Citrus Sinensis ID: 045760
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 700 | 2.2.26 [Sep-21-2011] | |||||||
| P36181 | 699 | Heat shock cognate protei | N/A | no | 0.997 | 0.998 | 0.929 | 0.0 | |
| Q07078 | 699 | Heat shock protein 81-3 O | yes | no | 0.995 | 0.997 | 0.901 | 0.0 | |
| Q69QQ6 | 699 | Heat shock protein 81-2 O | yes | no | 0.995 | 0.997 | 0.901 | 0.0 | |
| O03986 | 699 | Heat shock protein 90-4 O | yes | no | 0.995 | 0.997 | 0.915 | 0.0 | |
| P55737 | 699 | Heat shock protein 90-2 O | yes | no | 0.995 | 0.997 | 0.929 | 0.0 | |
| Q0J4P2 | 699 | Heat shock protein 81-1 O | yes | no | 0.995 | 0.997 | 0.914 | 0.0 | |
| A2YWQ1 | 699 | Heat shock protein 81-1 O | N/A | no | 0.995 | 0.997 | 0.914 | 0.0 | |
| P51818 | 699 | Heat shock protein 90-3 O | yes | no | 0.995 | 0.997 | 0.925 | 0.0 | |
| P51819 | 703 | Heat shock protein 83 OS= | N/A | no | 0.992 | 0.988 | 0.884 | 0.0 | |
| P27323 | 700 | Heat shock protein 90-1 O | no | no | 0.994 | 0.994 | 0.847 | 0.0 |
| >sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1 | Back alignment and function desciption |
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Score = 1221 bits (3160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/698 (92%), Positives = 680/698 (97%)
Query: 3 SETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQP 62
S+ ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QP
Sbjct: 2 SDVETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQP 61
Query: 63 ELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 122
ELFIHIIPDK NN+L+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQF
Sbjct: 62 ELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQF 121
Query: 123 GVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKED 182
GVGFYSAYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKED
Sbjct: 122 GVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKED 181
Query: 183 QLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEK 242
QLEYLEERRLKDLIKKHSEFISYPISLW+EKT EKEISDDE+EEEKKDEEGKVE+VDEEK
Sbjct: 182 QLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEEEEEKKDEEGKVEEVDEEK 241
Query: 243 EKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFS 302
EKEEKKKKK+KEVS+EWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFS
Sbjct: 242 EKEEKKKKKVKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFS 301
Query: 303 VEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVD 362
VEGQLEFKA+LFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNC+ELIPEYL FVKGIVD
Sbjct: 302 VEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVD 361
Query: 363 SEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIH 422
SEDLPLNISRETLQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIH
Sbjct: 362 SEDLPLNISRETLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFSKNLKLGIH 421
Query: 423 EDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEK 482
EDS N+ K AELLRYHSTKSGDE+TSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEK
Sbjct: 422 EDSQNRAKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEK 481
Query: 483 LKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKFEG 542
LKKKGYEVLYMVDAIDEY++GQLKEFEGKKLVSATKEGLKLDESEDEKKK+E LKEKFEG
Sbjct: 482 LKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEG 541
Query: 543 LCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSS 602
LCKV+KDVLGDKVEKV+VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRD+SMAGYMSS
Sbjct: 542 LCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSS 601
Query: 603 KKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHR 662
KKTMEINPEN IM+ELRKRADADKNDKSVKDLVLLLFETALLTSGFSL++PNTFGNRIHR
Sbjct: 602 KKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHR 661
Query: 663 MLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 700
MLKLGLSI+E++GDADADMP LED DAEGSKMEEVD
Sbjct: 662 MLKLGLSIDEESGDADADMPALEDPEADAEGSKMEEVD 699
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Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function. Solanum lycopersicum (taxid: 4081) |
| >sp|Q07078|HSP83_ORYSJ Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q69QQ6|HSP82_ORYSJ Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1 | Back alignment and function description |
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| >sp|O03986|HS904_ARATH Heat shock protein 90-4 OS=Arabidopsis thaliana GN=HSP90-4 PE=2 SV=1 | Back alignment and function description |
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| >sp|P55737|HS902_ARATH Heat shock protein 90-2 OS=Arabidopsis thaliana GN=HSP90-2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q0J4P2|HSP81_ORYSJ Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2 | Back alignment and function description |
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| >sp|A2YWQ1|HSP81_ORYSI Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1 | Back alignment and function description |
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| >sp|P51818|HS903_ARATH Heat shock protein 90-3 OS=Arabidopsis thaliana GN=HSP90-3 PE=1 SV=2 | Back alignment and function description |
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| >sp|P51819|HSP83_IPONI Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1 | Back alignment and function description |
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| >sp|P27323|HS901_ARATH Heat shock protein 90-1 OS=Arabidopsis thaliana GN=HSP90-1 PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 700 | ||||||
| 381144430 | 700 | Hsp90 [Citrus sinensis] | 1.0 | 1.0 | 1.0 | 0.0 | |
| 381144432 | 700 | Hsp90 [Citrus sinensis] | 1.0 | 1.0 | 0.99 | 0.0 | |
| 359495606 | 699 | PREDICTED: heat shock cognate protein 80 | 0.997 | 0.998 | 0.952 | 0.0 | |
| 147770307 | 699 | hypothetical protein VITISV_029391 [Viti | 0.997 | 0.998 | 0.951 | 0.0 | |
| 159459822 | 699 | heat shock protein 90 [Vitis pseudoretic | 0.997 | 0.998 | 0.946 | 0.0 | |
| 225462013 | 704 | PREDICTED: heat shock cognate protein 80 | 0.997 | 0.991 | 0.935 | 0.0 | |
| 255582806 | 698 | heat shock protein, putative [Ricinus co | 0.995 | 0.998 | 0.962 | 0.0 | |
| 224056837 | 699 | predicted protein [Populus trichocarpa] | 0.997 | 0.998 | 0.939 | 0.0 | |
| 356552478 | 700 | PREDICTED: heat shock cognate protein 80 | 1.0 | 1.0 | 0.96 | 0.0 | |
| 351725976 | 700 | heat shock protein 90-2 [Glycine max] gi | 1.0 | 1.0 | 0.958 | 0.0 |
| >gi|381144430|gb|AFF58923.1| Hsp90 [Citrus sinensis] | Back alignment and taxonomy information |
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Score = 1420 bits (3677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 700/700 (100%), Positives = 700/700 (100%)
Query: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA
Sbjct: 1 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDA 60
Query: 61 QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIG 120
QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIG
Sbjct: 61 QPELFIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIG 120
Query: 121 QFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK 180
QFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK
Sbjct: 121 QFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLK 180
Query: 181 EDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDE 240
EDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDE
Sbjct: 181 EDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDE 240
Query: 241 EKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKH 300
EKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKH
Sbjct: 241 EKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKH 300
Query: 301 FSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGI 360
FSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGI
Sbjct: 301 FSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGI 360
Query: 361 VDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLG 420
VDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLG
Sbjct: 361 VDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLG 420
Query: 421 IHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFL 480
IHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFL
Sbjct: 421 IHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFL 480
Query: 481 EKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKF 540
EKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKF
Sbjct: 481 EKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKF 540
Query: 541 EGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM 600
EGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM
Sbjct: 541 EGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM 600
Query: 601 SSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRI 660
SSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRI
Sbjct: 601 SSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRI 660
Query: 661 HRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 700
HRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD
Sbjct: 661 HRMLKLGLSIEEDAGDADADMPPLEDAADDAEGSKMEEVD 700
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Source: Citrus sinensis Species: Citrus sinensis Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|381144432|gb|AFF58924.1| Hsp90 [Citrus sinensis] | Back alignment and taxonomy information |
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| >gi|359495606|ref|XP_003635036.1| PREDICTED: heat shock cognate protein 80-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147770307|emb|CAN62488.1| hypothetical protein VITISV_029391 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|159459822|gb|ABW96308.1| heat shock protein 90 [Vitis pseudoreticulata] | Back alignment and taxonomy information |
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| >gi|225462013|ref|XP_002273244.1| PREDICTED: heat shock cognate protein 80-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255582806|ref|XP_002532177.1| heat shock protein, putative [Ricinus communis] gi|223528145|gb|EEF30214.1| heat shock protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224056837|ref|XP_002299048.1| predicted protein [Populus trichocarpa] gi|222846306|gb|EEE83853.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356552478|ref|XP_003544594.1| PREDICTED: heat shock cognate protein 80-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|351725976|ref|NP_001236599.1| heat shock protein 90-2 [Glycine max] gi|208964722|gb|ACI31551.1| heat shock protein 90-2 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 700 | ||||||
| TAIR|locus:2161790 | 699 | HSP81-3 "heat shock protein 81 | 0.635 | 0.636 | 0.818 | 7.4e-295 | |
| TAIR|locus:2161775 | 699 | Hsp81.4 "HEAT SHOCK PROTEIN 81 | 0.635 | 0.636 | 0.809 | 1.8e-293 | |
| UNIPROTKB|Q76LV2 | 733 | HSP90AA1 "Heat shock protein H | 0.622 | 0.594 | 0.636 | 4.4e-235 | |
| UNIPROTKB|Q9GKX7 | 733 | HSP90AA1 "Heat shock protein H | 0.622 | 0.594 | 0.636 | 4.4e-235 | |
| UNIPROTKB|O02705 | 733 | HSP90AA1 "Heat shock protein H | 0.622 | 0.594 | 0.636 | 4.4e-235 | |
| UNIPROTKB|P07900 | 732 | HSP90AA1 "Heat shock protein H | 0.622 | 0.595 | 0.636 | 5.7e-235 | |
| RGD|631409 | 733 | Hsp90aa1 "heat shock protein 9 | 0.622 | 0.594 | 0.634 | 1.9e-234 | |
| MGI|MGI:96250 | 733 | Hsp90aa1 "heat shock protein 9 | 0.622 | 0.594 | 0.634 | 2.4e-234 | |
| UNIPROTKB|P46633 | 733 | HSP90AA1 "Heat shock protein H | 0.622 | 0.594 | 0.627 | 4.5e-233 | |
| UNIPROTKB|P11501 | 728 | HSP90AA1 "Heat shock protein H | 0.622 | 0.598 | 0.632 | 1.5e-232 |
| TAIR|locus:2161790 HSP81-3 "heat shock protein 81-3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1861 (660.2 bits), Expect = 7.4e-295, Sum P(2) = 7.4e-295
Identities = 366/447 (81%), Positives = 383/447 (85%)
Query: 255 VSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILF 314
VSHEW LVNKQKPIWMRKPEEI KEEYAAFYKSL+NDWEEHLAVKHFSVEGQLEFKAILF
Sbjct: 254 VSHEWDLVNKQKPIWMRKPEEINKEEYAAFYKSLSNDWEEHLAVKHFSVEGQLEFKAILF 313
Query: 315 VPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRET 374
VPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGIVDSEDLPLNISRET
Sbjct: 314 VPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRET 373
Query: 375 LQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAEL 434
LQQNKILKVIRKNLVKKC+ELF EIAENKEDYNKFYE+FSKNLKLGIHEDS N+TK+AEL
Sbjct: 374 LQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKIAEL 433
Query: 435 LRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMV 494
LRYHSTKSGDELTSLKDYVTRMKEGQNDI+YITGESKKAVENSPFLEKLKKKG EVLYMV
Sbjct: 434 LRYHSTKSGDELTSLKDYVTRMKEGQNDIFYITGESKKAVENSPFLEKLKKKGIEVLYMV 493
Query: 495 DAIDEYAVGQLKEFEGKKLVSATXXXXXXXXXXXXXXXXXXXXXXXXXXCKVIKDVLGXX 554
DAIDEYA+GQLKEFEGKKLVSAT CKVIKDVLG
Sbjct: 494 DAIDEYAIGQLKEFEGKKLVSATKEGLKLDETEDEKKKKEELKEKFEGLCKVIKDVLGDK 553
Query: 555 XXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPI 614
PCCLVTGEYGWTANMERIMKAQALRD+SM GYMSSKKTMEINPEN I
Sbjct: 554 VEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMGGYMSSKKTMEINPENSI 613
Query: 615 MEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIEED- 673
M+ELRKRADADKNDKSVKD TSGFSLD+PNTFG+RIHRMLKLGLSI++D
Sbjct: 614 MDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGSRIHRMLKLGLSIDDDD 673
Query: 674 AGDADADMPPLEDAADDAEGSKMEEVD 700
+ADADMPPLED AD AEGSKMEEVD
Sbjct: 674 VVEADADMPPLEDDAD-AEGSKMEEVD 699
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| TAIR|locus:2161775 Hsp81.4 "HEAT SHOCK PROTEIN 81.4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q76LV2 HSP90AA1 "Heat shock protein HSP 90-alpha" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9GKX7 HSP90AA1 "Heat shock protein HSP 90-alpha" [Equus caballus (taxid:9796)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O02705 HSP90AA1 "Heat shock protein HSP 90-alpha" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P07900 HSP90AA1 "Heat shock protein HSP 90-alpha" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|631409 Hsp90aa1 "heat shock protein 90, alpha (cytosolic), class A member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:96250 Hsp90aa1 "heat shock protein 90, alpha (cytosolic), class A member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P46633 HSP90AA1 "Heat shock protein HSP 90-alpha" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P11501 HSP90AA1 "Heat shock protein HSP 90-alpha" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P24724 | HSP90_THEPA | No assigned EC number | 0.6890 | 0.9885 | 0.9597 | yes | no |
