Citrus Sinensis ID: 045654

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------
Protein Sequence
MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMESL
Secondary Structure (PSIPRED)
ccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHccEEEEccccHHHccccccEEEEcccccHHHHccccHHHHHHcccccccccccHHHHHHHHHHcccEEEEEEccHHcHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHccccccccccccEEEccccccHHHHHHHHHHHHHHEHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHcc
Coil and Loop (DISEMBL)
mestsvpfagydfvsvpiivplfrpifsptkppsslpfdqvpgiANWVLSFFAHKVFVAFnsttecfsrkdkcvacgnpvrLSLMTYVSKVVARLNFFSrveeggrgkcedgmllekhnllIIWPTGIEAFKEMESL
Flexible Loop (DISEMBL)
mestsvpfagydfVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSttecfsrkdkCVACGNPVRLSLMTYVSKVVARLNFFsrveeggrgkcedgmlleKHNLLIIWPTGIEAFKEMESL
Low Complexity Region (SEG)
MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMESL
Disordered region (IsUnstruct)
******PFAGYDFVSVPIIVPLFRPIFSPT*****LPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAF******
Disordered Region (DISOPRED)
******P*AGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMT*********NFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMESL
Disordered Region (DISEMBL)
MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMESL
Disordered Region (DISPRO)
*********GYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMES*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMESL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	137	2.2.26 [Sep-21-2011]
B0S0Z5	370	UDP-N-acetylglucosamine--	yes	no	0.452	0.167	0.347	9e-06
A8F4X1	339	UDP-N-acetylglucosamine--	yes	no	0.299	0.120	0.534	9e-05
A4XI04	370	UDP-N-acetylglucosamine--	yes	no	0.335	0.124	0.369	0.0003
B0K3H0	364	UDP-N-acetylglucosamine--	yes	no	0.423	0.159	0.372	0.0005
B0K8K7	364	UDP-N-acetylglucosamine--	yes	no	0.423	0.159	0.372	0.0005
A3DE27	369	UDP-N-acetylglucosamine--	yes	no	0.379	0.140	0.415	0.0006
B2V7Y8	347	UDP-N-acetylglucosamine--	yes	no	0.620	0.244	0.315	0.0008

>sp|B0S0Z5|MURG_FINM2 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Finegoldia magna (strain ATCC 29328) GN=murG PE=3 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 10/72 (13%)

Query: 13  FVSVPIIVPLFRPIFSPTKPPSSLPFDQV---PGIANWVLSFFAHKVFVAFNSTTECFSR 69
           +VS PI+       +  TK  + + F +    PGI N +LS +  K FV F  + + F  
Sbjct: 102 YVSGPIL-------YKATKTKAKVAFHEQNSFPGITNRILSRYVDKYFVTFKESIKYFKN 154

Query: 70  KDKCVACGNPVR 81
           +DK V  GNP+R
Sbjct: 155 QDKAVVTGNPIR 166

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).
Finegoldia magna (strain ATCC 29328) (taxid: 334413)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 2EC: 2EC: 7

>sp|A8F4X1|MURG_THELT UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=murG PE=3 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 2/43 (4%)

Query: 41  VPGIANWVLSFFAHKVFVAFNSTTECF--SRKDKCVACGNPVR 81
           VPG+AN  LS  A K+FVAF+ T E F  S ++K +  GNPVR
Sbjct: 126 VPGLANKALSLSAKKIFVAFDKTVEFFPKSVRNKILVTGNPVR 168

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) (taxid: 416591)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 7

>sp|A4XI04|MURG_CALS8 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=murG PE=3 SV=1

 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 28/46 (60%)

Query: 42  PGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTY 87
           PG+AN ++S F  K+ ++F  +   F   +K V  GNPVRL + ++
Sbjct: 132 PGLANKIISRFCEKILISFEESKRFFKNSNKVVLTGNPVRLEIFSH 177

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) (taxid: 351627)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 7

>sp|B0K3H0|MURG_THEPX UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Thermoanaerobacter sp. (strain X514) GN=murG PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 42  PGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKV-VARLNFFS 99
           PG+ N VLS F   V V+F  + + F  K+K V  GNP+R  L+    +  +  L F+S
Sbjct: 127 PGLTNKVLSRFVKVVAVSFEESVKYFKNKEKVVVTGNPIRRELLKVTKEEGLKNLGFYS 185

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

Thermoanaerobacter sp. (strain X514) (taxid: 399726)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 7

>sp|B0K8K7|MURG_THEP3 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=murG PE=3 SV=1

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 42  PGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKV-VARLNFFS 99
           PG+ N VLS F   V V+F  + + F  K+K V  GNP+R  L+    +  +  L F+S
Sbjct: 127 PGLTNKVLSRFVKVVAVSFEESVKYFKNKEKVVVTGNPIRRELLKVTKEEGLKNLGFYS 185

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (taxid: 340099)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 7

>sp|A3DE27|MURG_CLOTH UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=murG PE=3 SV=1

 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 42  PGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVAR 94
           PG+ N +LS F  +V ++F    + F  K K V  GNP+R S M  VS+  AR
Sbjct: 127 PGVTNKILSKFVDRVAISFKEAEKYFKDKSKVVFTGNPIR-SEMLEVSRETAR 178

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

Clostridium thermocellum (strain ATCC 27405 / DSM 1237) (taxid: 203119)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 7

>sp|B2V7Y8|MURG_SULSY UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=murG PE=3 SV=1

 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 7/92 (7%)

Query: 5   SVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFVAFNSTT 64
           S+ F GY        +PL    F    P      + +P  +N +LS+FA KVF+ F  T 
Sbjct: 94  SICFGGY------TSIPLGLASFLARVPLYIHEQNSIPSYSNKILSYFAKKVFITFELTA 147

Query: 65  ECFSRKDKCVACGNPVRLSLMTYVSKVVARLN 96
           + F RK K V  G P+R +++      V + N
Sbjct: 148 KYFDRK-KTVLTGMPLRKNIIERAKNYVYKPN 178

Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc-(pentapeptide)GlcNAc (lipid intermediate II).

Sulfurihydrogenibium sp. (strain YO3AOP1) (taxid: 436114)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 2

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
297734253	436	unnamed protein product [Vitis vinifera]	0.985	0.309	0.404	4e-24
225456027	431	PREDICTED: UDP-N-acetylglucosamine--N-ac	0.985	0.313	0.404	4e-24
255567808	437	UDP-N-acetylglucosamine--N-acetylmuramyl	0.978	0.306	0.385	6e-23
224118766	402	predicted protein [Populus trichocarpa]	0.992	0.338	0.383	1e-22
449439431	443	PREDICTED: UDP-N-acetylglucosamine--N-ac	0.956	0.295	0.382	3e-22
449521029	443	PREDICTED: UDP-N-acetylglucosamine--N-ac	0.956	0.295	0.382	3e-22
356527867	389	PREDICTED: LOW QUALITY PROTEIN: UDP-N-ac	0.715	0.251	0.480	4e-17
356511279	405	PREDICTED: UDP-N-acetylglucosamine--N-ac	0.715	0.241	0.444	2e-16
15219542	431	UDP-N-acetylglucosamine--N-acetylmuramyl	0.722	0.229	0.385	1e-13
297839243	435	glycosyl transferase family 28 protein [	0.722	0.227	0.377	5e-13

>gi|297734253|emb|CBI15500.3| unnamed protein product [Vitis vinifera]

 Score =  116 bits (290), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 96/205 (46%), Gaps = 70/205 (34%)

Query: 1   MESTSVPFAGYDFVSVPIIVPLFRPIFSP------------------------------T 30
           MEST+VP AGYDF S+P  V L RPIFSP                              T
Sbjct: 102 MESTAVPSAGYDFDSIPA-VRLARPIFSPQNILLPYRLIKSMVQCYRRLRDFDPDIVVGT 160

Query: 31  KPPSSLPF----------------DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCV 74
               S P                 + VPGIANWVLS+FA +VFVAFNS+ + F  K KC+
Sbjct: 161 GGYVSFPVCLAAALKGLKLVIQEQNSVPGIANWVLSWFADQVFVAFNSSIDYFP-KHKCI 219

Query: 75  ACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCE----------------------DG 112
             GNPVRLS+  YVSK  ARL+FF      G  + +                        
Sbjct: 220 VSGNPVRLSVRRYVSKAAARLHFFPSYVNSGNLEAKVVLVLGGSLGANAINIAMLNLYYQ 279

Query: 113 MLLEKHNLLIIWPTGIEAFKEMESL 137
           MLLE  NL IIW TG+EAF EMESL
Sbjct: 280 MLLEHKNLFIIWQTGVEAFDEMESL 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456027|ref|XP_002277203.1| PREDICTED: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like [Vitis vinifera]

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 96/205 (46%), Gaps = 70/205 (34%)

Query: 1   MESTSVPFAGYDFVSVPIIVPLFRPIFSP------------------------------T 30
           MEST+VP AGYDF S+P  V L RPIFSP                              T
Sbjct: 97  MESTAVPSAGYDFDSIPA-VRLARPIFSPQNILLPYRLIKSMVQCYRRLRDFDPDIVVGT 155

Query: 31  KPPSSLPF----------------DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCV 74
               S P                 + VPGIANWVLS+FA +VFVAFNS+ + F  K KC+
Sbjct: 156 GGYVSFPVCLAAALKGLKLVIQEQNSVPGIANWVLSWFADQVFVAFNSSIDYFP-KHKCI 214

Query: 75  ACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCE----------------------DG 112
             GNPVRLS+  YVSK  ARL+FF      G  + +                        
Sbjct: 215 VSGNPVRLSVRRYVSKAAARLHFFPSYVNSGNLEAKVVLVLGGSLGANAINIAMLNLYYQ 274

