H+  WI+HEYSL+P  L       + VLCRIRKN           R
Sbjct: 123 YRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKN----------QR 172

Query: 175 KKRKLD 180
            KRKL+
Sbjct: 173 AKRKLE 178

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442783|ref|XP_004139160.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus] gi|449485396|ref|XP_004157155.1| PREDICTED: NAC domain-containing protein 68-like [Cucumis sativus]

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 32/218 (14%)

Query: 7   PLPL----GCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGV 62
           PLPL    G KF+P+D+QL L YL  KI G   P+    V   +LYG  EPW+IW+ FG 
Sbjct: 13  PLPLNHYVGLKFRPTDQQL-LHYLHCKIYG--QPYFQGAVFDFDLYGGVEPWEIWQSFGG 69

Query: 63  RDLEDGEDLYFFTRLKKKSVN----GSRIDRRVG--TGTWQGEDAGKAV-VSRNSRKKIG 115
               DGEDLYFFT+LK+ + N     + ++R++G   GTW GE++   + V+ N  + IG
Sbjct: 70  I---DGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIG 126

Query: 116 SKKRFRYEKDQ-SPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPR 174
            +KRFRYE +    H+  WI+HEYS++   L      S+ VLCR+RKN           R
Sbjct: 127 YRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKN----------ER 176

Query: 175 KKRKLDEPVVEEDIDQPAEPVVVEGH--QNQYLQETQP 210
            KRKL E  ++ +  QP +  +   H   N+   E QP
Sbjct: 177 VKRKLLE--IQGEAKQPNKKRIKAPHISDNERCDELQP 212

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580284|ref|XP_002530971.1| transcription factor, putative [Ricinus communis] gi|223529447|gb|EEF31406.1| transcription factor, putative [Ricinus communis]

 Score =  119 bits (298), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 15/163 (9%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
           LP G +F P+D++LVL YL N+++  P      F+   ++YG+ EPWQIW   G  D   
Sbjct: 13  LPPGYRFDPTDQELVLHYLLNRVARKPLS-CQYFISEIDIYGDMEPWQIWDSLGKAD--- 68

Query: 68  GEDLYFFTRLKKKSVNGSRIDRRVGT--GTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKD 125
            + LY FT LKK++ NGS I RR+G+  G+W GED+GK       +    ++KRFRYE  
Sbjct: 69  NDVLYVFTPLKKRAANGSTILRRIGSNGGSWHGEDSGKEFKLNGVK---WTQKRFRYENR 125

Query: 126 QS-PHNCCWILHEYSL-----NPLQLPQNLQSSDLVLCRIRKN 162
           +  PH+  W++ EYSL     N ++  +N  +  +VLCRI+KN
Sbjct: 126 KCKPHDGAWLMQEYSLDQSLVNKIKEKRNDDNEIIVLCRIKKN 168

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457267|ref|XP_004146370.1| PREDICTED: NAC domain-containing protein 90-like [Cucumis sativus]

 Score =  115 bits (289), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/176 (40%), Positives = 103/176 (58%), Gaps = 14/176 (7%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQF-GVRDLE 66
           +P+G  F P++E+L+ +YL+NK+ G   P L   +   +LY  +EP QIW+Q  GV    
Sbjct: 6   IPVGYIFCPTEEELLGYYLYNKVLGGQTPPL--VLPVIDLY-TQEPSQIWQQCRGV---- 58

Query: 67  DGEDLYFFTRLKKKSVNGSRIDRRVGT--GTWQGEDAGKAVVSRN-SRKKIGSKKRFRYE 123
           D +D+YFFT L+KK    SRI R++G+  GTW GE+  + V S       +G+ KRFRYE
Sbjct: 59  DNQDIYFFTTLQKKK---SRIIRKIGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYE 115