| Q4R4T5 | HS90B_MACFA | No assigned EC number | 0.6853 | 0.9857 | 0.9530 | N/A | no |
| P46598 | HSP90_CANAL | No assigned EC number | 0.6340 | 0.9957 | 0.9858 | N/A | no |
| Q5R710 | HS90B_PONAB | No assigned EC number | 0.6839 | 0.9857 | 0.9530 | yes | no |
| Q08277 | HSP82_MAIZE | No assigned EC number | 0.8231 | 0.9957 | 0.9748 | N/A | no |
| P41887 | HSP90_SCHPO | No assigned EC number | 0.6614 | 0.9971 | 0.9914 | yes | no |
| P55737 | HS902_ARATH | No assigned EC number | 0.9298 | 0.9957 | 0.9971 | yes | no |
| P07900 | HS90A_HUMAN | No assigned EC number | 0.6962 | 0.99 | 0.9467 | yes | no |
| P07901 | HS90A_MOUSE | No assigned EC number | 0.6925 | 0.99 | 0.9454 | yes | no |
| P51818 | HS903_ARATH | No assigned EC number | 0.9256 | 0.9957 | 0.9971 | yes | no |
| P36181 | HSP80_SOLLC | No assigned EC number | 0.9297 | 0.9971 | 0.9985 | N/A | no |
| Q7PT10 | HSP83_ANOGA | No assigned EC number | 0.7001 | 0.9557 | 0.9291 | yes | no |
| Q69QQ6 | HSP82_ORYSJ | No assigned EC number | 0.9017 | 0.9957 | 0.9971 | yes | no |
| Q25293 | HSP83_LEIIN | No assigned EC number | 0.6746 | 0.9514 | 0.9500 | yes | no |
| O44001 | HSP90_EIMTE | No assigned EC number | 0.7165 | 0.9928 | 0.9747 | N/A | no |
| Q61W58 | HSP90_CAEBR | No assigned EC number | 0.6558 | 0.9914 | 0.9830 | N/A | no |
| Q4UDU8 | HSP90_THEAN | No assigned EC number | 0.6813 | 0.9957 | 0.9653 | yes | no |
| Q9GKX7 | HS90A_HORSE | No assigned EC number | 0.6952 | 0.99 | 0.9454 | yes | no |
| P27741 | HSP83_LEIAM | No assigned EC number | 0.6691 | 0.95 | 0.9486 | N/A | no |
| Q0J4P2 | HSP81_ORYSJ | No assigned EC number | 0.9145 | 0.9957 | 0.9971 | yes | no |
| P27323 | HS901_ARATH | No assigned EC number | 0.8473 | 0.9942 | 0.9942 | no | no |
| P46633 | HS90A_CRIGR | No assigned EC number | 0.6869 | 0.99 | 0.9454 | yes | no |
| Q07078 | HSP83_ORYSJ | No assigned EC number | 0.9017 | 0.9957 | 0.9971 | yes | no |
| P82995 | HS90A_RAT | No assigned EC number | 0.6925 | 0.99 | 0.9454 | yes | no |
| O43109 | HSP90_PODAS | No assigned EC number | 0.6761 | 0.9471 | 0.9457 | yes | no |
| P12861 | HSP83_TRYBB | No assigned EC number | 0.6571 | 0.9928 | 0.9886 | N/A | no |
| Q90474 | H90A1_DANRE | No assigned EC number | 0.6726 | 0.9928 | 0.9586 | yes | no |
| P02828 | HSP83_DROME | No assigned EC number | 0.6569 | 0.9957 | 0.9721 | yes | no |
| P54651 | HSC90_DICDI | No assigned EC number | 0.6963 | 0.9814 | 0.9814 | yes | no |
| P51819 | HSP83_IPONI | No assigned EC number | 0.8842 | 0.9928 | 0.9886 | N/A | no |
| O02705 | HS90A_PIG | No assigned EC number | 0.6966 | 0.99 | 0.9454 | yes | no |
| O02192 | HSP83_DROAV | No assigned EC number | 0.6550 | 0.9957 | 0.9734 | N/A | no |
| Q76LV2 | HS90A_BOVIN | No assigned EC number | 0.6952 | 0.99 | 0.9454 | yes | no |
| O03986 | HS904_ARATH | No assigned EC number | 0.9155 | 0.9957 | 0.9971 | yes | no |
| P06660 | HSP85_TRYCR | No assigned EC number | 0.6643 | 0.99 | 0.9843 | N/A | no |
| A2YWQ1 | HSP81_ORYSI | No assigned EC number | 0.9145 | 0.9957 | 0.9971 | N/A | no |
| Q18688 | HSP90_CAEEL | No assigned EC number | 0.6600 | 0.99 | 0.9871 | yes | no |
| P04809 | HSP83_DROPS | No assigned EC number | 0.6569 | 0.9957 | 0.9721 | yes | no |
| Q4R4P1 | HS90A_MACFA | No assigned EC number | 0.6966 | 0.99 | 0.9454 | N/A | no |
| O61998 | HSP90_BRUPA | No assigned EC number | 0.6577 | 0.9885 | 0.9651 | N/A | no |
| P30946 | HS90A_RABIT | No assigned EC number | 0.6946 | 0.96 | 0.9682 | yes | no |
| Q04619 | HS90B_CHICK | No assigned EC number | 0.6801 | 0.99 | 0.9558 | yes | no |
| A5A6K9 | HS90A_PANTR | No assigned EC number | 0.6952 | 0.99 | 0.9454 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | eugene3.00013054 | hypothetical protein (699 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | fgenesh4_pm.C_LG_XV000408 | • | • | • | 0.810 | ||||||
 | fgenesh4_pm.C_LG_IV000317 | • | 0.800 | ||||||||
 | fgenesh4_pg.C_LG_II001977 | • | 0.800 | ||||||||
 | estExt_Genewise1_v1.C_440672 | • | 0.800 | ||||||||
 | eugene3.26620001 | • | 0.458 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 700 | |||
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 0.0 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 0.0 | |
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-169 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 2e-24 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 1e-11 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 1e-09 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 4e-09 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 2e-05 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 0.001 |
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
Score = 931 bits (2406), Expect = 0.0
Identities = 464/701 (66%), Positives = 580/701 (82%), Gaps = 6/701 (0%)
Query: 5 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPEL 64
TETFAFQAEINQL+SLIINTFYSNKEIFLRELISN+SDA DKIR++SLTD S L P L
Sbjct: 2 TETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRL 61
Query: 65 FIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGV 124
I ++PDK N +L++ D+GIGMTKADLVNNLGTIARSGTK FMEAL AG D+SMIGQFGV
Sbjct: 62 CIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGV 121
Query: 125 GFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQL 184
GFYSAYLVA++V VT+K+N DE Y+WES AGG+FT+T ++ RGT+ITLHLKEDQ+
Sbjct: 122 GFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESDM-KRGTRITLHLKEDQM 180
Query: 185 EYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISD-DEDEEEKKDEEG---KVEDVDE 240
EYLE RRLK+LIKKHSEFI Y I L +EKTTEKE++D DE++ +K DE+G KVE+V E
Sbjct: 181 EYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEEPKVEEVKE 240
Query: 241 EKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKH 300
E ++KK KK+KEV+ E+ + NK KP+W R P+++TKEEYAAFYK+++NDWE+ A KH
Sbjct: 241 GDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKH 300
Query: 301 FSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGI 360
FSVEGQLEF++I+FVPKRAPFD+F+ KK NNIKLYVRRVFIMDNCE+L P++LGFVKG+
Sbjct: 301 FSVEGQLEFRSIMFVPKRAPFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGV 360
Query: 361 VDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLG 420
VDSEDLPLNISRE LQQNKILKVIRKN+VKKC+E+F E+AENKEDY +FYE F KN+KLG
Sbjct: 361 VDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLG 420
Query: 421 IHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFL 480
IHED+ N+ KL ELLR++ST+SG+E+T+LKDYVTRMK GQ IYYITG+SKK +E SPF+
Sbjct: 421 IHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFI 480
Query: 481 EKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKF 540
E+ +++G EVL+M + IDEY + Q+K+FE KK TKEG+ +ESE+EK+++E K
Sbjct: 481 EQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAAC 540
Query: 541 EGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYM 600
E LCK +K+VLGDKVEKV+VS+R+ SPC LVT E+GW+A+ME+IM+ QALRD+SMA YM