Query: 113 MLLEKHNLLIIWPTGIEAFKEMESL 137
           MLLE  NL IIW TG+EAF EMESL
Sbjct: 275 MLLEHKNLFIIWQTGVEAFDEMESL 299

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567808|ref|XP_002524882.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative [Ricinus communis] gi|223535845|gb|EEF37506.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative [Ricinus communis]

 Score =  112 bits (279), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/205 (38%), Positives = 92/205 (44%), Gaps = 71/205 (34%)

Query: 1   MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKPPSSLPF---------------------- 38
           MES S+P AGY F S+P  V L RP+F  T    SLP+                      
Sbjct: 104 MESASIPSAGYAFSSIPP-VKLHRPLF--TLQNLSLPYHLIQSTIRSFKLLKEFNPDIVI 160

Query: 39  --------------------------DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDK 72
                                     + VPGIAN +LS F+  VFVA+NST ECFS+K K
Sbjct: 161 GTGGYVSFPTCLAALLRGIKIVIQEQNSVPGIANSILSSFSEVVFVAYNSTVECFSKKHK 220

Query: 73  CVACGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGK--------------------CEDG 112
           CV  GNPVRLSL   VS+ VAR  FF R    G  K                        
Sbjct: 221 CVVSGNPVRLSLRQSVSQEVARKEFFPRSSGKGEAKVILVLGGSFGANTINIALLNVYSQ 280

Query: 113 MLLEKHNLLIIWPTGIEAFKEMESL 137
           +LL+  N LIIW TG+EAF EMESL
Sbjct: 281 LLLQHKNWLIIWQTGVEAFNEMESL 305

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224118766|ref|XP_002317900.1| predicted protein [Populus trichocarpa] gi|222858573|gb|EEE96120.1| predicted protein [Populus trichocarpa]

 Score =  111 bits (277), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 95/201 (47%), Gaps = 65/201 (32%)

Query: 1   MESTSVPFAGYDFVSVPIIVPLFRPIFS------PTKPPSSL--------PFD------- 39
           MESTS+P AGY F S+P  V LFRP+ S      P     S+         FD       
Sbjct: 73  MESTSIPSAGYPFTSIPP-VKLFRPLVSLENLTLPIHLIHSIIHSFKLLKEFDPHVVIGT 131

Query: 40  -------------------------QVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCV 74
                                     VPGIAN+VLS+F+H VF+++NST ECF +K  CV
Sbjct: 132 GGYVSFPTCLAALLQRTKIVIHEQNSVPGIANYVLSYFSHLVFLSYNSTIECFPKKHNCV 191

Query: 75  ACGNPVRLSLMTYVSKVVARLNFFSRVEE---------GGRG---------KCEDGMLLE 116
             GNPVR+SL  +VS+ VARL FF    E         G  G              MLLE
Sbjct: 192 VTGNPVRVSLRQFVSRAVARLEFFPMAGEEAKVILVLGGSLGANAINIALLNVYSQMLLE 251

Query: 117 KHNLLIIWPTGIEAFKEMESL 137
             +  IIW TG+E++ EMESL
Sbjct: 252 HKDWYIIWQTGVESYNEMESL 272

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439431|ref|XP_004137489.1| PREDICTED: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like [Cucumis sativus]

 Score =  110 bits (274), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 93/209 (44%), Gaps = 78/209 (37%)

Query: 2   ESTSVPFAGYDFVSV-------PIIVP--LFRPI---------------FSP-----TKP 32
           ES +VP AGY+F +V       PII P  L  P+               F P     T  
Sbjct: 105 ESAAVPSAGYEFDTVLASQLAHPIISPQNLLLPLHVIKSVIASYKKLIDFKPHIVIGTGG 164

Query: 33  PSSLPF-----------------DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVA 75
             S P                  + VPG ANWVLS FA  VFV  NST ECF RK KC+ 
Sbjct: 165 YVSFPICLAAKLINGVKLAIQEQNSVPGFANWVLSHFADIVFVVLNSTVECFPRKKKCLV 224

Query: 76  CGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCED------------------------ 111
           CGNPVRL+L  +V K VARL+FF R  +G     ED                        
Sbjct: 225 CGNPVRLTLKQHVPKSVARLHFFPRSRKG-----EDLEAKVLLILGGSLGANAINIAMLN 279

Query: 112 ---GMLLEKHNLLIIWPTGIEAFKEMESL 137
               MLLE  NL IIW TG++ F EM+SL
Sbjct: 280 LYYQMLLENKNLYIIWQTGVKTFDEMDSL 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449521029|ref|XP_004167534.1| PREDICTED: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like [Cucumis sativus]

 Score =  109 bits (273), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 80/209 (38%), Positives = 93/209 (44%), Gaps = 78/209 (37%)

Query: 2   ESTSVPFAGYDFVSV-------PIIVP--LFRPI---------------FSP-----TKP 32
           ES +VP AGY+F +V       PII P  L  P+               F P     T  
Sbjct: 105 ESAAVPSAGYEFDTVLASQLAHPIISPQNLLLPLHVIKSVIASYKKLIDFKPHIVIGTGG 164

Query: 33  PSSLPF-----------------DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVA 75
             S P                  + VPG ANWVLS FA  VFV  NST ECF RK KC+ 
Sbjct: 165 YVSFPICLAAKLINGVKLAIQEQNSVPGFANWVLSHFADIVFVVLNSTVECFPRKKKCLV 224

Query: 76  CGNPVRLSLMTYVSKVVARLNFFSRVEEGGRGKCED------------------------ 111
           CGNPVRL+L  +V K VARL+FF R  +G     ED                        
Sbjct: 225 CGNPVRLTLKQHVPKSVARLHFFPRSRKG-----EDLEAKVLLILGGSLGANAINIAMLN 279

Query: 112 ---GMLLEKHNLLIIWPTGIEAFKEMESL 137
               MLLE  NL IIW TG++ F EM+SL
Sbjct: 280 LYYQMLLENKNLYIIWQTGVKTFDEMDSL 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527867|ref|XP_003532528.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like [Glycine max]

 Score = 92.8 bits (229), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/104 (48%), Positives = 62/104 (59%), Gaps = 6/104 (5%)

Query: 39  DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFF 98
           + VPG AN +LSF A  +FVAFNST + F R +KC+ CGNPVRLS+   VSK  A  +FF
Sbjct: 161 NSVPGFANSLLSFLADAIFVAFNSTLDSFPR-NKCLVCGNPVRLSIRNLVSKATAMSHFF 219

Query: 99  SRV-----EEGGRGKCEDGMLLEKHNLLIIWPTGIEAFKEMESL 137
             V        G       ML +   L +IW TG+EAF EM+SL
Sbjct: 220 PXVVLVLAGTFGANAVNIAMLRQDSGLYVIWQTGVEAFDEMDSL 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511279|ref|XP_003524354.1| PREDICTED: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like [Glycine max]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/117 (44%), Positives = 64/117 (54%), Gaps = 19/117 (16%)

Query: 39  DQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFF 98
           + VPG AN +LSFFA  +FVAFNST + F R +KC  CGNPVRLS+   VSKV A  +FF
Sbjct: 152 NSVPGFANSLLSFFADAIFVAFNSTLDSFPR-NKCFVCGNPVRLSIRNLVSKVTAMSHFF 210

Query: 99  SRVEEGGR------------------GKCEDGMLLEKHNLLIIWPTGIEAFKEMESL 137
              + G R                        ML +   L +IW TG+EAF EM+SL
Sbjct: 211 PGSDSGSRILLVLAGSFGANAVNIAMLNLYYQMLRQDSGLYVIWQTGVEAFDEMDSL 267

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219542|ref|NP_177515.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Arabidopsis thaliana] gi|12324204|gb|AAG52070.1|AC012679_8 putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; 62395-63952 [Arabidopsis thaliana] gi|16648913|gb|AAL24308.1| putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Arabidopsis thaliana] gi|17978719|gb|AAL47353.1| putative UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)- pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Arabidopsis thaliana] gi|332197382|gb|AEE35503.1| UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [Arabidopsis thaliana]

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 39  DQVPGIANWVLSFFAHKVFVAFNSTTECFSRK--DKCVACGNPVRLSLMTYVSKVVARLN 96
           D +PG  NW+LSFFA  +F  FN T     ++   KCV  GNP+R +L  Y SK  AR++
Sbjct: 180 DSIPGTTNWILSFFADTIFAPFNCTVTNLPKRVAAKCVVYGNPIRQTLRRYSSKGAARVS 239

Query: 97  FFSR----VEE--------GGRG---------KCEDGMLLEKHNLLIIWPTGIEAFKEME 135
           FF +    V E        G  G          C   +L E  N   +W TG+EAF EM+
Sbjct: 240 FFGQWAGAVSEPKVVLLLGGSLGANAINIALLNCYSQLLSEHENWFFVWQTGVEAFDEMD 299

Query: 136 SL 137
           SL
Sbjct: 300 SL 301

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839243|ref|XP_002887503.1| glycosyl transferase family 28 protein [Arabidopsis lyrata subsp. lyrata] gi|297333344|gb|EFH63762.1| glycosyl transferase family 28 protein [Arabidopsis lyrata subsp. lyrata]

 Score = 79.0 bits (193), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 23/122 (18%)

Query: 39  DQVPGIANWVLSFFAHKVFVAFNSTTECFSRK--DKCVACGNPVRLSLMTYVSKVVARLN 96
           D +PG  NW+LSFFA  +F  FN T     ++   KCV  GNP+R +L  Y SK  AR++
Sbjct: 181 DSIPGTTNWILSFFADTIFAPFNCTVTNLPKRVAGKCVVYGNPIRQALRRYSSKGAARVS 240

Query: 97  FFSR----VEE--------GGRG---------KCEDGMLLEKHNLLIIWPTGIEAFKEME 135
           FF +    V E        G  G          C   +L E  +   +W TG+EAF EM+
Sbjct: 241 FFGQWAGAVSEAKVVLLLGGSLGANAINIALLNCYSQLLSEHESWFFVWQTGVEAFDEMD 300