Query: 124 KDQSPHNCCWILHEYSLNPLQLPQNLQSSDLVLCRIRKNGEPAAAGQKTPRKKRKL 179
           K Q   +C WI++EY+LNP  +P+ L     VLC IRK    +        K+R +
Sbjct: 116 KSQVKEDCTWIMYEYTLNPSIVPEGLVHDSYVLCMIRKKIVKSEKMVMASNKRRAM 171

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	218
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.848	0.336	0.304	4.2e-16
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.857	0.329	0.312	1.2e-15
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.683	0.471	0.287	2.4e-15
TAIR|locus:2122804	341	NAC070 "NAC domain containing	0.678	0.434	0.335	4.8e-15
TAIR|locus:2016049	324	VND7 "vascular related NAC-dom	0.591	0.398	0.357	6.3e-15
TAIR|locus:2179877	252	NAC083 "NAC domain containing	0.651	0.563	0.318	6.9e-15
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.775	0.561	0.284	7e-15
TAIR|locus:2167923	348	NAC101 "NAC-domain protein 101	0.573	0.359	0.338	1.5e-14
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.889	0.723	0.282	1.8e-14
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.573	0.348	0.304	1.9e-14

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 4.2e-16, P = 4.2e-16
 Identities = 63/207 (30%), Positives = 97/207 (46%)

Query:     2 QGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQI--WRQ 59
             +G+   L  G +F P+DE+LV +YL  KI   P  F  D +   ++Y   EPW +    +
Sbjct:     3 RGSVTSLAPGFRFHPTDEELVRYYLKRKICNKPFKF--DAISVTDVY-KSEPWDLPDKSR 59

Query:    60 FGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKR 119
                RDLE     YFF+ L KK  NGS+ +R    G W+     + ++  N  K +G KK 
Sbjct:    60 LKSRDLE----WYFFSMLDKKYRNGSKTNRATEMGYWKTTGKDREIL--NGSKVVGMKKT 113

Query:   120 FRYEKDQSPHN--CCWILHEYXXXXXXXXXXXXXXD-LVLCRI-RKNGEPAAAGQKTPRK 175
               Y K ++P      W++HEY              D  VLCRI +K+G    +G   P+ 
Sbjct:   114 LVYHKGRAPRGERTNWVMHEYRLVDQDLDKTGVHQDAFVLCRIFQKSG----SG---PKN 166

Query:   176 KRKLDEPVVEEDIDQPAEPVVVEGHQN 202
               +   P VEE+ ++  +   V   ++
Sbjct:   167 GEQYGAPFVEEEWEEEDDMTFVPDQED 193

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 64/205 (31%), Positives = 95/205 (46%)

Query:     2 QGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQI--WRQ 59
             +G+   L  G +F P+DE+LV +YL  K+   P  F  D +   ++Y   EPW +    +
Sbjct:     3 RGSVTSLAPGFRFHPTDEELVRYYLKRKVCNKPFKF--DAISVTDIY-KSEPWDLPDKSK 59

Query:    60 FGVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKR 119
                RDLE     YFF+ L KK  NGS+ +R    G W+    GK    RN  + +G KK 
Sbjct:    60 LKSRDLE----WYFFSMLDKKYSNGSKTNRATEKGYWK--TTGKDREIRNGSRVVGMKKT 113

Query:   120 FRYEKDQSPHN--CCWILHEYXXXXXXXXXXXXXXDL-VLCRI-RKNGEPAAAGQKTPRK 175
               Y K ++P      W++HEY              +  VLCRI +K+G     G++    
Sbjct:   114 LVYHKGRAPRGERTNWVMHEYRLSDEDLKKAGVPQEAYVLCRIFQKSGTGPKNGEQYGAP 173

Query:   176 KRKLDEPVVEEDIDQ-PAEPVVVEG 199
                L+E   E+ +   PA+    EG
Sbjct:   174 Y--LEEEWEEDGMTYVPAQDAFSEG 196

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 46/160 (28%), Positives = 78/160 (48%)

Query:     8 LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNK-EPWQIWRQFGVRDLE 66
             LP G +F P+DE+L+ +YL NKI+     F    +   +L  NK EPW++  +  +    
Sbjct:    16 LPPGFRFHPTDEELISYYLVNKIADQN--FTGKAIADVDL--NKSEPWELPEKAKM---- 67

