Citrus Sinensis ID: 045686

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-----
MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIAERPPRAPVEERPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIFTVKFQEMNVKR
ccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccEEEEEcccHHHHHHccccccEEcccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccccccHHHHcccccccccccHHHHHHHccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccEEcccccEEEEccHHHHHHHHHHccccccEEEEcccccccccccccccccEEEEEEEEEcccccccccccccccccccEEEcccccccccccccHHHcccccccEEEcccccccccccccccccccccEEcccccccccccHHHHccccccEEcccccccccccccccccccccccEEcccccccccccccccccccccHHHccccccccEEEEEccHHHHHHHHccccccccccccEEccccccHHHcccccccccEEEEEEcccccEEEcccccccccccccEEEEEEccccccccccccccccccEEEEEcccccEEEcccccccccccccccccccEEEccccccccEEcccccccccccEEEEEcccccccccccccccccccEEEEccHHHHcccccccccHHHHcccccEEEcccc
ccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHccccccccccEEEEEEEEcccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccEEEEEEcccccccHHHcccccccccccccccEEEEEEccHHHHHHHcccccEEEccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHcHHHcccccccccHHHEEcHcccccHHHHHHHHEEEcccccccEcHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHcHHHcccEEEccccccccccccccccEEEEEEEcccccccccccccccccHHHHHHcccccccccccHHHHccccccEEEEEcccccccccccccccccccEEEEcccccccccccHHcccccccEEEEccccccccccccccccccccEEEEccccccccccccccccHHHHHHHcccccccEEEEEccccccHHHHHcccccccHHEEEEcccccccccccccccccccEEEEEEcccccccccccccccccccccEEEEEcccccccccccccccccccEEEEcccccHccccHHHcccccccccccccccEEEEcccccHHcccccccccccccEEEEcccccHHccccccccHHHHHHHHccccHHHHHccHccHHHHHHcccccccccccc
meilinpimdylvcplcgviskhcgyvcglTDSLNSLREARRDLENITRDVEARVDLAVeqrsrprhevngWLESAQFMLREVDGILQRGDEEIQKTclrktcfpgtwcsrdklgkEASEKIVAVEELIGrghfaviaerpprapveerpigktvglDSIISEVWRCIEDHNEKVIglygmggvgkTTLLKKLNNkfrdtghdfDLVIWVKVSRDANLEKIQESILRrfeipdqmwigkdedgrANEILSNLRGKKFVLLLDDVWErldlskvgvsdllddssqtgskivFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVgelqrypfkfagmgnsvfpILRFSYDSLREDIFKTCFLYCAlfpeehnitkdELIQLWIgegflngisprdqGEYIIESLKLACLLergensedsvKMHNLIRDMALELASENDNKTLVLQNNvgsniesinsfdgWHEAVRLSLWGSSIDFLalveapscpqVRTLLARLTMlhtlpipsrffdsmdALEVLDLsynldlnqlpEEIGRlknlhhlnlsntsigCLPTAIKRLIKLKVLLLDGiqchlsipegvisSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKrlnidqglnnrpsfsALRRLSIilcpdiqnltclvhvpslqflslsnchSLEEIVGtyasgssesrnYFSNLMavdldglptlrsicsgtvafpslqtlsitgcpslkklpfnseSARRSLISVRASAEWwnqlewedeATKDIFTVKFQEMNVKR
MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLenitrdvearvdlaveqrsrprhevngwlesaQFMLREVDGILQRGDEEIqktclrktcfpgtwcsrdklgKEASEKIVAVEeligrghfaviaerpprapveerpigktvgldSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQEsilrrfeipdqmwigkdeDGRANEILSNLRGKKFVLLLDDVWERLDLSkvgvsdllddssqtgskivfttrseevcgemgarrrfrveCLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLlnspklqrcIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEwwnqlewedeatKDIFTVKFQEMNVKR
MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIaerpprapveerpIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGkttllkklnnkFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAikrliklkvllldgiQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRltiessellslelglmlshleilRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIFTVKFQEMNVKR
**ILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLA*********EVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIAER********RPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDD****GSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLER**********HNLIRDMALELA***DNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFN****RRSLISVRASAEWWNQLEWEDEATKDIFTVKF*******
MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARV***********HEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVE********************************SIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEI*************ANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQR******GM*NSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVEL************ELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNS*********VRASAEWWNQLEWEDEATKDIFTVKFQEM****
MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIAERPPRAPVEERPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIFTVKFQEMNVKR
MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRG****************RPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIFTVKFQE*****
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MEILINPIMDYLVCPLCGVISKHCGYVCGxxxxxxxxxxxxxxxxxxxxxxxxxVDLAVEQRSRPRHEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIAERPPRAPVEERPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELASENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLMLSHLEILRIKCGFMKRLNIDQGLNNRPSFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSNCHSLEEIVGTYASGSSESRNYFSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIFTVKFQEMNVKR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query885 2.2.26 [Sep-21-2011]
Q8RXS5888 Probable disease resistan yes no 0.951 0.948 0.361 1e-135
O64973889 Disease resistance protei no no 0.945 0.941 0.348 1e-125
P60838894 Probable disease resistan no no 0.940 0.930 0.354 1e-123
Q940K0889 Probable disease resistan no no 0.932 0.928 0.342 1e-122
O22727967 Probable disease resistan no no 0.954 0.873 0.346 1e-121
Q9FG91848 Probable disease resistan no no 0.900 0.939 0.362 1e-121
O64789925 Probable disease resistan no no 0.931 0.890 0.341 1e-120
Q8L3R3885 Disease resistance protei no no 0.932 0.932 0.356 1e-118
O82484892 Putative disease resistan no no 0.922 0.914 0.332 1e-117
Q9FG90862 Probable disease resistan no no 0.915 0.939 0.340 1e-114
>sp|Q8RXS5|DRL40_ARATH Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana GN=At5g63020 PE=2 SV=2 Back     alignment and function desciption
 Score =  483 bits (1244), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 318/880 (36%), Positives = 485/880 (55%), Gaps = 38/880 (4%)

Query: 10  DYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEV 69
           D L   +C  ++++  Y+ GL ++L +L+ A   +E    D+  ++ L+ E+R   R  V
Sbjct: 12  DQLTKNVCSCLNRNGDYIHGLEENLTALQRALEQIEQRREDLLRKI-LSEERRGLQRLSV 70

Query: 70  -NGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEEL 128
             GW+   + ++  V+ +++    ++Q+ CL   C      S  + GK   + I  VE L
Sbjct: 71  VQGWVSKVEAIVPRVNELVRMRSVQVQRLCLCGFC-SKNLVSSYRYGKRVMKMIEEVEVL 129

Query: 129 IGRGHFAVIAERPPRAPVEERPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTT 188
             +G FAV+AER   A VEERP    V +D ++   W  + +    ++GL+GMGGVGKTT
Sbjct: 130 RYQGDFAVVAERVDAARVEERPTRPMVAMDPMLESAWNRLMEDEIGILGLHGMGGVGKTT 189

Query: 189 LLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEI 248
           LL  +NN+F   G +FD+VIW+ VS++  +++IQ+ I  +    ++ W  K ED +A+ I
Sbjct: 190 LLSHINNRFSRVGGEFDIVIWIVVSKELQIQRIQDEIWEKLRSDNEKWKQKTEDIKASNI 249

Query: 249 LSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRF 308
            + L+ K+FVLLLDD+W ++DL++VGV      S + G KIVFTTR +E+CG MG     
Sbjct: 250 YNVLKHKRFVLLLDDIWSKVDLTEVGVPF---PSRENGCKIVFTTRLKEICGRMGVDSDM 306

Query: 309 RVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGP 368
            V CL+P+ A DLF  KVGE    SH EI  +A+TV ++CRGLPLAL  IG  MA +   
Sbjct: 307 EVRCLAPDDAWDLFTKKVGEITLGSHPEIPTVARTVAKKCRGLPLALNVIGETMAYKRTV 366

Query: 369 TQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDE 428
            +WR A+  L     +F+GM + + PIL++SYD+L+ +  K CF YCALFPE+HNI K++
Sbjct: 367 QEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQLKLCFQYCALFPEDHNIEKND 426

Query: 429 LIQLWIGEGFL--NGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELAS 486
           L+  WIGEGF+  N     +QG  II  L  +CLL   E ++++VKMH+++R+MAL +AS
Sbjct: 427 LVDYWIGEGFIDRNKGKAENQGYEIIGILVRSCLL--MEENQETVKMHDVVREMALWIAS 484

Query: 487 ENDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLARL 546
           +   +        G    +I   + W  A R+SL  ++I+  ++ +AP  PQ+ TLL R 
Sbjct: 485 DFGKQKENFIVQAGLQSRNIPEIEKWKVARRVSLMFNNIE--SIRDAPESPQLITLLLRK 542

Query: 547 TMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAI 606
             L    I S FF  M  L VLDLS N DL  LP EI    +L +L+LS T I   P  +
Sbjct: 543 NFLGH--ISSSFFRLMPMLVVLDLSMNRDLRHLPNEISECVSLQYLSLSRTRIRIWPAGL 600

Query: 607 KRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNC 666
             L KL  L L+  +   SI    IS L+SL+V   F +   E  DP      +L+EL  
Sbjct: 601 VELRKLLYLNLEYTRMVESI--CGISGLTSLKVLRLFVSGFPE--DP-----CVLNELQL 651

Query: 667 LEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLSLELGLM--LSHLEILRIK 724
           LE+L  L++TL     +++ L++ +L  C R L IE+    S  +  +  +  L+ L   
Sbjct: 652 LENLQTLTITLGLASILEQFLSNQRLASCTRALRIENLNPQSSVISFVATMDSLQELHFA 711

Query: 725 CGFMKRLNIDQGLNNRP--------SFSALRRLSIILCPDIQNLTCLVHVPSLQFLSLSN 776
              +  + + +     P         F  L ++S+  C  +++LT L+  P+L  L + +
Sbjct: 712 DSDIWEIKVKRNETVLPLHIPTTTTFFPNLSQVSLEFCTRLRDLTWLIFAPNLTVLRVIS 771

Query: 777 CHSLEEIVGTYASGSSESRNY--FSNLMAVDLDGLPTLRSICSGTVAFPSLQTLSITGCP 834
              L+E++       +E +N   F  L  + L+ +  L+ I  G + FP LQ + + GC 
Sbjct: 772 ASDLKEVIN---KEKAEQQNLIPFQELKELRLENVQMLKHIHRGPLPFPCLQKILVNGCS 828

Query: 835 SLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIF 874
            L+KLP N  S  R  + + A  +W   LEWEDEATK  F
Sbjct: 829 ELRKLPLNFTSVPRGDLVIEAHKKWIEILEWEDEATKARF 868
Probable disease resistance protein.
Arabidopsis thaliana (taxid: 3702)
>sp|O64973|RPS5_ARATH Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2 Back     alignment and function description
>sp|P60838|DRL1_ARATH Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=3 SV=1 Back     alignment and function description
>sp|Q940K0|DRL15_ARATH Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana GN=At1g61180 PE=2 SV=2 Back     alignment and function description
>sp|O22727|DRL16_ARATH Probable disease resistance protein At1g61190 OS=Arabidopsis thaliana GN=At1g61190 PE=3 SV=1 Back     alignment and function description
>sp|Q9FG91|DRL32_ARATH Probable disease resistance protein At5g43730 OS=Arabidopsis thaliana GN=At5g43730 PE=2 SV=1 Back     alignment and function description
>sp|O64789|DRL18_ARATH Probable disease resistance protein At1g61310 OS=Arabidopsis thaliana GN=At1g61310 PE=2 SV=1 Back     alignment and function description
>sp|Q8L3R3|RFL1_ARATH Disease resistance protein RFL1 OS=Arabidopsis thaliana GN=RFL1 PE=3 SV=2 Back     alignment and function description
>sp|O82484|DRL23_ARATH Putative disease resistance protein At4g10780 OS=Arabidopsis thaliana GN=At4g10780 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG90|DRL33_ARATH Probable disease resistance protein At5g43740 OS=Arabidopsis thaliana GN=At5g43740 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query885
359482561 1639 PREDICTED: probable disease resistance p 0.970 0.524 0.452 0.0
147782477 1377 hypothetical protein VITISV_002420 [Viti 0.966 0.620 0.446 0.0
225442539882 PREDICTED: probable disease resistance p 0.967 0.970 0.453 0.0
147838868882 hypothetical protein VITISV_011431 [Viti 0.967 0.970 0.452 0.0
147859094881 hypothetical protein VITISV_018933 [Viti 0.932 0.936 0.436 0.0
359482559883 PREDICTED: disease resistance protein RP 0.970 0.972 0.437 0.0
255552975 1066 Disease resistance protein RPS5, putativ 0.970 0.805 0.462 0.0
359482594894 PREDICTED: disease resistance protein RP 0.954 0.945 0.436 0.0
225442515904 PREDICTED: probable disease resistance p 0.964 0.944 0.422 1e-180
225465083920 PREDICTED: probable disease resistance p 0.961 0.925 0.429 1e-179
>gi|359482561|ref|XP_002277853.2| PREDICTED: probable disease resistance protein At5g63020-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/907 (45%), Positives = 580/907 (63%), Gaps = 48/907 (5%)

Query: 5   INPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVE---- 60
           ++PI+D +   L    +K   Y+  L  +LNSL    ++L N+  DV A V+   +    
Sbjct: 4   VSPILD-VATRLWDCTAKRVVYIRELEKNLNSLERLTKELSNLRTDVMAEVEREEKEEVP 62

Query: 61  QRSRPRHEVNGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASE 120
           QR R ++EV GWL + Q M  +V+ ILQ G +EIQ+ CL  TC P    SR +LGK  +E
Sbjct: 63  QRRR-KNEVGGWLSAVQAMEEQVEEILQNGRQEIQQKCL-GTC-PKNCRSRYRLGKTVTE 119

Query: 121 KIVAVEELIGRGHFAVIAERPPRAPVEERPIGKTVGLDSIISEVWRCIEDHNEKVIGLYG 180
           KI AV EL  +GHF V+ +R PRAPV+ERP+GKTVGLD +  +V RC+ED   + IGLYG
Sbjct: 120 KINAVTELTDKGHFDVVTDRLPRAPVDERPMGKTVGLDLMFEKVRRCLEDEQVRSIGLYG 179

Query: 181 MGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKD 240
           +GG GKTTLLKK+NN++    +DFD+VIWV VS+  ++EKIQE IL++  IP+  W    
Sbjct: 180 IGGAGKTTLLKKINNEYFGRSNDFDVVIWVVVSKSISIEKIQEVILKKLTIPEHNWKSST 239

Query: 241 EDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIV-FTTRSEEVC 299
           ++ +A EI   L+ K FV+LLDD+WERLDL +VG+ DL D   QT S++V  TTRSE VC
Sbjct: 240 KEEKAAEIFKLLKAKNFVILLDDMWERLDLLEVGIPDLSD---QTKSRVVLLTTRSERVC 296

Query: 300 GEMGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIG 359
            EM   +R RVECL+P+ A  LF  KVGE++ +SH +I  LA+ VVEEC GLPLALV IG
Sbjct: 297 DEMEVHKRMRVECLTPDEAFSLFCDKVGENILNSHPDIKRLAKIVVEECEGLPLALVVIG 356

Query: 360 HAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFP 419
            +MASR  P +W  A+  L+ YP +F+GMG+ VFPIL+FSYD L     K+CFLYC++FP
Sbjct: 357 RSMASRKTPREWEQALQVLKSYPAEFSGMGDHVFPILKFSYDHLDNHTIKSCFLYCSIFP 416

Query: 420 EEHNITKDELIQLWIGEGFLNGIS----PRDQGEYIIESLKLACLLERGENSEDSVKMHN 475
           E+  I  +ELI LWIGEGF+N  +     R+QG+ II SLKLACLLE G+ SE + KMH+
Sbjct: 417 EDSIIENEELIDLWIGEGFVNKFADVHKARNQGDGIIRSLKLACLLE-GDVSESTCKMHD 475

Query: 476 LIRDMALEL---ASENDNKTLVLQNNVGSNIESINSFD--GWHEAVRLSLWGSSIDFLAL 530
           +IRDMAL L   + E  +K+ VL+     ++E I +++   W EA R+SLW S+I+   L
Sbjct: 476 VIRDMALWLSCESGEEKHKSFVLK-----HVELIEAYEIVKWKEAQRISLWHSNIN-EGL 529

Query: 531 VEAPSCPQVRTLLARLTMLHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLH 590
             +P    ++TL+ R + + +LPI   FF SM  + VLDLS N +L +LP EI RL++L 
Sbjct: 530 SLSPRFLNLQTLILRNSNMKSLPIG--FFQSMPVIRVLDLSDNRNLVELPLEICRLESLE 587

Query: 591 HLNLSNTSIGCLPTAIKRLIKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCF-STELVE 649
           +LNL+ TSI  +P  +K L KL+ L+LD +     IP  VIS L +LQ+F    + ++VE
Sbjct: 588 YLNLTGTSIKRMPIELKNLTKLRCLMLDHVVALEVIPSNVISCLPNLQMFRMLHALDIVE 647

Query: 650 LIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIRRLTIESSELLS- 708
                ++E  +L EL CLE+L+ +S+TL +  AV   L S  LQ+C+R L + +   L  
Sbjct: 648 -----YDEVGVLQELECLEYLSWISITLLTVPAVQIYLTSLMLQKCVRDLCLMTCPGLKV 702

Query: 709 LELGL-MLSHLEILRIK-CGFMKRLNIDQGLN----NRPSFSALRRLSIILCPDIQNLTC 762
           +EL L  L  L +LR + C  ++R+ I+ GL+    +  +F  L ++ I+ C  + NLT 
Sbjct: 703 VELPLSTLQTLTVLRFEYCNDLERVKINMGLSRGHISNSNFHNLVKVFIMGCRFL-NLTW 761

Query: 763 LVHVPSLQFLSLSNCHSLEEIVGTYASGSSE----SRNYFSNLMAVDLDGLPTLRSICSG 818
           L++ PSL+FLS+     +EEI+G+   G SE    + + FS L+ + L+ LP L+SI   
Sbjct: 762 LIYAPSLEFLSVRASWEMEEIIGSDEYGDSEIDQQNLSIFSRLVTLQLEDLPNLKSIYKR 821

Query: 819 TVAFPSLQTLSITGCPSLKKLPFNSESARRSLISVRASAEWWNQLEWEDEATKDIFTVKF 878
            + FPSL+ +++ GCP+L+KLP NS +A  +L  +     WW QLEWED+  K I T  F
Sbjct: 822 ALPFPSLKEINVGGCPNLRKLPLNSNNATNTLKEIAGHPTWWEQLEWEDDNLKRICTPYF 881

Query: 879 QEMNVKR 885
           ++ +  R
Sbjct: 882 KKRSSYR 888

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147782477|emb|CAN75117.1| hypothetical protein VITISV_002420 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442539|ref|XP_002278938.1| PREDICTED: probable disease resistance protein At5g63020 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147838868|emb|CAN70333.1| hypothetical protein VITISV_011431 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147859094|emb|CAN80410.1| hypothetical protein VITISV_018933 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359482559|ref|XP_002277748.2| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255552975|ref|XP_002517530.1| Disease resistance protein RPS5, putative [Ricinus communis] gi|223543162|gb|EEF44694.1| Disease resistance protein RPS5, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359482594|ref|XP_002279461.2| PREDICTED: disease resistance protein RPS5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442515|ref|XP_002278439.1| PREDICTED: probable disease resistance protein At5g63020-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225465083|ref|XP_002266249.1| PREDICTED: probable disease resistance protein At5g63020-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query885
TAIR|locus:2166320888 AT5G63020 [Arabidopsis thalian 0.751 0.748 0.357 8.2e-123
TAIR|locus:2034770894 SUMM2 "AT1G12280" [Arabidopsis 0.934 0.925 0.327 2.9e-112
TAIR|locus:2201996889 RPS5 "AT1G12220" [Arabidopsis 0.943 0.939 0.323 5.5e-109
TAIR|locus:2201986885 RFL1 "AT1G12210" [Arabidopsis 0.736 0.736 0.351 5e-108
TAIR|locus:2034765884 AT1G12290 [Arabidopsis thalian 0.934 0.935 0.321 9.2e-107
TAIR|locus:2008440899 AT1G61180 [Arabidopsis thalian 0.934 0.919 0.317 3.6e-105
TAIR|locus:2132741892 AT4G10780 [Arabidopsis thalian 0.929 0.922 0.316 1.6e-104
TAIR|locus:2005517909 RPS2 "RESISTANT TO P. SYRINGAE 0.742 0.722 0.337 4e-104
TAIR|locus:2008510967 AT1G61190 "AT1G61190" [Arabido 0.969 0.887 0.320 2.3e-103
TAIR|locus:2170892848 AT5G43730 [Arabidopsis thalian 0.900 0.939 0.332 1.3e-102
TAIR|locus:2166320 AT5G63020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1030 (367.6 bits), Expect = 8.2e-123, Sum P(2) = 8.2e-123
 Identities = 248/694 (35%), Positives = 378/694 (54%)

Query:    10 DYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEV 69
             D L   +C  ++++  Y+ GL ++L +L+ A   +E    D+  ++ L+ E+R   R  V
Sbjct:    12 DQLTKNVCSCLNRNGDYIHGLEENLTALQRALEQIEQRREDLLRKI-LSEERRGLQRLSV 70

Query:    70 -NGWLESAQFMLREVDGILQRGDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEEL 128
               GW+   + ++  V+ +++    ++Q+ CL   C      S  + GK   + I  VE L
Sbjct:    71 VQGWVSKVEAIVPRVNELVRMRSVQVQRLCLCGFCSKNL-VSSYRYGKRVMKMIEEVEVL 129

Query:   129 IGRGHFAVIXXXXXXXXXXXXXIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGXXX 188
               +G FAV+                 V +D ++   W  + +    ++GL+GMGGVG   
Sbjct:   130 RYQGDFAVVAERVDAARVEERPTRPMVAMDPMLESAWNRLMEDEIGILGLHGMGGVGKTT 189

Query:   189 XXXXXXXXFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGKDEDGRANEI 248
                     F   G +FD+VIW+ VS++  +++IQ+ I  +    ++ W  K ED +A+ I
Sbjct:   190 LLSHINNRFSRVGGEFDIVIWIVVSKELQIQRIQDEIWEKLRSDNEKWKQKTEDIKASNI 249

Query:   249 LSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRRF 308
              + L+ K+FVLLLDD+W ++DL++VGV      S + G KIVFTTR +E+CG MG     
Sbjct:   250 YNVLKHKRFVLLLDDIWSKVDLTEVGVPF---PSRENGCKIVFTTRLKEICGRMGVDSDM 306

Query:   309 RVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGP 368
              V CL+P+ A DLF  KVGE    SH EI  +A+TV ++CRGLPLAL  IG  MA +   
Sbjct:   307 EVRCLAPDDAWDLFTKKVGEITLGSHPEIPTVARTVAKKCRGLPLALNVIGETMAYKRTV 366

Query:   369 TQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDE 428
              +WR A+  L     +F+GM + + PIL++SYD+L+ +  K CF YCALFPE+HNI K++
Sbjct:   367 QEWRSAIDVLTSSAAEFSGMEDEILPILKYSYDNLKSEQLKLCFQYCALFPEDHNIEKND 426

Query:   429 LIQLWIGEGFL--NGISPRDQGEYIIESLKLACLLERGENSEDSVKMHNLIRDMALELAS 486
             L+  WIGEGF+  N     +QG  II  L  +CLL   E ++++VKMH+++R+MAL +AS
Sbjct:   427 LVDYWIGEGFIDRNKGKAENQGYEIIGILVRSCLLM--EENQETVKMHDVVREMALWIAS 484

Query:   487 E--NDNKTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALVEAPSCPQVRTLLA 544
             +     +  ++Q   G    +I   + W  A R+SL  ++I+  ++ +AP  PQ+ TLL 
Sbjct:   485 DFGKQKENFIVQ--AGLQSRNIPEIEKWKVARRVSLMFNNIE--SIRDAPESPQLITLLL 540

Query:   545 RLTML-HTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLP 603
             R   L H   I S FF  M  L VLDLS N DL  LP EI    +L +L+LS T I   P
Sbjct:   541 RKNFLGH---ISSSFFRLMPMLVVLDLSMNRDLRHLPNEISECVSLQYLSLSRTRIRIWP 597

Query:   604 TAXXXXXXXXXXXXXXXQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDE 663
                              +   SI  G IS L+SL+V   F +   E  DP      +L+E
Sbjct:   598 AGLVELRKLLYLNLEYTRMVESIC-G-ISGLTSLKVLRLFVSGFPE--DP-----CVLNE 648