Query: 136 SL 137
           SL
Sbjct: 301 SL 302

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	137
TAIR|locus:2027764	431	AT1G73740 [Arabidopsis thalian	0.452	0.143	0.453	2.1e-20

TAIR|locus:2027764 AT1G73740 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 2.1e-20, Sum P(3) = 2.1e-20
 Identities = 29/64 (45%), Positives = 39/64 (60%)

Query:    39 DQVPGIANWVLSFFAHKVFVAFNSTTECFSRK--DKCVACGNPVRLSLMTYVSKVVARLN 96
             D +PG  NW+LSFFA  +F  FN T     ++   KCV  GNP+R +L  Y SK  AR++
Sbjct:   180 DSIPGTTNWILSFFADTIFAPFNCTVTNLPKRVAAKCVVYGNPIRQTLRRYSSKGAARVS 239

Query:    97 FFSR 100
             FF +
Sbjct:   240 FFGQ 243

GO:0005886 "plasma membrane" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0030259 "lipid glycosylation" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	137
cd03785	350	cd03785, GT1_MurG, MurG is an N-acetylglucosaminyl	3e-09
PRK00726	357	PRK00726, murG, undecaprenyldiphospho-muramoylpent	6e-06
TIGR01133	348	TIGR01133, murG, undecaprenyldiphospho-muramoylpen	2e-05
PRK12446	352	PRK12446, PRK12446, undecaprenyldiphospho-muramoyl	0.002
cd00280	200	cd00280, TRFH, Telomeric Repeat binding Factor or	0.004

>gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

 Score = 53.3 bits (129), Expect = 3e-09
 Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)

Query: 41  VPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVR 81
           VPG+AN +L+ FA +V ++F  T + F  KDK V  GNPVR
Sbjct: 123 VPGLANRLLARFADRVALSFPETAKYF-PKDKAVVTGNPVR 162

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 350

>gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

 Score = 43.6 bits (104), Expect = 6e-06
 Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 41  VPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVR 81
           VPG+AN +L+ FA KV  AF      F  K K V  GNPVR
Sbjct: 125 VPGLANKLLARFAKKVATAFPGAFPEF-FKPKAVVTGNPVR 164

Length = 357

>gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 7/60 (11%)

Query: 41  VPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLNFFSR 100
           VPG+ N +LS FA KV ++F    + F    + V  GNPVR  +    S  V R  F  R
Sbjct: 124 VPGLTNKLLSRFAKKVLISFPGAKDHF----EAVLVGNPVRQEIR---SLPVPRERFGLR 176

RM 8449890 RT The final step of peptidoglycan subunit assembly in Escherichia coli occurs in the cytoplasm. RA Bupp K, van Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3 [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. Length = 348

>gnl|CDD|171505 PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 19/83 (22%)

Query: 6   VPFAGYDFVSVPII-------VPLFRPIFSPTKPPSSLPFDQVPGIANWVLSFFAHKVFV 58
           V F+   FVSVP++       VP+   +            D  PG+AN +   FA K+FV
Sbjct: 94  VIFSKGGFVSVPVVIGGWLNRVPVL--LHES---------DMTPGLANKIALRFASKIFV 142

Query: 59  AFNSTTECFSRKDKCVACGNPVR 81
            F    +    K+K +  G+PVR
Sbjct: 143 TFEEAAKHLP-KEKVIYTGSPVR 164

Length = 352

>gnl|CDD|238174 cd00280, TRFH, Telomeric Repeat binding Factor or TTAGGG Repeat binding Factor, central (dimerization) domain Homology; TRFH

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 44  IANWVLSFFAHKVFVAF-NSTTECFSRKDKCVACGNPVRLS-LMTYVSKVVARLNFFSRV 101
              WVL F+ H    AF     E F R+ + +A    V    L     K +  + F SR+
Sbjct: 8   ANRWVLDFYFHSACRAFREGRYEDF-RRTRDIAEALLVGPLKLTATQLKTLRIMQFLSRI 66

Query: 102 EEGGRGKC 109
            EG    C
Sbjct: 67  AEGKNLDC 74

Telomeres are protein/DNA complexes that make up the physical ends of eukaryotic linear chromosomes and are essential for chromosome stability, protecting the chromosome ends from degradation and end-to-end fusion. Proteins TRF1, TRF2 and Taz1 bind telomeric DNA and are also involved in recruiting interacting proteins, TIN2, and Rap1, to the telomeres. It has also been demonstrated that PARP1 associates with TRF2 and is capable of poly(ADP-ribosyl)ation of TRF2, which affects binding of TRF2 to telomeric DNA. TRF1, TRF2 and Taz1 proteins contain three functional domains: an N-terminal acidic domain, a central TRF-specific/dimerization domain, and a C-terminal DNA binding domain with a single Myb-like repeat. Homodimerization, a prerequisite to DNA binding, results in the juxtaposition of two Myb DNA binding domains. Length = 200

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	137
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.91
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.89
TIGR03492	396	conserved hypothetical protein. This protein famil	99.53
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	98.99
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	98.06
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	98.02
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	97.86
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	97.73
PLN02605	382	monogalactosyldiacylglycerol synthase	97.5
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	97.45
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	97.27
PRK14089	347	ipid-A-disaccharide synthase; Provisional	97.19
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	95.07
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	94.3
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	94.11
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	90.44
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	81.84
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	81.19

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.91  E-value=6.6e-25  Score=177.64  Aligned_cols=128  Identities=23%  Similarity=0.298  Sum_probs=103.6

Q ss_pred             CCCCCCCCCCcceEeeeccCCCCCCCCCCCCc------------------------------cccCC-------------
Q 045654            1 MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKP------------------------------PSSLP-------------   37 (137)
Q Consensus         1 ~E~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~------------------------------y~S~P-------------   37 (137)
                      +|.+++|++||+++.++.. +++| ...++++                              |+|+|             
T Consensus        41 ~e~~l~~~~g~~~~~~~~~-~l~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~  118 (352)
T PRK12446         41 IEKTIIEKENIPYYSISSG-KLRR-YFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVL  118 (352)
T ss_pred             cccccCcccCCcEEEEecc-CcCC-CchHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEE
Confidence            5788999999999999998 8876 2233221                              99999             


Q ss_pred             ---CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChhhhhch-----------hcCCCCC
Q 045654           38 ---FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARLN-----------FFSRVEE  103 (137)
Q Consensus        38 ---qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~~a~~~-----------l~g~lgS  103 (137)
                         ||++||++||+++++|+++|++|+++.++++. +|+++||||||++|... +++++++.           ++|  ||
T Consensus       119 i~e~n~~~g~~nr~~~~~a~~v~~~f~~~~~~~~~-~k~~~tG~Pvr~~~~~~-~~~~~~~~~~l~~~~~~iLv~G--GS  194 (352)
T PRK12446        119 LHESDMTPGLANKIALRFASKIFVTFEEAAKHLPK-EKVIYTGSPVREEVLKG-NREKGLAFLGFSRKKPVITIMG--GS  194 (352)
T ss_pred             EECCCCCccHHHHHHHHhhCEEEEEccchhhhCCC-CCeEEECCcCCcccccc-cchHHHHhcCCCCCCcEEEEEC--Cc
Confidence               99999999999999999999999999888987 88999999999998642 23333321           145  89


Q ss_pred             CcHH---HHHHHHHHhc-CCCcEEEEcCCCCHHHh
Q 045654          104 GGRG---KCEDGMLLEK-HNLLIIWPTGIEAFKEM  134 (137)
Q Consensus       104 qGA~---~~v~~~l~~~-~~~~vi~~tG~~~~~~~  134 (137)
                      |||.   +++.++++.. .+++|+||||++++++.
T Consensus       195 ~Ga~~in~~~~~~l~~l~~~~~vv~~~G~~~~~~~  229 (352)
T PRK12446        195 LGAKKINETVREALPELLLKYQIVHLCGKGNLDDS  229 (352)
T ss_pred             cchHHHHHHHHHHHHhhccCcEEEEEeCCchHHHH
Confidence            9997   7788887763 46999999999877764

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=2.1e-23  Score=169.49  Aligned_cols=129  Identities=27%  Similarity=0.271  Sum_probs=105.5

Q ss_pred             CCCCCCCCCCcceEeeeccCCCCCCCCCCCCc------------------------------cccCC-------------
Q 045654            1 MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKP------------------------------PSSLP-------------   37 (137)
Q Consensus         1 ~E~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~------------------------------y~S~P-------------   37 (137)
                      +|..+++..+++++.|++. +++| ...+.++                              |+|+|             
T Consensus        41 ~e~~l~~~~~~~~~~I~~~-~~~~-~~~~~~~~~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~  118 (357)
T COG0707          41 LEAFLVKQYGIEFELIPSG-GLRR-KGSLKLLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVI  118 (357)
T ss_pred             ceeeeccccCceEEEEecc-cccc-cCcHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEE
Confidence            5788999999999999999 9998 4444432                              99999             


Q ss_pred             ---CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChh----hhh----c-hhcCCCCCCc
Q 045654           38 ---FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKV----VAR----L-NFFSRVEEGG  105 (137)
Q Consensus        38 ---qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~----~a~----~-~l~g~lgSqG  105 (137)
                         ||++||+|||+++++|++|+++|++...+++. +++++||||||++|.. ....    ..+    . .++|  ||||
T Consensus       119 ihEqn~~~G~ank~~~~~a~~V~~~f~~~~~~~~~-~~~~~tG~Pvr~~~~~-~~~~~~~~~~~~~~~~ilV~G--GS~G  194 (357)
T COG0707         119 IHEQNAVPGLANKILSKFAKKVASAFPKLEAGVKP-ENVVVTGIPVRPEFEE-LPAAEVRKDGRLDKKTILVTG--GSQG  194 (357)
T ss_pred             EEecCCCcchhHHHhHHhhceeeeccccccccCCC-CceEEecCcccHHhhc-cchhhhhhhccCCCcEEEEEC--Ccch
Confidence               99999999999999999999999987667776 7899999999999975 2111    111    1 1257  9999