Query:    67 DGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQ 126
              G++ YFF+   +K   G R +R   TG W+     K + +  + + +G KK   + + +
Sbjct:    68 GGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGR 127

Query:   127 SPHN--CCWILHEYXXXXXXXXXXXXXXDLVLCRIRKNGE 164
             +P     CW++HEY              + V+CR+ K  E
Sbjct:   128 APRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTE 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2122804 NAC070 "NAC domain containing protein 70" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 4.8e-15, P = 4.8e-15
 Identities = 54/161 (33%), Positives = 79/161 (49%)

Query:     8 LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNK-EPWQIWRQFGVRDLE 66
             +P G +F P+DE+L+ +YL  KIS     F  + +R  +L  NK EPW +  +  +    
Sbjct:     9 VPPGFRFHPTDEELLHYYLKKKISYQK--FEMEVIREVDL--NKLEPWDLQERCKIGSTP 64

Query:    67 DGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQ 126
               E  YFF+   +K   GSR +R    G W+     K +  RNS KKIG +K   + K +
Sbjct:    65 QNE-WYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCI--RNSYKKIGMRKTLVFYKGR 121

Query:   127 SPHN--CCWILHEYXXXXXXXXXXXXXXD-LVLCRI--RKN 162
             +PH     WI+HEY              D  V+CR+  +KN
Sbjct:   122 APHGQKTDWIMHEYRLEDADDPQANPSEDGWVVCRVFMKKN 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=IEP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2016049 VND7 "vascular related NAC-domain protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 6.3e-15, P = 6.3e-15
 Identities = 50/140 (35%), Positives = 75/140 (53%)

Query:     1 MQGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQF 60
             MQ + PP   G +F P++E+LV +YL  KI+   +  LD  V  + LY   EPW I  + 
Sbjct:     5 MQSSMPP---GFRFHPTEEELVGYYLDRKINSMKSA-LDVIVEID-LY-KMEPWDIQARC 58

Query:    61 GVRDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRF 120
              +   E+  + YFF+   +K   G+R +R    G W+     KAV+S+NS   IG +K  
Sbjct:    59 KL-GYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNS--VIGMRKTL 115

Query:   121 RYEKDQSPHN--CCWILHEY 138
              Y K ++P+     WI+HEY
Sbjct:   116 VYYKGRAPNGRKSDWIMHEY 135

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP;TAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2179877 NAC083 "NAC domain containing protein 83" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 49/154 (31%), Positives = 74/154 (48%)

Query:     8 LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
             LP G +F P+DE+LV+ YL  K+  +P P     +  E      +PW +       +LE 
Sbjct:    14 LPPGFRFHPTDEELVVQYLKRKVCSSPLPAS---IIPEFDVCRADPWDL-----PGNLE- 64

Query:    68 GEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQS 127
              ++ YFF+  + K  NG+R +R  G+G W+     K VV+    + +G KK   + K + 
Sbjct:    65 -KERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKP 123

Query:   128 PHNCC--WILHEYXXXXXXXXXXXXXXDLVLCRI 159
             PH     WI+HEY              + VLCRI
Sbjct:   124 PHGSRTDWIMHEYRLSSSPPSSMGPTQNWVLCRI 157

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010150 "leaf senescence" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 7.0e-15, P = 7.0e-15
 Identities = 53/186 (28%), Positives = 86/186 (46%)

Query:     8 LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
             LP G +F P+DE+LV +YL  K++G       + +   +LY   EPW +      +    
Sbjct:     6 LPPGFRFHPTDEELVAYYLDRKVNGQAIEL--EIIPEVDLY-KCEPWDLPE----KSFLP 58

Query:    68 GEDL--YFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKD 125
             G D+  YF++   KK  NGSR +R    G W+     + V S+  + K+G KK   Y + 
Sbjct:    59 GNDMEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESK--KMKMGMKKTLVYYRG 116