Query:   664 LNCLEHLNDLSLTLFSTEAVDKLLNSPKLQRCIR 697
             L  LE+L  L++TL     +++ L++ +L  C R
Sbjct:   649 LQLLENLQTLTITLGLASILEQFLSNQRLASCTR 682
GO:0005634 "nucleus" evidence=ISM
GO:0006952 "defense response" evidence=IEA;ISS
GO:0043531 "ADP binding" evidence=IEA
TAIR|locus:2034770 SUMM2 "AT1G12280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201996 RPS5 "AT1G12220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201986 RFL1 "AT1G12210" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034765 AT1G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008440 AT1G61180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132741 AT4G10780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005517 RPS2 "RESISTANT TO P. SYRINGAE 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008510 AT1G61190 "AT1G61190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170892 AT5G43730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RXS5DRL40_ARATHNo assigned EC number0.36130.95140.9481yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query885
pfam00931285 pfam00931, NB-ARC, NB-ARC domain 6e-81
PLN03210 1153 PLN03210, PLN03210, Resistant to P 2e-07
COG4886394 COG4886, COG4886, Leucine-rich repeat (LRR) protei 2e-05
smart00382148 smart00382, AAA, ATPases associated with a variety 3e-05
PLN03150623 PLN03150, PLN03150, hypothetical protein; Provisio 8e-04
PLN03150623 PLN03150, PLN03150, hypothetical protein; Provisio 0.001
pfam1385560 pfam13855, LRR_8, Leucine rich repeat 0.001
PLN00113 968 PLN00113, PLN00113, leucine-rich repeat receptor-l 0.002
PLN00113 968 PLN00113, PLN00113, leucine-rich repeat receptor-l 0.003
PLN00113 968 PLN00113, PLN00113, leucine-rich repeat receptor-l 0.003
pfam13191154 pfam13191, AAA_16, AAA ATPase domain 0.004
pfam1279943 pfam12799, LRR_4, Leucine Rich repeats (2 copies) 0.004
COG1474366 COG1474, CDC6, Cdc6-related protein, AAA superfami 0.004
>gnl|CDD|216202 pfam00931, NB-ARC, NB-ARC domain Back     alignment and domain information 
 Score =  262 bits (671), Expect = 6e-81
 Identities = 113/269 (42%), Positives = 160/269 (59%), Gaps = 7/269 (2%)

Query: 172 NEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKIQESILRRFEI 231
           N  V+G+ GMGGVGKTTL K++ N     GH FD V WV VS+     ++Q+ IL+   +
Sbjct: 18  NLGVVGIVGMGGVGKTTLAKQIYNDDSVGGH-FDSVAWVVVSKTYTEFRLQKDILQELGL 76

Query: 232 PDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVF 291
            D  W+ K+E   A +I   L  K+F+L+LDDVWE+ D  K+GV        + GS+++ 
Sbjct: 77  DDSDWVEKNESELAVKIKEALLRKRFLLVLDDVWEKNDWDKIGVPFP---DGENGSRVIV 133

Query: 292 TTRSEEVCGEMGARRRF-RVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRG 350
           TTRSE V G MG   +   VE L PE + +LF  KV E       E+  +A+ +VE+C+G
Sbjct: 134 TTRSESVAGRMGGTSKPHEVESLEPEESWELFSNKVFEKELPPCPELEEVAKEIVEKCKG 193

Query: 351 LPLALVTIGHAMASRMGPTQWRYAVGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKT 410
           LPLAL  +G  +A +    +W + + +L        G+ N V  IL  SYD+L   + K 
Sbjct: 194 LPLALKVLGGLLAFKSTVQEWEHVLEQLNNELAGRDGL-NEVLSILSLSYDNLPMHL-KR 251

Query: 411 CFLYCALFPEEHNITKDELIQLWIGEGFL 439
           CFLY ALFPE++NI K++LI+LWI EGF+
Sbjct: 252 CFLYLALFPEDYNIRKEQLIKLWIAEGFV 280

Length = 285
>gnl|CDD|215633 PLN03210, PLN03210, Resistant to P Back     alignment and domain information
>gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] Back     alignment and domain information
>gnl|CDD|214640 smart00382, AAA, ATPases associated with a variety of cellular activities Back     alignment and domain information
>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat Back     alignment and domain information
>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>gnl|CDD|221970 pfam13191, AAA_16, AAA ATPase domain Back     alignment and domain information
>gnl|CDD|205079 pfam12799, LRR_4, Leucine Rich repeats (2 copies) Back     alignment and domain information
>gnl|CDD|224391 COG1474, CDC6, Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 885
KOG4658889 consensus Apoptotic ATPase [Signal transduction me 100.0
PLN03210 1153 Resistant to P. syringae 6; Provisional 100.0
PF00931287 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is 100.0
KOG0444 1255 consensus Cytoskeletal regulator Flightless-I (con 99.9
KOG0444 1255 consensus Cytoskeletal regulator Flightless-I (con 99.86
KOG4194 873 consensus Membrane glycoprotein LIG-1 [Signal tran 99.85
KOG4194 873 consensus Membrane glycoprotein LIG-1 [Signal tran 99.85
PLN00113 968 leucine-rich repeat receptor-like protein kinase; 99.84
PLN00113 968 leucine-rich repeat receptor-like protein kinase; 99.83
PLN03210 1153 Resistant to P. syringae 6; Provisional 99.78
KOG0472565 consensus Leucine-rich repeat protein [Function un 99.75
KOG0472 565 consensus Leucine-rich repeat protein [Function un 99.72
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.66
PRK15387 788 E3 ubiquitin-protein ligase SspH2; Provisional 99.6
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.58
PRK15387 788 E3 ubiquitin-protein ligase SspH2; Provisional 99.55
PRK15370 754 E3 ubiquitin-protein ligase SlrP; Provisional 99.53
PRK15370 754 E3 ubiquitin-protein ligase SlrP; Provisional 99.52
KOG0617264 consensus Ras suppressor protein (contains leucine 99.48
PRK04841 903 transcriptional regulator MalT; Provisional 99.45
KOG0617264 consensus Ras suppressor protein (contains leucine 99.39
KOG4237498 consensus Extracellular matrix protein slit, conta 99.39
KOG4658889 consensus Apoptotic ATPase [Signal transduction me 99.38
KOG4237498 consensus Extracellular matrix protein slit, conta 99.36
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 99.29
PRK00411394 cdc6 cell division control protein 6; Reviewed 99.27
COG2909 894 MalT ATP-dependent transcriptional regulator [Tran 99.22
TIGR02928365 orc1/cdc6 family replication initiation protein. M 99.19
cd00116319 LRR_RI Leucine-rich repeats (LRRs), ribonuclease i 99.19
KOG0532 722 consensus Leucine-rich repeat (LRR) protein, conta 99.14
PF01637234 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 99.12
PRK00080328 ruvB Holliday junction DNA helicase RuvB; Reviewed 99.11
PF14580175 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ 99.09
TIGR00635305 ruvB Holliday junction DNA helicase, RuvB subunit. 99.08
cd00116319 LRR_RI Leucine-rich repeats (LRRs), ribonuclease i 99.06
PF14580175 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ 98.94
PF05729166 NACHT: NACHT domain 98.94
KOG4341483 consensus F-box protein containing LRR [General fu 98.81
COG3899849 Predicted ATPase [General function prediction only 98.79
PRK06893229 DNA replication initiation factor; Validated 98.78
KOG3207505 consensus Beta-tubulin folding cofactor E [Posttra 98.78
COG2256436 MGS1 ATPase related to the helicase subunit of the 98.76
KOG0532 722 consensus Leucine-rich repeat (LRR) protein, conta 98.74
KOG3207505 consensus Beta-tubulin folding cofactor E [Posttra 98.73
PTZ001121164 origin recognition complex 1 protein; Provisional 98.72
KOG1259490 consensus Nischarin, modulator of integrin alpha5 98.7
KOG1259490 consensus Nischarin, modulator of integrin alpha5 98.7
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 98.68
COG4886394 Leucine-rich repeat (LRR) protein [Function unknow 98.66
COG1474366 CDC6 Cdc6-related protein, AAA superfamily ATPase 98.61
PRK13342413 recombination factor protein RarA; Reviewed 98.61
KOG0531414 consensus Protein phosphatase 1, regulatory subuni 98.55
KOG4341483 consensus F-box protein containing LRR [General fu 98.53
PF05496233 RuvB_N: Holliday junction DNA helicase ruvB N-term 98.52
PRK04195482 replication factor C large subunit; Provisional 98.49
PRK08727233 hypothetical protein; Validated 98.48
COG4886394 Leucine-rich repeat (LRR) protein [Function unknow 98.47
PRK08084235 DNA replication initiation factor; Provisional 98.46
PF1385561 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF 98.46
TIGR02903615 spore_lon_C ATP-dependent protease, Lon family. Me 98.44
KOG2120419 consensus SCF ubiquitin ligase, Skp2 component [Po 98.44
KOG2028554 consensus ATPase related to the helicase subunit o 98.43
PTZ00202550 tuzin; Provisional 98.43
KOG2120419 consensus SCF ubiquitin ligase, Skp2 component [Po 98.42
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 98.4
PF13173128 AAA_14: AAA domain 98.39
cd01128249 rho_factor Transcription termination factor rho is 98.38
KOG1909382 consensus Ran GTPase-activating protein [RNA proce 98.38
KOG0531414 consensus Protein phosphatase 1, regulatory subuni 98.37
PRK12402337 replication factor C small subunit 2; Reviewed 98.35
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 98.35
PF1385561 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF 98.34
PRK09087226 hypothetical protein; Validated 98.32
PRK07003830 DNA polymerase III subunits gamma and tau; Validat 98.32
PRK08903227 DnaA regulatory inactivator Hda; Validated 98.32
COG3903414 Predicted ATPase [General function prediction only 98.32
PRK14949 944 DNA polymerase III subunits gamma and tau; Provisi 98.31
PRK00440319 rfc replication factor C small subunit; Reviewed 98.3
PRK14963504 DNA polymerase III subunits gamma and tau; Provisi 98.3
PRK12323700 DNA polymerase III subunits gamma and tau; Provisi 98.29
PF13191185 AAA_16: AAA ATPase domain; PDB: 2V1U_A. 98.28
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 98.28
KOG1859 1096 consensus Leucine-rich repeat proteins [General fu 98.26
PRK14960702 DNA polymerase III subunits gamma and tau; Provisi 98.25
PRK05564313 DNA polymerase III subunit delta'; Validated 98.25
PRK14962472 DNA polymerase III subunits gamma and tau; Provisi 98.25
PLN03150623 hypothetical protein; Provisional 98.24
PRK09112351 DNA polymerase III subunit delta'; Validated 98.21
TIGR02397355 dnaX_nterm DNA polymerase III, subunit gamma and t 98.2
PRK14957546 DNA polymerase III subunits gamma and tau; Provisi 98.2
KOG2982418 consensus Uncharacterized conserved protein [Funct 98.2
PLN03025319 replication factor C subunit; Provisional 98.2
PRK09376416 rho transcription termination factor Rho; Provisio 98.19
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 98.18
PRK13341725 recombination factor protein RarA/unknown domain f 98.18
PRK14956484 DNA polymerase III subunits gamma and tau; Provisi 98.18
COG1126240 GlnQ ABC-type polar amino acid transport system, A 98.18
PRK06645507 DNA polymerase III subunits gamma and tau; Validat 98.17
PRK14964491 DNA polymerase III subunits gamma and tau; Provisi 98.16
PRK05896605 DNA polymerase III subunits gamma and tau; Validat 98.15
KOG1909382 consensus Ran GTPase-activating protein [RNA proce 98.13
PRK07940394 DNA polymerase III subunit delta'; Validated 98.13
PLN03150623 hypothetical protein; Provisional 98.12
PRK14951618 DNA polymerase III subunits gamma and tau; Provisi 98.11
TIGR01242364 26Sp45 26S proteasome subunit P45 family. Many pro 98.1
PRK07994647 DNA polymerase III subunits gamma and tau; Validat 98.08
PRK05642234 DNA replication initiation factor; Validated 98.07
TIGR00767415 rho transcription termination factor Rho. Members 98.06
PRK07471365 DNA polymerase III subunit delta'; Validated 98.06
PRK08691709 DNA polymerase III subunits gamma and tau; Validat 98.06
PRK14958509 DNA polymerase III subunits gamma and tau; Provisi 98.06
COG2884223 FtsE Predicted ATPase involved in cell division [C 98.05
COG1121254 ZnuC ABC-type Mn/Zn transport systems, ATPase comp 98.04
PF1279944 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ 98.03
COG1136226 SalX ABC-type antimicrobial peptide transport syst 98.03
PRK14955397 DNA polymerase III subunits gamma and tau; Provisi 98.01
PRK14087450 dnaA chromosomal replication initiation protein; P 98.0
PRK14969527 DNA polymerase III subunits gamma and tau; Provisi 98.0
COG2255332 RuvB Holliday junction resolvasome, helicase subun 97.98
PRK14970367 DNA polymerase III subunits gamma and tau; Provisi 97.97
PRK09111598 DNA polymerase III subunits gamma and tau; Validat 97.97
KOG2982418 consensus Uncharacterized conserved protein [Funct 97.95
PRK14952584 DNA polymerase III subunits gamma and tau; Provisi 97.95
PF05621302 TniB: Bacterial TniB protein; InterPro: IPR008868 97.94
PRK03992389 proteasome-activating nucleotidase; Provisional 97.94
PRK07764824 DNA polymerase III subunits gamma and tau; Validat 97.94
PF1279944 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_ 97.93
PRK14959624 DNA polymerase III subunits gamma and tau; Provisi 97.92
PRK14954620 DNA polymerase III subunits gamma and tau; Provisi 97.91
PRK14088440 dnaA chromosomal replication initiation protein; P 97.91
KOG2227529 consensus Pre-initiation complex, subunit CDC6, AA 97.91
PTZ00361438 26 proteosome regulatory subunit 4-like protein; P 97.91
PRK06620214 hypothetical protein; Validated 97.9
TIGR00678188 holB DNA polymerase III, delta' subunit. At positi 97.9
PRK07133725 DNA polymerase III subunits gamma and tau; Validat 97.88
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 97.86
KOG2543438 consensus Origin recognition complex, subunit 5 [R 97.86
PRK15386426 type III secretion protein GogB; Provisional 97.85
CHL00181287 cbbX CbbX; Provisional 97.84
PRK14953486 DNA polymerase III subunits gamma and tau; Provisi 97.84
TIGR03345852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 97.83
KOG0989346 consensus Replication factor C, subunit RFC4 [Repl 97.82
PRK14971614 DNA polymerase III subunits gamma and tau; Provisi 97.82
cd03222177 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi 97.81
PRK11331459 5-methylcytosine-specific restriction enzyme subun 97.81
PRK15386426 type III secretion protein GogB; Provisional 97.81
PHA02544316 44 clamp loader, small subunit; Provisional 97.79
KOG1859 1096 consensus Leucine-rich repeat proteins [General fu 97.79
cd03238176 ABC_UvrA The excision repair protein UvrA; Nucleot 97.79
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 97.79
TIGR00362405 DnaA chromosomal replication initiator protein Dna 97.78
cd03247178 ABCC_cytochrome_bd The CYD subfamily implicated in 97.78
PRK06305451 DNA polymerase III subunits gamma and tau; Validat 97.77
PRK00149450 dnaA chromosomal replication initiation protein; R 97.77
cd03223166 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass 97.76
PRK14950585 DNA polymerase III subunits gamma and tau; Provisi 97.76
PTZ00454398 26S protease regulatory subunit 6B-like protein; P 97.76
COG1120258 FepC ABC-type cobalamin/Fe3+-siderophores transpor 97.75
PF14516331 AAA_35: AAA-like domain 97.75
PRK08451535 DNA polymerase III subunits gamma and tau; Validat 97.75
cd03214180 ABC_Iron-Siderophores_B12_Hemin ABC transporters, 97.75
PRK14948620 DNA polymerase III subunits gamma and tau; Provisi 97.74
cd03216163 ABC_Carb_Monos_I This family represents the domain 97.72
cd03228171 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein 97.71
cd03230173 ABC_DR_subfamily_A This family of ATP-binding prot 97.7
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 97.69
PRK12422445 chromosomal replication initiation protein; Provis 97.68
cd03246173 ABCC_Protease_Secretion This family represents the 97.68
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 97.66
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 97.65
PRK14086617 dnaA chromosomal replication initiation protein; P 97.65
COG1116248 TauB ABC-type nitrate/sulfonate/bicarbonate transp 97.64
PRK14965576 DNA polymerase III subunits gamma and tau; Provisi 97.64
COG0396251 sufC Cysteine desulfurase activator ATPase [Posttr 97.64
PRK13539207 cytochrome c biogenesis protein CcmA; Provisional 97.63
COG3267269 ExeA Type II secretory pathway, component ExeA (pr 97.63
cd03221144 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is 97.62
CHL00095821 clpC Clp protease ATP binding subunit 97.61
PRK06647563 DNA polymerase III subunits gamma and tau; Validat 97.61
smart00382148 AAA ATPases associated with a variety of cellular 97.61
PF10443431 RNA12: RNA12 protein; InterPro: IPR018850 Mitochon 97.6
KOG4579177 consensus Leucine-rich repeat (LRR) protein associ 97.59
cd03269210 ABC_putative_ATPase This subfamily is involved in 97.58
KOG3665 699 consensus ZYG-1-like serine/threonine protein kina 97.58
COG0488530 Uup ATPase components of ABC transporters with dup 97.58
KOG3665 699 consensus ZYG-1-like serine/threonine protein kina 97.56
PRK13543214 cytochrome c biogenesis protein CcmA; Provisional 97.56
TIGR01241495 FtsH_fam ATP-dependent metalloprotease FtsH. HflB( 97.55
cd03225211 ABC_cobalt_CbiO_domain1 Domain I of the ABC compon 97.55
PRK05563559 DNA polymerase III subunits gamma and tau; Validat 97.55
PF05673249 DUF815: Protein of unknown function (DUF815); Inte 97.55
cd03217200 ABC_FeS_Assembly ABC-type transport system involve 97.53
COG1131293 CcmA ABC-type multidrug transport system, ATPase c 97.53
cd03235213 ABC_Metallic_Cations ABC component of the metal-ty 97.52
PRK07399314 DNA polymerase III subunit delta'; Validated 97.51
cd03226205 ABC_cobalt_CbiO_domain2 Domain II of the ABC compo 97.51
cd03229178 ABC_Class3 This class is comprised of all BPD (Bin 97.51
TIGR00960216 3a0501s02 Type II (General) Secretory Pathway (IIS 97.5
TIGR01188302 drrA daunorubicin resistance ABC transporter ATP-b 97.5
cd03237246 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o 97.48
cd03255218 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of 97.48
TIGR03771223 anch_rpt_ABC anchored repeat-type ABC transporter, 97.48
PRK10865857 protein disaggregation chaperone; Provisional 97.47
PRK09580248 sufC cysteine desulfurase ATPase component; Review 97.47
TIGR00763775 lon ATP-dependent protease La. This protein is ind 97.46
cd03220224 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transpo 97.46
TIGR01166190 cbiO cobalt transport protein ATP-binding subunit. 97.45
PRK13538204 cytochrome c biogenesis protein CcmA; Provisional 97.45
cd03265220 ABC_DrrA DrrA is the ATP-binding protein component 97.45
TIGR02324224 CP_lyasePhnL phosphonate C-P lyase system protein 97.45
cd03263220 ABC_subfamily_A The ABCA subfamily mediates the tr 97.45
cd03266218 ABC_NatA_sodium_exporter NatA is the ATPase compon 97.45
PRK09544251 znuC high-affinity zinc transporter ATPase; Review 97.44
cd03250204 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. 97.44
PRK11248255 tauB taurine transporter ATP-binding subunit; Prov 97.43
KOG2123388 consensus Uncharacterized conserved protein [Funct 97.42
TIGR00602637 rad24 checkpoint protein rad24. This family is bas 97.42
PRK11247257 ssuB aliphatic sulfonates transport ATP-binding su 97.42
cd03259213 ABC_Carb_Solutes_like ABC Carbohydrate and Solute 97.42
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 97.42
COG4618580 ArpD ABC-type protease/lipase transport system, AT 97.42
PRK13537306 nodulation ABC transporter NodI; Provisional 97.41
cd03268208 ABC_BcrA_bacitracin_resist The BcrA subfamily repr 97.41
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 97.4
TIGR03740223 galliderm_ABC gallidermin-class lantibiotic protec 97.4
TIGR03346852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 97.39
TIGR03689512 pup_AAA proteasome ATPase. In the Actinobacteria, 97.39
PRK13647274 cbiO cobalt transporter ATP-binding subunit; Provi 97.39
KOG1644233 consensus U2-associated snRNP A' protein [RNA proc 97.38
cd00267157 ABC_ATPase ABC (ATP-binding cassette) transporter 97.38
cd03258233 ABC_MetN_methionine_transporter MetN (also known a 97.38
TIGR03608206 L_ocin_972_ABC putative bacteriocin export ABC tra 97.38
PRK15056272 manganese/iron transporter ATP-binding protein; Pr 97.37
cd03292214 ABC_FtsE_transporter FtsE is a hydrophilic nucleot 97.37
cd03261235 ABC_Org_Solvent_Resistant ABC (ATP-binding cassett 97.37
PRK10787784 DNA-binding ATP-dependent protease La; Provisional 97.36
PRK11264250 putative amino-acid ABC transporter ATP-binding pr 97.36
TIGR02673214 FtsE cell division ATP-binding protein FtsE. This 97.36
cd03215182 ABC_Carb_Monos_II This family represents domain II 97.36
TIGR03522301 GldA_ABC_ATP gliding motility-associated ABC trans 97.35
cd03264211 ABC_drug_resistance_like ABC-type multidrug transp 97.35
PRK08116268 hypothetical protein; Validated 97.35
COG1373398 Predicted ATPase (AAA+ superfamily) [General funct 97.35
KOG4579177 consensus Leucine-rich repeat (LRR) protein associ 97.35
PRK15064530 ABC transporter ATP-binding protein; Provisional 97.35
TIGR03864236 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, 97.34
cd03301213 ABC_MalK_N The N-terminal ATPase domain of the mal 97.34
cd03369207 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-ty 97.34
COG0488530 Uup ATPase components of ABC transporters with dup 97.33
PRK10247225 putative ABC transporter ATP-binding protein YbbL; 97.33
cd03218232 ABC_YhbG The ABC transporters belonging to the Yhb 97.33
TIGR02211221 LolD_lipo_ex lipoprotein releasing system, ATP-bin 97.32
PRK08118167 topology modulation protein; Reviewed 97.32
COG1222406 RPT1 ATP-dependent 26S proteasome regulatory subun 97.32
PRK13409590 putative ATPase RIL; Provisional 97.31
COG0593408 DnaA ATPase involved in DNA replication initiation 97.31
PRK10584228 putative ABC transporter ATP-binding protein YbbA; 97.31
cd03236255 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 o 97.31
COG5238388 RNA1 Ran GTPase-activating protein (RanGAP) involv 97.3
cd03213194 ABCG_EPDR ABCG transporters are involved in eye pi 97.3
PRK13540200 cytochrome c biogenesis protein CcmA; Provisional 97.29
COG3840231 ThiQ ABC-type thiamine transport system, ATPase co 97.29
PRK11629233 lolD lipoprotein transporter ATP-binding subunit; 97.29
cd03231201 ABC_CcmA_heme_exporter CcmA, the ATP-binding compo 97.29
TIGR01189198 ccmA heme ABC exporter, ATP-binding protein CcmA. 97.29
TIGR01288303 nodI ATP-binding ABC transporter family nodulation 97.28
PRK10908222 cell division protein FtsE; Provisional 97.28
cd03267236 ABC_NatA_like Similar in sequence to NatA, this is 97.28
cd03297214 ABC_ModC_molybdenum_transporter ModC is an ABC-typ 97.28
cd03244221 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. 97.28
PRK13651305 cobalt transporter ATP-binding subunit; Provisiona 97.27
PRK13536340 nodulation factor exporter subunit NodI; Provision 97.27
cd03296239 ABC_CysA_sulfate_importer Part of the ABC transpor 97.27
PRK13649280 cbiO cobalt transporter ATP-binding subunit; Provi 97.27
PRK14250241 phosphate ABC transporter ATP-binding protein; Pro 97.27
PRK11124242 artP arginine transporter ATP-binding subunit; Pro 97.27
CHL00131252 ycf16 sulfate ABC transporter protein; Validated 97.26
cd03219236 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans 97.26
cd03232192 ABC_PDR_domain2 The pleiotropic drug resistance-li 97.25
TIGR01277213 thiQ thiamine ABC transporter, ATP-binding protein 97.25
cd03245220 ABCC_bacteriocin_exporters ABC-type bacteriocin ex 97.24
COG1117253 PstB ABC-type phosphate transport system, ATPase c 97.24
PRK10418254 nikD nickel transporter ATP-binding protein NikD; 97.24
COG1122235 CbiO ABC-type cobalt transport system, ATPase comp 97.24
PRK10619257 histidine/lysine/arginine/ornithine transporter su 97.24
cd03256241 ABC_PhnC_transporter ABC-type phosphate/phosphonat 97.23
cd03254229 ABCC_Glucan_exporter_like Glucan exporter ATP-bind 97.23
COG1135339 AbcC ABC-type metal ion transport system, ATPase c 97.23
KOG1644233 consensus U2-associated snRNP A' protein [RNA proc 97.23
TIGR01978243 sufC FeS assembly ATPase SufC. SufC is part of the 97.22
TIGR02314343 ABC_MetN D-methionine ABC transporter, ATP-binding 97.22
PRK13545549 tagH teichoic acids export protein ATP-binding sub 97.22
TIGR01184230 ntrCD nitrate transport ATP-binding subunits C and 97.22
PRK15093330 antimicrobial peptide ABC transporter ATP-binding 97.21
TIGR02770230 nickel_nikD nickel import ATP-binding protein NikD 97.21
PRK13541195 cytochrome c biogenesis protein CcmA; Provisional 97.21
PRK11300255 livG leucine/isoleucine/valine transporter ATP-bin 97.21
PRK13648269 cbiO cobalt transporter ATP-binding subunit; Provi 97.21
PRK05707328 DNA polymerase III subunit delta'; Validated 97.21
PRK12608380 transcription termination factor Rho; Provisional 97.21
CHL00176638 ftsH cell division protein; Validated 97.2
TIGR02315243 ABC_phnC phosphonate ABC transporter, ATP-binding 97.2
PRK13650279 cbiO cobalt transporter ATP-binding subunit; Provi 97.2
PRK11153343 metN DL-methionine transporter ATP-binding subunit 97.2
PRK13643288 cbiO cobalt transporter ATP-binding subunit; Provi 97.2
PRK11701258 phnK phosphonate C-P lyase system protein PhnK; Pr 97.19
PRK08181269 transposase; Validated 97.19
cd03262213 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- 97.19
cd03298211 ABC_ThiQ_thiamine_transporter ABC-type thiamine tr 97.19
cd03294269 ABC_Pro_Gly_Bertaine This family comprises the gly 97.19
PRK13409590 putative ATPase RIL; Provisional 97.19
COG4133209 CcmA ABC-type transport system involved in cytochr 97.18
cd03283199 ABC_MutS-like MutS-like homolog in eukaryotes. The 97.18
cd03295242 ABC_OpuCA_Osmoprotection OpuCA is a the ATP bindin 97.18
cd03224222 ABC_TM1139_LivF_branched LivF (TM1139) is part of 97.17
PRK13644274 cbiO cobalt transporter ATP-binding subunit; Provi 97.17
PRK13638271 cbiO cobalt transporter ATP-binding subunit; Provi 97.17
PRK13641287 cbiO cobalt transporter ATP-binding subunit; Provi 97.17
PRK13546264 teichoic acids export protein ATP-binding subunit; 97.16
PRK15439510 autoinducer 2 ABC transporter ATP-binding protein 97.16
PRK11650356 ugpC glycerol-3-phosphate transporter ATP-binding 97.16
PRK12377248 putative replication protein; Provisional 97.16
PRK09493240 glnQ glutamine ABC transporter ATP-binding protein 97.15
KOG0733802 consensus Nuclear AAA ATPase (VCP subfamily) [Post 97.14
PRK14269246 phosphate ABC transporter ATP-binding protein; Pro 97.14
cd03290218 ABCC_SUR1_N The SUR domain 1. The sulfonylurea rec 97.14
PRK07261171 topology modulation protein; Provisional 97.14
cd03253236 ABCC_ATM1_transporter ATM1 is an ABC transporter t 97.14
PRK10636638 putative ABC transporter ATP-binding protein; Prov 97.14
KOG1514767 consensus Origin recognition complex, subunit 1, a 97.14
TIGR02142354 modC_ABC molybdenum ABC transporter, ATP-binding p 97.13
PRK11147635 ABC transporter ATPase component; Reviewed 97.13
PRK13646286 cbiO cobalt transporter ATP-binding subunit; Provi 97.12
PRK10536262 hypothetical protein; Provisional 97.12
PRK11144352 modC molybdate transporter ATP-binding protein; Pr 97.12
PRK10938490 putative molybdenum transport ATP-binding protein 97.12
TIGR03411242 urea_trans_UrtD urea ABC transporter, ATP-binding 97.11
cd03249238 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) 97.11
PRK11000369 maltose/maltodextrin transporter ATP-binding prote 97.11
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 97.11
COG4555245 NatA ABC-type Na+ transport system, ATPase compone 97.11
cd03251234 ABCC_MsbA MsbA is an essential ABC transporter, cl 97.11
PRK13639275 cbiO cobalt transporter ATP-binding subunit; Provi 97.1
PRK13631320 cbiO cobalt transporter ATP-binding subunit; Provi 97.1
COG4181228 Predicted ABC-type transport system involved in ly 97.1
PRK10575265 iron-hydroxamate transporter ATP-binding subunit; 97.09
COG2274709 SunT ABC-type bacteriocin/lantibiotic exporters, c 97.09
KOG0741744 consensus AAA+-type ATPase [Posttranslational modi 97.09
PRK13634290 cbiO cobalt transporter ATP-binding subunit; Provi 97.09
PRK10895241 lipopolysaccharide ABC transporter ATP-binding pro 97.09
TIGR01069771 mutS2 MutS2 family protein. Function of MutS2 is u 97.09
PRK14247250 phosphate ABC transporter ATP-binding protein; Pro 97.09
PRK09536402 btuD corrinoid ABC transporter ATPase; Reviewed 97.08
PRK14254285 phosphate ABC transporter ATP-binding protein; Pro 97.08
KOG2004906 consensus Mitochondrial ATP-dependent protease PIM 97.07
COG4598256 HisP ABC-type histidine transport system, ATPase c 97.07
TIGR03873256 F420-0_ABC_ATP proposed F420-0 ABC transporter, AT 97.07
PRK13652277 cbiO cobalt transporter ATP-binding subunit; Provi 97.07
PF00004132 AAA: ATPase family associated with various cellula 97.06
cd03289275 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic 97.06
COG4988559 CydD ABC-type transport system involved in cytochr 97.05
PRK15177213 Vi polysaccharide export ATP-binding protein VexC; 97.05
TIGR03258362 PhnT 2-aminoethylphosphonate ABC transport system, 97.05
cd03257228 ABC_NikE_OppD_transporters The ABC transporter sub 97.04
PRK14259269 phosphate ABC transporter ATP-binding protein; Pro 97.04
PRK10771232 thiQ thiamine transporter ATP-binding subunit; Pro 97.04
PRK13637287 cbiO cobalt transporter ATP-binding subunit; Provi 97.04
PRK11432351 fbpC ferric transporter ATP-binding subunit; Provi 97.03
TIGR02323253 CP_lyasePhnK phosphonate C-P lyase system protein 97.03
cd03252237 ABCC_Hemolysin The ABC-transporter hemolysin B is 97.03
PRK13548258 hmuV hemin importer ATP-binding subunit; Provision 97.03
PRK10636638 putative ABC transporter ATP-binding protein; Prov 97.03
TIGR03005252 ectoine_ehuA ectoine/hydroxyectoine ABC transporte 97.02
cd03260227 ABC_PstB_phosphate_transporter Phosphate uptake is 97.02
PRK11308327 dppF dipeptide transporter ATP-binding subunit; Pr 97.02
PRK15439510 autoinducer 2 ABC transporter ATP-binding protein 97.02
cd03285222 ABC_MSH2_euk MutS2 homolog in eukaryotes. The MutS 97.01
PRK11231255 fecE iron-dicitrate transporter ATP-binding subuni 97.01
KOG0991333 consensus Replication factor C, subunit RFC2 [Repl 97.01
PRK13635279 cbiO cobalt transporter ATP-binding subunit; Provi 97.01
TIGR00968237 3a0106s01 sulfate ABC transporter, ATP-binding pro 97.0
smart00763361 AAA_PrkA PrkA AAA domain. This is a family of PrkA 97.0
cd03300232 ABC_PotA_N PotA is an ABC-type transporter and the 97.0
PRK14264305 phosphate ABC transporter ATP-binding protein; Pro 97.0
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 96.99
TIGR03265353 PhnT2 putative 2-aminoethylphosphonate ABC transpo 96.99
PRK10762501 D-ribose transporter ATP binding protein; Provisio 96.99
PRK14235267 phosphate transporter ATP-binding protein; Provisi 96.99
TIGR03410230 urea_trans_UrtE urea ABC transporter, ATP-binding 96.98
PRK12727559 flagellar biosynthesis regulator FlhF; Provisional 96.98
cd03299235 ABC_ModC_like Archeal protein closely related to M 96.98
TIGR00972247 3a0107s01c2 phosphate ABC transporter, ATP-binding 96.98
PRK14242253 phosphate transporter ATP-binding protein; Provisi 96.97
PRK11831269 putative ABC transporter ATP-binding protein YrbF; 96.97
PRK11022326 dppD dipeptide transporter ATP-binding subunit; Pr 96.97
PRK11819556 putative ABC transporter ATP-binding protein; Revi 96.97
PRK13632271 cbiO cobalt transporter ATP-binding subunit; Provi 96.96
cd03248226 ABCC_TAP TAP, the Transporter Associated with Anti 96.96
PRK15112267 antimicrobial peptide ABC system ATP-binding prote 96.96
PRK13657588 cyclic beta-1,2-glucan ABC transporter; Provisiona 96.96
COG1118345 CysA ABC-type sulfate/molybdate transport systems, 96.96
PRK14275286 phosphate ABC transporter ATP-binding protein; Pro 96.94
PRK04296190 thymidine kinase; Provisional 96.94
COG0466782 Lon ATP-dependent Lon protease, bacterial type [Po 96.94
PRK09452375 potA putrescine/spermidine ABC transporter ATPase 96.93
PRK14273254 phosphate ABC transporter ATP-binding protein; Pro 96.93
PRK13640282 cbiO cobalt transporter ATP-binding subunit; Provi 96.92
TIGR02769265 nickel_nikE nickel import ATP-binding protein NikE 96.92
PRK09700510 D-allose transporter ATP-binding protein; Provisio 96.92
PRK10419268 nikE nickel transporter ATP-binding protein NikE; 96.92
PRK14246257 phosphate ABC transporter ATP-binding protein; Pro 96.91
PRK13645289 cbiO cobalt transporter ATP-binding subunit; Provi 96.91
PRK13636283 cbiO cobalt transporter ATP-binding subunit; Provi 96.9
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 96.9
COG1123539 ATPase components of various ABC-type transport sy 96.9
PRK10744260 pstB phosphate transporter ATP-binding protein; Pr 96.9
COG1119257 ModF ABC-type molybdenum transport system, ATPase 96.9
PRK15064530 ABC transporter ATP-binding protein; Provisional 96.89
KOG0927614 consensus Predicted transporter (ABC superfamily) 96.88
PRK11607377 potG putrescine transporter ATP-binding subunit; P 96.88
PRK10070400 glycine betaine transporter ATP-binding subunit; P 96.88
PRK10762501 D-ribose transporter ATP binding protein; Provisio 96.88
PRK10851353 sulfate/thiosulfate transporter subunit; Provision 96.87
PF04665241 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 96.87
PRK14265274 phosphate ABC transporter ATP-binding protein; Pro 96.87
cd03291282 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic 96.87
KOG2739260 consensus Leucine-rich acidic nuclear protein [Cel 96.86
PRK13633280 cobalt transporter ATP-binding subunit; Provisiona 96.86
cd03288257 ABCC_SUR2 The SUR domain 2. The sulfonylurea recep 96.86
PRK14249251 phosphate ABC transporter ATP-binding protein; Pro 96.86
PRK10261623 glutathione transporter ATP-binding protein; Provi 96.86
PRK14261253 phosphate ABC transporter ATP-binding protein; Pro 96.85
PRK14245250 phosphate ABC transporter ATP-binding protein; Pro 96.85
PLN03073718 ABC transporter F family; Provisional 96.85
TIGR01186363 proV glycine betaine/L-proline transport ATP bindi 96.85
PRK08769319 DNA polymerase III subunit delta'; Validated 96.84
PRK10982491 galactose/methyl galaxtoside transporter ATP-bindi 96.84
PRK10253265 iron-enterobactin transporter ATP-binding protein; 96.84
PRK11288501 araG L-arabinose transporter ATP-binding protein; 96.84
COG0542786 clpA ATP-binding subunits of Clp protease and DnaK 96.84
PRK11160574 cysteine/glutathione ABC transporter membrane/ATP- 96.83
PRK10982491 galactose/methyl galaxtoside transporter ATP-bindi 96.82
PRK14237267 phosphate transporter ATP-binding protein; Provisi 96.82
PRK10789569 putative multidrug transporter membrane\ATP-bindin 96.82
PRK14268258 phosphate ABC transporter ATP-binding protein; Pro 96.82
PRK14241258 phosphate transporter ATP-binding protein; Provisi 96.82
PRK13642277 cbiO cobalt transporter ATP-binding subunit; Provi 96.81
PRK11147635 ABC transporter ATPase component; Reviewed 96.81
COG4619223 ABC-type uncharacterized transport system, ATPase 96.8
PRK14251251 phosphate ABC transporter ATP-binding protein; Pro 96.8
PRK09700510 D-allose transporter ATP-binding protein; Provisio 96.8
TIGR03269520 met_CoM_red_A2 methyl coenzyme M reductase system, 96.79
PRK09473330 oppD oligopeptide transporter ATP-binding componen 96.78
COG1127263 Ttg2A ABC-type transport system involved in resist 96.78
KOG2739260 consensus Leucine-rich acidic nuclear protein [Cel 96.78
PRK14258261 phosphate ABC transporter ATP-binding protein; Pro 96.78
PRK14256252 phosphate ABC transporter ATP-binding protein; Pro 96.78
PRK06871325 DNA polymerase III subunit delta'; Validated 96.78
PRK11614237 livF leucine/isoleucine/valine transporter ATP-bin 96.77
TIGR03719552 ABC_ABC_ChvD ATP-binding cassette protein, ChvD fa 96.77
PRK07952244 DNA replication protein DnaC; Validated 96.77
cd03233202 ABC_PDR_domain1 The pleiotropic drug resistance (P 96.77
KOG2228408 consensus Origin recognition complex, subunit 4 [R 96.76
TIGR00958711 3a01208 Conjugate Transporter-2 (CT2) Family prote 96.76
cd03281213 ABC_MSH5_euk MutS5 homolog in eukaryotes. The MutS 96.76
PRK13695174 putative NTPase; Provisional 96.75
PF00448196 SRP54: SRP54-type protein, GTPase domain; InterPro 96.75
COG3839338 MalK ABC-type sugar transport systems, ATPase comp 96.75
CHL00195489 ycf46 Ycf46; Provisional 96.75
PRK14271276 phosphate ABC transporter ATP-binding protein; Pro 96.75
PRK13549506 xylose transporter ATP-binding subunit; Provisiona 96.74
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 96.74
PRK09984262 phosphonate/organophosphate ester transporter subu 96.74
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 96.74
TIGR03796710 NHPM_micro_ABC1 NHPM bacteriocin system ABC transp 96.73
PRK00409782 recombination and DNA strand exchange inhibitor pr 96.73
PRK11288501 araG L-arabinose transporter ATP-binding protein; 96.73
PRK14272252 phosphate ABC transporter ATP-binding protein; Pro 96.73
PRK13549506 xylose transporter ATP-binding subunit; Provisiona 96.73
PRK09183259 transposase/IS protein; Provisional 96.73
PRK08058329 DNA polymerase III subunit delta'; Validated 96.73
PRK14274259 phosphate ABC transporter ATP-binding protein; Pro 96.73
PRK14270251 phosphate ABC transporter ATP-binding protein; Pro 96.72
PRK15079331 oligopeptide ABC transporter ATP-binding protein O 96.72
PRK14244251 phosphate ABC transporter ATP-binding protein; Pro 96.72
PRK14248268 phosphate ABC transporter ATP-binding protein; Pro 96.72
PLN03211659 ABC transporter G-25; Provisional 96.71
PRK06067234 flagellar accessory protein FlaH; Validated 96.7
PRK06921266 hypothetical protein; Provisional 96.7
TIGR02633500 xylG D-xylose ABC transporter, ATP-binding protein 96.7
PRK09361225 radB DNA repair and recombination protein RadB; Pr 96.69
TIGR02633500 xylG D-xylose ABC transporter, ATP-binding protein 96.68
PRK14267253 phosphate ABC transporter ATP-binding protein; Pro 96.68
KOG1947482 consensus Leucine rich repeat proteins, some prote 96.68
KOG0062582 consensus ATPase component of ABC transporters wit 96.68
PRK14263261 phosphate ABC transporter ATP-binding protein; Pro 96.67
PRK14240250 phosphate transporter ATP-binding protein; Provisi 96.67
TIGR03415382 ABC_choXWV_ATP choline ABC transporter, ATP-bindin 96.66
COG3842352 PotA ABC-type spermidine/putrescine transport syst 96.66
PRK06090319 DNA polymerase III subunit delta'; Validated 96.66
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=8.2e-99  Score=878.25  Aligned_cols=841  Identities=37%  Similarity=0.599  Sum_probs=685.2