Q ss_pred             HH---HHHHHHHHhcC-CCcEEEEcCCCCHHHhh
Q 045654          106 RG---KCEDGMLLEKH-NLLIIWPTGIEAFKEME  135 (137)
Q Consensus       106 A~---~~v~~~l~~~~-~~~vi~~tG~~~~~~~~  135 (137)
                      |.   ++++++++... +++|+||||++++++++
T Consensus       195 a~~ln~~v~~~~~~l~~~~~v~~~~G~~~~~~~~  228 (357)
T COG0707         195 AKALNDLVPEALAKLANRIQVIHQTGKNDLEELK  228 (357)
T ss_pred             hHHHHHHHHHHHHHhhhCeEEEEEcCcchHHHHH
Confidence            98   89999888754 79999999999877664

>TIGR03492 conserved hypothetical protein

Probab=99.53  E-value=2.3e-15  Score=123.84  Aligned_cols=130  Identities=15%  Similarity=0.063  Sum_probs=96.0

Q ss_pred             CCCCCCCCCCcceEeeeccCCCCCCCCCCCCc---------------------------------cc--------cCC--
Q 045654            1 MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKP---------------------------------PS--------SLP--   37 (137)
Q Consensus         1 ~E~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~---------------------------------y~--------S~P--   37 (137)
                      +|++.||..| |++.+|++ ||++. ..++++                                 |+        ..|  
T Consensus        41 ~e~~~ip~~g-~~~~~~sg-g~~~~-~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~  117 (396)
T TIGR03492        41 YQNLGIPIIG-PTKELPSG-GFSYQ-SLRGLLRDLRAGLVGLTLGQWRALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYA  117 (396)
T ss_pred             HhhCCCceeC-CCCCCCCC-CccCC-CHHHHHHHHHhhHHHHHHHHHHHHHHHhhcCCEEEEECcHHHHHHHHHcCCCce
Confidence            5789999999 99999999 99873 222211                                 33        111  


Q ss_pred             ------CCCh----------------hhHH------HHHHhhhcCeEEEcCccCcccccCC-CceeEecccccccccccc
Q 045654           38 ------FDQV----------------PGIA------NWVLSFFAHKVFVAFNSTTECFSRK-DKCVACGNPVRLSLMTYV   88 (137)
Q Consensus        38 ------qNa~----------------pG~a------Nr~l~~~a~~v~~~f~~~~~~l~~~-~k~v~tGnPVR~~~~~~~   88 (137)
                            ||++                ||++      |++++++|+.+|++|+.+.++|.+. .|+++||||+++++....
T Consensus       118 ~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~  197 (396)
T TIGR03492       118 FVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWERWLMRSRRCLAVFVRDRLTARDLRRQGVRASYLGNPMMDGLEPPE  197 (396)
T ss_pred             EEEeeccceeecCCCCCccchhhhccCCCccCHHHHHHhhchhhCEEeCCCHHHHHHHHHCCCeEEEeCcCHHhcCcccc
Confidence                  9999                9999      9999999999999999999999642 479999999999975321


Q ss_pred             Ch---hhh-hchhcCCCCCCcHH-----HHHHHHHHhc---CCCcEEEEc-CCCCHHHhh
Q 045654           89 SK---VVA-RLNFFSRVEEGGRG-----KCEDGMLLEK---HNLLIIWPT-GIEAFKEME  135 (137)
Q Consensus        89 ~~---~~a-~~~l~g~lgSqGA~-----~~v~~~l~~~---~~~~vi~~t-G~~~~~~~~  135 (137)
                      ..   ++. +-.+++  ||+|++     ..+.++++.+   .+++++|+| |..+.++++
T Consensus       198 ~~~l~~~~~~lllLp--GSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~  255 (396)
T TIGR03492       198 RKPLLTGRFRIALLP--GSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLEKLQ  255 (396)
T ss_pred             ccccCCCCCEEEEEC--CCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHH
Confidence            11   111 112346  899997     3666666653   489999999 777676654

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=98.99  E-value=8.5e-11  Score=96.28  Aligned_cols=68  Identities=12%  Similarity=0.120  Sum_probs=52.8

Q ss_pred             CCChhhHHHHHHhhhcCeEEEcCccCcccccCC-CceeEeccccccccccc-cChhhhhchh-----------cCCCCCC
Q 045654           38 FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRK-DKCVACGNPVRLSLMTY-VSKVVARLNF-----------FSRVEEG  104 (137)
Q Consensus        38 qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~-~k~v~tGnPVR~~~~~~-~~~~~a~~~l-----------~g~lgSq  104 (137)
                      ||++.|.+||+++++||++++.|+.+.++++.. .++.+||||+|+++... .++.++++.+           ++  ||+
T Consensus       124 ~waw~~~~~r~l~~~~d~v~~~~~~e~~~~~~~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~--GSR  201 (385)
T TIGR00215       124 VWAWRKWRAKKIEKATDFLLAILPFEKAFYQKKNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLP--GSR  201 (385)
T ss_pred             HhhcCcchHHHHHHHHhHhhccCCCcHHHHHhcCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEEC--CCC
Confidence            899999999999999999999999998887631 47889999999887431 2344444322           24  799


Q ss_pred             cHH
Q 045654          105 GRG  107 (137)
Q Consensus       105 GA~  107 (137)
                      |+.
T Consensus       202 ~ae  204 (385)
T TIGR00215       202 GSE  204 (385)
T ss_pred             HHH
Confidence            986

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=98.06  E-value=2.8e-06  Score=69.52  Aligned_cols=85  Identities=13%  Similarity=0.123  Sum_probs=57.8

Q ss_pred             hHHHHHHhhhcCeEEEcCccCcccccCC----CceeEeccccccccccccChhhhhchh-----------cCCCCCCcH-
Q 045654           43 GIANWVLSFFAHKVFVAFNSTTECFSRK----DKCVACGNPVRLSLMTYVSKVVARLNF-----------FSRVEEGGR-  106 (137)
Q Consensus        43 G~aNr~l~~~a~~v~~~f~~~~~~l~~~----~k~v~tGnPVR~~~~~~~~~~~a~~~l-----------~g~lgSqGA-  106 (137)
                      ...++|+.+.+|.++++++++.+++.+.    +|+.++|+||++.|....++.+.++.+           ++  |++|. 
T Consensus       138 ~~~~~w~~~~~d~~~v~s~~~~~~l~~~gi~~~ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~--G~lg~~  215 (391)
T PRK13608        138 RLHKNWITPYSTRYYVATKETKQDFIDVGIDPSTVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSA--GAFGVS  215 (391)
T ss_pred             CcccccccCCCCEEEECCHHHHHHHHHcCCCHHHEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEEC--CCcccc
Confidence            3567899999999999999887766311    679999999999886433333333222           23  67773 


Q ss_pred             H---HHHHHHHHhcCCCcEEEEcCCC
Q 045654          107 G---KCEDGMLLEKHNLLIIWPTGIE  129 (137)
Q Consensus       107 ~---~~v~~~l~~~~~~~vi~~tG~~  129 (137)
                      .   +++..++....+++++++||..
T Consensus       216 k~~~~li~~~~~~~~~~~~vvv~G~~  241 (391)
T PRK13608        216 KGFDTMITDILAKSANAQVVMICGKS  241 (391)
T ss_pred             hhHHHHHHHHHhcCCCceEEEEcCCC
Confidence            3   4444333334578999999975

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.02  E-value=9.9e-06  Score=65.20  Aligned_cols=92  Identities=12%  Similarity=0.082  Sum_probs=60.4

Q ss_pred             ChhhHHHHHHhhhcCeEEEcCccCcccccCC-CceeEeccccccccccccChhhhhchh-----------cCCCCCCcHH
Q 045654           40 QVPGIANWVLSFFAHKVFVAFNSTTECFSRK-DKCVACGNPVRLSLMTYVSKVVARLNF-----------FSRVEEGGRG  107 (137)
Q Consensus        40 a~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~-~k~v~tGnPVR~~~~~~~~~~~a~~~l-----------~g~lgSqGA~  107 (137)
                      ..+|++|++ .+.+|.+++.++.+.+++.+. .+++++|||++..+....++.+.+..+           ++  ||+|+.
T Consensus       123 ~~~~~~~~~-~~~~d~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~--gsr~~~  199 (380)
T PRK00025        123 WRQGRAFKI-AKATDHVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLP--GSRGQE  199 (380)
T ss_pred             cCchHHHHH-HHHHhhheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEEC--CCCHHH
Confidence            379999986 899999999999988887531 358899999998653212232333222           23  688875


Q ss_pred             -----HHHHHHHHh----cCCCcEEEEcC-CCCHHHh
Q 045654          108 -----KCEDGMLLE----KHNLLIIWPTG-IEAFKEM  134 (137)
Q Consensus       108 -----~~v~~~l~~----~~~~~vi~~tG-~~~~~~~  134 (137)
                           +.+.++++.    ..+++++|++| ....+++
T Consensus       200 ~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~  236 (380)
T PRK00025        200 IKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQI  236 (380)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHH
Confidence                 333444433    24689999988 4434444

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=97.86  E-value=9.5e-06  Score=65.55  Aligned_cols=85  Identities=15%  Similarity=0.157  Sum_probs=57.4