Query:   126 QSPHNCC--WILHEYXXXXXXXXXXXXXXDLVLCRI-RKNGE-PAAAGQKTPRKKRKLDE 181
             ++PH     W++HEY                 LCR+ +KN + P   G++   ++     
Sbjct:   117 RAPHGLRTNWVMHEYRLTHAPSSSLKESY--ALCRVFKKNIQIPKRKGEEEEAEEESTSV 174

Query:   182 PVVEED 187
                EE+
Sbjct:   175 GKEEEE 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2167923 NAC101 "NAC-domain protein 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 190 (71.9 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 45/133 (33%), Positives = 74/133 (55%)

Query:     8 LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
             +P G +F P+DE+LV +YL NK++  P   +D  ++  +LY   EPW I    G R   +
Sbjct:     7 IPPGYRFHPTDEELVDYYLKNKVA-FPGMQVD-VIKDVDLY-KIEPWDIQELCG-RGTGE 62

Query:    68 GEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQS 127
               + YFF+   KK   G+R +R  G+G W+     KA+ S+  ++ +G +K   + K ++
Sbjct:    63 EREWYFFSHKDKKYPTGTRTNRATGSGFWKATGRDKAIYSK--QELVGMRKTLVFYKGRA 120

Query:   128 PHN--CCWILHEY 138
             P+     WI+HEY
Sbjct:   121 PNGQKSDWIMHEY 133

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP;RCA

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 63/223 (28%), Positives = 102/223 (45%)

Query:     2 QGTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFG 61
             Q T PP   G +F P+DE+L+++YL N+    P P     +   ++Y   +PWQ+  +  
Sbjct:     6 QSTLPP---GFRFHPTDEELIVYYLRNQTMSKPCPV--SIIPEVDIY-KFDPWQLPEK-- 57

Query:    62 VRDLEDGE-DLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRF 120
                 E GE + YFF+  ++K  NG R +R   +G W+     KA+ S +S   +G KK  
Sbjct:    58 ---TEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKAL 112

Query:   121 RYEKDQSPHNCC--WILHEYXXXXXXXXXXXXXXDL-----VLCRIRKNGEPAAAGQKTP 173
              + K + P      WI+HEY               +     VLCRI K      A +   
Sbjct:   113 VFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKK---RGASKLLN 169

Query:   174 RKKRKLDEPVVEEDIDQPAEPVVVEGHQNQYLQETQPQTSTEL 216
              ++  +DE ++E++       VVV   + +  +E    TS +L
Sbjct:   170 EQEGFMDEVLMEDETK-----VVVNEAERRTEEEIMMMTSMKL 207

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 43/141 (30%), Positives = 69/141 (48%)

Query:     5 RPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQ--FGV 62
             R  LP G +F P+DE+L+L YL  K+S +P P     +   ++Y   +PW +  +  FG 
Sbjct:     7 RSSLPPGFRFHPTDEELILHYLRKKVSSSPVPL--SIIADVDIY-KSDPWDLPAKAPFGE 63

Query:    63 RDLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSR---KKIGSKKR 119
             ++       YFF+   +K  NG+R +R   +G W+     K +   N     + IG KK 
Sbjct:    64 KEW------YFFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKA 117

Query:   120 FRYEKDQSPHNCC--WILHEY 138
               + + + P      WI+HEY
Sbjct:   118 LVFYRGKPPKGVKTNWIMHEY 138

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	218
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	4e-27

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =   99 bits (250), Expect = 4e-27
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 12/137 (8%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
           LP G +F P+DE+LV++YL  K+ G P P L D +   ++Y   EPW +      +    
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLP-LLDVIPEVDIY-KFEPWDL---PDGKAKGG 55

Query: 68  GEDLYFFTRLKKKSVNGSRIDRRVGTGTW--QGEDAGKAVVSRNSRKKIGSKKRFRYEKD 125
             + YFF+   +K  NGSR +R  G+G W   G+D  K V+S+     +G KK   + K 
Sbjct: 56  DREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKD--KPVLSKGGE-VVGMKKTLVFYKG 112