Sbjct: 541 EKLCKTMKEVLGDKVEKVIVSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYM 600
Query: 601 SSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRI 660
SKKTME+NP +PI++ELR+R AD+NDK+VKDLV LLF+T+LLTSGF L+DP + RI
Sbjct: 601 MSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERI 660
Query: 661 HRMLKLGLSIEEDAGDADADMPPLEDAADDAEG-SKMEEVD 700
+RM+KLGLS++E+ +A A+ G S ME+VD
Sbjct: 661 NRMIKLGLSLDEEEEEAAEAPVAETAPAEVTAGTSSMEQVD 701
|
Length = 701 |
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 700 | |||
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| KOG0020 | 785 | consensus Endoplasmic reticulum glucose-regulated | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 100.0 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.67 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 99.49 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 99.49 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 99.43 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 99.33 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 99.2 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 99.05 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 99.02 | |
| KOG1979 | 694 | consensus DNA mismatch repair protein - MLH1 famil | 98.67 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 98.64 | |
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 98.61 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 98.6 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 98.58 | |
| KOG1978 | 672 | consensus DNA mismatch repair protein - MLH2/PMS1/ | 98.54 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 98.5 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 98.47 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.46 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 98.32 | |
| KOG1977 | 1142 | consensus DNA mismatch repair protein - MLH3 famil | 97.97 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 97.36 | |
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 97.36 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 97.33 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 97.29 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 97.18 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 97.17 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 97.03 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 97.03 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 96.98 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.97 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.96 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 96.96 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 96.87 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 96.82 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.81 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 96.78 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 96.76 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 96.74 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 96.7 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 96.69 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 96.65 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 96.61 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 96.59 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 96.52 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 96.52 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 96.45 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 96.42 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 96.4 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 96.31 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 96.3 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 96.2 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 96.11 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 96.11 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 96.0 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 95.92 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 95.9 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 95.86 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 95.86 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 95.82 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 95.58 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 95.47 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 95.39 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 95.35 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 95.24 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 95.09 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 95.02 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 94.99 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 94.82 | |
| PRK13557 | 540 | histidine kinase; Provisional | 94.74 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 94.52 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 94.44 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 94.17 | |
| KOG0787 | 414 | consensus Dehydrogenase kinase [Signal transductio | 93.74 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 93.66 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 93.47 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 90.98 | |
| COG4251 | 750 | Bacteriophytochrome (light-regulated signal transd | 90.97 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 90.63 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 88.92 | |
| COG2172 | 146 | RsbW Anti-sigma regulatory factor (Ser/Thr protein | 87.79 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 87.15 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 85.72 | |
| COG2205 | 890 | KdpD Osmosensitive K+ channel histidine kinase [Si | 84.89 | |
| COG4192 | 673 | Signal transduction histidine kinase regulating ph | 81.88 |
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-173 Score=1481.93 Aligned_cols=696 Identities=66% Similarity=1.065 Sum_probs=609.0
Q ss_pred cccccchhhhHHHHHHHHHHcCCCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCC
Q 045760 4 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSG 83 (700)
Q Consensus 4 ~~e~~~Fq~e~~~ll~ll~~~LYs~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnG 83 (700)
|+|+|+||||+++||+||+|+|||++++|||||||||+|||+++||++++++.+.+..+++.|+|..|.++++|+|.|||
T Consensus 1 ~~e~~~Fqae~~~Ll~lli~slYs~~~iflRELIsNA~DA~~k~r~~~l~~~~~~~~~~~~~I~i~~d~~~~~L~I~DnG 80 (701)
T PTZ00272 1 MTETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESPRLCIRVVPDKENKTLTVEDNG 80 (701)
T ss_pred CCceEecHHHHHHHHHHHHhcccCCccHhHHHHHhhHHHHHHHHHHHhcCCchhcCCCCceEEEEEEcCCCCEEEEEECC
Confidence 77999999999999999999999999999999999999999999999999998777677889999999888999999999
Q ss_pred CCCCHHHHHHHHhHhhhcCchhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEEEeC
Q 045760 84 IGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRD 163 (700)
Q Consensus 84 iGMt~~dl~~~l~tIa~S~~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i~~~ 163 (700)
+|||++||.++||+||+||++.|+++++.+.+..+|||||||||||||||++|+|+||+.++.+|.|+|+|+|.|+|.+.
T Consensus 81 iGMt~edl~~~LgtIa~SGt~~f~~~~~~~~~~~~iGqFGvGfyS~Fmvad~V~V~Srs~~~~~~~W~s~~~g~y~i~~~ 160 (701)
T PTZ00272 81 IGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQFGVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITST 160 (701)
T ss_pred CCCCHHHHHHHhhhhhhcchHHHHHHhhccCCccccCCCCcceEEEEEeccEEEEEEecCCCceEEEEECCCCcEEEEeC
Confidence 99999999999999999999999988865556789999999999999999999999998767899999999999999986
Q ss_pred CCCCCCCCceEEEEEeccchhhhccHHHHHHHHHHHhCCCCcceEEeeecccccccCCchhhhh----hhhccCCccccc
Q 045760 164 TSGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEE----KKDEEGKVEDVD 239 (700)
Q Consensus 164 ~~~~~~~~GT~I~L~lk~~~~e~l~~~~i~~ii~~ys~~l~~PI~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 239 (700)
+. ....+||+|+|||+++..+|++.++|+++|++||+||+|||+++...+...++++++++.. ++++++.+++.+
T Consensus 161 ~~-~~~~~GT~I~L~Lk~d~~ef~~~~~i~~li~kYs~fi~~PI~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (701)
T PTZ00272 161 PE-SDMKRGTRITLHLKEDQMEYLEPRRLKELIKKHSEFIGYDIELMVEKTTEKEVTDEDEEDTKKADEDGEEPKVEEVK 239 (701)
T ss_pred CC-CCCCCCCEEEEEECCchHHhccHHHHHHHHHHhccccCcceEEeeccccccccCcchhhhccccccccccccccccc
Confidence 43 3458999999999999999999999999999999999999999865443333322211100 001111122221
Q ss_pred hHHHHHhhhhccceeeecceeeeccCCCCccCCCCCCCHHHHHHHHHHHhcCccCcccceeeecccceeeEEEEEecCCC
Q 045760 240 EEKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRA 319 (700)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~N~~~~~W~r~~~~i~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~ 319 (700)
++++.++++.+++++++++|++||+++|||+|+|++||+++|++|||+++++|++||+|+||++||+++|+||||||+++
T Consensus 240 ~~~~~~~~k~~~~~~~~~~~e~iN~~~~lW~r~~~~i~~eey~~Fyk~~~~~~~~Pl~~ih~~~eg~~~~~~llyiP~~~ 319 (701)
T PTZ00272 240 EGDEGKKKKTKKVKEVTKEYEVQNKHKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRA 319 (701)
T ss_pred ccccccccccccccccccchhhcccCcCCeecCcccCCHHHHHHHHHHhcCCcCCCceeeeeccCCceeeEEEEEeCCCC
Confidence 22222234456666777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCceEEEeeeeeccccccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHHH
Q 045760 320 PFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEI 399 (700)
Q Consensus 320 p~~~~~~~~~~~~i~Ly~~rv~I~d~~~~llP~~l~Fv~gvVds~dLplnvSRE~lq~~~~l~~i~~~l~~k~~~~l~~l 399 (700)
|+++|+.+..+++|+||||||||+|+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+++|.++
T Consensus 320 ~~~~~~~~~~~~~i~LY~~rVfI~d~~~~llP~~l~FvkGVVDS~DLpLNvSRE~LQ~~~~l~~i~~~i~~ki~~~l~~l 399 (701)
T PTZ00272 320 PFDMFEPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVIRKNIVKKCLEMFDEV 399 (701)
T ss_pred ccchhhhhhccCceEEEEeeEEEecchhhhhHHHHhheeEEeecCCCCCccCHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998754357899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCHHHHHHHHHHHhhhhhcccccChhhHHHHhccccccccCCCCceecHHHHHHhhccCCCcEEEEeCCCHHHHhcChh
Q 045760 400 AENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPF 479 (700)
Q Consensus 400 ~~d~e~y~~f~~~~~~~lK~G~~~D~~~~~~l~~llrf~ss~~~~~~~sL~eYv~rm~~~q~~IYy~~~~~~~~~~~sp~ 479 (700)
|+++++|.+||++||.+||+|+++|..||++|++||||+||.++++++||++|++|||++|+.|||++|+|++++++|||
T Consensus 400 a~~~~~y~~f~~~~g~~lK~G~~~D~~~~~~l~~Llrf~ss~~~~~~~sL~eYv~rmk~~Q~~IYY~~~~s~~~~~~sP~ 479 (701)
T PTZ00272 400 AENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPF 479 (701)
T ss_pred hhCHHHHHHHHHHHhhhhheeeccCHhHHHHHHHhhceeecCCCCceeeHHHHHHhhccCCceEEEEeCCCHHHHHhChH
Confidence 99999999999999999999999999999999999999999866789999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCchHHHHHHHhhccCceeEEecccCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHhCCcccEEE
Q 045760 480 LEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKFEGLCKVIKDVLGDKVEKVV 559 (700)
Q Consensus 480 le~~~~kg~eVL~l~dpiDe~~l~~L~~y~gk~f~sV~~~~~~l~~~~e~k~~~~~~~~e~~~L~~~lk~~L~~kV~~V~ 559 (700)
+|.|++||||||||+||||||||++|++|+|++|+||+++++++++.+++++..+..++++++|++|||++|+++|.+|+
T Consensus 480 lE~~~~kg~EVL~l~dpiDe~~i~~l~ey~~k~f~sV~~~~~~l~~~~~e~~~~~~~~~~~~~L~~~~k~~L~~kV~~Vk 559 (701)
T PTZ00272 480 IEQARRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVI 559 (701)
T ss_pred HHHHHhCCCeEEEeCCcHHHHHHHHHHhcCCCceEecccccccccccccchhhhhhhHHHHHHHHHHHHHHhCCcccEEE
Confidence 99999999999999999999999999999999999999999987643322222233456799999999999999999999
Q ss_pred EeecCCCCCEEEEeCCCcccHHHHHHHHHHhcccCcccccCCCCceEEeCCCChHHHHHHHhhccCCCchhHHHHHHHHH
Q 045760 560 VSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLF 639 (700)
Q Consensus 560 vS~RL~~sPa~lv~~e~g~s~~Mer~mk~q~~~~~~~~~~~~~k~iLEINp~HplIkkL~~~~~~d~~~~~~~~~~~~Ly 639 (700)
+|+||++||||||++++|+|++|+|||++|++++.++..++..++||||||+||||++|+++...+++++.++++|+|||
T Consensus 560 vS~RL~~sPa~lv~~e~g~s~~Merimkaq~~~~~~~~~~~~~kkiLEINP~HpiIk~L~~~~~~~~~~~~~~~la~~Ly 639 (701)
T PTZ00272 560 VSERLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAVKDLVFLLF 639 (701)
T ss_pred EeccCCCCCeEEEecccchhHHHHHHHHhcccccccccccccCCeEEEECCCCHHHHHHHHHhhcccchHHHHHHHHHHH
Confidence 99999999999999999999999999999976432233345689999999999999999887655555667999999999
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHhccCCCcccCCCCCCCCCCCCCCCc-ccCCCCccCC
Q 045760 640 ETALLTSGFSLDDPNTFGNRIHRMLKLGLSIEEDAGDADADMPPLEDAADD-AEGSKMEEVD 700 (700)
Q Consensus 640 d~AlL~~G~~i~dp~~f~~ri~~ll~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 700 (700)
|+|+|++|+.++||+.|++|+|+||..+|+++.++....+..++..+++++ .+++.+++||
T Consensus 640 D~AlL~~G~~leDp~~f~~Ri~~lL~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (701)
T PTZ00272 640 DTSLLTSGFQLEDPTGYAERINRMIKLGLSLDEEEEEAAEAPVAETAPAEVTAGTSSMEQVD 701 (701)
T ss_pred HHHHHhCCCCccCHHHHHHHHHHHHHHhcCCCccccccccccccccCCccccccccccccCC
Confidence 999999999999999999999999987899997755432222223344443 2456777775
|
|
| >KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 700 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-165 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 1e-164 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 1e-148 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 1e-140 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-137 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-136 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 1e-112 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 1e-111 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 1e-111 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 1e-111 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 1e-111 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-106 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 1e-106 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-106 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 1e-99 | ||
| 3k60_A | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 5e-94 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 8e-94 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 2e-93 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 2e-93 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 2e-93 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 2e-93 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 2e-93 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 2e-93 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 2e-93 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 2e-93 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 2e-93 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 2e-93 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 2e-93 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 2e-93 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 2e-93 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 3e-93 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 3e-93 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 3e-93 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 3e-93 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 3e-93 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 4e-93 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 4e-93 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 4e-93 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 4e-93 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 5e-93 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 5e-93 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 6e-93 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 6e-93 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 7e-93 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 7e-93 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 8e-93 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 2e-92 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 2e-92 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 2e-92 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 3e-92 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 5e-92 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 9e-90 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 1e-89 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 3e-86 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 7e-86 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 7e-86 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 3e-83 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 3e-83 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 3e-83 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 4e-83 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 4e-83 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 5e-83 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 5e-83 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 5e-83 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 6e-83 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 6e-83 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 8e-83 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 2e-82 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 3e-82 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 4e-82 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 9e-82 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 2e-72 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 7e-66 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 3e-63 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 3e-63 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 4e-63 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 2e-62 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 2e-60 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 2e-54 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 5e-48 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 4e-46 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
Score = 1025 bits (2652), Expect = 0.0
Identities = 431/676 (63%), Positives = 548/676 (81%), Gaps = 12/676 (1%)
Query: 5 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPEL 64
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++SL+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 65 FIHIIPDKTNNSLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGV 124
FI I P L I DSGIGMTKA+L+NNLGTIA+SGTK FMEAL+AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 125 GFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDQL 184
GFYS +LVA++V V +K NDDEQYIWES AGGSFTVT D E +GRGT + L LK+DQL
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 185 EYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGK---------- 234
EYLEE+R+K++IK+HSEF++YPI L + K EKE+ E+E++ ++++ +
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKP 242
Query: 235 VEDVDEEKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEE 294
+ +E+E+++ K KK+KE E +NK KP+W R P +IT+EEY AFYKS++NDWE+
Sbjct: 243 KLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWED 302
Query: 295 HLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYL 354
L VKHFSVEGQLEF+AILF+PKRAPFDLF+++KK NNIKLYVRRVFI D E+LIPE+L
Sbjct: 303 PLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWL 362
Query: 355 GFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFS 414
FVKG+VDSEDLPLN+SRE LQQNKI+KVIRKN+VKK IE F EIAE+ E + KFY +FS
Sbjct: 363 SFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFS 422
Query: 415 KNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAV 474
KN+KLG+HED+ N+ LA+LLRY+STKS DELTSL DYVTRM E Q +IYYITGES KAV
Sbjct: 423 KNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAV 482
Query: 475 ENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKE 534
E SPFL+ LK K +EVL++ D IDEYA QLKEFEGK LV TK+ +L+E+++EK ++E
Sbjct: 483 EKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAERE 541
Query: 535 TLKEKFEGLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDN 594
+++E L K +K++LGD+VEKVVVS +++D+P + TG++GW+ANMERIMKAQALRD+
Sbjct: 542 KEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDS 601
Query: 595 SMAGYMSSKKTMEINPENPIMEELRKRAD-ADKNDKSVKDLVLLLFETALLTSGFSLDDP 653
SM+ YMSSKKT EI+P++PI++EL+KR D DK+VKDL LL+ETALLTSGFSLD+P
Sbjct: 602 SMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEP 661
Query: 654 NTFGNRIHRMLKLGLS 669
+F +RI+R++ LGL+
Sbjct: 662 TSFASRINRLISLGLN 677