Q ss_pred             CcccccchhccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHH
Q 045686            1 MEILINPIMDYLVCPLCGVISKHCGYVCGLTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEVNGWLESAQFML   80 (885)
Q Consensus         1 me~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~l~~i~~~~~~ae~~~~~~~~~v~~Wl~~~~~~~   80 (885)
                      |++.++..   +++ +++.+.+++..+.++++.+..|++++..|+.++.|+       +.++.+ ...+..|.+.+++++
T Consensus         1 ~~~~~s~~---~~~-~~~~l~~~~~~~~~~~~~i~~Lk~~L~~l~~~l~d~-------~a~~~~-~~~~~~~~e~~~~~~   68 (889)
T KOG4658|consen    1 MGACVSFG---VEK-LDQLLNRESECLDGKDNYILELKENLKALQSALEDL-------DAKRDD-LERRVNWEEDVGDLV   68 (889)
T ss_pred             CCeEEEEe---hhh-HHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-------Hhhcch-HHHHHHHHHHHHHHH
Confidence            44444443   445 666788899999999999999999999999987764       444322 566789999999999


Q ss_pred             HHHHHHHHhchHHhh----------------hhhccCcccCCCccccchhhHHHHHHHHHHHHHHhcCcceeeec-CCCC
Q 045686           81 REVDGILQRGDEEIQ----------------KTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIAE-RPPR  143 (885)
Q Consensus        81 ~~~ed~ld~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~  143 (885)
                      |+++|+++.+.....                +-|..+.| ..+....+.+++++...++.++.+..++.|..++. ..+.
T Consensus        69 ~~~e~~~~~~~v~~~~~~~~~~l~~~~~~~~~~c~~~~~-~~~~~~~~~~~~rv~~~l~~ve~l~~~~~~~~~~~~~~~~  147 (889)
T KOG4658|consen   69 YLAEDIIWLFLVEEIERKANDLLSTRSVERQRLCLCGFC-SKNVSDSYKYGKRVSKVLREVESLGSKGVFEVVGESLDPR  147 (889)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHhhhhHHHHHHHhhhhhH-hHhhhhhHhHHHHHHHHHHHHHHhccccceecccccccch
Confidence            999999998864321                12222333 44556677888999999999999887776766553 2222


Q ss_pred             CCccccCCCCc--cchhHHHHHHHHHhhcCCCeEEEEEcCCCCcHHHHHHHHHhhhccCCCCccEEEEEEEcCcccHHHH
Q 045686          144 APVEERPIGKT--VGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKKLNNKFRDTGHDFDLVIWVKVSRDANLEKI  221 (885)
Q Consensus       144 ~~~~~~~~~~~--vgr~~~~~~l~~~L~~~~~~vi~I~G~gG~GKTtLa~~v~~~~~~~~~~f~~~~wv~v~~~~~~~~~  221 (885)
                      .....+|..+.  ||.+..++++.+.|.+++..+++|+||||+||||||+.++|+....+.+|+.++||+||++++...+
T Consensus       148 ~~~e~~~~~~~~~VG~e~~~~kl~~~L~~d~~~iv~i~GMGGvGKTTL~~qi~N~~~~v~~~Fd~~iWV~VSk~f~~~~i  227 (889)
T KOG4658|consen  148 EKVETRPIQSESDVGLETMLEKLWNRLMEDDVGIVGIYGMGGVGKTTLARQIFNKFDEVGNHFDGVIWVVVSKEFTTRKI  227 (889)
T ss_pred             hhcccCCCCccccccHHHHHHHHHHHhccCCCCEEEEECCCcccHHHHHHHHhcccchhcccCceEEEEEEcccccHHhH
Confidence            22333333223  9999999999999988778999999999999999999999999734699999999999999999999


Q ss_pred             HHHHHHHcCCCccccCCCChhHHHHHHHHHhcCCCeEEEEecCCCccccccccccccccccCCCCCEEEEEcCChhHHhh
Q 045686          222 QESILRRFEIPDQMWIGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGE  301 (885)
Q Consensus       222 ~~~i~~~l~~~~~~~~~~~~~~~~~~l~~~l~~k~~LlVLDdv~~~~~~~~~~~~~~l~~~~~~gs~IivTTR~~~v~~~  301 (885)
                      +.+|++.++.....+.....++.+..+.+.|++|||+|||||||+..+|+.++.+++   ....||+|++|||+++||..
T Consensus       228 q~~Il~~l~~~~~~~~~~~~~~~~~~i~~~L~~krfllvLDDIW~~~dw~~I~~~~p---~~~~g~KvvlTTRs~~V~~~  304 (889)
T KOG4658|consen  228 QQTILERLGLLDEEWEDKEEDELASKLLNLLEGKRFLLVLDDIWEEVDWDKIGVPFP---SRENGSKVVLTTRSEEVCGR  304 (889)
T ss_pred             HHHHHHHhccCCcccchhhHHHHHHHHHHHhccCceEEEEecccccccHHhcCCCCC---CccCCeEEEEEeccHhhhhc
Confidence            999999999866555555668899999999999999999999999999999999999   77789999999999999998


Q ss_pred             -hcccceeeccCCChHHHHHHHHHHhcCcccCCccchHHHHHHHHHHhCCchhHHHHHHHHHhcCCChhhHHHHHHHHhc
Q 045686          302 -MGARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQR  380 (885)
Q Consensus       302 -~~~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai~~~~~~l~~~~~~~~w~~~~~~l~~  380 (885)
                       +++...+++++|+++|||.||++.++......++.++++|++|+++|+|+|||++++|+.|+.+.+..+|+.+.+.+.+
T Consensus       305 ~m~~~~~~~v~~L~~~eaW~LF~~~v~~~~~~~~~~i~~lak~v~~kC~GLPLAl~viG~~ma~K~t~~eW~~~~~~l~s  384 (889)
T KOG4658|consen  305 AMGVDYPIEVECLTPEEAWDLFQKKVGPNTLGSHPDIEELAKEVAEKCGGLPLALNVLGGLLACKKTVQEWRRALNVLKS  384 (889)
T ss_pred             cccCCccccccccCccccHHHHHHhhccccccccccHHHHHHHHHHHhCChHHHHHHHHHHhcCCCcHHHHHHHHccccc
Confidence             8888899999999999999999999988777777799999999999999999999999999999999999999999988


Q ss_pred             C-cccccCCCCcccccccccccccccchhhhHHhhhccCCCCceecHHHHHHHHHhcCcCCCC----CCCChHHHHHHHH
Q 045686          381 Y-PFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQLWIGEGFLNGI----SPRDQGEYIIESL  455 (885)
Q Consensus       381 ~-~~~~~~~~~~~~~~l~~sy~~L~~~~~k~cfl~~s~fp~~~~i~~~~li~~w~a~g~~~~~----~~~~~~~~~l~~L  455 (885)
                      . ..+.+++.+.+++++.+||++||+ ++|.||+|||+||+||.|+++.|+.+|+||||+.+.    ..++.|++|+++|
T Consensus       385 ~~~~~~~~~~~~i~~iLklSyd~L~~-~lK~CFLycalFPED~~I~~e~Li~yWiaEGfi~~~~~~~~~~d~G~~~i~~L  463 (889)
T KOG4658|consen  385 SLAADFSGMEESILPILKLSYDNLPE-ELKSCFLYCALFPEDYEIKKEKLIEYWIAEGFIDPLDGGETAEDVGYDYIEEL  463 (889)
T ss_pred             cccCCCCchhhhhHHhhhccHhhhhH-HHHHHHHhhccCCcccccchHHHHHHHHhccCcCccccccchhcchHHHHHHH
Confidence            7 566667778999999999999996 599999999999999999999999999999999874    5689999999999


Q ss_pred             HHhcccccCC--CCCCcEEEehhHHHHHHHHhhcCCC--ceEEEEcCCccccccccCcCCccceEEEecccCcccccccc
Q 045686          456 KLACLLERGE--NSEDSVKMHNLIRDMALELASENDN--KTLVLQNNVGSNIESINSFDGWHEAVRLSLWGSSIDFLALV  531 (885)
Q Consensus       456 ~~~~ll~~~~--~~~~~~~mHdlv~~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~i~~~~~~  531 (885)
                      ++++|++..+  +...+|+|||+|||+|.++|++.+.  ++.++.++.+. .+. |....|..+|++++.+|.+..  .+
T Consensus       464 V~~~Ll~~~~~~~~~~~~kmHDvvRe~al~ias~~~~~~e~~iv~~~~~~-~~~-~~~~~~~~~rr~s~~~~~~~~--~~  539 (889)
T KOG4658|consen  464 VRASLLIEERDEGRKETVKMHDVVREMALWIASDFGKQEENQIVSDGVGL-SEI-PQVKSWNSVRRMSLMNNKIEH--IA  539 (889)
T ss_pred             HHHHHHhhcccccceeEEEeeHHHHHHHHHHhccccccccceEEECCcCc-ccc-ccccchhheeEEEEeccchhh--cc
Confidence            9999999876  3468999999999999999996654  33666665555 444 888889999999999999887  67