Query: 126 QSPH--NCCWILHEYSL 140
           ++P      W++HEY L
Sbjct: 113 RAPKGEKTDWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	218
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=9e-45  Score=285.20  Aligned_cols=127  Identities=38%  Similarity=0.727  Sum_probs=92.5

Q ss_pred             CCCCCccCCCHHHHHHHHHhhhhcCCCCCCCCCcccccCCCCCCCCCchhhhcccccCCCCceEEEEEecccccCCCCcc
Q 045647            8 LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVNGSRI   87 (218)
Q Consensus         8 LppGfRF~PTDeELV~~YL~~Ki~g~~~p~~~~ii~~~DvY~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~kk~~~g~R~   87 (218)
                      |||||||+|||+|||.+||++|+.|.+++.. .+|+++|||+ +|||+|+...    ..++++||||+++++++.++.|.
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~-~~i~~~Diy~-~~P~~L~~~~----~~~~~~~yFF~~~~~~~~~~~r~   74 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCE-DVIHDVDIYS-AHPWELPAKF----KGGDEEWYFFSPRKKKYPNGGRP   74 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS--CHSEE--GGG-S-GGGCHHHS----SS-SSEEEEEEE----------S
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcc-cceeecccCc-cChHHhhhhc----cCCCceEEEEEecccccCCcccc
Confidence            8999999999999999999999999998875 4677779999 8999999532    23567999999999999999999


Q ss_pred             cccccCceeeecCCCceEEeCCCCeEEeeEEeEeeecCCCC--CCcCeEEEEEEeC
Q 045647           88 DRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSP--HNCCWILHEYSLN  141 (218)
Q Consensus        88 ~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kktl~f~~g~~~--~~T~WvM~EY~l~  141 (218)
                      +|++++|+||++|+.+.|.+. ++++||+|++|+||.++.+  .+|+|+||||+|.
T Consensus        75 ~R~~~~G~Wk~~g~~~~i~~~-~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   75 NRVTGGGYWKSTGKEKPIKDP-GGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             -EEETTEEEEEECEEEEEEE--TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cccccceEEeecccccccccc-cceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            999999999999999999875 8899999999999976554  4899999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	218
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		3e-11
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-10
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		3e-10

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 8   LPLGCKFQPSDEQLVLFYLFNKISG--TPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDL 65
           LP G +F P+D++LV  YL  K +G   P P + +     +LY   +PW +      R L
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEV----DLY-KFDPWDL----PERAL 65
Query: 66  EDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKD 125
               + YFFT   +K  NGSR +R  G G W+   A K V  R   + +G KK   +   
Sbjct: 66  FGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG--RTLGIKKALVFYAG 123
Query: 126 QSPHNCC--WILHEY 138
           ++P      WI+HEY
Sbjct: 124 KAPRGVKTDWIMHEY 138

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 4   TRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVR 63
           T+  LP G +F P+DE+L++ YL  K +G    F    +   +LY   +PW +      +
Sbjct: 16  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLY-KFDPWVL----PNK 68
Query: 64  DLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYE 123
            L   ++ YFF+   +K  NGSR +R  G+G W+     K + +   R  +G KK   + 
Sbjct: 69  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR--VGIKKALVFY 126
Query: 124 KDQSPHNC--CWILHEYXXXX-XXXXXXXXXXDLVLCRIRKNGEPA 166
             ++P      WI+HEY               D VLCRI K    A
Sbjct: 127 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSA 172