Q ss_pred             hhHHHHHHhhhcCeEEEcCccCcccc-----cCCCceeEeccccccccccccChhhhhchh-----------cCCCCCCc
Q 045654           42 PGIANWVLSFFAHKVFVAFNSTTECF-----SRKDKCVACGNPVRLSLMTYVSKVVARLNF-----------FSRVEEGG  105 (137)
Q Consensus        42 pG~aNr~l~~~a~~v~~~f~~~~~~l-----~~~~k~v~tGnPVR~~~~~~~~~~~a~~~l-----------~g~lgSqG  105 (137)
                      .|..++|+.+.+|.+++.++.+.+.+     +. +|+.++|+|++..|....++...++.+           ++  |++|
T Consensus       137 ~~~~~~~~~~~ad~i~~~s~~~~~~l~~~gi~~-~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~--G~~~  213 (380)
T PRK13609        137 FCLHKIWVHREVDRYFVATDHVKKVLVDIGVPP-EQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMA--GAHG  213 (380)
T ss_pred             CCCCcccccCCCCEEEECCHHHHHHHHHcCCCh-hHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEc--CCCC
Confidence            46788999999999999999887665     33 678999999998775432333233222           23  6776


Q ss_pred             HH---HHHHHHHHhcCCCcEEEEcCCC
Q 045654          106 RG---KCEDGMLLEKHNLLIIWPTGIE  129 (137)
Q Consensus       106 A~---~~v~~~l~~~~~~~vi~~tG~~  129 (137)
                      ..   ..+.+.+....+++++++||.+
T Consensus       214 ~~k~~~~li~~l~~~~~~~~viv~G~~  240 (380)
T PRK13609        214 VLGNVKELCQSLMSVPDLQVVVVCGKN  240 (380)
T ss_pred             CCcCHHHHHHHHhhCCCcEEEEEeCCC
Confidence            54   2333333334578999999964

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=97.73  E-value=8.5e-05  Score=58.77  Aligned_cols=95  Identities=31%  Similarity=0.461  Sum_probs=64.7

Q ss_pred             CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccCh-------hhhhch-hcCCCCCCcHH--
Q 045654           38 FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSK-------VVARLN-FFSRVEEGGRG--  107 (137)
Q Consensus        38 qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~-------~~a~~~-l~g~lgSqGA~--  107 (137)
                      +|..++..|+++.+++|.|++.++...++++. .|+.++|||+..++....+.       ++.... +.+  |+.+..  
T Consensus       120 ~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~-~~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~~--g~~~~~~~  196 (350)
T cd03785         120 QNAVPGLANRLLARFADRVALSFPETAKYFPK-DKAVVTGNPVREEILALDRERARLGLRPGKPTLLVFG--GSQGARAI  196 (350)
T ss_pred             CCCCccHHHHHHHHhhCEEEEcchhhhhcCCC-CcEEEECCCCchHHhhhhhhHHhcCCCCCCeEEEEEC--CcHhHHHH
Confidence            88899999999999999999999888776666 78999999999876542111       000001 112  444443  


Q ss_pred             -HHHHHHHHhc--CCCcEEEEcCCCCHHHhh
Q 045654          108 -KCEDGMLLEK--HNLLIIWPTGIEAFKEME  135 (137)
Q Consensus       108 -~~v~~~l~~~--~~~~vi~~tG~~~~~~~~  135 (137)
                       +.+.+++...  .++++++++|....++++
T Consensus       197 ~~~l~~a~~~l~~~~~~~~~i~G~g~~~~l~  227 (350)
T cd03785         197 NEAVPEALAELLRKRLQVIHQTGKGDLEEVK  227 (350)
T ss_pred             HHHHHHHHHHhhccCeEEEEEcCCccHHHHH
Confidence             4555555543  467788899987666554

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=97.50  E-value=0.00011  Score=59.92  Aligned_cols=82  Identities=13%  Similarity=0.055  Sum_probs=54.8

Q ss_pred             HHHHHhhhcCeEEEcCccCcccc-----cCCCceeEeccccccccccc-cChhhhhchh-----------cCCCCCCcHH
Q 045654           45 ANWVLSFFAHKVFVAFNSTTECF-----SRKDKCVACGNPVRLSLMTY-VSKVVARLNF-----------FSRVEEGGRG  107 (137)
Q Consensus        45 aNr~l~~~a~~v~~~f~~~~~~l-----~~~~k~v~tGnPVR~~~~~~-~~~~~a~~~l-----------~g~lgSqGA~  107 (137)
                      -.+|+.+.+|++++..+++.+.+     +. +|++++|+||+++|... .++++.++.+           .|  |+.|..
T Consensus       143 ~~~w~~~~~d~~~~~s~~~~~~l~~~g~~~-~ki~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~G--g~~g~~  219 (382)
T PLN02605        143 HPTWFHKGVTRCFCPSEEVAKRALKRGLEP-SQIRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMG--GGEGMG  219 (382)
T ss_pred             CcccccCCCCEEEECCHHHHHHHHHcCCCH-HHEEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEEC--CCcccc
Confidence            46889999999999998876654     34 78999999999987542 2334444443           12  455543


Q ss_pred             ---HHHHHHHHh-------cCCCcEEEEcCCC
Q 045654          108 ---KCEDGMLLE-------KHNLLIIWPTGIE  129 (137)
Q Consensus       108 ---~~v~~~l~~-------~~~~~vi~~tG~~  129 (137)
                         +++..+...       ..+.+++++||++
T Consensus       220 ~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~  251 (382)
T PLN02605        220 PLEETARALGDSLYDKNLGKPIGQVVVICGRN  251 (382)
T ss_pred             cHHHHHHHHHHhhccccccCCCceEEEEECCC
Confidence               444444322       2457899999976

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=97.45  E-value=0.00033  Score=55.94  Aligned_cols=95  Identities=28%  Similarity=0.357  Sum_probs=61.5

Q ss_pred             CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChhhh-------hch-hcCCCCCCcHH--
Q 045654           38 FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVA-------RLN-FFSRVEEGGRG--  107 (137)
Q Consensus        38 qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~~a-------~~~-l~g~lgSqGA~--  107 (137)
                      ++..+++.|+|+.+.+|.+++.+++.....+. +|+.++||||+.++.......+.       ... ++|  |+.|..  
T Consensus       122 ~~~~~~~~~r~~~~~~d~ii~~~~~~~~~~~~-~~i~vi~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~g--g~~~~~~~  198 (357)
T PRK00726        122 QNAVPGLANKLLARFAKKVATAFPGAFPEFFK-PKAVVTGNPVREEILALAAPPARLAGREGKPTLLVVG--GSQGARVL  198 (357)
T ss_pred             CCCCccHHHHHHHHHhchheECchhhhhccCC-CCEEEECCCCChHhhcccchhhhccCCCCCeEEEEEC--CcHhHHHH
Confidence            77889999999999999999998765333455 78999999999876442111100       000 123  444443  


Q ss_pred             -HHHHHHHHhcC-CCcEEEEcCCCCHHHhh
Q 045654          108 -KCEDGMLLEKH-NLLIIWPTGIEAFKEME  135 (137)
Q Consensus       108 -~~v~~~l~~~~-~~~vi~~tG~~~~~~~~  135 (137)
                       +.+.+++.... ...+++++|....+++.
T Consensus       199 ~~~l~~a~~~~~~~~~~~~~~G~g~~~~~~  228 (357)
T PRK00726        199 NEAVPEALALLPEALQVIHQTGKGDLEEVR  228 (357)
T ss_pred             HHHHHHHHHHhhhCcEEEEEcCCCcHHHHH
Confidence             45545555432 23678899988766553

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=97.27  E-value=0.00076  Score=53.30  Aligned_cols=92  Identities=25%  Similarity=0.389  Sum_probs=60.1

Q ss_pred             CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChh-------hhhch-hcCCCCCCcHH--
Q 045654           38 FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKV-------VARLN-FFSRVEEGGRG--  107 (137)
Q Consensus        38 qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~-------~a~~~-l~g~lgSqGA~--  107 (137)
                      ++..+++.++|+.+.+|.+++.+++..+++    +..++||||...+.......       +.... +.|  |+.|..  
T Consensus       121 ~~~~~~~~~~~~~~~~d~ii~~~~~~~~~~----~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~i~~~g--g~~~~~~~  194 (348)
T TIGR01133       121 QNAVPGLTNKLLSRFAKKVLISFPGAKDHF----EAVLVGNPVRQEIRSLPVPRERFGLREGKPTILVLG--GSQGAKIL  194 (348)
T ss_pred             CCCCccHHHHHHHHHhCeeEECchhHhhcC----CceEEcCCcCHHHhcccchhhhcCCCCCCeEEEEEC--CchhHHHH
Confidence            778899999999999999999999876655    25789999997764321110       01111 123  466654  


Q ss_pred             -HHHHHHHHhc--CCCcEEEEcCCCCHHHhh
Q 045654          108 -KCEDGMLLEK--HNLLIIWPTGIEAFKEME  135 (137)
Q Consensus       108 -~~v~~~l~~~--~~~~vi~~tG~~~~~~~~  135 (137)
                       +.+.+++...  .++++++++|....++++
T Consensus       195 ~~~l~~a~~~l~~~~~~~~~~~g~~~~~~l~  225 (348)
T TIGR01133       195 NELVPKALAKLAEKGIQIVHQTGKNDLEKVK  225 (348)
T ss_pred             HHHHHHHHHHHhhcCcEEEEECCcchHHHHH
Confidence             4444555442  357788899987655543

RL J Bacteriol 1993 Mar;175(6):1841-3

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=97.19  E-value=0.00046  Score=56.36  Aligned_cols=89  Identities=10%  Similarity=0.133  Sum_probs=57.3