Q ss_pred             cCCCCchhHHHHHhhcC--CccCCCCchhhhcCCcccEEecCCCCCCCcCchhhhcccccceeeccCCcccccChhhhcc
Q 045686          532 EAPSCPQVRTLLARLTM--LHTLPIPSRFFDSMDALEVLDLSYNLDLNQLPEEIGRLKNLHHLNLSNTSIGCLPTAIKRL  609 (885)
Q Consensus       532 ~~~~~~~Lr~L~l~~~~--l~~~~~~~~~~~~l~~L~~L~Ls~~~~i~~lp~~i~~L~~L~~L~Ls~~~i~~lp~~i~~L  609 (885)
                      ....+++|++|.+.+|.  +..  ++..+|..|+.|++|||++|..+.++|.+|++|.+||||+++++.|..+|.++++|
T Consensus       540 ~~~~~~~L~tLll~~n~~~l~~--is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~L  617 (889)
T KOG4658|consen  540 GSSENPKLRTLLLQRNSDWLLE--ISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNL  617 (889)
T ss_pred             CCCCCCccceEEEeecchhhhh--cCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHH
Confidence            77889999999999995  666  89999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccEeecCCcccccccCCcccccCcccceecccccccccccCcccccccchhhhcCccCCcceeEEEechhhHHhhhCC
Q 045686          610 IKLKVLLLDGIQCHLSIPEGVISSLSSLQVFSCFSTELVELIDPLFNETAILDELNCLEHLNDLSLTLFSTEAVDKLLNS  689 (885)
Q Consensus       610 ~~L~~L~l~~~~~l~~lp~~~i~~L~~L~~L~l~~~~~~~~~~~~~~~~~~l~~l~~L~~L~~L~l~~~~~~~~~~l~~~  689 (885)
                      .+|.+|++..+..+..+| +++..|++||+|.+......       .+...+.++.+|++|+.+.++..+......+...
T Consensus       618 k~L~~Lnl~~~~~l~~~~-~i~~~L~~Lr~L~l~~s~~~-------~~~~~l~el~~Le~L~~ls~~~~s~~~~e~l~~~  689 (889)
T KOG4658|consen  618 KKLIYLNLEVTGRLESIP-GILLELQSLRVLRLPRSALS-------NDKLLLKELENLEHLENLSITISSVLLLEDLLGM  689 (889)
T ss_pred             Hhhheecccccccccccc-chhhhcccccEEEeeccccc-------cchhhHHhhhcccchhhheeecchhHhHhhhhhh
Confidence            999999999998666664 44777999999999876522       1455788889999999998876665444555555


Q ss_pred             CcccccceeEEeccccc--cccchhhhhhccceEEe-eccCccceeecCCCC-Ccc-ccccccEEeeccccCCccccccc
Q 045686          690 PKLQRCIRRLTIESSEL--LSLELGLMLSHLEILRI-KCGFMKRLNIDQGLN-NRP-SFSALRRLSIILCPDIQNLTCLV  764 (885)
Q Consensus       690 ~~~~~~L~~L~l~~~~~--~~~~l~~~~~~L~~L~l-~~~~l~~l~~~~~~~-~~~-~l~~L~~L~L~~c~~l~~l~~l~  764 (885)
                      ..+.+..+.+.+.++..  ....+..+ .+|+.|.+ .|+..+. ...+... ... .|+++.++.+.+|.....+.|..
T Consensus       690 ~~L~~~~~~l~~~~~~~~~~~~~~~~l-~~L~~L~i~~~~~~e~-~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~  767 (889)
T KOG4658|consen  690 TRLRSLLQSLSIEGCSKRTLISSLGSL-GNLEELSILDCGISEI-VIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLL  767 (889)
T ss_pred             HHHHHHhHhhhhcccccceeecccccc-cCcceEEEEcCCCchh-hcccccccchhhhHHHHHHHHhhccccccccchhh
Confidence            54444555666544442  22234444 89999999 5544322 2222211 112 27789999999998888888888


Q ss_pred             cCCCccEEeEeccCCchhhhccccc--CCCccccccccccee-ccccccccccccCCccCCCCccEEeeccCCCCCCcCC
Q 045686          765 HVPSLQFLSLSNCHSLEEIVGTYAS--GSSESRNYFSNLMAV-DLDGLPTLRSICSGTVAFPSLQTLSITGCPSLKKLPF  841 (885)
Q Consensus       765 ~l~~L~~L~L~~~~~l~~l~~~~~~--~~~~~~~~~~~L~~L-~l~~~~~l~~~~~~~~~~p~L~~L~i~~C~~L~~lp~  841 (885)
                      ..|+|+.|.+..|..++++++....  ........|+++..+ .+.+.+.+..+......+++|+.+.+..||+++.+|.
T Consensus       768 f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve~~p~l~~~P~  847 (889)
T KOG4658|consen  768 FAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLKLEELIVEECPKLGKLPL  847 (889)
T ss_pred             ccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCccchhheehhcCcccccCcc
Confidence            8999999999999998888653111  111124566777777 5777777777766666788899999999999999999


Q ss_pred             CCccccCC---ceEEEccHhhhhhcccCcccccccc
Q 045686          842 NSESARRS---LISVRASAEWWNQLEWEDEATKDIF  874 (885)
Q Consensus       842 ~~~~~~~~---l~~i~~~~~~~~~l~w~~~~~~~~~  874 (885)
                      ........   ......+.+|.+.++|+++.++..+
T Consensus       848 ~~~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  883 (889)
T KOG4658|consen  848 LSTLTIVGCEEKLKEYPDGEWLEGVYWEDELTKLRF  883 (889)
T ss_pred             ccccceeccccceeecCCccceeeEEehhhhhhhhc
Confidence            87655444   3444445678889999999998776

>PLN03210 Resistant to P Back     alignment and domain information
>PF00931 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is the NB-ARC domain, a novel signalling motif found in bacteria and eukaryotes, shared by plant resistance gene products and regulators of cell death in animals [] Back     alignment and domain information
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] Back     alignment and domain information
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] Back     alignment and domain information
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] Back     alignment and domain information
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] Back     alignment and domain information
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional Back     alignment and domain information
>PLN03210 Resistant to P Back     alignment and domain information
>KOG0472 consensus Leucine-rich repeat protein [Function unknown] Back     alignment and domain information
>KOG0472 consensus Leucine-rich repeat protein [Function unknown] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional Back     alignment and domain information
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional Back     alignment and domain information
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional Back     alignment and domain information
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] Back     alignment and domain information
>PRK04841 transcriptional regulator MalT; Provisional Back     alignment and domain information
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] Back     alignment and domain information
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] Back     alignment and domain information
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] Back     alignment and domain information
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>COG2909 MalT ATP-dependent transcriptional regulator [Transcription] Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily Back     alignment and domain information
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] Back     alignment and domain information
>PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP Back     alignment and domain information
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed Back     alignment and domain information
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A Back     alignment and domain information
>TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit Back     alignment and domain information
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily Back     alignment and domain information
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A Back     alignment and domain information
>PF05729 NACHT: NACHT domain Back     alignment and domain information
>KOG4341 consensus F-box protein containing LRR [General function prediction only] Back     alignment and domain information
>COG3899 Predicted ATPase [General function prediction only] Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] Back     alignment and domain information
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown] Back     alignment and domain information
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>KOG4341 consensus F-box protein containing LRR [General function prediction only] Back     alignment and domain information
>PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair Back     alignment and domain information
>PRK04195 replication factor C large subunit; Provisional Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown] Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG2028 consensus ATPase related to the helicase subunit of the Holliday junction resolvase [Replication, recombination and repair] Back     alignment and domain information
>PTZ00202 tuzin; Provisional Back     alignment and domain information
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PF13173 AAA_14: AAA domain Back     alignment and domain information
>cd01128 rho_factor Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase Back     alignment and domain information
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] Back     alignment and domain information
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>COG3903 Predicted ATPase [General function prediction only] Back     alignment and domain information
>PRK14949 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] Back     alignment and domain information
>PRK14960 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05564 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PRK09112 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG2982 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>PRK09376 rho transcription termination factor Rho; Provisional Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05896 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] Back     alignment and domain information
>PRK07940 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PLN03150 hypothetical protein; Provisional Back     alignment and domain information
>PRK14951 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR01242 26Sp45 26S proteasome subunit P45 family Back     alignment and domain information
>PRK07994 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK05642 DNA replication initiation factor; Validated Back     alignment and domain information
>TIGR00767 rho transcription termination factor Rho Back     alignment and domain information
>PRK07471 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK08691 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14958 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B Back     alignment and domain information
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>PRK14955 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14087 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK14970 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG2982 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PRK14952 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins Back     alignment and domain information
>PRK03992 proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>PRK07764 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14954 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>KOG2227 consensus Pre-initiation complex, subunit CDC6, AAA+ superfamily ATPase [Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>TIGR00678 holB DNA polymerase III, delta' subunit Back     alignment and domain information
>PRK07133 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>KOG2543 consensus Origin recognition complex, subunit 5 [Replication, recombination and repair] Back     alignment and domain information
>PRK15386 type III secretion protein GogB; Provisional Back     alignment and domain information
>CHL00181 cbbX CbbX; Provisional Back     alignment and domain information
>PRK14953 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>KOG0989 consensus Replication factor C, subunit RFC4 [Replication, recombination and repair] Back     alignment and domain information
>PRK14971 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids Back     alignment and domain information
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional Back     alignment and domain information
>PRK15386 type III secretion protein GogB; Provisional Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] Back     alignment and domain information
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>TIGR00362 DnaA chromosomal replication initiator protein DnaA Back     alignment and domain information
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis Back     alignment and domain information
>PRK06305 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PF14516 AAA_35: AAA-like domain Back     alignment and domain information
>PRK08451 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea Back     alignment and domain information
>PRK14948 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export Back     alignment and domain information
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>PRK12422 chromosomal replication initiation protein; Provisional Back     alignment and domain information
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14086 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14965 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion] Back     alignment and domain information
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>PRK06647 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PF10443 RNA12: RNA12 protein; InterPro: IPR018850 Mitochondrial escape protein 2 (also known as RNA12) plays a role in maintaining the mitochondrial genome and in controlling mtDNA escape [, ] Back     alignment and domain information
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] Back     alignment and domain information
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity Back     alignment and domain information
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] Back     alignment and domain information
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] Back     alignment and domain information
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only] Back     alignment and domain information
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH Back     alignment and domain information
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>PRK05563 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function Back     alignment and domain information
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component Back     alignment and domain information
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters Back     alignment and domain information
>PRK07399 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment Back     alignment and domain information
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein Back     alignment and domain information
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit Back     alignment and domain information
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor Back     alignment and domain information
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) Back     alignment and domain information
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed Back     alignment and domain information
>TIGR00763 lon ATP-dependent protease La Back     alignment and domain information
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export Back     alignment and domain information
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit Back     alignment and domain information
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin Back     alignment and domain information
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL Back     alignment and domain information
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds Back     alignment and domain information
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake Back     alignment and domain information
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed Back     alignment and domain information
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C Back     alignment and domain information
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>KOG2123 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>TIGR00602 rad24 checkpoint protein rad24 Back     alignment and domain information
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional Back     alignment and domain information
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only] Back     alignment and domain information
>PRK13537 nodulation ABC transporter NodI; Provisional Back     alignment and domain information
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>TIGR03689 pup_AAA proteasome ATPase Back     alignment and domain information
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] Back     alignment and domain information
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport Back     alignment and domain information
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group Back     alignment and domain information
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane Back     alignment and domain information
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules Back     alignment and domain information
>PRK10787 DNA-binding ATP-dependent protease La; Provisional Back     alignment and domain information
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional Back     alignment and domain information
>TIGR02673 FtsE cell division ATP-binding protein FtsE Back     alignment and domain information
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos) Back     alignment and domain information
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA Back     alignment and domain information
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>COG1373 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only] Back     alignment and domain information
>PRK15064 ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Back     alignment and domain information
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK Back     alignment and domain information
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1) Back     alignment and domain information
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] Back     alignment and domain information
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional Back     alignment and domain information
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids Back     alignment and domain information
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein Back     alignment and domain information
>PRK08118 topology modulation protein; Reviewed Back     alignment and domain information
>COG1222 RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13409 putative ATPase RIL; Provisional Back     alignment and domain information
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional Back     alignment and domain information
>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor Back     alignment and domain information
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] Back     alignment and domain information
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR) Back     alignment and domain information
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism] Back     alignment and domain information
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter Back     alignment and domain information
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA Back     alignment and domain information
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI Back     alignment and domain information
>PRK10908 cell division protein FtsE; Provisional Back     alignment and domain information
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake Back     alignment and domain information
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB Back     alignment and domain information
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C Back     alignment and domain information
>PRK13651 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13536 nodulation factor exporter subunit NodI; Provisional Back     alignment and domain information
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import Back     alignment and domain information
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>CHL00131 ycf16 sulfate ABC transporter protein; Validated Back     alignment and domain information
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine Back     alignment and domain information
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters Back     alignment and domain information
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional Back     alignment and domain information
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional Back     alignment and domain information
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system Back     alignment and domain information
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein Back     alignment and domain information
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification] Back     alignment and domain information
>TIGR01978 sufC FeS assembly ATPase SufC Back     alignment and domain information
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D Back     alignment and domain information
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD Back     alignment and domain information
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK05707 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK12608 transcription termination factor Rho; Provisional Back     alignment and domain information
>CHL00176 ftsH cell division protein; Validated Back     alignment and domain information
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional Back     alignment and domain information
>PRK08181 transposase; Validated Back     alignment and domain information
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively Back     alignment and domain information
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP Back     alignment and domain information
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea Back     alignment and domain information
>PRK13409 putative ATPase RIL; Provisional Back     alignment and domain information
>COG4133 CcmA ABC-type transport system involved in cytochrome c biogenesis, ATPase component [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd03283 ABC_MutS-like MutS-like homolog in eukaryotes Back     alignment and domain information
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment Back     alignment and domain information
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids Back     alignment and domain information
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional Back     alignment and domain information
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional Back     alignment and domain information
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>KOG0733 consensus Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03290 ABCC_SUR1_N The SUR domain 1 Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria Back     alignment and domain information
>PRK10636 putative ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG1514 consensus Origin recognition complex, subunit 1, and related proteins [Replication, recombination and repair] Back     alignment and domain information
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK11147 ABC transporter ATPase component; Reviewed Back     alignment and domain information
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10536 hypothetical protein; Provisional Back     alignment and domain information
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional Back     alignment and domain information
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD Back     alignment and domain information
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1 Back     alignment and domain information
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins Back     alignment and domain information
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] Back     alignment and domain information
>KOG0741 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01069 mutS2 MutS2 family protein Back     alignment and domain information
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed Back     alignment and domain information
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG2004 consensus Mitochondrial ATP-dependent protease PIM1/LON [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2 Back     alignment and domain information
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional Back     alignment and domain information
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT Back     alignment and domain information
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE) Back     alignment and domain information
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK Back     alignment and domain information
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E Back     alignment and domain information
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10636 putative ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient Back     alignment and domain information
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional Back     alignment and domain information
>cd03285 ABC_MSH2_euk MutS2 homolog in eukaryotes Back     alignment and domain information
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional Back     alignment and domain information
>KOG0991 consensus Replication factor C, subunit RFC2 [Replication, recombination and repair] Back     alignment and domain information
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein Back     alignment and domain information
>smart00763 AAA_PrkA PrkA AAA domain Back     alignment and domain information
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D Back     alignment and domain information
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK10762 D-ribose transporter ATP binding protein; Provisional Back     alignment and domain information
>PRK14235 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE Back     alignment and domain information
>PRK12727 flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>cd03299 ABC_ModC_like Archeal protein closely related to ModC Back     alignment and domain information
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK14242 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional Back     alignment and domain information
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed Back     alignment and domain information
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules Back     alignment and domain information
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional Back     alignment and domain information
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional Back     alignment and domain information
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK04296 thymidine kinase; Provisional Back     alignment and domain information
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed Back     alignment and domain information
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE Back     alignment and domain information
>PRK09700 D-allose transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional Back     alignment and domain information
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK15064 ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only] Back     alignment and domain information
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK10762 D-ribose transporter ATP binding protein; Provisional Back     alignment and domain information
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional Back     alignment and domain information
>PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein Back     alignment and domain information
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1 Back     alignment and domain information
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>PRK13633 cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03288 ABCC_SUR2 The SUR domain 2 Back     alignment and domain information
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10261 glutathione transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PLN03073 ABC transporter F family; Provisional Back     alignment and domain information
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit Back     alignment and domain information
>PRK08769 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional Back     alignment and domain information
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed Back     alignment and domain information
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14237 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional Back     alignment and domain information
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14241 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK11147 ABC transporter ATPase component; Reviewed Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK09700 D-allose transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2 Back     alignment and domain information
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional Back     alignment and domain information
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only] Back     alignment and domain information
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK06871 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters Back     alignment and domain information
>KOG2228 consensus Origin recognition complex, subunit 4 [Replication, recombination and repair] Back     alignment and domain information
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein Back     alignment and domain information
>cd03281 ABC_MSH5_euk MutS5 homolog in eukaryotes Back     alignment and domain information
>PRK13695 putative NTPase; Provisional Back     alignment and domain information
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ] Back     alignment and domain information
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] Back     alignment and domain information
>CHL00195 ycf46 Ycf46; Provisional Back     alignment and domain information
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13549 xylose transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein Back     alignment and domain information
>PRK00409 recombination and DNA strand exchange inhibitor protein; Reviewed Back     alignment and domain information
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13549 xylose transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK09183 transposase/IS protein; Provisional Back     alignment and domain information
>PRK08058 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional Back     alignment and domain information
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PLN03211 ABC transporter G-25; Provisional Back     alignment and domain information
>PRK06067 flagellar accessory protein FlaH; Validated Back     alignment and domain information
>PRK06921 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK09361 radB DNA repair and recombination protein RadB; Provisional Back     alignment and domain information
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only] Back     alignment and domain information
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK14240 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein Back     alignment and domain information
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06090 DNA polymerase III subunit delta'; Validated Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query885
3iza_B 1263 Structure Of An Apoptosome-Procaspase-9 Card Comple 7e-05
1z6t_A591 Structure Of The Apoptotic Protease-activating Fact 8e-05
3sfz_A 1249 Crystal Structure Of Full-Length Murine Apaf-1 Leng 2e-04
>pdb|1Z6T|A Chain A, Structure Of The Apoptotic Protease-activating Factor 1 Bound To Adp Length = 591 Back     alignment and structure
>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query885
2a5y_B549 CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis 1e-58
1z6t_A591 APAF-1, apoptotic protease activating factor 1; ca 2e-57
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-48
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 6e-25
4fcg_A328 Uncharacterized protein; structural genomics, PSI- 3e-18
4fcg_A328 Uncharacterized protein; structural genomics, PSI- 2e-14
2z63_A 570 TOLL-like receptor 4, variable lymphocyte recepto; 1e-17
2z63_A 570 TOLL-like receptor 4, variable lymphocyte recepto; 5e-13
2z63_A 570 TOLL-like receptor 4, variable lymphocyte recepto; 9e-13
2z63_A570 TOLL-like receptor 4, variable lymphocyte recepto; 1e-09
2z63_A 570 TOLL-like receptor 4, variable lymphocyte recepto; 2e-08
2z63_A570 TOLL-like receptor 4, variable lymphocyte recepto; 2e-08
2z63_A570 TOLL-like receptor 4, variable lymphocyte recepto; 5e-07
2z63_A570 TOLL-like receptor 4, variable lymphocyte recepto; 1e-06
2z81_A 549 CD282 antigen, TOLL-like receptor 2, variable lymp 7e-17
2z81_A 549 CD282 antigen, TOLL-like receptor 2, variable lymp 3e-09
2z81_A549 CD282 antigen, TOLL-like receptor 2, variable lymp 6e-09
2z81_A549 CD282 antigen, TOLL-like receptor 2, variable lymp 5e-08
2z81_A549 CD282 antigen, TOLL-like receptor 2, variable lymp 9e-07
3jqh_A167 C-type lectin domain family 4 member M; DC-signr, 2e-13
3jqh_A167 C-type lectin domain family 4 member M; DC-signr, 6e-10
3jqh_A167 C-type lectin domain family 4 member M; DC-signr, 5e-08
3jqh_A167 C-type lectin domain family 4 member M; DC-signr, 1e-06
3vq2_A 606 TLR4, TOLL-like receptor 4; leucine rich repeat MD 2e-13
3vq2_A 606 TLR4, TOLL-like receptor 4; leucine rich repeat MD 4e-13
3vq2_A606 TLR4, TOLL-like receptor 4; leucine rich repeat MD 2e-09
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 4e-13
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 7e-13
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 3e-10
4ecn_A 876 Leucine-rich repeat protein; leucine-rich repeats, 5e-10
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 6e-07
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 5e-04
3t6q_A 606 CD180 antigen; protein-protein complex, leucine ri 4e-13
3t6q_A606 CD180 antigen; protein-protein complex, leucine ri 4e-11
3t6q_A 606 CD180 antigen; protein-protein complex, leucine ri 5e-10
3t6q_A606 CD180 antigen; protein-protein complex, leucine ri 6e-08
3fxi_A 605 TLR4, htoll, TOLL-like receptor 4; leucine rich re 5e-13
3fxi_A 605 TLR4, htoll, TOLL-like receptor 4; leucine rich re 2e-11
3fxi_A605 TLR4, htoll, TOLL-like receptor 4; leucine rich re 1e-10
3fxi_A605 TLR4, htoll, TOLL-like receptor 4; leucine rich re 1e-05
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 8e-13
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 5e-10
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 9e-10
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 6e-09
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 2e-08
3j0a_A844 TOLL-like receptor 5; membrane protein, leucine-ri 5e-04
3bz5_A457 Internalin-J, INLJ; leucine rich repeat (LRR), cys 2e-12
3bz5_A457 Internalin-J, INLJ; leucine rich repeat (LRR), cys 1e-08
3bz5_A 457 Internalin-J, INLJ; leucine rich repeat (LRR), cys 8e-07
3bz5_A457 Internalin-J, INLJ; leucine rich repeat (LRR), cys 6e-05
1ziw_A 680 TOLL-like receptor 3; innate immunity, immune syst 2e-12
1ziw_A 680 TOLL-like receptor 3; innate immunity, immune syst 1e-10
1ziw_A680 TOLL-like receptor 3; innate immunity, immune syst 6e-10
1ziw_A 680 TOLL-like receptor 3; innate immunity, immune syst 4e-09
1ziw_A680 TOLL-like receptor 3; innate immunity, immune syst 1e-08
1ziw_A680 TOLL-like receptor 3; innate immunity, immune syst 5e-08
1ziw_A680 TOLL-like receptor 3; innate immunity, immune syst 8e-07
2z80_A353 TOLL-like receptor 2, variable lymphocyte recepto; 5e-12
2z80_A353 TOLL-like receptor 2, variable lymphocyte recepto; 5e-04
4eco_A636 Uncharacterized protein; leucine-rich repeats, pro 8e-12
4eco_A 636 Uncharacterized protein; leucine-rich repeats, pro 6e-10
4eco_A 636 Uncharacterized protein; leucine-rich repeats, pro 2e-08
4eco_A636 Uncharacterized protein; leucine-rich repeats, pro 9e-08
4eco_A636 Uncharacterized protein; leucine-rich repeats, pro 1e-07
4eco_A636 Uncharacterized protein; leucine-rich repeats, pro 2e-06
3oja_A487 Leucine-rich immune molecule 1; coiled-coil, helix 9e-12
3oja_A487 Leucine-rich immune molecule 1; coiled-coil, helix 2e-11
3oja_B 597 Anopheles plasmodium-responsive leucine-rich REPE 1e-11
3oja_B597 Anopheles plasmodium-responsive leucine-rich REPE 2e-08
3oja_B 597 Anopheles plasmodium-responsive leucine-rich REPE 6e-07
3o6n_A390 APL1; leucine-rich repeat, protein binding; HET: N 2e-11
3o6n_A390 APL1; leucine-rich repeat, protein binding; HET: N 6e-10
3o6n_A390 APL1; leucine-rich repeat, protein binding; HET: N 4e-07
2z7x_B 520 TOLL-like receptor 1, variable lymphocyte recepto; 4e-11
2z7x_B 520 TOLL-like receptor 1, variable lymphocyte recepto; 1e-09
2z7x_B520 TOLL-like receptor 1, variable lymphocyte recepto; 1e-09
2z7x_B520 TOLL-like receptor 1, variable lymphocyte recepto; 2e-07
2z7x_B520 TOLL-like receptor 1, variable lymphocyte recepto; 8e-04
2o6q_A270 Variable lymphocyte receptor A; leucine-rich repea 6e-11
3o53_A317 Protein LRIM1, AGAP006348-PA; leucine-rich repeat, 9e-11
3o53_A317 Protein LRIM1, AGAP006348-PA; leucine-rich repeat, 4e-10
4fmz_A347 Internalin; leucine rich repeat, structural genomi 1e-10
4fmz_A347 Internalin; leucine rich repeat, structural genomi 2e-07
4fmz_A347 Internalin; leucine rich repeat, structural genomi 1e-06
3v47_A455 TOLL-like receptor 5B and variable lymphocyte REC 2e-10
3v47_A455 TOLL-like receptor 5B and variable lymphocyte REC 4e-09
3v47_A455 TOLL-like receptor 5B and variable lymphocyte REC 8e-09
1xku_A330 Decorin; proteoglycan, leucine-rich repeat, struct 4e-10
1xku_A330 Decorin; proteoglycan, leucine-rich repeat, struct 4e-09
1xku_A330 Decorin; proteoglycan, leucine-rich repeat, struct 4e-06
2id5_A477 Lingo-1, leucine rich repeat neuronal 6A; CNS-spec 6e-10
2id5_A477 Lingo-1, leucine rich repeat neuronal 6A; CNS-spec 1e-09
2id5_A 477 Lingo-1, leucine rich repeat neuronal 6A; CNS-spec 2e-06
1ozn_A285 Reticulon 4 receptor; NOGO receptor, MAD, myelinat 8e-10
2z62_A276 TOLL-like receptor 4, variable lymphocyte recepto; 9e-10
2z62_A276 TOLL-like receptor 4, variable lymphocyte recepto; 1e-08
2z62_A276 TOLL-like receptor 4, variable lymphocyte recepto; 2e-05
2v9t_B220 SLIT homolog 2 protein N-product; structural prote 1e-09
3g06_A 622 SSPH2 (leucine-rich repeat protein); E3 ubiquitin 1e-09
3g06_A 622 SSPH2 (leucine-rich repeat protein); E3 ubiquitin 4e-09
3g06_A622 SSPH2 (leucine-rich repeat protein); E3 ubiquitin 5e-07
1ogq_A313 PGIP-2, polygalacturonase inhibiting protein; inhi 3e-09
1ogq_A313 PGIP-2, polygalacturonase inhibiting protein; inhi 6e-06
1ogq_A313 PGIP-2, polygalacturonase inhibiting protein; inhi 5e-05
1ogq_A313 PGIP-2, polygalacturonase inhibiting protein; inhi 2e-04
2z66_A306 Variable lymphocyte receptor B, TOLL-like recepto; 3e-09
1m9s_A 605 Internalin B; cell invasion, GW domains, SH3 domai 4e-09
2xot_A361 Amphoterin-induced protein 1; cell adhesion, neuro 5e-09
2xot_A361 Amphoterin-induced protein 1; cell adhesion, neuro 8e-09
3zyj_A440 Leucine-rich repeat-containing protein 4C; cell ad 5e-09
3zyj_A 440 Leucine-rich repeat-containing protein 4C; cell ad 6e-05
3rgz_A768 Protein brassinosteroid insensitive 1; phytohormon 6e-09
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 3e-08
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 5e-08
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 8e-07
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 1e-06
3rgz_A768 Protein brassinosteroid insensitive 1; phytohormon 5e-06
3rgz_A768 Protein brassinosteroid insensitive 1; phytohormon 2e-04
3rgz_A768 Protein brassinosteroid insensitive 1; phytohormon 7e-04
2v70_A220 SLIT-2, SLIT homolog 2 protein N-product; neurogen 7e-09
3m19_A251 Variable lymphocyte receptor A diversity region; a 9e-09
1o6v_A466 Internalin A; bacterial infection, extracellular r 1e-08
1o6v_A 466 Internalin A; bacterial infection, extracellular r 2e-08
1o6v_A466 Internalin A; bacterial infection, extracellular r 8e-08
1o6v_A466 Internalin A; bacterial infection, extracellular r 1e-05
1p9a_G290 Platelet glycoprotein IB alpha chain precursor; pl 1e-08
2ft3_A332 Biglycan; proteoglycan, dimer interface, structura 1e-08
3cvr_A571 Invasion plasmid antigen; leucine rich repeat and 1e-08
3cvr_A 571 Invasion plasmid antigen; leucine rich repeat and 1e-07
3cvr_A 571 Invasion plasmid antigen; leucine rich repeat and 2e-06
3cvr_A571 Invasion plasmid antigen; leucine rich repeat and 7e-05
1jl5_A454 Outer protein YOPM; leucine-rich repeat, molecular 2e-08
1jl5_A454 Outer protein YOPM; leucine-rich repeat, molecular 8e-06
1jl5_A 454 Outer protein YOPM; leucine-rich repeat, molecular 2e-04
1jl5_A454 Outer protein YOPM; leucine-rich repeat, molecular 5e-04
1jl5_A454 Outer protein YOPM; leucine-rich repeat, molecular 7e-04
3a79_B 562 TLR6, VLRB.59, TOLL-like receptor 6, variable lymp 4e-08
3a79_B562 TLR6, VLRB.59, TOLL-like receptor 6, variable lymp 1e-06
3a79_B562 TLR6, VLRB.59, TOLL-like receptor 6, variable lymp 6e-06
4ay9_X350 Follicle-stimulating hormone receptor; hormone-rec 5e-08
3zyi_A452 Leucine-rich repeat-containing protein 4; cell adh 1e-07
3e6j_A229 Variable lymphocyte receptor diversity region; var 2e-07
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 2e-07
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 5e-07
3ogk_B592 Coronatine-insensitive protein 1; leucine rich rep 8e-05
3ogk_B 592 Coronatine-insensitive protein 1; leucine rich rep 1e-04
1w8a_A192 SLIT protein; signaling protein, secreted protein, 5e-07
1h6u_A308 Internalin H; cell adhesion, leucine rich repeat, 8e-07
1h6t_A291 Internalin B; cell adhesion, leucine rich repeat, 1e-06
2o6r_A177 Variable lymphocyte receptor B; leucine-rich repea 1e-06
2o6r_A177 Variable lymphocyte receptor B; leucine-rich repea 1e-04
2p1m_B594 Transport inhibitor response 1 protein; F-BOX, leu 2e-06
2p1m_B594 Transport inhibitor response 1 protein; F-BOX, leu 8e-06
2p1m_B 594 Transport inhibitor response 1 protein; F-BOX, leu 7e-05
3rfs_A272 Internalin B, repeat modules, variable lymphocyte 2e-06
3rfs_A272 Internalin B, repeat modules, variable lymphocyte 3e-04
1dce_A567 Protein (RAB geranylgeranyltransferase alpha subun 3e-06
1dce_A567 Protein (RAB geranylgeranyltransferase alpha subun 2e-05
1dce_A567 Protein (RAB geranylgeranyltransferase alpha subun 5e-05
2wfh_A193 SLIT homolog 2 protein C-product; developmental pr 4e-06
2je0_A149 Acidic leucine-rich nuclear phosphoprotein 32 FAM 6e-06
2xwt_C239 Thyrotropin receptor; signaling protein-immune sys 2e-05
4ezg_A197 Putative uncharacterized protein; internalin-A, le 3e-05
4ezg_A197 Putative uncharacterized protein; internalin-A, le 3e-05
4ezg_A197 Putative uncharacterized protein; internalin-A, le 8e-05
2ifg_A347 High affinity nerve growth factor receptor; TRK, T 9e-05
2ifg_A347 High affinity nerve growth factor receptor; TRK, T 7e-04
2r9u_A174 Variable lymphocyte receptor; adaptive immunity, V 2e-04
1kht_A192 Adenylate kinase; phosphotransferase, signaling pr 4e-04
2ell_A168 Acidic leucine-rich nuclear phosphoprotein 32 FAM 4e-04
1xeu_A263 Internalin C; cellular invasion, leucine-rich repe 9e-04
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A* Length = 549 Back     alignment and structure
 Score =  209 bits (533), Expect = 1e-58
 Identities = 55/477 (11%), Positives = 141/477 (29%), Gaps = 48/477 (10%)