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 4   TRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVR 63
           T+  LP G +F P+DE+L++ YL  K +G    F    +   +LY   +PW +      +
Sbjct: 13  TQLSLPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLY-KFDPWVL----PNK 65
Query: 64  DLEDGEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYE 123
            L   ++ YFF+   +K  NGSR +R  G+G W+     K + +   R  +G KK   + 
Sbjct: 66  ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR--VGIKKALVFY 123
Query: 124 KDQSPHNC--CWILHEYXXXX-XXXXXXXXXXDLVLCRIRKNGEPA 166
             ++P      WI+HEY               D VLCRI K    A
Sbjct: 124 IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSA 169
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	218
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	2e-24
1ut7_A	171	No apical meristem protein; transcription regulati	1e-23
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score = 94.3 bits (235), Expect = 2e-24
 Identities = 54/166 (32%), Positives = 75/166 (45%), Gaps = 18/166 (10%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
           LP G +F P+D++LV  YL  K +G   P     +   +LY   +PW +      R L  
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLY-KFDPWDL----PERALFG 67

Query: 68  GEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQS 127
             + YFFT   +K  NGSR +R  G G W+   A K V  R   + +G KK   +   ++
Sbjct: 68  AREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRG--RTLGIKKALVFYAGKA 125

Query: 128 PHNC--CWILHEYSLNPLQLPQN------LQSSDLVLCRI-RKNGE 164
           P      WI+HEY L              L+  D VLCR+  K  E
Sbjct: 126 PRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNE 171

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score = 92.0 bits (229), Expect = 1e-23
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
           LP G +F P+DE+L++ YL  K +G         +   +LY   +PW +  +    + E 
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLY-KFDPWVLPNKALFGEKE- 72

Query: 68  GEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQS 127
               YFF+   +K  NGSR +R  G+G W+     K + +    +++G KK   +   ++
Sbjct: 73  ---WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKA 127

Query: 128 PHNC--CWILHEYSLNPLQLPQN-LQSSDLVLCRI-RKNG 163
           P      WI+HEY L          +  D VLCRI +K  
Sbjct: 128 PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQS 167

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 29/174 (16%), Positives = 64/174 (36%), Gaps = 38/174 (21%)

Query: 40  DFVRTENLYGNKEPWQIWRQFGVRDLE--DGEDLYFFTR--LKKKSVN-----GSRIDR- 89
           DF   E+ Y  K+   ++    V + +  D +D     +  L K+ ++        +   
Sbjct: 8   DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQD---MPKSILSKEEIDHIIMSKDAVSGT 64

Query: 90  -RVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPHNCCWILHEYSLNPLQLPQN 148
            R+    W      + +V           ++F  E  +  +   +++        Q P +
Sbjct: 65  LRL---FWTLLSKQEEMV-----------QKFVEEVLRINYK--FLMSPIKTEQRQ-P-S 106

Query: 149 LQSSDLVLCRIR-KNGEPAAAGQKTPRKK--RKLDEPVVEEDIDQPAEPVVVEG 199
           + +   +  R R  N     A     R +   KL + ++E    +PA+ V+++G
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE---LRPAKNVLIDG 157

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	218
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3.6e-57  Score=371.25  Aligned_cols=152  Identities=32%  Similarity=0.613  Sum_probs=127.6

Q ss_pred             CCCCCCCCCCccCCCHHHHHHHHHhhhhcCCCCCCCCCcccccCCCCCCCCCchhhhcccccCCCCceEEEEEecccccC
Q 045647            3 GTRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSV   82 (218)
Q Consensus         3 ~~~~~LppGfRF~PTDeELV~~YL~~Ki~g~~~p~~~~ii~~~DvY~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~kk~~   82 (218)
                      .....|||||||||||||||.|||++|+.|.+++.  .+|.++|||+ +|||+||+.+.    .++.+|||||++++||+
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~--~~I~evDvy~-~~Pw~Lp~~~~----~g~~ewYFFs~r~~ky~   82 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLYK-FDPWDLPERAL----FGAREWYFFTPRDRKYP   82 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSS--SCCEECCGGG-SCGGGSGGGCS----SCSSEEEEEEECCC---
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCc--Ceeeeccccc-CCchhhhhhhc----cCCceEEEEeccccccC
Confidence            45678999999999999999999999999999986  3666679999 99999998742    45679999999999999