Q ss_pred             hhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccC--hhhhhchhcCCCCCCcHH--HHHH---HHH
Q 045654           42 PGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVS--KVVARLNFFSRVEEGGRG--KCED---GML  114 (137)
Q Consensus        42 pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~--~~~a~~~l~g~lgSqGA~--~~v~---~~l  114 (137)
                      +|++. .+.+++|++++.|+--.+++ + .++.++|+|+++++.....  ++...-.+++  ||+|++  +.++   +++
T Consensus       118 ~~R~~-~i~k~~d~vl~ifPFE~~~y-g-~~~~~VGhPl~d~~~~~~~~~~~~~~I~llP--GSR~~Ei~~llP~~~~aa  192 (347)
T PRK14089        118 KGRAK-ILEKYCDFLASILPFEVQFY-Q-SKATYVGHPLLDEIKEFKKDLDKEGTIAFMP--GSRKSEIKRLMPIFKELA  192 (347)
T ss_pred             cchHH-HHHHHHhhhhccCCCCHHHh-C-CCCEEECCcHHHhhhhhhhhcCCCCEEEEEC--CCCHHHHHHHHHHHHHHH
Confidence            45665 56999999999887555555 4 6788999999987642100  0111112346  899997  5555   555


Q ss_pred             Hhc-CCCcEEEEcCCCCHHHhh
Q 045654          115 LEK-HNLLIIWPTGIEAFKEME  135 (137)
Q Consensus       115 ~~~-~~~~vi~~tG~~~~~~~~  135 (137)
                      ..+ ++..+.|+++..+.+.++
T Consensus       193 ~~L~~~~~~~~i~~a~~~~~i~  214 (347)
T PRK14089        193 KKLEGKEKILVVPSFFKGKDLK  214 (347)
T ss_pred             HHHhhcCcEEEEeCCCcHHHHH
Confidence            543 344788888887665443

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=95.07  E-value=0.037  Score=43.53  Aligned_cols=81  Identities=14%  Similarity=0.065  Sum_probs=46.9

Q ss_pred             hcCeEEEcCccCcc--c---ccCCCceeEecc---ccccccccccChhhh----hchh--cCCCCCCcHH--HHHHHHHH
Q 045654           52 FAHKVFVAFNSTTE--C---FSRKDKCVACGN---PVRLSLMTYVSKVVA----RLNF--FSRVEEGGRG--KCEDGMLL  115 (137)
Q Consensus        52 ~a~~v~~~f~~~~~--~---l~~~~k~v~tGn---PVR~~~~~~~~~~~a----~~~l--~g~lgSqGA~--~~v~~~l~  115 (137)
                      .||.++.+-..+..  |   .+. .+.+++|.   |+|++|.....+...    +..|  +|  ||.++.  ..+.+++.
T Consensus       118 ~~D~vin~~~~~~~~~y~~~~~~-~~~~l~G~~Y~~lr~eF~~~~~~~~~~~~~~~iLi~~G--G~d~~~~~~~~l~~l~  194 (279)
T TIGR03590       118 DCDLLLDQNLGADASDYQGLVPA-NCRLLLGPSYALLREEFYQLATANKRRKPLRRVLVSFG--GADPDNLTLKLLSALA  194 (279)
T ss_pred             CCCEEEeCCCCcCHhHhcccCcC-CCeEEecchHHhhhHHHHHhhHhhhcccccCeEEEEeC--CcCCcCHHHHHHHHHh
Confidence            67777766543221  1   233 56789999   999999653221111    1222  46  666654  34444444


Q ss_pred             h-cCCCcEEEEcCCC--CHHHhh
Q 045654          116 E-KHNLLIIWPTGIE--AFKEME  135 (137)
Q Consensus       116 ~-~~~~~vi~~tG~~--~~~~~~  135 (137)
                      . ..++++.+++|+.  +.++++
T Consensus       195 ~~~~~~~i~vv~G~~~~~~~~l~  217 (279)
T TIGR03590       195 ESQINISITLVTGSSNPNLDELK  217 (279)
T ss_pred             ccccCceEEEEECCCCcCHHHHH
Confidence            4 3578999999974  355443

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=94.30  E-value=0.16  Score=42.09  Aligned_cols=93  Identities=10%  Similarity=0.144  Sum_probs=61.6

Q ss_pred             hhHHHHHHhhhcCeEEEcCccCcccccCC-CceeEeccccccccccccChhhhhchhcCC---------CCCCcHH----
Q 045654           42 PGIANWVLSFFAHKVFVAFNSTTECFSRK-DKCVACGNPVRLSLMTYVSKVVARLNFFSR---------VEEGGRG----  107 (137)
Q Consensus        42 pG~aNr~l~~~a~~v~~~f~~~~~~l~~~-~k~v~tGnPVR~~~~~~~~~~~a~~~l~g~---------lgSqGA~----  107 (137)
                      |+++- -+.+++|.+++=||--.+++.+. ..++++|.|.-+++.-..+++.+|+.+.-+         .||.+++    
T Consensus       127 ~~Ra~-~i~~~~D~lLailPFE~~~y~k~g~~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl  205 (381)
T COG0763         127 PKRAV-KIAKYVDHLLAILPFEPAFYDKFGLPCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRL  205 (381)
T ss_pred             hhhHH-HHHHHhhHeeeecCCCHHHHHhcCCCeEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHH
Confidence            45543 45789999988777666666431 348999999999874335677777776111         2798886    


Q ss_pred             -----HHHHHHHHhcCCCcEEEEcCCCCHHHhh
Q 045654          108 -----KCEDGMLLEKHNLLIIWPTGIEAFKEME  135 (137)
Q Consensus       108 -----~~v~~~l~~~~~~~vi~~tG~~~~~~~~  135 (137)
                           +++.++....++.+++.-+-...++..+
T Consensus       206 ~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~  238 (381)
T COG0763         206 LPPFVQAAQELKARYPDLKFVLPLVNAKYRRII  238 (381)
T ss_pred             HHHHHHHHHHHHhhCCCceEEEecCcHHHHHHH
Confidence                 3333333335688888888777665543

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=94.11  E-value=0.014  Score=42.44  Aligned_cols=34  Identities=21%  Similarity=0.281  Sum_probs=29.0

Q ss_pred             HHHhhhcCeEEEcCccCcccccCC----CceeEecccc
Q 045654           47 WVLSFFAHKVFVAFNSTTECFSRK----DKCVACGNPV   80 (137)
Q Consensus        47 r~l~~~a~~v~~~f~~~~~~l~~~----~k~v~tGnPV   80 (137)
                      .|+.+.+|.+||+.+++++.+.++    +|+.+||+||
T Consensus       132 ~W~~~~~D~y~Vase~~~~~l~~~Gi~~~~I~vtGiPV  169 (169)
T PF06925_consen  132 FWIHPGVDRYFVASEEVKEELIERGIPPERIHVTGIPV  169 (169)
T ss_pred             CeecCCCCEEEECCHHHHHHHHHcCCChhHEEEeCccC
Confidence            478999999999999998777421    7899999997

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=90.44  E-value=0.92  Score=37.56  Aligned_cols=91  Identities=15%  Similarity=0.243  Sum_probs=56.8

Q ss_pred             hhHHHHHHhhhcCeEEEcCccCcccccCC-CceeEeccccccccccccChhhhhchhcCC--------CCCCcHH-----
Q 045654           42 PGIANWVLSFFAHKVFVAFNSTTECFSRK-DKCVACGNPVRLSLMTYVSKVVARLNFFSR--------VEEGGRG-----  107 (137)
Q Consensus        42 pG~aNr~l~~~a~~v~~~f~~~~~~l~~~-~k~v~tGnPVR~~~~~~~~~~~a~~~l~g~--------lgSqGA~-----  107 (137)
                      +|++. .+.+.+|.+++=||--.+++.+. -++.++|+|+-+.+....++.++++.++.+        -||.-++     
T Consensus       124 ~~R~~-~i~~~~D~ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~l~~~~~iIaLLPGSR~~EI~rll  202 (373)
T PF02684_consen  124 PGRAK-KIKKYVDHLLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKLLDPDKPIIALLPGSRKSEIKRLL  202 (373)
T ss_pred             ccHHH-HHHHHHhheeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhcCCCCCcEEEEeCCCCHHHHHHHH
Confidence            56764 45899999999988777777542 468999999999875544444444433111        1676665     


Q ss_pred             ----HHHHHHHHhcCCCcEEEEcCCCCHHH
Q 045654          108 ----KCEDGMLLEKHNLLIIWPTGIEAFKE  133 (137)
Q Consensus       108 ----~~v~~~l~~~~~~~vi~~tG~~~~~~  133 (137)
                          +++..+.....+++++..+-+...++
T Consensus       203 P~~l~aa~~l~~~~p~l~fvvp~a~~~~~~  232 (373)
T PF02684_consen  203 PIFLEAAKLLKKQRPDLQFVVPVAPEVHEE  232 (373)
T ss_pred             HHHHHHHHHHHHhCCCeEEEEecCCHHHHH
Confidence                22222222235788887776655544

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=81.84  E-value=3.9  Score=34.11  Aligned_cols=83  Identities=10%  Similarity=-0.013  Sum_probs=50.0

Q ss_pred             HHHHhhhcCeEEEcCccCcccccC-----CCceeEecccccccccccc-Chhhhhchhc-C---C-----CCCCcHH---
Q 045654           46 NWVLSFFAHKVFVAFNSTTECFSR-----KDKCVACGNPVRLSLMTYV-SKVVARLNFF-S---R-----VEEGGRG---  107 (137)
Q Consensus        46 Nr~l~~~a~~v~~~f~~~~~~l~~-----~~k~v~tGnPVR~~~~~~~-~~~~a~~~l~-g---~-----lgSqGA~---  107 (137)
                      ++++.+.+|.+++..+...+.+..     .+|+.++.|.|..+..... +..+.+..+. +   +     .|+.|..   
T Consensus       199 ~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~~~i~~vGrl~~~K~~  278 (465)
T PLN02871        199 IRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEKPLIVYVGRLGAEKNL  278 (465)
T ss_pred             HHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCCeEEEEeCCCchhhhH
Confidence            678889999999998776655531     1578899999997644321 1112221110 0   0     2566665   


Q ss_pred             HHHHHHHHhcCCCcEEEEcCCC
Q 045654          108 KCEDGMLLEKHNLLIIWPTGIE  129 (137)
Q Consensus       108 ~~v~~~l~~~~~~~vi~~tG~~  129 (137)
                      +.+.+++....++++++ +|..
T Consensus       279 ~~li~a~~~~~~~~l~i-vG~G  299 (465)
T PLN02871        279 DFLKRVMERLPGARLAF-VGDG  299 (465)
T ss_pred             HHHHHHHHhCCCcEEEE-EeCC
Confidence            66666666656777664 4543

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=81.19  E-value=0.45  Score=37.69  Aligned_cols=45  Identities=13%  Similarity=0.240  Sum_probs=34.5

Q ss_pred             hhhHHHHH-HhhhcCeEEEcCccCcccccCC----CceeEeccccccccc
Q 045654           41 VPGIANWV-LSFFAHKVFVAFNSTTECFSRK----DKCVACGNPVRLSLM   85 (137)
Q Consensus        41 ~pG~aNr~-l~~~a~~v~~~f~~~~~~l~~~----~k~v~tGnPVR~~~~   85 (137)
                      .|...+|+ +.+.+|.+|+..+..++++.+.    +|+.++|||+.+.+.
T Consensus       129 ~~~~~~r~~~~~~ad~~~~~s~~~~~~l~~~G~~~~kI~vign~v~d~~~  178 (363)
T cd03786         129 MPDEENRHAIDKLSDLHFAPTEEARRNLLQEGEPPERIFVVGNTMIDALL  178 (363)
T ss_pred             CCchHHHHHHHHHhhhccCCCHHHHHHHHHcCCCcccEEEECchHHHHHH
Confidence            35666776 6899999999999888776321    679999999876553

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	137
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	2e-05

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Length = 364

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 41  VPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMT 86
           + G+ N  L+  A KV  AF      F    + V  GNPVR  ++ 
Sbjct: 130 IAGLTNKWLAKIATKVMQAFPGA---F-PNAEVV--GNPVRTDVLA 169

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	137
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.8
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	97.65
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	97.06
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	96.98
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	95.83
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	94.25
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	92.53
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	91.9

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.80  E-value=2.2e-20  Score=149.56  Aligned_cols=128  Identities=23%  Similarity=0.155  Sum_probs=89.0

Q ss_pred             CCCCCCCCCCcceEeeeccCCCCCCCCCCCCc------------------------------cccCC-------------
Q 045654            1 MESTSVPFAGYDFVSVPIIVPLFRPIFSPTKP------------------------------PSSLP-------------   37 (137)
Q Consensus         1 ~E~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~------------------------------y~S~P-------------   37 (137)
                      +|.+++|++||+++.|++. +++|+ ..++++                              |+|+|             
T Consensus        42 ~e~~~v~~~g~~~~~i~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~v  119 (365)
T 3s2u_A           42 IENDLVPKAGLPLHLIQVS-GLRGK-GLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLV  119 (365)
T ss_dssp             THHHHTGGGTCCEEECC----------------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEE
T ss_pred             HhhchhhhcCCcEEEEECC-CcCCC-CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEE
Confidence            4667899999999999999 99873 322221                              88888             


Q ss_pred             ---CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChh-----hhhc-hhcCCCCCCcHH-
Q 045654           38 ---FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKV-----VARL-NFFSRVEEGGRG-  107 (137)
Q Consensus        38 ---qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~-----~a~~-~l~g~lgSqGA~-  107 (137)
                         ||++||++|||++++|++|+++|+++..  .. +|+++||||||+++.......     +... .++|  ||||+. 
T Consensus       120 ihe~n~~~G~~nr~l~~~a~~v~~~~~~~~~--~~-~k~~~~g~pvr~~~~~~~~~~~~~~~~~~~ilv~g--Gs~g~~~  194 (365)
T 3s2u_A          120 IHEQNAVAGTANRSLAPIARRVCEAFPDTFP--AS-DKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLG--GSLGAEP  194 (365)
T ss_dssp             EEECSSSCCHHHHHHGGGCSEEEESSTTSSC--C----CEECCCCCCGGGCCCTTSSCCCTTSCCEEEECC--TTTTCSH
T ss_pred             EEecchhhhhHHHhhccccceeeeccccccc--Cc-CcEEEECCCCchhhccchhhhcccCCCCcEEEEEC--CcCCccc
Confidence               9999999999999999999999998742  33 789999999999986422110     1111 1246  899986 


Q ss_pred             --HHHHHHHHhc---CCCcEEEEcCCCCHHHhh
Q 045654          108 --KCEDGMLLEK---HNLLIIWPTGIEAFKEME  135 (137)
Q Consensus       108 --~~v~~~l~~~---~~~~vi~~tG~~~~~~~~  135 (137)
                        +.+.+++...   .+++|+|+||+.+++.+.
T Consensus       195 ~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~  227 (365)
T 3s2u_A          195 LNKLLPEALAQVPLEIRPAIRHQAGRQHAEITA  227 (365)
T ss_dssp             HHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHH
T ss_pred             cchhhHHHHHhcccccceEEEEecCcccccccc
Confidence              7888887763   478999999999887764

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=97.65  E-value=3.4e-05  Score=61.92  Aligned_cols=90  Identities=19%  Similarity=0.233  Sum_probs=60.1

Q ss_pred             CChhhHHHHHH-hhhcCeEEEcCccCccccc-----CCCceeEeccccccccccccCh--------hhhhchhc----CC
Q 045654           39 DQVPGIANWVL-SFFAHKVFVAFNSTTECFS-----RKDKCVACGNPVRLSLMTYVSK--------VVARLNFF----SR  100 (137)
Q Consensus        39 Na~pG~aNr~l-~~~a~~v~~~f~~~~~~l~-----~~~k~v~tGnPVR~~~~~~~~~--------~~a~~~l~----g~  100 (137)
                      |.+|+..||.+ .+++|.+|+.++++.+.+.     . +|+.+||||+.+.+....++        ++.++.+.    ++
T Consensus       152 ~~~~~~~~r~~~~~~a~~~~~~se~~~~~l~~~G~~~-~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~  230 (396)
T 3dzc_A          152 SPWPEEGNRKLTAALTQYHFAPTDTSRANLLQENYNA-ENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASK  230 (396)
T ss_dssp             SSTTHHHHHHHHHHTCSEEEESSHHHHHHHHHTTCCG-GGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTS
T ss_pred             cCCcHHHHHHHHHHhcCEEECCCHHHHHHHHHcCCCc-CcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCC
Confidence            67899999997 8999999999998877763     3 67999999998876432111        22233331    00


Q ss_pred             ---------CCCCcHH-HHHHHHHHh----cCCCcEEEEcCCC
Q 045654          101 ---------VEEGGRG-KCEDGMLLE----KHNLLIIWPTGIE  129 (137)
Q Consensus       101 ---------lgSqGA~-~~v~~~l~~----~~~~~vi~~tG~~  129 (137)
                               .+++|.. +.+.+++..    ..++++++++|++
T Consensus       231 ~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~  273 (396)
T 3dzc_A          231 KLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN  273 (396)
T ss_dssp             EEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC
T ss_pred             CEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC
Confidence                     1355554 444444443    3578999999964

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=97.06  E-value=0.0002  Score=57.54  Aligned_cols=89  Identities=16%  Similarity=0.110  Sum_probs=56.5

Q ss_pred             CChhhHHHHHH-hhhcCeEEEcCccCccccc-----CCCceeEeccccccccccc---cChhhhhchhcC----C--C--
Q 045654           39 DQVPGIANWVL-SFFAHKVFVAFNSTTECFS-----RKDKCVACGNPVRLSLMTY---VSKVVARLNFFS----R--V--  101 (137)
Q Consensus        39 Na~pG~aNr~l-~~~a~~v~~~f~~~~~~l~-----~~~k~v~tGnPVR~~~~~~---~~~~~a~~~l~g----~--l--  101 (137)
                      +.+|+.+||.+ .+.+|.+|+.++++.+.|.     . +|+.+||||+.+.+...   .++++.++.+ |    +  +  
T Consensus       132 ~~~pee~nR~~~~~~a~~~~~~te~~~~~l~~~G~~~-~~I~vtGnp~~D~~~~~~~~~~~~~~~~~l-gl~~~~~iLvt  209 (385)
T 4hwg_A          132 QRVPEEINRKIIDHISDVNITLTEHARRYLIAEGLPA-ELTFKSGSHMPEVLDRFMPKILKSDILDKL-SLTPKQYFLIS  209 (385)
T ss_dssp             TTSTHHHHHHHHHHHCSEEEESSHHHHHHHHHTTCCG-GGEEECCCSHHHHHHHHHHHHHHCCHHHHT-TCCTTSEEEEE
T ss_pred             ccCcHHHHHHHHHhhhceeecCCHHHHHHHHHcCCCc-CcEEEECCchHHHHHHhhhhcchhHHHHHc-CCCcCCEEEEE
Confidence            46899999987 6899999999999877763     3 67999999999876431   1223334433 2    0  1  


Q ss_pred             -C---CCcH--H-HHHHHHHHhc-C--CCcEEEEcCCC
Q 045654          102 -E---EGGR--G-KCEDGMLLEK-H--NLLIIWPTGIE  129 (137)
Q Consensus       102 -g---SqGA--~-~~v~~~l~~~-~--~~~vi~~tG~~  129 (137)
                       +   +.|+  . +.+.+++... +  +++|++.+++.
T Consensus       210 ~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~  247 (385)
T 4hwg_A          210 SHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR  247 (385)
T ss_dssp             ECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH
T ss_pred             eCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH
Confidence             2   2332  1 3444444432 1  78999988864

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=96.98  E-value=0.00092  Score=51.47  Aligned_cols=90  Identities=20%  Similarity=0.257  Sum_probs=60.5