Query: 30  LTDSLNSLREARRDLENITRDVEARVDLAVEQRSRPRHEVNGWLESAQFMLREVDGILQR 89
             D+L  L       E    D    +     +  R  + +  +   A  +   +D     
Sbjct: 23  PRDALTYLEGKNIFTE----DHSELISKMSTRLERIANFLRIYRRQASELGPLIDFFNYN 78

Query: 90  GDEEIQKTCLRKTCFPGTWCSRDKLGKEASEKIVAVEELIGRGHFAVIAERPPRAPVEER 149
               +                         + ++    +  +    ++  +     V ++
Sbjct: 79  NQSHLADF----------LEDYIDFAINEPD-LLRPVVIAPQFSRQMLDRKLLLGNVPKQ 127

Query: 150 P--IGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKK-LNNKFRDTGHDFDL 206
                +   +D +I +    + D +   + L+G  G GK+ +  + L+   +  G ++D 
Sbjct: 128 MTCYIREYHVDRVI-KKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDS 186

Query: 207 VIWVKVSR--DANLEKIQESILRRFEIPDQMWIGKDEDGRANEILSNLR------GKKFV 258
           ++W+K S     +   +   IL   +  D +      +   + +L  +           +
Sbjct: 187 IVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTL 246

Query: 259 LLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEMGARRR-FRVECLSPEA 317
            + DDV +          + +  + +   + + TTR  E+            V  L  + 
Sbjct: 247 FVFDDVVQ---------EETIRWAQELRLRCLVTTRDVEISNAASQTCEFIEVTSLEIDE 297

Query: 318 ALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGE 377
             D               E  ++    +E   G P  L+    +   +    +      +
Sbjct: 298 CYDFLEAYGMPMPVGEKEE--DVLNKTIELSSGNPATLMMFFKSCEPK-TFEKMAQLNNK 354

Query: 378 LQRYPFK-----FAGMGNSVFPILRFSYDSLREDIFKTCFLYCALFPEEHNITKDELIQL 432
           L+                S+   L+   + L ++  ++   +  + P   +I       +
Sbjct: 355 LESRGLVGVECITPYSYKSLAMALQRCVEVLSDED-RSALAFAVVMPPGVDIPVKLWSCV 413