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 700 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 100.0 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.78 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.65 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 99.6 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 99.57 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 99.2 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 99.02 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 98.96 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 98.95 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 98.9 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 98.78 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 98.74 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 98.73 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 98.69 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 98.67 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 98.64 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 98.42 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 98.2 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 98.01 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 97.6 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 97.52 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 97.47 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 97.46 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.45 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.42 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.41 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 97.38 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 97.38 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 97.36 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.36 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 97.33 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 97.32 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 97.31 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 97.31 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 97.26 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 97.23 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 97.22 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 97.0 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 96.95 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 96.94 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 96.87 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 96.67 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 96.58 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 95.36 | |
| 3ke6_A | 399 | Protein RV1364C/MT1410; anti-sigma factor, anti-si | 86.38 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-170 Score=1457.47 Aligned_cols=663 Identities=66% Similarity=1.046 Sum_probs=571.4
Q ss_pred ccccchhhhHHHHHHHHHHcCCCCchhHHHHHHhcHHhHHHhhhhhhccCCCccCCCCCceEEEEEcCCCCEEEEEeCCC
Q 045760 5 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNSLSIIDSGI 84 (700)
Q Consensus 5 ~e~~~Fq~e~~~ll~ll~~~LYs~~~iflRELIqNA~DA~~k~~~~~l~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGi 84 (700)
.|+|+||||+++||+||+++||||+++|||||||||+||++++||+++++++......++.|+|.+++++++|+|.|||+
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 82 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 82 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEECCC
Confidence 48999999999999999999999999999999999999999999999999988777778899999998889999999999
Q ss_pred CCCHHHHHHHHhHhhhcCchhHHHHHhcCCCCccccccccchhheeeecceEEEEEecCCCceEEEEEccCceEEEEeCC
Q 045760 85 GMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDT 164 (700)
Q Consensus 85 GMt~~dl~~~l~tIa~S~~~~f~~~~~~~~~~~~IG~FGIGf~S~F~vadkv~V~Sk~~~~~~~~w~s~~~~~~~i~~~~ 164 (700)
|||++||.++|++||+||+++|+++++.+.+...||||||||||+||||++|+|+|++.++.++.|+++|++.|+|.+++
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~~~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~~~~~~W~s~g~~~~ti~~~~ 162 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDE 162 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCCSSCCCCCCCCTTCTTGGGGGTEEEEEEEEECTTSCEEEEEECSSSEEEEEECC
T ss_pred CCCHHHHHHHHHhHhccccHHHHHhhhcccchhhcCCCCchhHHHhhcCcEEEEEEccCCCceEEEEEcCCceEEEeecC
Confidence 99999999999999999999998887765677899999999999999999999999997777999999999999999853
Q ss_pred CCCCCCCceEEEEEeccchhhhccHHHHHHHHHHHhCCCCcceEEeeecccccccCCchhhhh-----------hhhccC
Q 045760 165 SGELLGRGTKITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEE-----------KKDEEG 233 (700)
Q Consensus 165 ~~~~~~~GT~I~L~lk~~~~e~l~~~~i~~ii~~ys~~l~~PI~l~~~~~~~~~~~~~~~~~~-----------~~~~~~ 233 (700)
.+...++||+|+|+|+++..+|++.++|+++|++||+|++|||+++..++.++++++++++++ ++++.+
T Consensus 163 ~~~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~~~~~~~~ 242 (677)
T 2cg9_A 163 VNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKDEDDKKP 242 (677)
T ss_dssp SSCCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC--------------------------
T ss_pred CCCCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhcccccccccccccccccc
Confidence 234568999999999999999999999999999999999999999755443333322211000 001111
Q ss_pred CccccchHHHHHhhhhccceeeecceeeeccCCCCccCCCCCCCHHHHHHHHHHHhcCccCcccceeeecccceeeEEEE
Q 045760 234 KVEDVDEEKEKEEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAIL 313 (700)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~W~r~~~~i~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~ll 313 (700)
+.+++++++ ++.++++++++...+|+.||+++|||+|+|++||+|||.+|||+++++|++||+|+||++||+++|+|||
T Consensus 243 ~~~~~~~~~-~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~~~~~lL 321 (677)
T 2cg9_A 243 KLEEVDEEE-EKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAIL 321 (677)
T ss_dssp --------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSSCEEEEE
T ss_pred ccccccchh-hhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccceEEEEE
Confidence 122211111 1123345555666789999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCcccCCCCCCceEEEeeeeeccccccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHH
Q 045760 314 FVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCI 393 (700)
Q Consensus 314 yiP~~~p~~~~~~~~~~~~i~Ly~~rv~I~d~~~~llP~~l~Fv~gvVds~dLplnvSRE~lq~~~~l~~i~~~l~~k~~ 393 (700)
|||+++||++|.+.+.++||+||||||||||+|++|||+||+||||||||+|||||||||+||+|++|++||+.|++||+
T Consensus 322 yiP~~ap~d~~~~~~~~~~ikLYv~rVfI~d~~~~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~~~l~kkvl 401 (677)
T 2cg9_A 322 FIPKRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLI 401 (677)
T ss_dssp EECSSCCC---------CCSEEEETTEEEEECSTTTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHHHHHHHHHH
T ss_pred EEcCCCchhhhhhhhccCCeEEEEeeeEeecChhhhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHHHHHHHHHH
Confidence 99999999999754557999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCHHHHHHHHHHHhhhhhcccccChhhHHHHhccccccccCCCCceecHHHHHHhhccCCCcEEEEeCCCHHH
Q 045760 394 ELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKA 473 (700)
Q Consensus 394 ~~l~~l~~d~e~y~~f~~~~~~~lK~G~~~D~~~~~~l~~llrf~ss~~~~~~~sL~eYv~rm~~~q~~IYy~~~~~~~~ 473 (700)
++|.+||+|+++|++||++||.+||+|+++|..||++|++||||+||+++++++||+||++|||++|+.|||++|+|+++
T Consensus 402 ~~l~~la~~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~IyY~t~~s~~~ 481 (677)
T 2cg9_A 402 EAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKA 481 (677)
T ss_dssp HHHHHHHSCSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEEEEEECSCSTT
T ss_pred HHHHHHHhCHHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceEEEEeCCCHHH
Confidence 99999999999999999999999999999999999999999999999876689999999999999999999999999999
Q ss_pred HhcChhHHHHHHcCCEEEEeCCCchHHHHHHHhhccCceeEEecccCCCCCCchhHHhhHHHHHHHHHHHHHHHHHHhCC
Q 045760 474 VENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKKETLKEKFEGLCKVIKDVLGD 553 (700)
Q Consensus 474 ~~~sp~le~~~~kg~eVL~l~dpiDe~~l~~L~~y~gk~f~sV~~~~~~l~~~~e~k~~~~~~~~e~~~L~~~lk~~L~~ 553 (700)
+++|||+|.|++||||||||++|||||||++|.+|+|++|++|+++ ++|++.+++++..+..++++++|++|||++|++
T Consensus 482 ~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~~~~~~~~~~~~~L~~~~k~~L~~ 560 (677)
T 2cg9_A 482 VEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPLTKALKEILGD 560 (677)
T ss_dssp TTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSSTTHHHHHGGGHHHHHHHHHTTCS
T ss_pred HHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhhhhhhhhhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999 988765444444455667899999999999999
Q ss_pred cccEEEEeecCCCCCEEEEeCCCcccHHHHHHHHHHhcccCcccccCCCCceEEeCCCChHHHHHHHhhccC-CCchhHH
Q 045760 554 KVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADAD-KNDKSVK 632 (700)
Q Consensus 554 kV~~V~vS~RL~~sPa~lv~~e~g~s~~Mer~mk~q~~~~~~~~~~~~~k~iLEINp~HplIkkL~~~~~~d-~~~~~~~ 632 (700)
+|.+|++|+||++||||||++++|||++|+|||++|+++++.+.+++..+++|||||+||||++|..+...| .+++.++
T Consensus 561 ~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~~d~~~~~~~~ 640 (677)
T 2cg9_A 561 QVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVK 640 (677)
T ss_dssp SCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHHTCCSSCSSSS
T ss_pred cceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhhccccCHHHHH
Confidence 999999999999999999999999999999999998765544445677899999999999999999876544 3566789
Q ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhccC
Q 045760 633 DLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLS 669 (700)
Q Consensus 633 ~~~~~Lyd~AlL~~G~~i~dp~~f~~ri~~ll~~~l~ 669 (700)
++|++|||+|+|++|++++||+.|++|+|+||.++||
T Consensus 641 ~~~~~Lyd~All~~G~~l~dp~~f~~ri~~ll~~~l~ 677 (677)
T 2cg9_A 641 DLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677 (677)
T ss_dssp TTHHHHHHHHHHHTTCCCSSTTHHHHHHHHTSSSSCC
T ss_pred HHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999987664
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
| >3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 700 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 1e-106 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 3e-72 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 9e-70 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 6e-69 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 2e-33 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 322 bits (826), Expect = e-106
Identities = 182/254 (71%), Positives = 215/254 (84%)
Query: 266 KPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFD 325
KP+W R P +IT+EEY AFYKS++NDWE+ L VKHFSVEGQLEF+AILF+PKRAPFDLF+
Sbjct: 3 KPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE 62
Query: 326 TRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIR 385
++KK NNIKLYVRRVFI D E+LIPE+L FVKG+VDSEDLPLN+SRE LQQNKI+KVIR
Sbjct: 63 SKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 122
Query: 386 KNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHEDSTNKTKLAELLRYHSTKSGDE 445
KN+VKK IE F EIAE+ E + KFY +FSKN+KLG+HED+ N+ LA+LLRY+STKS DE
Sbjct: 123 KNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 182
Query: 446 LTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQL 505
LTSL DYVTRM E Q +IYYITGES K+VE SPFL+ LK K +EVL++ D IDEYA QL
Sbjct: 183 LTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 242
Query: 506 KEFEGKKLVSATKE 519
KEFEGK LV TK+
Sbjct: 243 KEFEGKTLVDITKD 256
|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 700 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 99.98 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 99.54 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 99.45 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 99.36 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 98.16 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 98.09 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 97.87 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.79 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.79 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 97.6 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 97.57 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.44 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 97.41 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 97.37 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 97.23 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 96.37 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 95.96 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 95.78 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-85 Score=673.74 Aligned_cols=255 Identities=71% Similarity=1.143 Sum_probs=240.3
Q ss_pred CCCCccCCCCCCCHHHHHHHHHHHhcCccCcccceeeecccceeeEEEEEecCCCCCCcccCCCCCCceEEEeeeeeccc
Q 045760 265 QKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMD 344 (700)
Q Consensus 265 ~~~~W~r~~~~i~~eey~~fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~i~Ly~~rv~I~d 344 (700)
.+|||+|+|++||+|||++||++++++|++||+|+|+++||+++|+||||||+++|+++|+....++||+||||||||+|
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~~~~~~~ikLY~~rVfI~d 81 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESKKKKNNIKLYVRRVFITD 81 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC----CCEEEEETTEEEES
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhhhhhcCCeEEEEEeeeecc
Confidence 58999999999999999999999999999999999999999999999999999999999976555789999999999999
Q ss_pred cccccccccccceeeeecCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhhhhhcccccC
Q 045760 345 NCEELIPEYLGFVKGIVDSEDLPLNISRETLQQNKILKVIRKNLVKKCIELFQEIAENKEDYNKFYESFSKNLKLGIHED 424 (700)
Q Consensus 345 ~~~~llP~~l~Fv~gvVds~dLplnvSRE~lq~~~~l~~i~~~l~~k~~~~l~~l~~d~e~y~~f~~~~~~~lK~G~~~D 424 (700)
+|++|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|+++++|+++|.+||++||.+||+||++|
T Consensus 82 ~~~~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~~d~eky~~fw~~fg~~lK~G~~~D 161 (256)
T d1usua_ 82 EAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHED 161 (256)
T ss_dssp CCTTSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chhhHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhhhCHHHHHHHHHHHhHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred hhhHHHHhccccccccCCCCceecHHHHHHhhccCCCcEEEEeCCCHHHHhcChhHHHHHHcCCEEEEeCCCchHHHHHH
Q 045760 425 STNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQ 504 (700)
Q Consensus 425 ~~~~~~l~~llrf~ss~~~~~~~sL~eYv~rm~~~q~~IYy~~~~~~~~~~~sp~le~~~~kg~eVL~l~dpiDe~~l~~ 504 (700)
..|++++++||||+||.+.++++||+||++||+++|+.|||++|++++.+++|||+|+|++||+|||+|+|||||||+++
T Consensus 162 ~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe~~i~~ 241 (256)
T d1usua_ 162 TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQ 241 (256)
T ss_dssp TTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHHHHHHH
Confidence 99999999999999998777899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCceeEEeccc
Q 045760 505 LKEFEGKKLVSATKE 519 (700)
Q Consensus 505 L~~y~gk~f~sV~~~ 519 (700)
|++|+|++|+||+++
T Consensus 242 l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 242 LKEFEGKTLVDITKD 256 (256)
T ss_dssp HCEETTEEEEETTCC
T ss_pred HHHhCCCceeecCCC
Confidence 999999999999874
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|