Q ss_pred             CCCcccccccCceeeecCCCceEEeCCCCeEEeeEEeEeeecCCCCC--CcCeEEEEEEeCCCCCCC------CCCCCCe
Q 045647           83 NGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPH--NCCWILHEYSLNPLQLPQ------NLQSSDL  154 (218)
Q Consensus        83 ~g~R~~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kktl~f~~g~~~~--~T~WvM~EY~l~~~~~~~------~~~~~~~  154 (218)
                      +|.|++|++++||||+||+++.|.+  +|++||+||+|+||.|+++.  +|+|+||||+|.+.....      ....++|
T Consensus        83 ~g~R~nR~t~~G~WkatG~dk~I~~--~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~w  160 (174)
T 3ulx_A           83 NGSRPNRAAGNGYWKATGADKPVAP--RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDW  160 (174)
T ss_dssp             --CCSCEEETTEEEEECSCCEEECC--SSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSE
T ss_pred             CCCCceeecCCceEccCCCCcEEee--CCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCE
Confidence            9999999999999999999999975  47999999999999998875  899999999999874321      1346899


Q ss_pred             EEEEEEecC
Q 045647          155 VLCRIRKNG  163 (218)
Q Consensus       155 VLCrI~~k~  163 (218)
                      ||||||+|.
T Consensus       161 VlCrvf~K~  169 (174)
T 3ulx_A          161 VLCRLYNKK  169 (174)
T ss_dssp             EEEEEEESC
T ss_pred             EEEEEEEcC
Confidence            999999885

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.5e-56  Score=367.03  Aligned_cols=152  Identities=32%  Similarity=0.604  Sum_probs=124.2

Q ss_pred             CCCCCCCCCccCCCHHHHHHHHHhhhhcCCCCCCCCCcccccCCCCCCCCCchhhhcccccCCCCceEEEEEecccccCC
Q 045647            4 TRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVN   83 (218)
Q Consensus         4 ~~~~LppGfRF~PTDeELV~~YL~~Ki~g~~~p~~~~ii~~~DvY~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~kk~~~   83 (218)
                      ....|||||||||||||||.|||++|+.|.+++.  .+|.++|||+ +|||+||+.+    ..++++|||||++++|+++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~--~~I~e~Diy~-~~Pw~Lp~~~----~~g~~ewyFFs~r~~k~~~   85 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL--QLIAEIDLYK-FDPWVLPNKA----LFGEKEWYFFSPRDRKYPN   85 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS--CCSEECCGGG-SCGGGHHHHS----SSCSSEEEEEEECCC----
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCC--CeEeeccccc-CChhHhhchh----hcCCccEEEEeccccccCC
Confidence            3568999999999999999999999999999985  4666679999 9999999874    2457899999999999999


Q ss_pred             CCcccccccCceeeecCCCceEEeCCCCeEEeeEEeEeeecCCCCC--CcCeEEEEEEeCCCCCCC-CCCCCCeEEEEEE
Q 045647           84 GSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPH--NCCWILHEYSLNPLQLPQ-NLQSSDLVLCRIR  160 (218)
Q Consensus        84 g~R~~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kktl~f~~g~~~~--~T~WvM~EY~l~~~~~~~-~~~~~~~VLCrI~  160 (218)
                      |.|++|+|++||||+||+++.|.+  ++++||+||+|+||.|+++.  +|+|+||||+|.+..... ....++|||||||
T Consensus        86 g~R~~R~t~~G~Wk~tG~~k~I~~--~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~  163 (171)
T 1ut7_A           86 GSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY  163 (171)
T ss_dssp             ---CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEE
T ss_pred             CCcccccCCCCEEeccCCCceEEe--cCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEE
Confidence            999999999999999999999987  46999999999999998865  899999999999874221 2356899999999


Q ss_pred             ecCC
Q 045647          161 KNGE  164 (218)
Q Consensus       161 ~k~~  164 (218)
                      +|..
T Consensus       164 ~k~~  167 (171)
T 1ut7_A          164 KKQS  167 (171)
T ss_dssp             ECC-
T ss_pred             EcCC
Confidence            9974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	218
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-31

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  110 bits (277), Expect = 2e-31
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 8   LPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLED 67
           LP G +F P+DE+L++ YL  K +G    F    +   +LY   +PW +  +    + E 
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYD--FSLQLIAEIDLY-KFDPWVLPNKALFGEKE- 72

Query: 68  GEDLYFFTRLKKKSVNGSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQS 127
               YFF+   +K  NGSR +R  G+G W+     K + +    +++G KK   +   ++
Sbjct: 73  ---WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEG--QRVGIKKALVFYIGKA 127

Query: 128 P--HNCCWILHEYSL-NPLQLPQNLQSSDLVLCRIRK 161
           P      WI+HEY L  P +   + +  D VLCRI K
Sbjct: 128 PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYK 164

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	218
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.4e-53  Score=346.30  Aligned_cols=151  Identities=32%  Similarity=0.602  Sum_probs=122.9

Q ss_pred             CCCCCCCCCccCCCHHHHHHHHHhhhhcCCCCCCCCCcccccCCCCCCCCCchhhhcccccCCCCceEEEEEecccccCC
Q 045647            4 TRPPLPLGCKFQPSDEQLVLFYLFNKISGTPAPFLDDFVRTENLYGNKEPWQIWRQFGVRDLEDGEDLYFFTRLKKKSVN   83 (218)
Q Consensus         4 ~~~~LppGfRF~PTDeELV~~YL~~Ki~g~~~p~~~~ii~~~DvY~~~~Pw~L~~~~~~~~~~~~~~wyFFs~~~kk~~~   83 (218)
                      ...+|||||||+|||||||.+||++|+.|.+++..  +|.++|||+ +|||+||+.+    ..++++||||+++.+++++
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~--~I~~~Dvy~-~~Pw~Lp~~~----~~~~~~wyFft~~~~k~~~   85 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYK-FDPWVLPNKA----LFGEKEWYFFSPRDRKYPN   85 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSC--CSEECCGGG-SCGGGHHHHS----SSCSSEEEEEEECCC----
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcc--cceeccCCc-CChhhccchh----ccCcceEEEEeeeccccCC
Confidence            56789999999999999999999999999999863  566679998 9999999864    2457789999999999999


Q ss_pred             CCcccccccCceeeecCCCceEEeCCCCeEEeeEEeEeeecCCCCC--CcCeEEEEEEeCCCCCCC-CCCCCCeEEEEEE
Q 045647           84 GSRIDRRVGTGTWQGEDAGKAVVSRNSRKKIGSKKRFRYEKDQSPH--NCCWILHEYSLNPLQLPQ-NLQSSDLVLCRIR  160 (218)
Q Consensus        84 g~R~~R~~~~G~Wk~~g~~k~I~~~~~g~~vG~kktl~f~~g~~~~--~T~WvM~EY~l~~~~~~~-~~~~~~~VLCrI~  160 (218)
                      |.|.+|++++|+||++|+++.|.+  +|.+||+||+|+||.++++.  +|+|+||||+|.+..... ....++|||||||
T Consensus        86 g~r~~R~~g~G~Wk~~g~~~~i~~--~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~  163 (166)
T d1ut7a_          86 GSRPNRVAGSGYWKATGTDKIIST--EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIY  163 (166)
T ss_dssp             ---CCEEETTEEEEEEEEEEEEEE--TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEE
T ss_pred             CCccccccCCCEecccCCCceEec--CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEE
Confidence            999999999999999999988875  68999999999999988765  899999999998874332 2456799999999


Q ss_pred             ecC
Q 045647          161 KNG  163 (218)
Q Consensus       161 ~k~  163 (218)
                      +|.
T Consensus       164 ~Kk  166 (166)
T d1ut7a_         164 KKQ  166 (166)
T ss_dssp             ECC
T ss_pred             ecC
Confidence            873