Query: 433 WIGEGFLNGI-SPRDQGEYIIESLKLACLLERGE-NSEDSVKMHNLIRDMALELASE 487
              +   N      D+    ++ L     L  G+     + K+ ++I      +   
Sbjct: 414 IPVDICSNEEEQLDDEVADRLKRLSKRGALLSGKRMPVLTFKIDHIIHMFLKHVVDA 470
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens} Length = 591 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Length = 1249 Back     alignment and structure
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 Back     alignment and structure
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 Back     alignment and structure
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 Back     alignment and structure
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 Back     alignment and structure
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 Back     alignment and structure
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 Back     alignment and structure
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 Back     alignment and structure
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 Back     alignment and structure
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 Back     alignment and structure
>3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 Back     alignment and structure
>3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 Back     alignment and structure
>3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 Back     alignment and structure
>3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 Back     alignment and structure
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 Back     alignment and structure
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 Back     alignment and structure
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 Back     alignment and structure
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 Back     alignment and structure
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 Back     alignment and structure
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 Back     alignment and structure
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 Back     alignment and structure
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 Back     alignment and structure
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 Back     alignment and structure
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 Back     alignment and structure
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 Back     alignment and structure
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 Back     alignment and structure
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 Back     alignment and structure
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 Back     alignment and structure
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 Back     alignment and structure
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 Back     alignment and structure
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 Back     alignment and structure
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 Back     alignment and structure
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 Back     alignment and structure
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 Back     alignment and structure
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 Back     alignment and structure
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 Back     alignment and structure
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 Back     alignment and structure
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 Back     alignment and structure
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 Back     alignment and structure
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 Back     alignment and structure
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 Back     alignment and structure
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 Back     alignment and structure
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 Back     alignment and structure
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 Back     alignment and structure
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 Back     alignment and structure
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 Back     alignment and structure
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 Back     alignment and structure
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 Back     alignment and structure
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 Back     alignment and structure
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 Back     alignment and structure
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 Back     alignment and structure
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 Back     alignment and structure
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 Back     alignment and structure
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 Back     alignment and structure
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 Back     alignment and structure
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 Back     alignment and structure
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 Back     alignment and structure
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 Back     alignment and structure
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 Back     alignment and structure
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 Back     alignment and structure
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 Back     alignment and structure
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 Back     alignment and structure
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 Back     alignment and structure
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 Back     alignment and structure
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 Back     alignment and structure
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 Back     alignment and structure
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 Back     alignment and structure
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 Back     alignment and structure
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 Back     alignment and structure
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 Back     alignment and structure
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 Back     alignment and structure
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 Back     alignment and structure
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 Back     alignment and structure
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 Back     alignment and structure
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 Back     alignment and structure
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 Back     alignment and structure
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 Back     alignment and structure
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 Back     alignment and structure
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 Back     alignment and structure
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 Back     alignment and structure
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 Back     alignment and structure
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 Back     alignment and structure
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 Back     alignment and structure
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 Back     alignment and structure
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 Back     alignment and structure
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 Back     alignment and structure
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 Back     alignment and structure
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 Back     alignment and structure
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 Back     alignment and structure
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 Back     alignment and structure
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 Back     alignment and structure
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A Length = 192 Back     alignment and structure
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 Back     alignment and structure
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query885
2a5y_B549 CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis 100.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 100.0
3sfz_A 1249 APAF-1, apoptotic peptidase activating factor 1; a 100.0
1z6t_A591 APAF-1, apoptotic protease activating factor 1; ca 100.0
4fmz_A347 Internalin; leucine rich repeat, structural genomi 99.93
3v47_A455 TOLL-like receptor 5B and variable lymphocyte REC 99.91
4fmz_A347 Internalin; leucine rich repeat, structural genomi 99.91
3o6n_A390 APL1; leucine-rich repeat, protein binding; HET: N 99.91
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 99.91
4eco_A636 Uncharacterized protein; leucine-rich repeats, pro 99.9
1o6v_A466 Internalin A; bacterial infection, extracellular r 99.9
2id5_A477 Lingo-1, leucine rich repeat neuronal 6A; CNS-spec 99.9
2z63_A570 TOLL-like receptor 4, variable lymphocyte recepto; 99.9
3vq2_A 606 TLR4, TOLL-like receptor 4; leucine rich repeat MD 99.9
1o6v_A466 Internalin A; bacterial infection, extracellular r 99.9
3oja_B 597 Anopheles plasmodium-responsive leucine-rich REPE 99.89
2z81_A549 CD282 antigen, TOLL-like receptor 2, variable lymp 99.89
3o6n_A390 APL1; leucine-rich repeat, protein binding; HET: N 99.89
2id5_A 477 Lingo-1, leucine rich repeat neuronal 6A; CNS-spec 99.88
2z7x_B520 TOLL-like receptor 1, variable lymphocyte recepto; 99.88
3vq2_A 606 TLR4, TOLL-like receptor 4; leucine rich repeat MD 99.88
3t6q_A 606 CD180 antigen; protein-protein complex, leucine ri 99.88
3bz5_A457 Internalin-J, INLJ; leucine rich repeat (LRR), cys 99.88
3oja_B 597 Anopheles plasmodium-responsive leucine-rich REPE 99.88
3a79_B 562 TLR6, VLRB.59, TOLL-like receptor 6, variable lymp 99.88
3t6q_A 606 CD180 antigen; protein-protein complex, leucine ri 99.87
2ft3_A332 Biglycan; proteoglycan, dimer interface, structura 99.87
4eco_A636 Uncharacterized protein; leucine-rich repeats, pro 99.87
4fcg_A328 Uncharacterized protein; structural genomics, PSI- 99.87
3bz5_A457 Internalin-J, INLJ; leucine rich repeat (LRR), cys 99.87
4ecn_A876 Leucine-rich repeat protein; leucine-rich repeats, 99.86
3v47_A455 TOLL-like receptor 5B and variable lymphocyte REC 99.86
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 99.86
1xku_A330 Decorin; proteoglycan, leucine-rich repeat, struct 99.86
2z63_A 570 TOLL-like receptor 4, variable lymphocyte recepto; 99.86
1ziw_A 680 TOLL-like receptor 3; innate immunity, immune syst 99.86
4fcg_A328 Uncharacterized protein; structural genomics, PSI- 99.86
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 99.85
2z7x_B 520 TOLL-like receptor 1, variable lymphocyte recepto; 99.85
4g8a_A 635 TOLL-like receptor 4; leucine rich repeat MD-2 rel 99.84
3rgz_A 768 Protein brassinosteroid insensitive 1; phytohormon 99.84
2z81_A549 CD282 antigen, TOLL-like receptor 2, variable lymp 99.84
1ogq_A313 PGIP-2, polygalacturonase inhibiting protein; inhi 99.84
2ft3_A332 Biglycan; proteoglycan, dimer interface, structura 99.83
1ziw_A 680 TOLL-like receptor 3; innate immunity, immune syst 99.83
3j0a_A 844 TOLL-like receptor 5; membrane protein, leucine-ri 99.83
1xku_A330 Decorin; proteoglycan, leucine-rich repeat, struct 99.83
3a79_B 562 TLR6, VLRB.59, TOLL-like receptor 6, variable lymp 99.83
3g06_A 622 SSPH2 (leucine-rich repeat protein); E3 ubiquitin 99.81
2z80_A353 TOLL-like receptor 2, variable lymphocyte recepto; 99.81
3o53_A317 Protein LRIM1, AGAP006348-PA; leucine-rich repeat, 99.8
2z66_A306 Variable lymphocyte receptor B, TOLL-like recepto; 99.79
3zyj_A440 Leucine-rich repeat-containing protein 4C; cell ad 99.78
3zyj_A440 Leucine-rich repeat-containing protein 4C; cell ad 99.78
1jl5_A454 Outer protein YOPM; leucine-rich repeat, molecular 99.78
3zyi_A452 Leucine-rich repeat-containing protein 4; cell adh 99.78
3zyi_A452 Leucine-rich repeat-containing protein 4; cell adh 99.78
3g06_A 622 SSPH2 (leucine-rich repeat protein); E3 ubiquitin 99.78
1jl5_A454 Outer protein YOPM; leucine-rich repeat, molecular 99.78
4g8a_A635 TOLL-like receptor 4; leucine rich repeat MD-2 rel 99.78
2z80_A353 TOLL-like receptor 2, variable lymphocyte recepto; 99.77
1ogq_A313 PGIP-2, polygalacturonase inhibiting protein; inhi 99.76
1ozn_A285 Reticulon 4 receptor; NOGO receptor, MAD, myelinat 99.74
3o53_A317 Protein LRIM1, AGAP006348-PA; leucine-rich repeat, 99.74
2z66_A306 Variable lymphocyte receptor B, TOLL-like recepto; 99.74
3oja_A 487 Leucine-rich immune molecule 1; coiled-coil, helix 99.74
1wwl_A312 Monocyte differentiation antigen CD14; LPS, immune 99.73
1h6u_A308 Internalin H; cell adhesion, leucine rich repeat, 99.7
3oja_A 487 Leucine-rich immune molecule 1; coiled-coil, helix 99.7
1ozn_A285 Reticulon 4 receptor; NOGO receptor, MAD, myelinat 99.69
1wwl_A312 Monocyte differentiation antigen CD14; LPS, immune 99.69
2z62_A276 TOLL-like receptor 4, variable lymphocyte recepto; 99.68
2xwt_C239 Thyrotropin receptor; signaling protein-immune sys 99.68
3rfs_A272 Internalin B, repeat modules, variable lymphocyte 99.67
1p9a_G290 Platelet glycoprotein IB alpha chain precursor; pl 99.66
1z7x_W461 Ribonuclease inhibitor; leucine-rich repeat, enzym 99.65
1h6u_A308 Internalin H; cell adhesion, leucine rich repeat, 99.65
2o6q_A270 Variable lymphocyte receptor A; leucine-rich repea 99.65
4ay9_X350 Follicle-stimulating hormone receptor; hormone-rec 99.65
1z7x_W461 Ribonuclease inhibitor; leucine-rich repeat, enzym 99.64
2qen_A350 Walker-type ATPase; unknown function; HET: ADP; 2. 99.64
2o6q_A270 Variable lymphocyte receptor A; leucine-rich repea 99.64
3ogk_B592 Coronatine-insensitive protein 1; leucine rich rep 99.64
1w5s_A412 Origin recognition complex subunit 2 ORC2; replica 99.64
3ogk_B592 Coronatine-insensitive protein 1; leucine rich rep 99.62
2xwt_C239 Thyrotropin receptor; signaling protein-immune sys 99.62
3rfs_A272 Internalin B, repeat modules, variable lymphocyte 99.62
2z62_A276 TOLL-like receptor 4, variable lymphocyte recepto; 99.62
1p9a_G290 Platelet glycoprotein IB alpha chain precursor; pl 99.61
2fna_A357 Conserved hypothetical protein; structural genomic 99.61
1h6t_A291 Internalin B; cell adhesion, leucine rich repeat, 99.61
2p1m_B594 Transport inhibitor response 1 protein; F-BOX, leu 99.58
4glp_A310 Monocyte differentiation antigen CD14; alpha beta 99.58
4ay9_X350 Follicle-stimulating hormone receptor; hormone-rec 99.58
1m9s_A 605 Internalin B; cell invasion, GW domains, SH3 domai 99.58
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 99.57
2ast_B336 S-phase kinase-associated protein 2; SCF-substrate 99.56
2ca6_A386 RAN GTPase-activating protein 1; GAP, GTPase activ 99.55
1h6t_A291 Internalin B; cell adhesion, leucine rich repeat, 99.53
2ca6_A386 RAN GTPase-activating protein 1; GAP, GTPase activ 99.52
3goz_A362 Leucine-rich repeat-containing protein; LEGL7, NES 99.52
1m9s_A 605 Internalin B; cell invasion, GW domains, SH3 domai 99.52
3goz_A362 Leucine-rich repeat-containing protein; LEGL7, NES 99.5
4glp_A310 Monocyte differentiation antigen CD14; alpha beta 99.5
3m19_A251 Variable lymphocyte receptor A diversity region; a 99.48
3cvr_A 571 Invasion plasmid antigen; leucine rich repeat and 99.47
4ezg_A197 Putative uncharacterized protein; internalin-A, le 99.46
3e6j_A229 Variable lymphocyte receptor diversity region; var 99.46
1xeu_A263 Internalin C; cellular invasion, leucine-rich repe 99.46
2p1m_B594 Transport inhibitor response 1 protein; F-BOX, leu 99.46
3m19_A251 Variable lymphocyte receptor A diversity region; a 99.45
3cvr_A 571 Invasion plasmid antigen; leucine rich repeat and 99.41
2v9t_B220 SLIT homolog 2 protein N-product; structural prote 99.4
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 99.4
4ezg_A197 Putative uncharacterized protein; internalin-A, le 99.4
1xeu_A263 Internalin C; cellular invasion, leucine-rich repe 99.4
2v9t_B220 SLIT homolog 2 protein N-product; structural prote 99.39
2o6s_A208 Variable lymphocyte receptor B; leucine-rich repea 99.39
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 99.38
2v1u_A387 Cell division control protein 6 homolog; DNA repli 99.38
1dce_A567 Protein (RAB geranylgeranyltransferase alpha subun 99.38
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 99.38
3qfl_A115 MLA10; coiled-coil, (CC) domain, NLRS, nucleotide- 99.38
2o6s_A208 Variable lymphocyte receptor B; leucine-rich repea 99.37
2v70_A220 SLIT-2, SLIT homolog 2 protein N-product; neurogen 99.36
2je0_A149 Acidic leucine-rich nuclear phosphoprotein 32 FAM 99.35
3e6j_A229 Variable lymphocyte receptor diversity region; var 99.35
2v70_A220 SLIT-2, SLIT homolog 2 protein N-product; neurogen 99.34
2ell_A168 Acidic leucine-rich nuclear phosphoprotein 32 FAM 99.34
1a9n_A176 U2A', U2A'; complex (nuclear protein/RNA), RNA, sn 99.34
2xot_A361 Amphoterin-induced protein 1; cell adhesion, neuro 99.31
1a9n_A176 U2A', U2A'; complex (nuclear protein/RNA), RNA, sn 99.28
2ell_A168 Acidic leucine-rich nuclear phosphoprotein 32 FAM 99.28
4b8c_D 727 Glucose-repressible alcohol dehydrogenase transcr 99.27
2xot_A361 Amphoterin-induced protein 1; cell adhesion, neuro 99.27
2je0_A149 Acidic leucine-rich nuclear phosphoprotein 32 FAM 99.27
4b8c_D 727 Glucose-repressible alcohol dehydrogenase transcr 99.24
2o6r_A177 Variable lymphocyte receptor B; leucine-rich repea 99.23
1w8a_A192 SLIT protein; signaling protein, secreted protein, 99.22
2wfh_A193 SLIT homolog 2 protein C-product; developmental pr 99.21
1dce_A567 Protein (RAB geranylgeranyltransferase alpha subun 99.19
2wfh_A193 SLIT homolog 2 protein C-product; developmental pr 99.17
1w8a_A192 SLIT protein; signaling protein, secreted protein, 99.15
1njg_A250 DNA polymerase III subunit gamma; rossman-like fol 99.15
1ds9_A198 Outer arm dynein; leucine-rich repeat, beta-BETA-a 99.11
2chg_A226 Replication factor C small subunit; DNA-binding pr 99.1
3sb4_A329 Hypothetical leucine rich repeat protein; LRR, rig 99.06
3g39_A170 Variable lymphocyte receptor VLRB.2D; antibody, X- 99.05
3sb4_A329 Hypothetical leucine rich repeat protein; LRR, rig 99.05
2r9u_A174 Variable lymphocyte receptor; adaptive immunity, V 99.04
1ds9_A198 Outer arm dynein; leucine-rich repeat, beta-BETA-a 98.98
2o6r_A177 Variable lymphocyte receptor B; leucine-rich repea 98.97
2r9u_A174 Variable lymphocyte receptor; adaptive immunity, V 98.96
1sxj_B323 Activator 1 37 kDa subunit; clamp loader, processi 98.91
3g39_A170 Variable lymphocyte receptor VLRB.2D; antibody, X- 98.88
4fdw_A401 Leucine rich hypothetical protein; putative cell s 98.86
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 98.82
1hqc_A324 RUVB; extended AAA-ATPase domain, complex with nuc 98.77
1iqp_A327 RFCS; clamp loader, extended AAA-ATPase domain, co 98.76
4fdw_A401 Leucine rich hypothetical protein; putative cell s 98.7
2ifg_A347 High affinity nerve growth factor receptor; TRK, T 98.66
2chq_A319 Replication factor C small subunit; DNA-binding pr 98.54
1sxj_A516 Activator 1 95 kDa subunit; clamp loader, processi 98.53
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 98.51
3bos_A242 Putative DNA replication factor; P-loop containing 98.51
4fs7_A394 Uncharacterized protein; leucine-rich repeats, pro 98.51
1jr3_A373 DNA polymerase III subunit gamma; processivity, pr 98.48
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 98.48
2ifg_A347 High affinity nerve growth factor receptor; TRK, T 98.47
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 98.43
1sxj_E354 Activator 1 40 kDa subunit; clamp loader, processi 98.37
3un9_A372 NLR family member X1; leucine rich repeat (LRR), a 98.37
3un9_A372 NLR family member X1; leucine rich repeat (LRR), a 98.35
4fs7_A394 Uncharacterized protein; leucine-rich repeats, pro 98.32
3pvs_A447 Replication-associated recombination protein A; ma 98.31
3e4g_A176 ATP synthase subunit S, mitochondrial; leucine-ric 98.27
1sxj_D353 Activator 1 41 kDa subunit; clamp loader, processi 98.27
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 98.17
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 98.16
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 98.15
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 98.14
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 98.13
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 98.12
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 98.09
4gt6_A394 Cell surface protein; leucine rich repeats, putati 98.09
3u61_B324 DNA polymerase accessory protein 44; AAA+, ATP hyd 98.08
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 98.07
2ra8_A362 Uncharacterized protein Q64V53_bacfr; WGR domain, 98.04
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 98.03
3pfi_A338 Holliday junction ATP-dependent DNA helicase RUVB; 98.02
2qp9_X355 Vacuolar protein sorting-associated protein 4; ATP 98.02
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 98.02
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 98.02
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 98.0
3rw6_A267 Nuclear RNA export factor 1; retroviral constituti 97.99
3vfd_A389 Spastin; ATPase, microtubule severing, hydrolase; 97.97
3e4g_A176 ATP synthase subunit S, mitochondrial; leucine-ric 97.96
2zan_A444 Vacuolar protein sorting-associating protein 4B; S 97.92
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 97.9
4gt6_A394 Cell surface protein; leucine rich repeats, putati 97.85
1a5t_A334 Delta prime, HOLB; zinc finger, DNA replication; 2 97.82
4b4t_J405 26S protease regulatory subunit 8 homolog; hydrola 97.82
2ra8_A362 Uncharacterized protein Q64V53_bacfr; WGR domain, 97.79
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 97.78
3pxg_A468 Negative regulator of genetic competence CLPC/MEC; 97.78
2kjq_A149 DNAA-related protein; solution structure, NESG, st 97.76
4h09_A379 Hypothetical leucine rich repeat protein; two LRR_ 97.76
4b4t_L437 26S protease subunit RPT4; hydrolase, AAA-atpases, 97.74
2r62_A268 Cell division protease FTSH homolog; ATPase domain 97.73
4b4t_H467 26S protease regulatory subunit 7 homolog; hydrola 97.73
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 97.73
2pze_A229 Cystic fibrosis transmembrane conductance regulat; 97.71
1vpl_A256 ABC transporter, ATP-binding protein; TM0544, stru 97.71
3hu3_A489 Transitional endoplasmic reticulum ATPase; VCP, tr 97.7
2cbz_A237 Multidrug resistance-associated protein 1; ABC pro 97.68
1sgw_A214 Putative ABC transporter; structural genomics, P p 97.68
1io0_A185 Tropomodulin; LRR protein, right-handed super-heli 97.65
1qvr_A854 CLPB protein; coiled coil, AAA ATPase, chaperone; 97.65
1io0_A185 Tropomodulin; LRR protein, right-handed super-heli 97.65
2olj_A263 Amino acid ABC transporter; ABC domain, ATPase, hy 97.64
3rw6_A267 Nuclear RNA export factor 1; retroviral constituti 97.64
4b4t_I437 26S protease regulatory subunit 4 homolog; hydrola 97.63
2gno_A305 DNA polymerase III, gamma subunit-related protein; 97.63
2zu0_C267 Probable ATP-dependent transporter SUFC; iron-sulf 97.61
1mv5_A243 LMRA, multidrug resistance ABC transporter ATP-bin 97.61
2nq2_C253 Hypothetical ABC transporter ATP-binding protein H 97.61
3tui_C366 Methionine import ATP-binding protein METN; ABC-tr 97.6
3gfo_A275 Cobalt import ATP-binding protein CBIO 1; structur 97.6
3tif_A235 Uncharacterized ABC transporter ATP-binding prote; 97.59
4b4t_M434 26S protease regulatory subunit 6A; hydrolase, AAA 97.59
2yz2_A266 Putative ABC transporter ATP-binding protein TM_0; 97.58
2pcj_A224 ABC transporter, lipoprotein-releasing system ATP- 97.58
1b0u_A262 Histidine permease; ABC transporter, transport pro 97.55
4b4t_K428 26S protease regulatory subunit 6B homolog; hydrol 97.55
3pxi_A758 Negative regulator of genetic competence CLPC/MEC; 97.55
4g1u_C266 Hemin import ATP-binding protein HMUV; membrane tr 97.53
1ji0_A240 ABC transporter; ATP binding protein, structural g 97.52
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 97.52
2d2e_A250 SUFC protein; ABC-ATPase, SUF protein, 310-helix, 97.51
2ff7_A247 Alpha-hemolysin translocation ATP-binding protein 97.47
2bbs_A290 Cystic fibrosis transmembrane conductance regulato 97.46
2ce7_A476 Cell division protein FTSH; metalloprotease; HET: 97.46
3fvq_A359 Fe(3+) IONS import ATP-binding protein FBPC; nucle 97.46
3rlf_A381 Maltose/maltodextrin import ATP-binding protein M; 97.45
1z47_A355 CYSA, putative ABC-transporter ATP-binding protein 97.45
2ixe_A271 Antigen peptide transporter 1; ABC ATPase, hydrola 97.44
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 97.43
2pjz_A263 Hypothetical protein ST1066; ATP binding protein, 97.43
1v43_A372 Sugar-binding transport ATP-binding protein; ATPas 97.42
3co5_A143 Putative two-component system transcriptional RES 97.42
2it1_A362 362AA long hypothetical maltose/maltodextrin trans 97.41
2qi9_C249 Vitamin B12 import ATP-binding protein BTUD; inner 97.41
2onk_A240 Molybdate/tungstate ABC transporter, ATP-binding p 97.41
1g6h_A257 High-affinity branched-chain amino acid transport 97.36
2ghi_A260 Transport protein; multidrug resistance protein, M 97.35
3j16_B608 RLI1P; ribosome recycling, translation, eukarya, r 97.35
2yyz_A359 Sugar ABC transporter, ATP-binding protein; sugar 97.35
3nh6_A306 ATP-binding cassette SUB-family B member 6, mitoc; 97.33
3d31_A348 Sulfate/molybdate ABC transporter, ATP-binding pro 97.33
1oxx_K353 GLCV, glucose, ABC transporter, ATP binding protei 97.31
3ozx_A538 RNAse L inhibitor; ATP binding cassette protein, h 97.26
1g29_1372 MALK, maltose transport protein MALK; ATPase, acti 97.23
1ye8_A178 Protein THEP1, hypothetical UPF0334 kinase-like pr 97.23
1in4_A334 RUVB, holliday junction DNA helicase RUVB; AAA+-cl 97.2
4gp7_A171 Metallophosphoesterase; polynucleotide kinase phos 97.17
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 97.16
2ihy_A279 ABC transporter, ATP-binding protein; ATPase, ABC 97.16
2c9o_A456 RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- 97.15
4fcw_A311 Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 97.13
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 97.12
1ojl_A304 Transcriptional regulatory protein ZRAR; response 97.11
2ehv_A251 Hypothetical protein PH0186; KAIC, RECA ATPase, un 97.07
3cf2_A806 TER ATPase, transitional endoplasmic reticulum ATP 97.04
3bk7_A607 ABC transporter ATP-binding protein; ABC ATPase, i 97.02
1yqt_A538 RNAse L inhibitor; ATP-binding cassette, ribosome 97.02
3m6a_A543 ATP-dependent protease LA 1; alpha, beta, ATP-bind 96.99
3bk7_A607 ABC transporter ATP-binding protein; ABC ATPase, i 96.98
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 96.97
2cvh_A220 DNA repair and recombination protein RADB; filamen 96.93
1yqt_A538 RNAse L inhibitor; ATP-binding cassette, ribosome 96.91
3ozx_A538 RNAse L inhibitor; ATP binding cassette protein, h 96.91
3hr8_A356 Protein RECA; alpha and beta proteins (A/B, A+B), 96.9
3j16_B608 RLI1P; ribosome recycling, translation, eukarya, r 96.9
3gd7_A390 Fusion complex of cystic fibrosis transmembrane co 96.88
2w0m_A235 SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus 96.86
3b5x_A582 Lipid A export ATP-binding/permease protein MSBA; 96.86
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 96.83
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 96.83
2qgz_A308 Helicase loader, putative primosome component; str 96.75
3n70_A145 Transport activator; sigma-54, ntpase, PSI, MCSG, 96.74
2iw3_A986 Elongation factor 3A; acetylation, ATP-binding, pr 96.72
2r44_A331 Uncharacterized protein; putative ATPase, structur 96.72
4a74_A231 DNA repair and recombination protein RADA; hydrola 96.65
2dhr_A499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 96.65
3qf4_A587 ABC transporter, ATP-binding protein; multidrug tr 96.65
2yl4_A595 ATP-binding cassette SUB-family B member 10, mitoc 96.62
4a82_A578 Cystic fibrosis transmembrane conductance regulat; 96.62
1n0w_A243 DNA repair protein RAD51 homolog 1; DNA repair, ho 96.6
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 96.59
3pxi_A758 Negative regulator of genetic competence CLPC/MEC; 96.59
2vhj_A331 Ntpase P4, P4; non- hydrolysable ATP analogue, hyd 96.55
3b60_A582 Lipid A export ATP-binding/permease protein MSBA; 96.54
1v5w_A343 DMC1, meiotic recombination protein DMC1/LIM15 hom 96.39
4h09_A379 Hypothetical leucine rich repeat protein; two LRR_ 96.38
2b8t_A223 Thymidine kinase; deoxyribonucleoside kinase, zinc 96.31
2zr9_A349 Protein RECA, recombinase A; recombination, RECA m 96.29
2z43_A324 DNA repair and recombination protein RADA; archaea 96.28
3jvv_A356 Twitching mobility protein; hexameric P-loop ATPas 96.23
2eyu_A261 Twitching motility protein PILT; pilus retraction 96.23
2iw3_A986 Elongation factor 3A; acetylation, ATP-binding, pr 96.22
3ux8_A670 Excinuclease ABC, A subunit; UVRA, nucleotide exci 96.2
1rz3_A201 Hypothetical protein rbstp0775; MCSG, structural g 96.19
3io5_A333 Recombination and repair protein; storage dimer, i 96.16
3qf4_B598 Uncharacterized ABC transporter ATP-binding prote 96.07
1u94_A356 RECA protein, recombinase A; homologous recombinat 96.01
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 96.0
4aby_A415 DNA repair protein RECN; hydrolase, double strand 95.97
2px0_A296 Flagellar biosynthesis protein FLHF; SRP GTPase, f 95.96
1xp8_A366 RECA protein, recombinase A; recombination, radior 95.92
1vma_A306 Cell division protein FTSY; TM0570, structural gen 95.91
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 95.9
3e70_C328 DPA, signal recognition particle receptor; FTSY, S 95.9
4f4c_A 1321 Multidrug resistance protein PGP-1; ABC transporte 95.76
1pzn_A349 RAD51, DNA repair and recombination protein RAD51, 95.72
3thx_A934 DNA mismatch repair protein MSH2; ABC family ATPas 95.67
1zp6_A191 Hypothetical protein ATU3015; alpha-beta protein., 95.65
2i1q_A322 DNA repair and recombination protein RADA; ATPase, 95.59
3dm5_A443 SRP54, signal recognition 54 kDa protein; protein- 95.59
3kl4_A433 SRP54, signal recognition 54 kDa protein; signal r 95.58
1jr3_D343 DNA polymerase III, delta subunit; processivity, p 95.55
3lda_A400 DNA repair protein RAD51; DNA binding protein, ATP 95.55
2pt7_A330 CAG-ALFA; ATPase, protein-protein complex, type IV 95.52
3g5u_A1284 MCG1178, multidrug resistance protein 1A; P-glycop 95.46
1qvr_A854 CLPB protein; coiled coil, AAA ATPase, chaperone; 95.46
2o8b_B1022 DNA mismatch repair protein MSH6; DNA damage respo 95.39
1kgd_A180 CASK, peripheral plasma membrane CASK; maguk, guan 95.39
3ice_A422 Transcription termination factor RHO; transcriptio 95.36
3tr0_A205 Guanylate kinase, GMP kinase; purines, pyrimidines 95.35
1qhx_A178 CPT, protein (chloramphenicol phosphotransferase); 95.33
3rfe_A130 Platelet glycoprotein IB beta chain; platelet surf 95.32
3uie_A200 Adenylyl-sulfate kinase 1, chloroplastic; rossmann 95.32
3vaa_A199 Shikimate kinase, SK; structural genomics, center 95.3
3g5u_A 1284 MCG1178, multidrug resistance protein 1A; P-glycop 95.27
4eun_A200 Thermoresistant glucokinase; putative sugar kinase 95.25
3rfe_A130 Platelet glycoprotein IB beta chain; platelet surf 95.23
1ewq_A765 DNA mismatch repair protein MUTS; multiple domains 95.23
4f4c_A1321 Multidrug resistance protein PGP-1; ABC transporte 95.21
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 95.19
2yhs_A503 FTSY, cell division protein FTSY; cell cycle, prot 95.17
3ux8_A670 Excinuclease ABC, A subunit; UVRA, nucleotide exci 95.16
3tau_A208 Guanylate kinase, GMP kinase; structural genomics, 95.14
1kag_A173 SKI, shikimate kinase I; transferase, structural g 95.13
2dr3_A247 UPF0273 protein PH0284; RECA superfamily ATPase, h 95.12
2vf7_A842 UVRA2, excinuclease ABC, subunit A.; DNA-binding p 95.12
1htw_A158 HI0065; nucleotide-binding fold, structural genomi 95.07
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 95.04
1cr0_A296 DNA primase/helicase; RECA-type protein fold, tran 95.03
3bh0_A315 DNAB-like replicative helicase; ATPase, replicatio 95.03
1knq_A175 Gluconate kinase; ALFA/beta structure, transferase 95.03
3lw7_A179 Adenylate kinase related protein (ADKA-like); AMP, 95.0
1znw_A207 Guanylate kinase, GMP kinase; ATP:GMP-phosphotrans 94.98
2ffh_A425 Protein (FFH); SRP54, signal recognition particle, 94.98
2j41_A207 Guanylate kinase; GMP, GMK, transferase, ATP-bindi 94.93
2orw_A184 Thymidine kinase; TMTK, TP4A, transferase; HET: 4T 94.91
2ck3_D482 ATP synthase subunit beta\, mitochondrial; hydrola 94.91
2yvu_A186 Probable adenylyl-sulfate kinase; transferase, str 94.91
3a00_A186 Guanylate kinase, GMP kinase; domain movement, dim 94.9
1j8m_F297 SRP54, signal recognition 54 kDa protein; signalin 94.87
1lvg_A198 Guanylate kinase, GMP kinase; transferase; HET: AD 94.83
1ly1_A181 Polynucleotide kinase; PNK, phosphatase, transfera 94.81
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 94.78
3trf_A185 Shikimate kinase, SK; amino acid biosynthesis, tra 94.76
2hf9_A226 Probable hydrogenase nickel incorporation protein 94.74
1g5t_A196 COB(I)alamin adenosyltransferase; P-loop protein, 94.74
2ewv_A372 Twitching motility protein PILT; pilus retraction 94.73
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 94.72
3thx_B918 DNA mismatch repair protein MSH3; ABC family ATPas 94.72
2rhm_A193 Putative kinase; P-loop containing nucleoside trip 94.71
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 94.69
1z6g_A218 Guanylate kinase; structural genomics, SGC, struct 94.69
2qor_A204 Guanylate kinase; phosphotransferase, purine metab 94.68
2r6a_A454 DNAB helicase, replicative helicase; replication, 94.68
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 94.67
3t61_A202 Gluconokinase; PSI-biology, structural genomics, p 94.66
2bdt_A189 BH3686; alpha-beta protein, structural genomics, P 94.64
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 94.64
1s96_A219 Guanylate kinase, GMP kinase; E.coli, dimer, SAD, 94.63
3pih_A916 Uvrabc system protein A; hydrolase, ABC ATPase, DN 94.62
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 94.6
1kht_A192 Adenylate kinase; phosphotransferase, signaling pr 94.6
1tf7_A525 KAIC; homohexamer, hexamer, circadian clock protei 94.6
1y63_A184 LMAJ004144AAA protein; structural genomics, protei 94.59
3ney_A197 55 kDa erythrocyte membrane protein; structural ge 94.55
3iij_A180 Coilin-interacting nuclear ATPase protein; alpha a 94.52
1wb9_A800 DNA mismatch repair protein MUTS; DNA-binding, ATP 94.48
2wsm_A221 Hydrogenase expression/formation protein (HYPB); m 94.45
1cke_A227 CK, MSSA, protein (cytidine monophosphate kinase); 94.44
1nks_A194 Adenylate kinase; thermophilic, transferase; HET: 94.44
2xxa_A433 Signal recognition particle protein; protein trans 94.44
3cm0_A186 Adenylate kinase; ATP-binding, cytoplasm, nucleoti 94.42
3cf2_A806 TER ATPase, transitional endoplasmic reticulum ATP 94.4
2c95_A196 Adenylate kinase 1; transferase, AP4A, nucleotide 94.38
2bbw_A246 Adenylate kinase 4, AK4; nucleotide kinase, nucleo 94.36
3umf_A217 Adenylate kinase; rossmann fold, transferase; 2.05 94.36
2ze6_A253 Isopentenyl transferase; crown GALL tumor, cytokin 94.35
1tev_A196 UMP-CMP kinase; ploop, NMP binding region, LID reg 94.35
1rj9_A304 FTSY, signal recognition protein; SRP-GTPase domai 94.35
4e22_A252 Cytidylate kinase; P-loop, CMP/ATP binding, transf 94.34
1via_A175 Shikimate kinase; structural genomics, transferase 94.34
1zuh_A168 Shikimate kinase; alpha-beta protein, transferase; 94.33
1sky_E473 F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alp 94.32
3tlx_A243 Adenylate kinase 2; structural genomics, structura 94.32
2if2_A204 Dephospho-COA kinase; alpha-beta protein, structur 94.25
3hws_A363 ATP-dependent CLP protease ATP-binding subunit CL; 94.23
1jjv_A206 Dephospho-COA kinase; P-loop nucleotide-binding fo 94.22
2iyv_A184 Shikimate kinase, SK; transferase, aromatic amino 94.18
1uf9_A203 TT1252 protein; P-loop, nucleotide binding domain, 94.18
2plr_A213 DTMP kinase, probable thymidylate kinase; TMP-bind 94.16
2jaq_A205 Deoxyguanosine kinase; transferase, deoxyribonucle 94.16
1ukz_A203 Uridylate kinase; transferase; HET: ADP AMP; 1.90A 94.14
1gvn_B287 Zeta; postsegregational killing system, plasmid; 1 94.13
3b9q_A302 Chloroplast SRP receptor homolog, alpha subunit CP 94.11
1ex7_A186 Guanylate kinase; substrate-induced FIT, domain mo 94.1
1g8p_A350 Magnesium-chelatase 38 kDa subunit; parallel beta 94.09
2j37_W504 Signal recognition particle 54 kDa protein (SRP54) 94.06
2bwj_A199 Adenylate kinase 5; phosphoryl transfer reaction, 94.03
2i3b_A189 HCR-ntpase, human cancer-related ntpase; AAA, ross 94.01
3nbx_X500 ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu 94.0
1um8_A376 ATP-dependent CLP protease ATP-binding subunit CL; 94.0
3b85_A208 Phosphate starvation-inducible protein; PHOH2, ATP 93.99
2vli_A183 Antibiotic resistance protein; transferase, tunica 93.99
2cdn_A201 Adenylate kinase; phosphoryl transfer, associative 93.97
3a4m_A260 L-seryl-tRNA(SEC) kinase; P-loop motif, walker A m 93.95
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 93.91
1e6c_A173 Shikimate kinase; phosphoryl transfer, ADP, shikim 93.91
3lnc_A231 Guanylate kinase, GMP kinase; ALS collaborative cr 93.89
2pez_A179 Bifunctional 3'-phosphoadenosine 5'- phosphosulfat 93.89
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 93.86
2grj_A192 Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosp 93.83
2wwf_A212 Thymidilate kinase, putative; transferase, malaria 93.82
1aky_A220 Adenylate kinase; ATP:AMP phosphotransferase, myok 93.74
1nn5_A215 Similar to deoxythymidylate kinase (thymidylate K; 93.74
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 93.71
4a1f_A338 DNAB helicase, replicative DNA helicase; hydrolase 93.71
2pt5_A168 Shikimate kinase, SK; aromatic amino acid biosynth 93.71
1qf9_A194 UMP/CMP kinase, protein (uridylmonophosphate/cytid 93.71
2v54_A204 DTMP kinase, thymidylate kinase; nucleotide biosyn 93.68
2p5t_B253 PEZT; postsegregational killing system, phosphoryl 93.66
1fx0_B498 ATP synthase beta chain; latent ATPase, thermal st 93.63
2r6f_A972 Excinuclease ABC subunit A; UVRA, nucleotide excis 93.62
1xjc_A169 MOBB protein homolog; structural genomics, midwest 93.61
2pbr_A195 DTMP kinase, thymidylate kinase; transferase, nucl 93.6
2r2a_A199 Uncharacterized protein; zonular occludens toxin, 93.59
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 93.58
1m7g_A211 Adenylylsulfate kinase; APS kinase, transferase, s 93.56
2og2_A359 Putative signal recognition particle receptor; nuc 93.54
1zd8_A227 GTP:AMP phosphotransferase mitochondrial; ATP:AMP 93.53
2v9p_A305 Replication protein E1; AAA+ molecular motor, DNA 93.46
1g41_A444 Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dep 93.43
3nwj_A250 ATSK2; P loop, shikimate, nucleoside monophosphate 93.43
3fb4_A216 Adenylate kinase; psychrophIle, phosphotransferase 93.39
1tue_A212 Replication protein E1; helicase, replication, E1E 93.36
2ygr_A993 Uvrabc system protein A; hydrolase, nucleotide exc 93.36
3cmu_A2050 Protein RECA, recombinase A; homologous recombinat 93.32
1zak_A222 Adenylate kinase; ATP:AMP-phosphotransferase, tran 93.32
1vht_A218 Dephospho-COA kinase; structural genomics, transfe 93.25
3dl0_A216 Adenylate kinase; phosphotransferase, zinc coordin 93.22
2z0h_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 93.18
2f6r_A281 COA synthase, bifunctional coenzyme A synthase; 18 92.98
3r20_A233 Cytidylate kinase; structural genomics, seattle st 92.96
3sr0_A206 Adenylate kinase; phosphoryl transfer analogue, AL 92.92
2f1r_A171 Molybdopterin-guanine dinucleotide biosynthesis pr 92.87
3l0o_A427 Transcription termination factor RHO; helicase, RH 92.84
3fwy_A314 Light-independent protochlorophyllide reductase I 92.82
2v3c_C432 SRP54, signal recognition 54 kDa protein; nucleoti 92.75
1gtv_A214 TMK, thymidylate kinase; transferase, transferase 92.73
3ake_A208 Cytidylate kinase; CMP kinase, CMP complex, open c 92.66
4eaq_A229 DTMP kinase, thymidylate kinase; structural genomi 92.63
2vp4_A230 Deoxynucleoside kinase; ATP-binding, DNA synthesis 92.6
3be4_A217 Adenylate kinase; malaria, cryptosporidium parvum 92.56
1ak2_A233 Adenylate kinase isoenzyme-2; nucleoside monophosp 92.5
3d3q_A340 TRNA delta(2)-isopentenylpyrophosphate transferase 92.41
2q6t_A444 DNAB replication FORK helicase; hydrolase; 2.90A { 92.37
1np6_A174 Molybdopterin-guanine dinucleotide biosynthesis pr 92.36
2xb4_A223 Adenylate kinase; ATP-binding, nucleotide-binding, 92.34
1e4v_A214 Adenylate kinase; transferase(phosphotransferase); 92.2
3lv8_A236 DTMP kinase, thymidylate kinase; structural genomi 92.19
3a8t_A339 Adenylate isopentenyltransferase; rossmann fold pr 92.17
3exa_A322 TRNA delta(2)-isopentenylpyrophosphate transferase 92.14
1tq4_A413 IIGP1, interferon-inducible GTPase; interferon gam 92.13
1q3t_A236 Cytidylate kinase; nucleotide monophosphate kinase 92.12
3k1j_A604 LON protease, ATP-dependent protease LON; ATP-bind 92.1
3p32_A355 Probable GTPase RV1496/MT1543; structural genomics 92.07
3cmu_A 2050 Protein RECA, recombinase A; homologous recombinat 92.07
1svm_A377 Large T antigen; AAA+ fold, viral protein; HET: AT 91.99
3crm_A323 TRNA delta(2)-isopentenylpyrophosphate transferase 91.96
4tmk_A213 Protein (thymidylate kinase); ATP:DTMP phosphotran 91.93
3cmw_A 1706 Protein RECA, recombinase A; homologous recombinat 91.92
1nlf_A279 Regulatory protein REPA; replicative DNA helicase 91.91
1oix_A191 RAS-related protein RAB-11A; small G protein, intr 91.87
>2a5y_B CED-4; apoptosis; HET: ATP; 2.60A {Caenorhabditis elegans} SCOP: a.4.5.80 a.77.1.3 c.37.1.20 PDB: 3lqq_A* 3lqr_A* Back     alignment and structure
Probab=100.00  E-value=2.5e-46  Score=431.94  Aligned_cols=308  Identities=16%  Similarity=0.177  Sum_probs=247.0