Q ss_pred             CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChhhh-------hchh-cCCCCCCcHH--
Q 045654           38 FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVA-------RLNF-FSRVEEGGRG--  107 (137)
Q Consensus        38 qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~~a-------~~~l-~g~lgSqGA~--  107 (137)
                      +|..+|..++++.+.+|.+++.+++.   ++   ++.++||||+.++.......+.       ...+ .+  |+.+..  
T Consensus       127 ~~~~~~~~~~~~~~~~d~v~~~~~~~---~~---~~~~i~n~v~~~~~~~~~~~~~~~~~~~~~~il~~~--g~~~~~k~  198 (364)
T 1f0k_A          127 QNGIAGLTNKWLAKIATKVMQAFPGA---FP---NAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVG--GSQGARIL  198 (364)
T ss_dssp             CSSSCCHHHHHHTTTCSEEEESSTTS---SS---SCEECCCCCCHHHHTSCCHHHHHTTCCSSEEEEEEC--TTTCCHHH
T ss_pred             cCCCCcHHHHHHHHhCCEEEecChhh---cC---CceEeCCccchhhcccchhhhhcccCCCCcEEEEEc--CchHhHHH
Confidence            88899999999999999999998876   43   4779999999876542111100       0011 22  455443  


Q ss_pred             -HHHHHHHHhc-CCCcEEEEcCCCCHHHhh
Q 045654          108 -KCEDGMLLEK-HNLLIIWPTGIEAFKEME  135 (137)
Q Consensus       108 -~~v~~~l~~~-~~~~vi~~tG~~~~~~~~  135 (137)
                       +.+.+++... +++++++++|....++++
T Consensus       199 ~~~li~a~~~l~~~~~~l~i~G~~~~~~l~  228 (364)
T 1f0k_A          199 NQTMPQVAAKLGDSVTIWHQSGKGSQQSVE  228 (364)
T ss_dssp             HHHHHHHHHHHGGGEEEEEECCTTCHHHHH
T ss_pred             HHHHHHHHHHhcCCcEEEEEcCCchHHHHH
Confidence             5555665553 267888999988766554

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=95.83  E-value=0.0055  Score=49.13  Aligned_cols=45  Identities=18%  Similarity=0.124  Sum_probs=36.8

Q ss_pred             ChhhHHHHH-HhhhcCeEEEcCccCccccc-----CCCceeEeccccccccc
Q 045654           40 QVPGIANWV-LSFFAHKVFVAFNSTTECFS-----RKDKCVACGNPVRLSLM   85 (137)
Q Consensus        40 a~pG~aNr~-l~~~a~~v~~~f~~~~~~l~-----~~~k~v~tGnPVR~~~~   85 (137)
                      ..|+..||. +.+.+|.+|+.++++.+.|.     . +|+.+||||+.+.+.
T Consensus       156 ~~p~~~~r~~~~~~a~~~~~~se~~~~~l~~~Gi~~-~~i~vvGn~~~D~~~  206 (403)
T 3ot5_A          156 PFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDP-ATIFVTGNTAIDALK  206 (403)
T ss_dssp             STTHHHHHHHHHHHCSEEEESSHHHHHHHHHTTCCG-GGEEECCCHHHHHHH
T ss_pred             CCcHHHHHHHHHHhcCEEECCCHHHHHHHHHcCCCc-ccEEEeCCchHHHHH
Confidence            468888986 78889999999999877663     3 679999999987664

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=94.25  E-value=0.02  Score=44.14  Aligned_cols=45  Identities=22%  Similarity=0.228  Sum_probs=35.4

Q ss_pred             CChhhHHHHHH-hhhcCeEEEcCccCccccc-----CCCceeEecccccccc
Q 045654           39 DQVPGIANWVL-SFFAHKVFVAFNSTTECFS-----RKDKCVACGNPVRLSL   84 (137)
Q Consensus        39 Na~pG~aNr~l-~~~a~~v~~~f~~~~~~l~-----~~~k~v~tGnPVR~~~   84 (137)
                      |..++..++++ .+.+|.+++..+...+.+.     . +|+.++|||+.+.+
T Consensus       127 ~~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~~g~~~-~~i~vi~n~~~d~~  177 (384)
T 1vgv_A          127 SPWPEEANRTLTGHLAMYHFSPTETSRQNLLRENVAD-SRIFITGNTVIDAL  177 (384)
T ss_dssp             SSTTHHHHHHHHHTTCSEEEESSHHHHHHHHHTTCCG-GGEEECCCHHHHHH
T ss_pred             CCCchHhhHHHHHhhccEEEcCcHHHHHHHHHcCCCh-hhEEEeCChHHHHH
Confidence            56788899886 7889999999987766653     3 57999999976543

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=92.53  E-value=0.06  Score=41.49  Aligned_cols=63  Identities=13%  Similarity=0.070  Sum_probs=35.6

Q ss_pred             ceeEecc---ccccccccccC--hhhhhchh--cCCCCCCcHH--HHHHHHHHhcCCCcEEEEcCCCCHHHhhc
Q 045654           72 KCVACGN---PVRLSLMTYVS--KVVARLNF--FSRVEEGGRG--KCEDGMLLEKHNLLIIWPTGIEAFKEMES  136 (137)
Q Consensus        72 k~v~tGn---PVR~~~~~~~~--~~~a~~~l--~g~lgSqGA~--~~v~~~l~~~~~~~vi~~tG~~~~~~~~~  136 (137)
                      ..+++|.   |+|++|.....  +++....|  +|  |+++..  +.+.+++.....+.|++.+|..+++++++
T Consensus       131 ~~~l~G~~Y~~lR~eF~~~~~~~r~~~~~ILv~~G--G~d~~~l~~~vl~~L~~~~~i~vv~G~~~~~~~~l~~  202 (282)
T 3hbm_A          131 CEVRCGFSYALIREEFYQEAKENRKKKYDFFICMG--GTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQK  202 (282)
T ss_dssp             CEEEESGGGCCCCHHHHHHTTCCCCCCEEEEEECC--SCCTTCHHHHHHHHSCTTSCEEEEECTTCTTHHHHHH
T ss_pred             CeEeeCCcccccCHHHHHhhhhccccCCeEEEEEC--CCchhhHHHHHHHHhhcCCCEEEEECCCchHHHHHHH
Confidence            3568899   99999975321  11122222  45  564442  44444443333566777777777777653

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=91.90  E-value=0.072  Score=40.99  Aligned_cols=40  Identities=5%  Similarity=0.047  Sum_probs=29.8

Q ss_pred             HHHHHhhhcCeEEEcCccCcccccCC----CceeEecccccccc
Q 045654           45 ANWVLSFFAHKVFVAFNSTTECFSRK----DKCVACGNPVRLSL   84 (137)
Q Consensus        45 aNr~l~~~a~~v~~~f~~~~~~l~~~----~k~v~tGnPVR~~~   84 (137)
                      ..+++.+.+|.+++.++...+.+.+.    +|+.++|||+.+.+
T Consensus       139 ~~~~~~~~~~~~~~~s~~~~~~l~~~g~~~~ki~vi~n~~~d~~  182 (376)
T 1v4v_A          139 NRRLTDVLTDLDFAPTPLAKANLLKEGKREEGILVTGQTGVDAV  182 (376)
T ss_dssp             HHHHHHHHCSEEEESSHHHHHHHHTTTCCGGGEEECCCHHHHHH
T ss_pred             HHHHHHHHhceeeCCCHHHHHHHHHcCCCcceEEEECCchHHHH
Confidence            34577889999999998876665321    57889999986544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	137
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	97.73

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=1.1e-05  Score=59.86  Aligned_cols=86  Identities=19%  Similarity=0.195  Sum_probs=60.5

Q ss_pred             CCChhhHHHHHHhhhcCeEEEcCccCcccccCCCceeEeccccccccccccChhhhhc--------hhcCCCCCCcHH--
Q 045654           38 FDQVPGIANWVLSFFAHKVFVAFNSTTECFSRKDKCVACGNPVRLSLMTYVSKVVARL--------NFFSRVEEGGRG--  107 (137)
Q Consensus        38 qNa~pG~aNr~l~~~a~~v~~~f~~~~~~l~~~~k~v~tGnPVR~~~~~~~~~~~a~~--------~l~g~lgSqGA~--  107 (137)
                      +|..+|.++++...+++.+...+....      .....+|+|++..+...........        .+.|  ||+|+.  
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--gs~g~~~~  192 (351)
T d1f0ka_         121 QNGIAGLTNKWLAKIATKVMQAFPGAF------PNAEVVGNPVRTDVLALPLPQQRLAGREGPVRVLVVG--GSQGARIL  192 (351)
T ss_dssp             CSSSCCHHHHHHTTTCSEEEESSTTSS------SSCEECCCCCCHHHHTSCCHHHHHTTCCSSEEEEEEC--TTTCCHHH
T ss_pred             cccccchhHHHhhhhcceeeccccccc------cceeEEcCCcccccccchhHHhhhhcccCCccccccc--ccchhhhh
Confidence            899999999999999999988876542      4467889999998765332221111        1124  799886  


Q ss_pred             -HHHHHHHHhc-CCCcEEEEcCCCCH
Q 045654          108 -KCEDGMLLEK-HNLLIIWPTGIEAF  131 (137)
Q Consensus       108 -~~v~~~l~~~-~~~~vi~~tG~~~~  131 (137)
                       +.+.+.+... ....++|+++..+.
T Consensus       193 ~~~~~~~~~~l~~~~~~i~~~~~~~~  218 (351)
T d1f0ka_         193 NQTMPQVAAKLGDSVTIWHQSGKGSQ  218 (351)
T ss_dssp             HHHHHHHHHHHGGGEEEEEECCTTCH
T ss_pred             HHHHHHhhhhhcccceeeeeccccch
Confidence             7777777664 45567777776554