Q ss_pred             cchhHHHHHHHHHhhcC---CCeEEEEEcCCCCcHHHHHHHHHh--hhccCCCCccEEEEEEEcCcc--cHHHHHHHHHH
Q 045686          155 VGLDSIISEVWRCIEDH---NEKVIGLYGMGGVGKTTLLKKLNN--KFRDTGHDFDLVIWVKVSRDA--NLEKIQESILR  227 (885)
Q Consensus       155 vgr~~~~~~l~~~L~~~---~~~vi~I~G~gG~GKTtLa~~v~~--~~~~~~~~f~~~~wv~v~~~~--~~~~~~~~i~~  227 (885)
                      |||++++++|.++|...   ..++|+|+||||+||||||+++|+  +.+. ..+|++++||++++.+  +...++..|+.
T Consensus       131 ~GR~~~~~~l~~~L~~~~~~~~~vv~I~G~gGvGKTtLA~~v~~~~~~~~-~~~F~~~~wv~vs~~~~~~~~~~~~~il~  209 (549)
T 2a5y_B          131 YIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLI-GINYDSIVWLKDSGTAPKSTFDLFTDILL  209 (549)
T ss_dssp             CCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTB-TTTBSEEEEEECCCCSTTHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHhcccCCCceEEEEEcCCCCCHHHHHHHHHHhhhHHH-hccCCcEEEEEECCCCCCCHHHHHHHHHH
Confidence            59999999999999543   679999999999999999999998  3444 4889999999999875  89999999999


Q ss_pred             HcCCCcc-----ccCCCChhHHHHHHHHHhcCC-CeEEEEecCCCccccccccccccccccCCCCCEEEEEcCChhHHhh
Q 045686          228 RFEIPDQ-----MWIGKDEDGRANEILSNLRGK-KFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGE  301 (885)
Q Consensus       228 ~l~~~~~-----~~~~~~~~~~~~~l~~~l~~k-~~LlVLDdv~~~~~~~~~~~~~~l~~~~~~gs~IivTTR~~~v~~~  301 (885)
                      +++....     .....+.+.+...+++.++++ ||||||||||+...+ .    ++    ..+||+||||||++.|+..
T Consensus       210 ~l~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~kr~LlVLDdv~~~~~~-~----~~----~~~gs~ilvTTR~~~v~~~  280 (549)
T 2a5y_B          210 MLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETI-R----WA----QELRLRCLVTTRDVEISNA  280 (549)
T ss_dssp             HHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHH-H----HH----HHTTCEEEEEESBGGGGGG
T ss_pred             HHhcCcccccccccccccHHHHHHHHHHHHcCCCcEEEEEECCCCchhh-c----cc----ccCCCEEEEEcCCHHHHHH
Confidence            9986531     112234556788999999996 999999999986544 1    11    2269999999999999987


Q ss_pred             hc-ccceeeccCCChHHHHHHHHHHhcCcccCCccchHHHHHHHHHHhCCchhHHHHHHHHHhcCCChhhHHHHHHHHhc
Q 045686          302 MG-ARRRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGELQR  380 (885)
Q Consensus       302 ~~-~~~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai~~~~~~l~~~~~~~~w~~~~~~l~~  380 (885)
                      +. ....|+|++|++++||+||.+.++...  .++++++++++|+++|+|+||||+++|+.|+.+    .|+.+ +.+..
T Consensus       281 ~~~~~~~~~l~~L~~~ea~~Lf~~~a~~~~--~~~~~~~~~~~I~~~c~GlPLAl~~~g~~l~~~----~w~~~-~~l~~  353 (549)
T 2a5y_B          281 ASQTCEFIEVTSLEIDECYDFLEAYGMPMP--VGEKEEDVLNKTIELSSGNPATLMMFFKSCEPK----TFEKM-AQLNN  353 (549)
T ss_dssp             CCSCEEEEECCCCCHHHHHHHHHHTSCCCC----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSS----SHHHH-HHHHH
T ss_pred             cCCCCeEEECCCCCHHHHHHHHHHHhcCCC--CchhHHHHHHHHHHHhCCChHHHHHHHHHhccc----hHHHH-HHhHH
Confidence            75 446799999999999999999987653  246788899999999999999999999999764    35443 34433


Q ss_pred             CcccccCCCCcccccccccccccccchhhhHHh-----------hhccCCCCceecHHHHHHHHHhc--CcCCCC----C
Q 045686          381 YPFKFAGMGNSVFPILRFSYDSLREDIFKTCFL-----------YCALFPEEHNITKDELIQLWIGE--GFLNGI----S  443 (885)
Q Consensus       381 ~~~~~~~~~~~~~~~l~~sy~~L~~~~~k~cfl-----------~~s~fp~~~~i~~~~li~~w~a~--g~~~~~----~  443 (885)
                      ..+...  ...+..++.+||++||++ +|.||+           |||+||+++.|+    +++|+|+  ||+...    .
T Consensus       354 ~l~~~~--~~~i~~~l~~Sy~~L~~~-lk~~f~~Ls~~er~l~~~ls~fp~~~~i~----i~~w~a~~~G~i~~~~~~~~  426 (549)
T 2a5y_B          354 KLESRG--LVGVECITPYSYKSLAMA-LQRCVEVLSDEDRSALAFAVVMPPGVDIP----VKLWSCVIPVDICSNEEEQL  426 (549)
T ss_dssp             HHHHHC--SSTTCCCSSSSSSSHHHH-HHHHHHTSCHHHHHHTTGGGSSCTTCCEE----HHHHHHHSCC-------CCC
T ss_pred             Hhhccc--HHHHHHHHhcccccccHH-HHHHHhccchhhhhHhhheeeeCCCCeee----eeeeeeeccceeccCCCCCC
Confidence            322211  247999999999999996 999999           999999999999    8999999  999754    2


Q ss_pred             CCChHHHHHHHHHHhcccccCCC-CCCcEEEehhHHHHHHHHhhc
Q 045686          444 PRDQGEYIIESLKLACLLERGEN-SEDSVKMHNLIRDMALELASE  487 (885)
Q Consensus       444 ~~~~~~~~l~~L~~~~ll~~~~~-~~~~~~mHdlv~~~a~~~~~~  487 (885)
                      .++.++ ++++|+++||++.... ...+|+|||+||++|++++.+
T Consensus       427 ~~~~~~-~l~~L~~rsLl~~~~~~~~~~~~mHdlv~~~a~~~~~~  470 (549)
T 2a5y_B          427 DDEVAD-RLKRLSKRGALLSGKRMPVLTFKIDHIIHMFLKHVVDA  470 (549)
T ss_dssp             THHHHH-HHHHTTTBSSCSEEECSSSCEEECCHHHHHHHHTTSCT
T ss_pred             HHHHHH-HHHHHHHcCCeeEecCCCceEEEeChHHHHHHHHHHHH
Confidence            444555 9999999999997642 356899999999999988865
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Back     alignment and structure
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* Back     alignment and structure
>1z6t_A APAF-1, apoptotic protease activating factor 1; caspase activation, ADP, nucleotide binding, CARD, apoptosis; HET: ADP; 2.21A {Homo sapiens} Back     alignment and structure
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Back     alignment and structure
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Back     alignment and structure
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Back     alignment and structure
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Back     alignment and structure
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Back     alignment and structure
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Back     alignment and structure
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Back     alignment and structure
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Back     alignment and structure
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Back     alignment and structure
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Back     alignment and structure
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Back     alignment and structure
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Back     alignment and structure
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Back     alignment and structure
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Back     alignment and structure
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Back     alignment and structure
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Back     alignment and structure
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Back     alignment and structure
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Back     alignment and structure
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Back     alignment and structure
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Back     alignment and structure
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Back     alignment and structure
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Back     alignment and structure
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Back     alignment and structure
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Back     alignment and structure
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* Back     alignment and structure
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Back     alignment and structure
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Back     alignment and structure
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Back     alignment and structure
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Back     alignment and structure
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Back     alignment and structure
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Back     alignment and structure
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Back     alignment and structure
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Back     alignment and structure
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Back     alignment and structure
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Back     alignment and structure
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Back     alignment and structure
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Back     alignment and structure
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Back     alignment and structure
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Back     alignment and structure
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Back     alignment and structure
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Back     alignment and structure
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Back     alignment and structure
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* Back     alignment and structure
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Back     alignment and structure
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Back     alignment and structure
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Back     alignment and structure
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Back     alignment and structure
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Back     alignment and structure
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Back     alignment and structure
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Back     alignment and structure
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Back     alignment and structure
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Back     alignment and structure
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Back     alignment and structure
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Back     alignment and structure
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Back     alignment and structure
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Back     alignment and structure
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Back     alignment and structure
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Back     alignment and structure
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Back     alignment and structure
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Back     alignment and structure
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Back     alignment and structure
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Back     alignment and structure
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} Back     alignment and structure
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Back     alignment and structure
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* Back     alignment and structure
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Back     alignment and structure
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Back     alignment and structure
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Back     alignment and structure
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Back     alignment and structure
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Back     alignment and structure
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Back     alignment and structure
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} Back     alignment and structure
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Back     alignment and structure
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Back     alignment and structure
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Back     alignment and structure
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Back     alignment and structure
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Back     alignment and structure
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Back     alignment and structure
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Back     alignment and structure
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Back     alignment and structure
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Back     alignment and structure
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} Back     alignment and structure
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Back     alignment and structure
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Back     alignment and structure
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Back     alignment and structure
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Back     alignment and structure
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Back     alignment and structure
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Back     alignment and structure
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Back     alignment and structure
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Back     alignment and structure
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Back     alignment and structure
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Back     alignment and structure
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>3qfl_A MLA10; coiled-coil, (CC) domain, NLRS, nucleotide-binding domain, L rich repeat containing receptors, protein binding; 2.00A {Hordeum vulgare} Back     alignment and structure
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Back     alignment and structure
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Back     alignment and structure
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Back     alignment and structure
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Back     alignment and structure
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Back     alignment and structure
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Back     alignment and structure
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Back     alignment and structure
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Back     alignment and structure
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Back     alignment and structure
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Back     alignment and structure
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} Back     alignment and structure
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Back     alignment and structure
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Back     alignment and structure
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} Back     alignment and structure
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Back     alignment and structure
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Back     alignment and structure
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Back     alignment and structure
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Back     alignment and structure
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Back     alignment and structure
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Back     alignment and structure
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* Back     alignment and structure
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Back     alignment and structure
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Back     alignment and structure
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Back     alignment and structure
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Back     alignment and structure
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Back     alignment and structure
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Back     alignment and structure
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Back     alignment and structure
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* Back     alignment and structure
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A Back     alignment and structure
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Back     alignment and structure
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A Back     alignment and structure
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} Back     alignment and structure
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Back     alignment and structure
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Back     alignment and structure
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} Back     alignment and structure
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} Back     alignment and structure
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A Back     alignment and structure
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Back     alignment and structure
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} Back     alignment and structure
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A Back     alignment and structure
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} Back     alignment and structure
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A Back     alignment and structure
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} Back     alignment and structure
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* Back     alignment and structure
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A Back     alignment and structure
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* Back     alignment and structure
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens} Back     alignment and structure
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12 Back     alignment and structure
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Back     alignment and structure
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J* Back     alignment and structure
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A Back     alignment and structure
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A Back     alignment and structure
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12 Back     alignment and structure
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae} Back     alignment and structure
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C Back     alignment and structure
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124} Back     alignment and structure
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A* Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima} Back     alignment and structure
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A Back     alignment and structure
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12 Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis} Back     alignment and structure
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12 Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Back     alignment and structure
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A* Back     alignment and structure
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A* Back     alignment and structure
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A* Back     alignment and structure
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* Back     alignment and structure
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae} Back     alignment and structure
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A Back     alignment and structure
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A* Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii} Back     alignment and structure
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A* Back     alignment and structure
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} Back     alignment and structure
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii} Back     alignment and structure
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C Back     alignment and structure
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12 Back     alignment and structure
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A* Back     alignment and structure
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str} Back     alignment and structure
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae} Back     alignment and structure
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima} Back     alignment and structure
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A* Back     alignment and structure
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12 Back     alignment and structure
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A* Back     alignment and structure
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus} Back     alignment and structure
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A Back     alignment and structure
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11 Back     alignment and structure
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* Back     alignment and structure
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A* Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus} Back     alignment and structure
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* Back     alignment and structure
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium} Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B* Back     alignment and structure
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} Back     alignment and structure
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A Back     alignment and structure
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B* Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Back     alignment and structure
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A* Back     alignment and structure
>1yqt_A RNAse L inhibitor; ATP-binding cassette, ribosome biogenesis, hydrolyase/translation complex; HET: ADP; 1.90A {Pyrococcus furiosus} Back     alignment and structure
>3ozx_A RNAse L inhibitor; ATP binding cassette protein, hydrolase, translation; HET: ADP; 2.05A {Sulfolobus solfataricus} Back     alignment and structure
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima} Back     alignment and structure
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae} Back     alignment and structure
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens} Back     alignment and structure
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2} Back     alignment and structure
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae} Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} Back     alignment and structure
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A* Back     alignment and structure
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Back     alignment and structure
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima} Back     alignment and structure
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A Back     alignment and structure
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A* Back     alignment and structure
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A Back     alignment and structure
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A Back     alignment and structure
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} Back     alignment and structure
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A* Back     alignment and structure
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ... Back     alignment and structure
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A* Back     alignment and structure
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A* Back     alignment and structure
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus} Back     alignment and structure
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A Back     alignment and structure
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus} Back     alignment and structure
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 Back     alignment and structure
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4} Back     alignment and structure
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima} Back     alignment and structure
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Back     alignment and structure
>4aby_A DNA repair protein RECN; hydrolase, double strand break repair, ATPase, nucleotide binding domain; HET: DNA; 3.00A {Deinococcus radiodurans} Back     alignment and structure
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A* Back     alignment and structure
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1 Back     alignment and structure
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10 Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B* Back     alignment and structure
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans} Back     alignment and structure
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11 Back     alignment and structure
>3thx_A DNA mismatch repair protein MSH2; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 2o8c_A* 2o8d_A* 2o8f_A* 3thw_A* 2o8b_A* 3thy_A* 3thz_A* 2o8e_A* Back     alignment and structure
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25 Back     alignment and structure
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A* Back     alignment and structure
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} Back     alignment and structure
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A Back     alignment and structure
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A* Back     alignment and structure
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A* Back     alignment and structure
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A Back     alignment and structure
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>2o8b_B DNA mismatch repair protein MSH6; DNA damage response, somatic hypermutat protein-DNA complex, DNA mispair, cancer; HET: DNA ADP; 2.75A {Homo sapiens} PDB: 2o8c_B* 2o8d_B* 2o8e_B* 2o8f_B* Back     alignment and structure
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A Back     alignment and structure
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii} Back     alignment and structure
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A* Back     alignment and structure
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* Back     alignment and structure
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A* Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A* Back     alignment and structure
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP} Back     alignment and structure
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* Back     alignment and structure
>1ewq_A DNA mismatch repair protein MUTS; multiple domains of protein, mostly mixed alpha-beta structures, one domain is entirely helical; HET: DNA; 2.20A {Thermus aquaticus} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1nne_A* 1fw6_A* 1ewr_A* Back     alignment and structure
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans} Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* Back     alignment and structure
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A Back     alignment and structure
>3ux8_A Excinuclease ABC, A subunit; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, DN binding protein; HET: ADP; 2.10A {Geobacillus} Back     alignment and structure
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes} Back     alignment and structure
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 Back     alignment and structure
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii} Back     alignment and structure
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A* Back     alignment and structure
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Back     alignment and structure
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A* Back     alignment and structure
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1} Back     alignment and structure
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* Back     alignment and structure
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A Back     alignment and structure
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A Back     alignment and structure
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A Back     alignment and structure
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus} Back     alignment and structure
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* Back     alignment and structure
>2ck3_D ATP synthase subunit beta\, mitochondrial; hydrolase; HET: ANP ADP; 1.9A {Bos taurus} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1cow_D* 1bmf_D* 1e1q_D* 1e1r_D* 1efr_D* 1e79_D* 1h8h_D* 1ohh_D* 1qo1_D 1w0j_D* 1w0k_D* 1h8e_D* 2jdi_D* 2jiz_D* 2jj1_D* 2jj2_D* 2v7q_D* 2wss_D* 2w6j_D 2w6e_D ... Back     alignment and structure
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix} Back     alignment and structure
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F Back     alignment and structure
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1 Back     alignment and structure
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} Back     alignment and structure
>2hf9_A Probable hydrogenase nickel incorporation protein HYPB; alpha and beta protein; HET: GSP; 1.90A {Methanocaldococcus jannaschii} PDB: 2hf8_A* Back     alignment and structure
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* Back     alignment and structure
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A* Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure
>3thx_B DNA mismatch repair protein MSH3; ABC family ATPase, mismatch recognition, mismatched unpaired DNA binding protein-DNA complex; HET: DNA ADP; 2.70A {Homo sapiens} PDB: 3thw_B* 3thy_B* 3thz_B* Back     alignment and structure
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus} Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Back     alignment and structure
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum} Back     alignment and structure
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} Back     alignment and structure
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Back     alignment and structure
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} Back     alignment and structure
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25 Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A* Back     alignment and structure
>3pih_A Uvrabc system protein A; hydrolase, ABC ATPase, DNA repair, nucleotide excision repai hydrolase-DNA complex; HET: DNA; 2.90A {Thermotoga maritima} Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Back     alignment and structure
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A Back     alignment and structure
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A* Back     alignment and structure
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1 Back     alignment and structure
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0 Back     alignment and structure
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A Back     alignment and structure
>1wb9_A DNA mismatch repair protein MUTS; DNA-binding, ATP-binding, DNA binding, DNA repair, mismatch recognition; HET: DNA ADP; 2.10A {Escherichia coli} SCOP: a.113.1.1 c.37.1.12 c.55.6.1 d.75.2.1 PDB: 1wbb_A* 1e3m_A* 1oh5_A* 1oh6_A* 1oh7_A* 1oh8_A* 1w7a_A* 2wtu_A* 1wbd_A* 1ng9_A* 3k0s_A* Back     alignment and structure
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus} Back     alignment and structure
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* Back     alignment and structure
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1 Back     alignment and structure
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9 Back     alignment and structure
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus} Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A Back     alignment and structure
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A Back     alignment and structure
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni} Back     alignment and structure
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A Back     alignment and structure
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D* Back     alignment and structure
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} Back     alignment and structure
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 Back     alignment and structure
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* Back     alignment and structure
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 SUBC F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 Back     alignment and structure
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum} Back     alignment and structure
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} Back     alignment and structure
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A Back     alignment and structure
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 Back     alignment and structure
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A* Back     alignment and structure
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 Back     alignment and structure
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii} Back     alignment and structure
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* Back     alignment and structure
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* Back     alignment and structure
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B* Back     alignment and structure
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana} Back     alignment and structure
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A Back     alignment and structure
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Back     alignment and structure
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A Back     alignment and structure
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} Back     alignment and structure
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11 Back     alignment and structure
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} Back     alignment and structure
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 Back     alignment and structure
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans} Back     alignment and structure
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A Back     alignment and structure
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A* Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Back     alignment and structure
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A* Back     alignment and structure
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum} Back     alignment and structure
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A* Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Back     alignment and structure
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima} Back     alignment and structure
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A* Back     alignment and structure
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A* Back     alignment and structure
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A* Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori} Back     alignment and structure
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A* Back     alignment and structure
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A* Back     alignment and structure
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae} Back     alignment and structure
>1fx0_B ATP synthase beta chain; latent ATPase, thermal stability, potential tentoxin binding hydrolase; 3.20A {Spinacia oleracea} SCOP: a.69.1.1 b.49.1.1 c.37.1.11 PDB: 1kmh_B* Back     alignment and structure
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A Back     alignment and structure
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10 Back     alignment and structure
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} Back     alignment and structure
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58} Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Back     alignment and structure
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A* Back     alignment and structure
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana} Back     alignment and structure
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A* Back     alignment and structure
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A* Back     alignment and structure
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E* Back     alignment and structure
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana} Back     alignment and structure
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus} Back     alignment and structure
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20 Back     alignment and structure
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} Back     alignment and structure
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1 Back     alignment and structure
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A Back     alignment and structure
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A* Back     alignment and structure
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus} Back     alignment and structure
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* Back     alignment and structure
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A* Back     alignment and structure
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus} Back     alignment and structure
>3l0o_A Transcription termination factor RHO; helicase, RHO factor, RNA capture mechanism, ATP-binding, hydrolase, nucleotide-binding, RN binding; 2.35A {Thermotoga maritima} Back     alignment and structure
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} Back     alignment and structure
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B Back     alignment and structure
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A* Back     alignment and structure
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* Back     alignment and structure
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A Back     alignment and structure
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A* Back     alignment and structure
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II} Back     alignment and structure
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A* Back     alignment and structure
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228} Back     alignment and structure
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus} Back     alignment and structure
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A Back     alignment and structure
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A* Back     alignment and structure
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A* Back     alignment and structure
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A* Back     alignment and structure
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} Back     alignment and structure
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A Back     alignment and structure
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A* Back     alignment and structure
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1 Back     alignment and structure
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus} Back     alignment and structure
>3p32_A Probable GTPase RV1496/MT1543; structural genomics, seattle structural genomics center for infectious disease, ssgcid, MEAB, MMAA; HET: GDP PGE; 1.90A {Mycobacterium tuberculosis} PDB: 3md0_A* 4gt1_A* 3nxs_A* 3tk1_A* Back     alignment and structure
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli} Back     alignment and structure
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A Back     alignment and structure
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A Back     alignment and structure
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A* Back     alignment and structure
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A* Back     alignment and structure
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A Back     alignment and structure
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 885
d2a5yb3277 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenor 7e-35
d1xkua_305 c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 4e-06
d1khta_190 c.37.1.1 (A:) Adenylate kinase {Archaeon Methanoco 7e-06
d1jl5a_353 c.10.2.6 (A:) Leucine rich effector protein YopM { 2e-05
d1jl5a_353 c.10.2.6 (A:) Leucine rich effector protein YopM { 1e-04
d1jl5a_353 c.10.2.6 (A:) Leucine rich effector protein YopM { 4e-04
d1jl5a_353 c.10.2.6 (A:) Leucine rich effector protein YopM { 0.004
d1ogqa_313 c.10.2.8 (A:) Polygalacturonase inhibiting protein 9e-05
d1z7xw1 460 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( 1e-04
d1z7xw1460 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( 0.002
d1nksa_194 c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobu 3e-04
d2astb2284 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 5e-04
d2astb2284 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 5e-04
d1rz3a_198 c.37.1.6 (A:) Hypothetical protein rbstp0775 {Baci 7e-04
d2omza2384 c.10.2.1 (A:33-416) Internalin A {Listeria monocyt 8e-04
d2ca6a1344 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom 0.001
d2ca6a1344 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom 0.004
d1dcea3124 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase 0.002
d1p9ag_266 c.10.2.7 (G:) von Willebrand factor binding domain 0.002
d1a9na_162 c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom 0.002
d2ocpa1241 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human ( 0.003
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Length = 277 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: CED-4, NB-ARC domain
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  132 bits (332), Expect = 7e-35
 Identities = 38/278 (13%), Positives = 88/278 (31%), Gaps = 30/278 (10%)

Query: 145 PVEERPIGKTVGLDSIISEVWRCIEDHNEKVIGLYGMGGVGKTTLLKK-LNNKFRDTGHD 203
           P +     +   +D +I ++   + D +   + L+G  G GK+ +  + L+   +  G +
Sbjct: 17  PKQMTCYIREYHVDRVIKKL-DEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGIN 75

Query: 204 FDLVIWVKVSRDANLEKIQESILRRFEIPDQMWIGK--------DEDGRANEILSNLRGK 255
           +D ++W+K S  A              +  +  +              +     + +   
Sbjct: 76  YDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRP 135

Query: 256 KFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVCGEM-GARRRFRVECLS 314
             + + DDV +          + +  + +   + + TTR  E+            V  L 
Sbjct: 136 NTLFVFDDVVQE---------ETIRWAQELRLRCLVTTRDVEISNAASQTCEFIEVTSLE 186

Query: 315 PEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYA 374
            +   D               +  ++    +E   G P  L+    +   +    +    
Sbjct: 187 IDECYDFLEAYGMPMP--VGEKEEDVLNKTIELSSGNPATLMMFFKSCEPKT-FEKMAQL 243

Query: 375 VGELQRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCF 412
             +L+            V  I  +SY SL   + + C 
Sbjct: 244 NNKLESRGL------VGVECITPYSYKSLAMAL-QRCV 274
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Length = 190 Back     information, alignment and structure
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 Back     information, alignment and structure
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 Back     information, alignment and structure
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 Back     information, alignment and structure
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 Back     information, alignment and structure
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 Back     information, alignment and structure
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 Back     information, alignment and structure
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 194 Back     information, alignment and structure
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 Back     information, alignment and structure
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Length = 198 Back     information, alignment and structure
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 Back     information, alignment and structure
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 Back     information, alignment and structure
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 Back     information, alignment and structure
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 Back     information, alignment and structure
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 Back     information, alignment and structure
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 Back     information, alignment and structure
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 241 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query885
d2a5yb3277 CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI 100.0
d2omza2384 Internalin A {Listeria monocytogenes [TaxId: 1639] 99.81
d2omza2384 Internalin A {Listeria monocytogenes [TaxId: 1639] 99.79
d1ogqa_313 Polygalacturonase inhibiting protein PGIP {Kidney 99.72
d1xkua_305 Decorin {Cow (Bos taurus) [TaxId: 9913]} 99.71
d1xkua_305 Decorin {Cow (Bos taurus) [TaxId: 9913]} 99.71
d1ogqa_313 Polygalacturonase inhibiting protein PGIP {Kidney 99.66
d1h6ua2227 Internalin H {Listeria monocytogenes [TaxId: 1639] 99.61
d1p9ag_266 von Willebrand factor binding domain of glycoprote 99.59
d1p9ag_266 von Willebrand factor binding domain of glycoprote 99.59
d1h6ua2227 Internalin H {Listeria monocytogenes [TaxId: 1639] 99.56
d1h6ta2210 Internalin B {Listeria monocytogenes [TaxId: 1639] 99.55
d2omxa2199 Internalin B {Listeria monocytogenes [TaxId: 1639] 99.55
d1ozna_284 Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma 99.54
d1jl5a_353 Leucine rich effector protein YopM {Yersinia pesti 99.54
d1ozna_284 Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma 99.52
d2astb2284 Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa 99.48
d1xwdc1242 Follicle-stimulating hormone receptor {Human (Homo 99.45
d1h6ta2210 Internalin B {Listeria monocytogenes [TaxId: 1639] 99.44
d2omxa2199 Internalin B {Listeria monocytogenes [TaxId: 1639] 99.44
d1dcea3124 Rab geranylgeranyltransferase alpha-subunit, C-ter 99.39
d1jl5a_353 Leucine rich effector protein YopM {Yersinia pesti 99.37
d1xwdc1242 Follicle-stimulating hormone receptor {Human (Homo 99.36
d1a9na_162 Splicesomal U2A' protein {Human (Homo sapiens) [Ta 99.31
d2astb2284 Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa 99.31
d1dcea3124 Rab geranylgeranyltransferase alpha-subunit, C-ter 99.3
d1a9na_162 Splicesomal U2A' protein {Human (Homo sapiens) [Ta 99.25
d1w8aa_192 Slit {Fruit fly (Drosophila melanogaster) [TaxId: 99.17
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 99.15
d1w8aa_192 Slit {Fruit fly (Drosophila melanogaster) [TaxId: 99.14
d1m9la_198 Outer arm dynein light chain 1 {Green algae (Chlam 99.0
d1m9la_198 Outer arm dynein light chain 1 {Green algae (Chlam 98.96
d1z7xw1460 Ribonuclease inhibitor {Human (Homo sapiens) [TaxI 98.83
d2ifga3156 High affinity nerve growth factor receptor, N-term 98.78
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 98.75
d2ifga3156 High affinity nerve growth factor receptor, N-term 98.68
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 98.63
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 98.62
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 98.58
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 98.58
d1z7xw1460 Ribonuclease inhibitor {Human (Homo sapiens) [TaxI 98.57
d2ca6a1344 Rna1p (RanGAP1), N-terminal domain {Fission yeast 98.57
d1r6bx2268 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 98.51
d2ca6a1344 Rna1p (RanGAP1), N-terminal domain {Fission yeast 98.5
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 98.42
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 98.39
d1jbka_195 ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} 98.37
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 98.36
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 98.31
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 98.16
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 98.11
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 98.11
d1qvra2387 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 98.1
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 98.07
d1v43a3239 Hypothetical protein PH0022, N-terminal domain {Py 98.02
d1l2ta_230 MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 98.02
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 98.01
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 97.99
d2awna2232 Maltose transport protein MalK, N-terminal domain 97.99
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 97.93
d1g2912240 Maltose transport protein MalK, N-terminal domain 97.91
d3dhwc1240 Methionine import ATP-binding protein MetN {Escher 97.88
d1koha1162 mRNA export factor tap {Human (Homo sapiens) [TaxI 97.87
d1b0ua_258 ATP-binding subunit of the histidine permease {Sal 97.83
d1oxxk2242 Glucose transport protein GlcV, N-terminal domain 97.83
d2onka1240 Molybdate/tungstate import ATP-binding protein Wtp 97.83
d3d31a2229 Sulfate/molybdate ABC transporter, ATP-binding pro 97.77
d1vpla_238 Putative ABC transporter TM0544 {Thermotoga mariti 97.75
d1koha1162 mRNA export factor tap {Human (Homo sapiens) [TaxI 97.69
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 97.68
d1mv5a_242 Multidrug resistance ABC transporter LmrA, C-termi 97.67
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 97.59
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 97.57
d1g6ha_254 MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 97.56
d1ji0a_240 Branched chain aminoacid ABC transporter {Thermoto 97.53
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 97.52
d2hyda1255 Putative multidrug export ATP-binding/permease pro 97.44
d1r0wa_281 Cystic fibrosis transmembrane conductance regulato 97.42
d1sgwa_200 Putative ABC transporter PF0895 {Pyrococcus furios 97.38
d1l7vc_231 ABC transporter involved in vitamin B12 uptake, Bt 97.25
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 97.03
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 96.91
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 96.72
d2qy9a2211 GTPase domain of the signal recognition particle r 96.68
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 96.66
d1mo6a1269 RecA protein, ATPase-domain {Mycobacterium tubercu 96.4
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 96.39
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 96.39
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 96.35
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 96.34
d1xp8a1268 RecA protein, ATPase-domain {Deinococcus radiodura 96.3
d1u94a1263 RecA protein, ATPase-domain {Escherichia coli [Tax 96.29
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 96.26
d1okkd2207 GTPase domain of the signal recognition particle r 96.19
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 96.16
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 96.16
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 96.11
d1pgva_167 Tropomodulin C-terminal domain {nematode (Caenorha 96.03
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 96.02
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 96.01
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 96.0
d1pgva_167 Tropomodulin C-terminal domain {nematode (Caenorha 96.0
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 95.98
d1ukza_196 Uridylate kinase {Baker's yeast (Saccharomyces cer 95.98
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 95.98
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 95.93
d1ls1a2207 GTPase domain of the signal sequence recognition p 95.9
d1vmaa2213 GTPase domain of the signal recognition particle r 95.89
d1wb9a2234 DNA repair protein MutS, the C-terminal domain {Es 95.86
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 95.84
d1j8yf2211 GTPase domain of the signal sequence recognition p 95.81
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 95.77
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 95.74
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 95.71
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 95.68
d1io0a_166 Tropomodulin C-terminal domain {Chicken (Gallus ga 95.65
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 95.6
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 95.57
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 95.48
d2jdid3276 Central domain of beta subunit of F1 ATP synthase 95.46
d1teva_194 UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606] 95.44
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 95.43
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 95.39
d1ckea_225 CMP kinase {Escherichia coli [TaxId: 562]} 95.32
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 95.3
d1tf7a2242 Circadian clock protein KaiC {Synechococcus sp. st 95.29
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 95.02
d3adka_194 Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} 94.99
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 94.92
d1q3ta_223 CMP kinase {Streptococcus pneumoniae [TaxId: 1313] 94.78
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 94.77
d2p67a1327 LAO/AO transport system kinase ArgK {Escherichia c 94.77
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 94.77
d1ewqa2224 DNA repair protein MutS, the C-terminal domain {Th 94.66
d2ak3a1189 Adenylate kinase {Cow (Bos taurus), mitochondrial 94.63
d2qm8a1323 Metallochaperone MeaB {Methylobacterium extorquens 94.56
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 94.51
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 94.5
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 94.48
d1ak2a1190 Adenylate kinase {Cow (Bos taurus), mitochondrial 94.44
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 94.27
d1r6bx3315 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 94.26
d1xpua3289 Transcription termination factor Rho, ATPase domai 94.18
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 94.17
d1akya1180 Adenylate kinase {Baker's yeast (Saccharomyces cer 94.12
d1w44a_321 NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} 94.11
d1ihua2279 Arsenite-translocating ATPase ArsA {Escherichia co 94.08
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 94.05
d1g8pa_333 ATPase subunit of magnesium chelatase, BchI {Rhodo 93.9
d1e4va1179 Adenylate kinase {Escherichia coli [TaxId: 562]} 93.88
d1cp2a_269 Nitrogenase iron protein {Clostridium pasteurianum 93.84
d1kgda_178 Guanylate kinase-like domain of Cask {Human (Homo 93.81
d1s96a_205 Guanylate kinase {Escherichia coli [TaxId: 562]} 93.79
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 93.32
d2vp4a1197 Deoxyribonucleoside kinase {Fruit fly (Drosophila 93.27
d1odfa_286 Hypothetical protein Ygr205W {Baker's yeast (Sacch 93.16
d1ny5a2247 Transcriptional activator sigm54 (NtrC1), C-termin 92.85
d1yrba1244 ATP(GTP)-binding protein PAB0955 {Pyrococcus abyss 92.8
d1ihua1296 Arsenite-translocating ATPase ArsA {Escherichia co 92.62
d4tmka_210 Thymidylate kinase {Escherichia coli [TaxId: 562]} 92.57
d1io0a_166 Tropomodulin C-terminal domain {Chicken (Gallus ga 92.41
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 92.33
d1pzna2254 DNA repair protein Rad51, catalytic domain {Archae 92.32
d1qvra3315 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 92.27
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 92.27
d1htwa_158 Hypothetical protein HI0065 {Haemophilus influenza 92.24
d1r8sa_160 ADP-ribosylation factor {Human (Homo sapiens), ARF 92.16
d1fx0a3276 Central domain of alpha subunit of F1 ATP synthase 92.06
d1jjva_205 Dephospho-CoA kinase {Haemophilus influenzae [TaxI 91.91
d1v5wa_258 Meiotic recombination protein DMC1/LIM15 homolog { 91.75
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 91.73
d1upta_169 ADP-ribosylation factor {Human (Homo sapiens), ARL 91.62
d1svia_195 Probable GTPase EngB {Bacillus subtilis [TaxId: 14 91.51
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 91.47
d2afhe1289 Nitrogenase iron protein {Azotobacter vinelandii [ 91.47
d1nlfa_274 Hexameric replicative helicase repA {Escherichia c 91.37
d1p5zb_241 Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 91.31
d1szpa2251 DNA repair protein Rad51, catalytic domain {Baker' 91.17
d1n0wa_242 DNA repair protein Rad51, catalytic domain {Human 91.07
d1svma_362 Papillomavirus large T antigen helicase domain {Si 91.06
d1zj6a1177 ADP-ribosylation factor {Human (Homo sapiens), ARL 91.04
d2ocpa1241 Deoxyguanosine kinase {Human (Homo sapiens) [TaxId 91.02
d1tmka_214 Thymidylate kinase {Baker's yeast (Saccharomyces c 90.79
d1z06a1165 Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} 90.78
d1u0la2225 Probable GTPase EngC (YjeQ), C-terminal domain {Th 90.67
d1ksha_165 ADP-ribosylation factor {Mouse (Mus musculus), ARL 90.61
d2a5ja1173 Rab2b {Human (Homo sapiens) [TaxId: 9606]} 90.58
d1mkya1171 Probable GTPase Der, N-terminal and middle domains 90.57
d1z2aa1164 Rab23 {Mouse (Mus musculus) [TaxId: 10090]} 90.55
d1deka_241 Deoxynucleoside monophosphate kinase {Bacteriophag 90.44
d2jdia3285 Central domain of alpha subunit of F1 ATP synthase 90.37
d1z0fa1166 Rab14 {Human (Homo sapiens) [TaxId: 9606]} 90.32
d1nija1222 Hypothetical protein YjiA, N-terminal domain {Esch 90.28
d1hyqa_232 Cell division regulator MinD {Archaeon Archaeoglob 90.24
d2erxa1171 di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 90.19
d1nrjb_209 Signal recognition particle receptor beta-subunit 90.13
d1wf3a1178 GTPase Era, N-terminal domain {Thermus thermophilu 90.09
d3raba_169 Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} 89.95
d2ew1a1171 Rab30 {Human (Homo sapiens) [TaxId: 9606]} 89.75
d1kaoa_167 Rap2a {Human (Homo sapiens) [TaxId: 9606]} 89.75
d2gjsa1168 Rad {Human (Homo sapiens) [TaxId: 9606]} 89.74
d1z0ja1167 Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} 89.73
d1ky3a_175 Rab-related protein ypt7p {Baker's yeast (Saccharo 89.73
d1yzqa1164 Rab6 {Human (Homo sapiens) [TaxId: 9606]} 89.68
d1z08a1167 Rab21 {Human (Homo sapiens) [TaxId: 9606]} 89.61
d1g16a_166 Rab-related protein Sec4 {Baker's yeast (Saccharom 89.51
d2atva1168 Ras-like estrogen-regulated growth inhibitor, RERG 89.46
d2f7sa1186 Rab27b {Human (Homo sapiens) [TaxId: 9606]} 89.46
d2qtvb1166 SAR1 {Baker's yeast (Saccharomyces cerevisiae) [Ta 89.4
d1f6ba_186 SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 89.31
d1egaa1179 GTPase Era, N-terminal domain {Escherichia coli [T 89.28
d1r2qa_170 Rab5a {Human (Homo sapiens) [TaxId: 9606]} 89.28
d1fzqa_176 ADP-ribosylation factor {Mouse (Mus musculus), ARL 89.25
d2fn4a1173 r-Ras {Human (Homo sapiens) [TaxId: 9606]} 89.2
d2f9la1175 Rab11b {Human (Homo sapiens) [TaxId: 9606]} 89.17
d2fh5b1207 Signal recognition particle receptor beta-subunit 89.07
d2erya1171 r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} 89.05
d2bmea1174 Rab4a {Human (Homo sapiens) [TaxId: 9606]} 88.98
d1xtqa1167 GTP-binding protein RheB {Human (Homo sapiens) [Ta 88.95
d2i1qa2258 DNA repair protein Rad51, catalytic domain {Archae 88.91
d1ctqa_166 cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9 88.9
d1udxa2180 Obg GTP-binding protein middle domain {Thermus the 88.86
d1w36d1359 Exodeoxyribonuclease V alpha chain (RecD) {Escheri 88.82
d2cxxa1184 GTP-binding protein engB {Pyrococcus horikoshii [T 88.81
d1e0sa_173 ADP-ribosylation factor {Human (Homo sapiens), ARF 88.61
d1c1ya_167 Rap1A {Human (Homo sapiens) [TaxId: 9606]} 88.52
d1lnza2185 Obg GTP-binding protein middle domain {Bacillus su 88.44
d1zd9a1164 ADP-ribosylation factor {Human (Homo sapiens), ARL 88.4
d2bcgy1194 GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisi 88.39
d1g3qa_237 Cell division regulator MinD {Archaeon Pyrococcus 88.31
d1ek0a_170 Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [T 88.3
d1kmqa_177 RhoA {Human (Homo sapiens) [TaxId: 9606]} 88.19
d1mh1a_183 Rac {Human (Homo sapiens) [TaxId: 9606]} 88.14
d2gj8a1161 Probable tRNA modification GTPase TrmE (MnmE), G d 87.87
d2g6ba1170 Rab26 {Human (Homo sapiens) [TaxId: 9606]} 87.81
d1vg8a_184 Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} 87.81
d1g41a_443 HslU {Haemophilus influenzae [TaxId: 727]} 87.79
d2atxa1185 RhoQ {Human (Homo sapiens) [TaxId: 9606]} 87.77
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 87.71
d1x3sa1177 Rab18 {Human (Homo sapiens) [TaxId: 9606]} 87.62
d2g3ya1172 GTP-binding protein GEM {Human (Homo sapiens) [Tax 87.56
d1wmsa_174 Rab9a {Human (Homo sapiens) [TaxId: 9606]} 87.52
d1u8za_168 Ras-related protein RalA {Cotton-top tamarin (Sagu 87.45
d1svsa1195 Transducin (alpha subunit) {Rat (Rattus norvegicus 87.41
d1mkya2186 Probable GTPase Der, N-terminal and middle domains 87.2
d1x1ra1169 Ras-related protein M-Ras (XRas) {Mouse (Mus muscu 86.94
d1i2ma_170 Ran {Human (Homo sapiens) [TaxId: 9606]} 86.92
d1zcba2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 86.89
d2bmja1175 Centaurin gamma 1, G domain {Human (Homo sapiens) 86.83
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 86.78
d1m7ba_179 RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} 86.46
d1tf7a1242 Circadian clock protein KaiC {Synechococcus sp. st 86.36
d2ngra_191 CDC42 {Human (Homo sapiens) [TaxId: 9606]} 86.08
d2bcjq2200 Transducin (alpha subunit) {Mouse (Mus musculus) [ 85.82
d1byia_224 Dethiobiotin synthetase {Escherichia coli [TaxId: 85.75
d1moza_182 ADP-ribosylation factor {Baker's yeast (Saccharomy 85.75
d1puia_188 Probable GTPase EngB {Escherichia coli [TaxId: 562 85.53
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 85.53
d2fu5c1173 Rab8a {Mouse (Mus musculus) [TaxId: 10090]} 84.73
d1azta2221 Transducin (alpha subunit) {Cow (Bos taurus) [TaxI 84.5
d1h65a_257 Chloroplast protein translocon GTPase Toc34 {Garde 84.46
g1f2t.1292 Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]} 84.41
d1cr2a_277 Gene 4 protein (g4p, DNA primase), helicase domain 83.7
d1xzpa2160 TrmE GTPase domain {Thermotoga maritima [TaxId: 23 82.88
d1g7sa4227 Initiation factor IF2/eIF5b, N-terminal (G) domain 82.25
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 81.76
d1tuea_205 Replication protein E1 helicase domain {Human papi 81.54
d1t9ha2231 Probable GTPase EngC (YjeQ), C-terminal domain {Ba 81.02
d2bv3a2276 Elongation factor G (EF-G), N-terminal (G) domain 80.67
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: CED-4, NB-ARC domain
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-38  Score=330.00  Aligned_cols=245  Identities=16%  Similarity=0.126  Sum_probs=193.5

Q ss_pred             CCccchhHHHHHHHHHhh---cCCCeEEEEEcCCCCcHHHHHHHHHhhhcc-CCCCccEEEEEEEcCcccHHHHHHHH--
Q 045686          152 GKTVGLDSIISEVWRCIE---DHNEKVIGLYGMGGVGKTTLLKKLNNKFRD-TGHDFDLVIWVKVSRDANLEKIQESI--  225 (885)
Q Consensus       152 ~~~vgr~~~~~~l~~~L~---~~~~~vi~I~G~gG~GKTtLa~~v~~~~~~-~~~~f~~~~wv~v~~~~~~~~~~~~i--  225 (885)
                      +.++||+.++++|+++|.   +....+|+|+||||+||||||+++|++... .+.+|++++|+++++.++...+...+  
T Consensus        20 ~~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~~   99 (277)
T d2a5yb3          20 MTCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDI   99 (277)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHHH
T ss_pred             CceeCcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCCHHHHHHHHHH
Confidence            457899999999999994   356789999999999999999999987532 35789999999999988766665544  


Q ss_pred             -HHHcCCCcccc-----CCCChhHHHHHHHHHhcCCCeEEEEecCCCccccccccccccccccCCCCCEEEEEcCChhHH
Q 045686          226 -LRRFEIPDQMW-----IGKDEDGRANEILSNLRGKKFVLLLDDVWERLDLSKVGVSDLLDDSSQTGSKIVFTTRSEEVC  299 (885)
Q Consensus       226 -~~~l~~~~~~~-----~~~~~~~~~~~l~~~l~~k~~LlVLDdv~~~~~~~~~~~~~~l~~~~~~gs~IivTTR~~~v~  299 (885)
                       +..++......     ...........+.+.+.++|+|+||||||+...+..+         ...||+||||||+..|+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~~~~~~~---------~~~~srilvTTR~~~v~  170 (277)
T d2a5yb3         100 LLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWA---------QELRLRCLVTTRDVEIS  170 (277)
T ss_dssp             HHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCHHHHHHH---------HHTTCEEEEEESBGGGG
T ss_pred             HHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHHhhhhhh---------cccCceEEEEeehHHHH
Confidence             33443322110     1112233444577888999999999999987766532         23479999999999999


Q ss_pred             hhhccc-ceeeccCCChHHHHHHHHHHhcCcccCCccchHHHHHHHHHHhCCchhHHHHHHHHHhcCCChhhHHHHHHHH
Q 045686          300 GEMGAR-RRFRVECLSPEAALDLFRYKVGEDVYSSHFEISNLAQTVVEECRGLPLALVTIGHAMASRMGPTQWRYAVGEL  378 (885)
Q Consensus       300 ~~~~~~-~~~~l~~L~~~~~~~Lf~~~~~~~~~~~~~~~~~~~~~I~~~c~GlPLai~~~~~~l~~~~~~~~w~~~~~~l  378 (885)
                      ..+... +.|++++|+.+|||+||.++++...  ..+..++++++|+++|||+||||+++|+.|+. ++.+.|....+.+
T Consensus       171 ~~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~--~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~-k~~~~~~~~~~~L  247 (277)
T d2a5yb3         171 NAASQTCEFIEVTSLEIDECYDFLEAYGMPMP--VGEKEEDVLNKTIELSSGNPATLMMFFKSCEP-KTFEKMAQLNNKL  247 (277)
T ss_dssp             GGCCSCEEEEECCCCCHHHHHHHHHHTSCCCC----CHHHHHHHHHHHHHTTCHHHHHHHHTTCCS-SSHHHHHHHHHHH
T ss_pred             HhcCCCCceEECCCCCHHHHHHHHHHHhCCcc--CchhhHHHHHHHHHHhCCCHHHHHHHHHHhcc-CCHHHHHHHHHHH
Confidence            876654 6799999999999999999887553  33456788999999999999999999999986 6788999988888


Q ss_pred             hcCcccccCCCCcccccccccccccccchhhhHHhhh
Q 045686          379 QRYPFKFAGMGNSVFPILRFSYDSLREDIFKTCFLYC  415 (885)
Q Consensus       379 ~~~~~~~~~~~~~~~~~l~~sy~~L~~~~~k~cfl~~  415 (885)
                      +....      .++..++.+||++||++ +|+||.++
T Consensus       248 ~~~~~------~~v~~il~~sY~~L~~~-lk~c~~~l  277 (277)
T d2a5yb3         248 ESRGL------VGVECITPYSYKSLAMA-LQRCVEVL  277 (277)
T ss_dssp             HHHCS------STTCCCSSSSSSSHHHH-HHHHHHTS
T ss_pred             hcCcH------HHHHHHHHHHHhcccHH-HHHHHHhC
Confidence            65322      47999999999999996 99999874
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Back     information, alignment and structure
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Back     information, alignment and structure
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Back     information, alignment and structure
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Back     information, alignment and structure
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Back     information, alignment and structure
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]} Back     information, alignment and structure
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]} Back     information, alignment and structure
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]} Back     information, alignment and structure
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Back     information, alignment and structure
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} Back     information, alignment and structure
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]} Back     information, alignment and structure
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]} Back     information, alignment and structure
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]} Back     information, alignment and structure
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Back     information, alignment and structure
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]} Back     information, alignment and structure
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]} Back     information, alignment and structure
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]} Back     information, alignment and structure
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]} Back     information, alignment and structure
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]} Back     information, alignment and structure
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]} Back     information, alignment and structure
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]} Back     information, alignment and structure
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]} Back     information, alignment and structure
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]} Back     information, alignment and structure
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]} Back     information, alignment and structure
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure