Citrus Sinensis ID: 045773

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300---
Protein Sequence
MKMEQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIADVRG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccEEccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccEEEEEEcccccccccEEEEEEEEEcccccccEEEEcccccccEEEEEEEccccEEEEEEEEcccccccEEEEEEEEEcccccccccHHHHHHHccccccccEEEEEEcccEEEEEccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccccccccccEEEcccccccccccccEEEEcccccccccccccccEEccEcccccccccccccccccccccccEEEHHHcccccEEEcccccccccccccccHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccccHHHccHHHHHHHHHHHHcccEEEEEEccccccccEEEEEEEEEccccccccEEEEccccccEEEEEEEcccccEEEEEEEEcccccccEEEEEEEEEcccccccccccEEEEEcccccccEEEEEcccccEEEEEccccc
Coil and Loop (DISEMBL)
mkmeqcpsasygtsmsarphdftrygqnakghqnqidfktyGSAYTKFKDyaksgvtfanytegtpvpkpssgssvnrwvepgkffresmlkngtlmpmpdirdrmprrsllprsivsnlpftssklNQLKEIfhasdnstMESIIKDALSdcerapskgetkrcvgsAEDMIDFATSVlgnnvalhttenakgskqdimigtvkginggevtksvschqslypyllyychsvpevrvyeadilepktmakINHGVaichldtsswsaTHEAFLTlgsspgrieVCHWIFENdltwtiadvrg
Flexible Loop (DISEMBL)
mkmeqcpsasygtsmsarpHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTfanytegtpvpkpssgssvnrWVEPGKFfresmlkngtlmpmpdirdRMPRRSLLPRSIVsnlpftssklnQLKEIFHASDNSTMESIIKDALsdcerapskgeTKRCVGSAEDMIDFATSVLGNNVALHTtenakgskqdiMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENdltwtiadvrg
Low Complexity Region (SEG)
MKMEQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLmpmpdirdrmprrSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIADVRG
Disordered region (IsUnstruct)
*********************************NQIDFKTYGSAYTKFKDYAKSGVTFANYT*******************************************************************************************************VGSAEDMIDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD***
Disordered Region (DISOPRED)
******P*********************************YGSAY**********************************VEPGKFFRESMLKNGTLMPMPDIRD*******LPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCER**********VGSAEDMIDFATSVLGNNVAL****************TVKGI*GGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIADV**
Disordered Region (DISEMBL)
**************MSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGT**********VNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCE***********VGSAEDMIDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIADVRG
Disordered Region (DISPRO)
*KMEQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTP*******SSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKMEQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIADVRG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	303	2.2.26 [Sep-21-2011]
P92982	622	Probable polygalacturonas	yes	no	0.960	0.467	0.647	1e-115
P92990	626	Probable polygalacturonas	no	no	0.970	0.469	0.637	1e-114
Q40161	630	Polygalacturonase-1 non-c	N/A	no	0.950	0.457	0.659	1e-113
P93218	632	Polygalacturonase non-cat	N/A	no	0.950	0.455	0.639	1e-111
P93217	629	Polygalacturonase non-cat	N/A	no	0.950	0.457	0.636	1e-111
O80760	624	Probable polygalacturonas	no	no	0.957	0.464	0.616	1e-109
Q6ZA27	627	BURP domain-containing pr	yes	no	0.947	0.457	0.506	4e-86
Q6K2M1	690	BURP domain-containing pr	no	no	0.947	0.415	0.484	2e-78
Q7XES5	344	BURP domain-containing pr	no	no	0.729	0.642	0.526	3e-69
Q942D4	429	BURP domain-containing pr	no	no	0.679	0.480	0.330	2e-26

>sp|P92982|JP630_ARATH Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2

 Score =  416 bits (1069), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 193/298 (64%), Positives = 236/298 (79%), Gaps = 7/298 (2%)

Query: 3   MEQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYT 62
            E+    +YG S++     F+ YG+ A+G  N+IDFKTY +  + FKDY K+GV FA Y 
Sbjct: 332 FEKVDFVNYGKSINPGSESFSGYGKGAEG--NKIDFKTY-TQNSTFKDYTKTGVEFAKYN 388

Query: 63  EGTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPF 122
             +       G +VN+WVEPGKFFRESMLK GTL+ MPDI+D+MP+RS LPRSIVS LPF
Sbjct: 389 RSSL----GGGKTVNKWVEPGKFFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPF 444

Query: 123 TSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGN 182
           ++SK+ ++K +FHA+DNSTME II DA+ +CER P+  ETKRCVGSAEDMIDFATSVLG 
Sbjct: 445 STSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGR 504

Query: 183 NVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEAD 242
           +V L TTE+  GSK+ +MIG V GINGG VTKSVSCHQSLYPYLLYYCHSVP+VRVYE+D
Sbjct: 505 SVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESD 564

Query: 243 ILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           +L+PK+ AKINHG+AICH+DTS+W A H AF+ LGS PG+IEVCHWIFEND+ W IAD
Sbjct: 565 LLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622

Non-catalytic subunit of polygalacturonase.
Arabidopsis thaliana (taxid: 3702)

>sp|P92990|JP650_ARATH Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2

 Score =  410 bits (1054), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 190/298 (63%), Positives = 232/298 (77%), Gaps = 4/298 (1%)

Query: 4   EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTE 63
           E+    +YG S +     FT YG+ A+G  +++ FKTY +  + FKDYAK GV FA Y  
Sbjct: 332 EKVNFVNYGQSFNPGSETFTGYGKGAEG--SKLSFKTY-TPNSTFKDYAKKGVAFAKYNV 388

Query: 64  GTPVPKP-SSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPF 122
            T        G +VN+W+EPGKFFRES LK GT++PMPDI+D+MP+RS LPRSI++ LPF
Sbjct: 389 STTTANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPF 448

Query: 123 TSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGN 182
           ++SKL ++K IFHA +NSTM  II DA+++CER PS GETKRCVGSAEDMIDFATSVLG 
Sbjct: 449 STSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGR 508

Query: 183 NVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEAD 242
           +V L TTEN  GSK+ ++IG V GINGG++TK+VSCHQSLYPYLLYYCHSVP+VRVYEAD
Sbjct: 509 SVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEAD 568

Query: 243 ILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           +LE  +  KINHG+AICH+DTSSW  +H AFL LGS PGRIEVCHWIFEND+ W IAD
Sbjct: 569 LLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626

Non-catalytic subunit of polygalacturonase.

Arabidopsis thaliana (taxid: 3702)

>sp|Q40161|GP1_SOLLC Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1

 Score =  408 bits (1048), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/297 (65%), Positives = 232/297 (78%), Gaps = 9/297 (3%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTP--- 66
           +YG S +     FT YG+   G+   I+FKTYG   T FKDY K   TF+NY   T    
Sbjct: 337 NYGQSFNEGTDVFTTYGKG--GNDPHINFKTYGVNNT-FKDYVKDTATFSNYHNKTSQVL 393

Query: 67  --VPKPSSGSSVN-RWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFT 123
             + + + G  VN RWVEPGKFFRE MLK+GT+MPMPDI+D+MP+RS LPR I S LPF+
Sbjct: 394 ASLMEVNGGKKVNNRWVEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRVIASKLPFS 453

Query: 124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
           +SK+ +LK+IFHA D S +E +I DALS+CERAPS GETKRCV SAEDMIDFATSVLG N
Sbjct: 454 TSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRN 513

Query: 184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
           V + TTE+ KGS  +IMIG+VKGINGG+VTKSVSCHQ+LYPYLLYYCHSVP+VRVYEADI
Sbjct: 514 VVVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVYEADI 573

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           L+P +  KINHGVAICH+DTSSW  +H AF+ LGS PG+IEVCHWIFEND+TW IAD
Sbjct: 574 LDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHWIFENDMTWAIAD 630

Non-catalytic subunit of the polygalacturonase isozyme 1 (PG1). Necessary and sufficient to convert the polygalacturonase from its monomeric form PG2 to its heterodimeric form PG1. Seems to limit the depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening, probably by recruiting PG2 to form PG1.

Solanum lycopersicum (taxid: 4081)

>sp|P93218|GP3_SOLLC Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1

 Score =  401 bits (1030), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 190/297 (63%), Positives = 233/297 (78%), Gaps = 9/297 (3%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTP--- 66
           +YG S +     FT YG+   G+   I+FKTYG   T FKDY K   TF+NY   T    
Sbjct: 339 NYGQSFNEGTDVFTTYGKG--GNDPHINFKTYGVNNT-FKDYVKDTATFSNYHNKTSQDL 395

Query: 67  --VPKPSSGSSVN-RWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFT 123
             + + + G  VN RW+EPGKFFRE MLK+GT+MPMPDI+D+MP+RS LPR+I + LPF+
Sbjct: 396 ASLSEVNGGKKVNNRWIEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFS 455

Query: 124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
           +SK+++LK+IFHA+++S +  +I DALS+CERAPS GETK+CV SAEDMIDFATSVLG N
Sbjct: 456 TSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRN 515

Query: 184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
           V + TTEN  GSK +IMIG++KGINGG+VTKSVSCHQ+LYP LLYYCHSVP+VRVYEADI
Sbjct: 516 VVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADI 575

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           L+P + AKINHGVAICH+DTSSW   H AF+ LGS PG+IEVCHWIFEND+TW  AD
Sbjct: 576 LDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHWIFENDMTWATAD 632

Non-catalytic subunit of polygalacturonase.

Solanum lycopersicum (taxid: 4081)

>sp|P93217|GP2_SOLLC Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1

 Score =  400 bits (1027), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/297 (63%), Positives = 232/297 (78%), Gaps = 9/297 (3%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTP--- 66
           +YG S +     F  YG+   G+   I+FKTYG   T FKDY K   TF+NY   T    
Sbjct: 336 NYGQSFNEGTDVFITYGKG--GNDPHINFKTYGVNNT-FKDYVKDTATFSNYHNKTSQDL 392

Query: 67  --VPKPSSGSSVN-RWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFT 123
             + + + G  VN RW+EPGKFFRE MLK+GT+MPMPDI+D+MP+RS LPR+I + LPF+
Sbjct: 393 ASLSEVNGGKKVNNRWIEPGKFFREKMLKSGTIMPMPDIKDKMPKRSFLPRAIAAKLPFS 452

Query: 124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
           +SK+++LK+IFHA+++S +  +I DALS+CERAPS GETK+CV SAEDMIDFATSVLG N
Sbjct: 453 TSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRN 512

Query: 184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
           V + TTEN  GSK +IMIG++KGINGG+VTKSVSCHQ+LYP LLYYCHSVP+VRVYEADI
Sbjct: 513 VVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVYEADI 572

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           L+P + AKINHGVAICH+DTSSW   H AF+ LGS PG+IEVCHWIFEND+TW  AD
Sbjct: 573 LDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHWIFENDMTWATAD 629

Non-catalytic subunit of polygalacturonase.

Solanum lycopersicum (taxid: 4081)

>sp|O80760|Y639_ARATH Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 183/297 (61%), Positives = 225/297 (75%), Gaps = 7/297 (2%)

Query: 4   EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTE 63
           E+    +YG S +    +FT YGQ+  G    + FKTYG   + FK Y K GV FA Y+ 
Sbjct: 335 EKVNFVNYGKSFNLGSDNFTGYGQDNVG--GNVSFKTYGQGQS-FKVYTKDGVVFARYSN 391

Query: 64  GTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFT 123
                  S+G +VN+WVE GKFFRE+MLK GTLM MPDI+D+MP+R+ LPR+IV NLPF+
Sbjct: 392 NVS----SNGKTVNKWVEEGKFFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFS 447

Query: 124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
           SS + ++  +F A +NS+M  II  A+S+CER  S GETKRCVGSAEDMIDFATSVLG  
Sbjct: 448 SSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRG 507

Query: 184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
           V + TTEN  GSK+ ++IG V GINGG+VT++VSCHQSLYPYLLYYCHSVP VRVYE D+
Sbjct: 508 VVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDL 567

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           L+PK++ KINHGVAICH+DTS+WS +H AFL LGS PG+IEVCHWIFEND+TW I D
Sbjct: 568 LDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624

Non-catalytic subunit of polygalacturonase.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZA27|BURPC_ORYSJ BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1

 Score =  318 bits (814), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 152/300 (50%), Positives = 197/300 (65%), Gaps = 13/300 (4%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPK 69
           +YG S +     F  YG+ +  +   I FK Y  +   FK YAKSGV F  Y   +    
Sbjct: 332 NYGGSFNPGTVTFKGYGEGSNPNH-HIGFKEYAGSNNSFKGYAKSGVDFKEYHNTSSADA 390

Query: 70  P--------SSGSSVNRWV-EPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNL 120
                    SSG    +W  EPGKFFRE+ L +G  MPMPDI+D+MP R+ LPR I   +
Sbjct: 391 ATTMSLEAVSSGHQHLKWSPEPGKFFRETELVSGNTMPMPDIKDKMPPRAFLPRDIAKKI 450

Query: 121 PFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVL 180
           PF   K N + E+F    ++ M   +   +++CERAPS+GETKRC  SAED++DFA  +L
Sbjct: 451 PF---KPNAVSEVFGVPLDTAMGKAVTSTVAECERAPSRGETKRCATSAEDIVDFAVEML 507

Query: 181 GNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYE 240
           GN++ + +T +  GS   I +G V G++GG+VT+SVSCHQSL+PYL+YYCHSVP+VRVYE
Sbjct: 508 GNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVYE 567

Query: 241 ADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           ADI+   +  KINHGVAICHLDTS WS TH AF+ LG  PG +EVCHWIFE D+TWT+AD
Sbjct: 568 ADIMAADSDQKINHGVAICHLDTSDWSPTHGAFIALGGKPGEVEVCHWIFEGDMTWTVAD 627

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q6K2M1|BURPE_ORYSJ BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=2

 Score =  292 bits (748), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/297 (48%), Positives = 187/297 (62%), Gaps = 10/297 (3%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPK 69
           SYG S++     F  YG  +  +  +I F  Y    T FK Y+  GV F  Y   + +  
Sbjct: 398 SYGKSVNPGSVTFKGYGLGSNPNH-RIGFARYSGDNTTFKAYSNDGVEFKEYQNMSKMEV 456

Query: 70  PSSGSSVNR----WV-EPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTS 124
               ++  R    W  EPGKFFRE  L  G  MPMPDI DR P R+ LPR I + +PF +
Sbjct: 457 SKIEAAARRPPLRWSPEPGKFFRERDLVAGNRMPMPDIADRTPPRAFLPRDIAAKIPFDA 516

Query: 125 SKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNV 184
           + ++ L   F A+  + M  ++   +++C R PS+GETKRC  SAED++DFA  +LG+NV
Sbjct: 517 AAVSAL---FGAAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNV 573

Query: 185 ALHTTENAKGSKQDIMIGTVKGI-NGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
               TE+  G   D+ +G V G+  GG VT+SVSCHQSL+PYL+YYCHSVP VRVYEADI
Sbjct: 574 VARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEADI 633

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           L   +  KINHGVAICHLDTS WS  H AF+ LG  PG +EVCHWIF+ D+TWT+A+
Sbjct: 634 LAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPGEMEVCHWIFQGDMTWTVAN 690

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XES5|BURPG_ORYSJ BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1

 Score =  261 bits (668), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 119/226 (52%), Positives = 161/226 (71%), Gaps = 5/226 (2%)

Query: 77  NRWVEPGKFFRESMLKNGTLMPMPDIRDRM--PRRSLLPRSIVSNLPFTSSKLNQLKEIF 134
           N  ++PG FFRE  LK G ++ MPDI + +   R S LPRSI   +PF   K   +K +F
Sbjct: 120 NITIKPGIFFREQELKEGNVVRMPDIANELTTARSSFLPRSIADRIPF---KAEAVKSLF 176

Query: 135 HASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVALHTTENAKG 194
               N+T+   + + ++ C+ +PSKGETKRCV SAEDMIDFA ++LG+++ + +T    G
Sbjct: 177 GLEPNTTLAKAVDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDIVVRSTVLPNG 236

Query: 195 SKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINH 254
             + IMIG VKGINGG++T SVSCH+ L+PY++YYCHSVP++RVYEA+IL  +T  KIN 
Sbjct: 237 PGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEAEILSVQTKEKINS 296

Query: 255 GVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           GVAICH+DTS+W+A H AF+ LG  PG+ +VCHWIF   +TW IAD
Sbjct: 297 GVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHWIFNGSMTWVIAD 342

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q942D4|BURP3_ORYSJ BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 105/221 (47%), Gaps = 15/221 (6%)

Query: 85  FFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMES 144
           FF E  L  G  M +            LPRS    +PF+S K+ ++   F     S   +
Sbjct: 213 FFLEKDLHPGKTMAV-HFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAA 271

Query: 145 IIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN--VALHTTENAKGS-KQDIMI 201
            +   L DCE  P++GE K C  S E M+DFATS LG +   A  T    +GS +Q+  +
Sbjct: 272 EMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTV 331

Query: 202 GTVK-GINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKIN----HGV 256
             VK    GG+  + V+CH   Y Y ++ CH     R Y        +MA  +      V
Sbjct: 332 TAVKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAV------SMAGRDGTGVEAV 385

Query: 257 AICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWT 297
           A+CH DT+ W+  H AF  L   PG + VCH++ ++ + WT
Sbjct: 386 AVCHADTAGWNPKHVAFQVLKVKPGTVPVCHFLPQDHVVWT 426

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
224100181	598	predicted protein [Populus trichocarpa]	0.970	0.491	0.693	1e-120
225425509	624	PREDICTED: probable polygalacturonase no	0.953	0.463	0.684	1e-119
225425505	633	PREDICTED: probable polygalacturonase no	0.950	0.454	0.683	1e-118
255568824	631	Polygalacturonase-1 non-catalytic subuni	0.950	0.456	0.690	1e-118
449533308	612	PREDICTED: probable polygalacturonase no	0.953	0.472	0.659	1e-115
449450462	623	PREDICTED: probable polygalacturonase no	0.953	0.463	0.659	1e-115
224107839	615	predicted protein [Populus trichocarpa]	0.953	0.469	0.681	1e-115
297845426	623	hypothetical protein ARALYDRAFT_472637 [	0.960	0.467	0.644	1e-115
356526811	627	PREDICTED: probable polygalacturonase no	0.957	0.462	0.655	1e-115
297841779	626	hypothetical protein ARALYDRAFT_894840 [	0.970	0.469	0.647	1e-114

>gi|224100181|ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1| predicted protein [Populus trichocarpa]

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/303 (69%), Positives = 244/303 (80%), Gaps = 9/303 (2%)

Query: 4   EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYA-KSGVTFANYT 62
           E+   A+YG S +     F+ YG  A G Q  I FK YG   T FKDYA K GVTFA YT
Sbjct: 299 EKANFANYGKSFNEGTDKFSGYGNGAMGQQ--IGFKIYG-VNTTFKDYANKKGVTFAGYT 355

Query: 63  EGTPVP---KPSSGSSV--NRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIV 117
             +      K +S S V  N+W+EPGKFFRESMLK G++MPMPDIRD+MP+RS LPRSI+
Sbjct: 356 SASTADASMKVNSDSVVKNNKWIEPGKFFRESMLKKGSVMPMPDIRDKMPKRSFLPRSII 415

Query: 118 SNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFAT 177
           S LPF++SK++QLKEIFHASDNS+ME II DAL +CER+PS GETKRC GSAEDMIDFAT
Sbjct: 416 SKLPFSTSKIDQLKEIFHASDNSSMERIILDALEECERSPSPGETKRCAGSAEDMIDFAT 475

Query: 178 SVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVR 237
           SVLG NVA+ TT+N  GSK++IMIG++KGINGG VT+SVSCHQ+LYPYLLYYCHSVP+VR
Sbjct: 476 SVLGRNVAVRTTDNVNGSKKNIMIGSIKGINGGRVTRSVSCHQTLYPYLLYYCHSVPKVR 535

Query: 238 VYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWT 297
           VYEAD+L+P + A INHGVAICHLDTSSWS TH AFL LGS PGRIEVCHWIFEND+TWT
Sbjct: 536 VYEADLLDPNSKATINHGVAICHLDTSSWSPTHGAFLALGSGPGRIEVCHWIFENDMTWT 595

Query: 298 IAD 300
           IA+
Sbjct: 596 IAE 598

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425509|ref|XP_002266815.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like [Vitis vinifera]

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/295 (68%), Positives = 241/295 (81%), Gaps = 6/295 (2%)

Query: 9   ASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEG---T 65
           A+YG S +     FT YG+ A GH+  I FK YG   T F DYAK G++F+ YT     T
Sbjct: 333 ANYGQSFNEGTDTFTGYGKGATGHK--IGFKFYGVNNT-FTDYAKKGISFSRYTNKSSET 389

Query: 66  PVPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSS 125
            +   ++GSSVNRW+EPGKFFRESMLK GT+MPMPDIRD+MP+RS LPRSI S LPF++S
Sbjct: 390 MISTAANGSSVNRWIEPGKFFRESMLKKGTVMPMPDIRDKMPKRSFLPRSISSKLPFSTS 449

Query: 126 KLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVA 185
           KL ++K+IFHA+DNS+ME +  +AL DCERAPSKGET+RCV S EDMIDFAT+VLG NV 
Sbjct: 450 KLEEMKKIFHAADNSSMEHMFTEALDDCERAPSKGETRRCVPSIEDMIDFATTVLGRNVV 509

Query: 186 LHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILE 245
           + TT++ +GSKQ++MIG+VKGINGG+VTKSVSCHQSL+PYLLYYCH VP+VRVYEAD+L+
Sbjct: 510 VRTTQSVEGSKQNVMIGSVKGINGGQVTKSVSCHQSLFPYLLYYCHFVPKVRVYEADLLD 569

Query: 246 PKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           PKT A INHGVAICHLDTS WSA H AF+ LGS PGRIEVCHWIFEND+TWTI D
Sbjct: 570 PKTKANINHGVAICHLDTSDWSAGHGAFVALGSGPGRIEVCHWIFENDMTWTIVD 624

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425505|ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP630-like [Vitis vinifera]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 201/294 (68%), Positives = 239/294 (81%), Gaps = 6/294 (2%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPK 69
           +YG S +     F  YG+ A  H+  I+FK YG   T F DYAK G++F+ YT  +    
Sbjct: 343 NYGKSFNEGTDTFAGYGKGATNHK--INFKIYGVNNT-FTDYAKKGISFSRYTNKSSETM 399

Query: 70  PS---SGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSK 126
            S   SGSSVNRWVEPGKFFRESMLK GT+MPMPDIRD+MP+RS LPR+I S  PF++SK
Sbjct: 400 TSMAVSGSSVNRWVEPGKFFRESMLKKGTVMPMPDIRDKMPKRSFLPRTISSKFPFSTSK 459

Query: 127 LNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVAL 186
           L ++K+IFHA+DNS+ME +  +AL DCERAPSKGETKRCV S EDMIDFAT+VLG NV +
Sbjct: 460 LEEMKKIFHAADNSSMEHMFTEALDDCERAPSKGETKRCVPSIEDMIDFATTVLGRNVVV 519

Query: 187 HTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEP 246
            TT++ +GSKQ++MIG+VKGINGG+VTKSVSCHQSL+PYLLYYCHSVP+VRVYEAD+L+P
Sbjct: 520 RTTQSVEGSKQNLMIGSVKGINGGQVTKSVSCHQSLFPYLLYYCHSVPKVRVYEADLLDP 579

Query: 247 KTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           KT A +NHGVAICHLDTS WSA H AF+ LGS PGRIEVCHWIFEND+TWTIAD
Sbjct: 580 KTKANVNHGVAICHLDTSDWSAGHGAFVALGSGPGRIEVCHWIFENDMTWTIAD 633

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568824|ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative [Ricinus communis] gi|223535346|gb|EEF37021.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative [Ricinus communis]

 Score =  429 bits (1104), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 205/297 (69%), Positives = 235/297 (79%), Gaps = 9/297 (3%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTPVPK 69
           +YG S +     F  YGQ A  H+  I FK YG   T FK+YAK GV+FA YT  T  P 
Sbjct: 338 NYGKSFNEGTDTFKGYGQGANAHK--IGFKMYGVNNT-FKEYAKLGVSFAKYTNITATPS 394

Query: 70  P------SSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFT 123
                  +SGS VNRWVEPGKFFRES LK GT+MPMPDIRD+MP+RS LPRSI S LPF+
Sbjct: 395 AETTAMKASGSLVNRWVEPGKFFRESKLKKGTVMPMPDIRDKMPKRSFLPRSITSKLPFS 454

Query: 124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
           +S   QLK+ FHA DNSTME+++ DAL++CERAPS GETKRC+GSAED+IDFATSVLG N
Sbjct: 455 TSNFAQLKQTFHAFDNSTMETLMLDALTECERAPSPGETKRCIGSAEDLIDFATSVLGRN 514

Query: 184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
           V   TT N  GSK++I IG++KGINGG+VT+SVSCHQSLYPYLLYYCHSVP+VRVYEADI
Sbjct: 515 VVARTTANVNGSKKNIKIGSIKGINGGKVTESVSCHQSLYPYLLYYCHSVPKVRVYEADI 574

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           L+P + +KINHGVAICHLDTSSWS TH AF+ LGS PGRIEVCHWIFENDLTWT AD
Sbjct: 575 LDPNSNSKINHGVAICHLDTSSWSPTHGAFVALGSGPGRIEVCHWIFENDLTWTTAD 631

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449533308|ref|XP_004173618.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like, partial [Cucumis sativus]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/294 (65%), Positives = 232/294 (78%), Gaps = 5/294 (1%)

Query: 9   ASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTP-- 66
           ASYG S +     F+ YGQN  G    + FKTYG   T FKDYAK G+ FA Y+  +   
Sbjct: 322 ASYGKSFNEGTDKFSGYGQNGNGQS--VGFKTYG-VNTTFKDYAKQGINFAKYSNVSSGG 378

Query: 67  VPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSK 126
                SGS   RWVEPGKFFRESML+ G++M MPDIRD+MP+RS LPRSI+S LPF+SSK
Sbjct: 379 AKMSVSGSLAKRWVEPGKFFRESMLRKGSVMAMPDIRDKMPKRSFLPRSILSKLPFSSSK 438

Query: 127 LNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVAL 186
           L  +K+IFHA DNS+ME+++ + + +CER PS GETKRCVGS EDMIDFATSVLG NV +
Sbjct: 439 LGVMKQIFHAGDNSSMETMMTETVRECERLPSAGETKRCVGSVEDMIDFATSVLGRNVVV 498

Query: 187 HTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEP 246
            TTEN KGSK +IMIG VKG+NGG+VT+SVSCHQSL+PYLLYYCHSVP+VRVYE D+L+P
Sbjct: 499 QTTENTKGSKGNIMIGKVKGMNGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEVDLLDP 558

Query: 247 KTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
            T A +NHGVAICHLDTS+WS  H AF+ LGS+PGR+EVCHWIFEND+TWT+AD
Sbjct: 559 ATKATVNHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWTVAD 612

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450462|ref|XP_004142981.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like [Cucumis sativus]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/294 (65%), Positives = 232/294 (78%), Gaps = 5/294 (1%)

Query: 9   ASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTEGTP-- 66
           ASYG S +     F+ YGQN  G    + FKTYG   T FKDYAK G+ FA Y+  +   
Sbjct: 333 ASYGKSFNEGTDKFSGYGQNGNGQS--VGFKTYG-VNTTFKDYAKQGINFAKYSNVSSGG 389

Query: 67  VPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFTSSK 126
                SGS   RWVEPGKFFRESML+ G++M MPDIRD+MP+RS LPRSI+S LPF+SSK
Sbjct: 390 AKMSVSGSLAKRWVEPGKFFRESMLRKGSVMAMPDIRDKMPKRSFLPRSILSKLPFSSSK 449

Query: 127 LNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNNVAL 186
           L  +K+IFHA DNS+ME+++ + + +CER PS GETKRCVGS EDMIDFATSVLG NV +
Sbjct: 450 LGVMKQIFHAGDNSSMETMMTETVRECERLPSAGETKRCVGSVEDMIDFATSVLGRNVVV 509

Query: 187 HTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEP 246
            TTEN KGSK +IMIG VKG+NGG+VT+SVSCHQSL+PYLLYYCHSVP+VRVYE D+L+P
Sbjct: 510 QTTENTKGSKGNIMIGKVKGMNGGKVTESVSCHQSLFPYLLYYCHSVPKVRVYEVDLLDP 569

Query: 247 KTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
            T A +NHGVAICHLDTS+WS  H AF+ LGS+PGR+EVCHWIFEND+TWT+AD
Sbjct: 570 ATKATVNHGVAICHLDTSAWSPAHGAFIALGSAPGRVEVCHWIFENDMTWTVAD 623

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224107839|ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1| predicted protein [Populus trichocarpa]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/298 (68%), Positives = 236/298 (79%), Gaps = 9/298 (3%)

Query: 10  SYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYA-KSGVTFANYTEGTPVP 68
           +YG S +     FT YG+ A G Q  I FK YG   T FKDYA K  VTF+ YT      
Sbjct: 320 NYGKSFNEGTDKFTGYGKGAVGQQ--IGFKIYG-VNTTFKDYARKKDVTFSKYTNAGTAD 376

Query: 69  ---KPSSGSSVNR--WVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPFT 123
              K +S SS N+  WVEPGKFFRESMLK G+ MPMPDIRD+MP+RS LPRSI+S +PF+
Sbjct: 377 ASMKVTSDSSANKNKWVEPGKFFRESMLKEGSEMPMPDIRDKMPKRSFLPRSIISKIPFS 436

Query: 124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
           +SK+  +KEIFHASDNS+ME II DA+ +CERAPS GETKRCVGSAED+IDF  SVLG N
Sbjct: 437 TSKMGLIKEIFHASDNSSMERIILDAVEECERAPSPGETKRCVGSAEDLIDFVISVLGRN 496

Query: 184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
           VA+ TT+N +GSK+++ IGT+KGINGG VTKSVSCHQSLYPYLLYYCHSVP+VRVYEAD+
Sbjct: 497 VAVRTTDNVEGSKKNVTIGTIKGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYEADL 556

Query: 244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIADV 301
           L+P +  KINHGVAICHLDTSSWS TH AFL LGS PGRIEVCHWIFEND+TWT+A+ 
Sbjct: 557 LDPNSKTKINHGVAICHLDTSSWSPTHGAFLALGSGPGRIEVCHWIFENDMTWTLAEA 614

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297845426|ref|XP_002890594.1| hypothetical protein ARALYDRAFT_472637 [Arabidopsis lyrata subsp. lyrata] gi|297336436|gb|EFH66853.1| hypothetical protein ARALYDRAFT_472637 [Arabidopsis lyrata subsp. lyrata]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 192/298 (64%), Positives = 239/298 (80%), Gaps = 7/298 (2%)

Query: 3   MEQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYT 62
            E+    +YG S++     FT YG+ A+G  N+I FKTY +  + FKDYAK+GV FA Y 
Sbjct: 333 FEKVDFVNYGKSINPGSESFTGYGKGAEG--NKIGFKTY-TQNSTFKDYAKTGVEFAKYN 389

Query: 63  EGTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPF 122
           +     +   G +VN+WVEPGKFFRES+LK  +L+ MPDI+D+MP+RS LPR+IVS LPF
Sbjct: 390 Q----SRLGGGKTVNKWVEPGKFFRESLLKESSLIWMPDIKDKMPKRSFLPRNIVSKLPF 445

Query: 123 TSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGN 182
           ++SK+ ++K +FHA DNSTM  II DA+++CER+P+ GETKRCVGSAEDMIDFATSVLG 
Sbjct: 446 STSKIAEIKRVFHAKDNSTMAGIITDAVTECERSPTIGETKRCVGSAEDMIDFATSVLGR 505

Query: 183 NVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEAD 242
           NV L TTE+  GSKQ +MIG VKGINGG VTKSVSCHQSLYPYLLYYCHSVP+VR+YE+D
Sbjct: 506 NVVLRTTESVAGSKQKVMIGKVKGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRIYESD 565

Query: 243 ILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           +L+PK+ AKINHG+AICH+DTS+W A H AF++LGS PG+IEVCHWIFEND+ W IAD
Sbjct: 566 LLDPKSKAKINHGIAICHMDTSAWGANHGAFMSLGSRPGQIEVCHWIFENDMNWAIAD 623

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356526811|ref|XP_003532010.1| PREDICTED: probable polygalacturonase non-catalytic subunit JP650-like [Glycine max]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/308 (65%), Positives = 244/308 (79%), Gaps = 18/308 (5%)

Query: 10  SYGTSMSARPHDFTRYGQN-----------AKGHQN-QIDFKTYGSAYTK--FKDYAKSG 55
           SY  S S    DF  YG +           AKG ++ ++ F TY SAYT   FKDYAK G
Sbjct: 321 SYAKSTSGSEADFKSYGNSFNPGSDTFKGYAKGAEDSKVGFTTY-SAYTNATFKDYAKQG 379

Query: 56  VTFANYTEG-TP--VPKPSSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLL 112
           V+FA+Y    +P    K  SGS V RWVEPGKFFRESMLK+GTLMPMPDIRD+MP+RS L
Sbjct: 380 VSFASYNVSFSPGRASKTVSGSLVKRWVEPGKFFRESMLKDGTLMPMPDIRDKMPKRSFL 439

Query: 113 PRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDM 172
           PRSI++ LPF+SSK+++LK +F  SDNS+ME +I D+L +CER PS GETKRCVGS EDM
Sbjct: 440 PRSILTKLPFSSSKVHELKRLFKVSDNSSMEKMIMDSLGECERVPSMGETKRCVGSIEDM 499

Query: 173 IDFATSVLGNNVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHS 232
           IDF+TSVLG NVA+ TTEN  GS +++M+G VKG+NGG+VT+SVSCHQSL+PY+LYYCHS
Sbjct: 500 IDFSTSVLGRNVAVWTTENVNGSNKNVMVGRVKGMNGGKVTQSVSCHQSLFPYMLYYCHS 559

Query: 233 VPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFEN 292
           VP+VRVY+AD+L+P++ AKINHGVAICHLDT++WS TH AF+ LGS PGRIEVCHWIFEN
Sbjct: 560 VPKVRVYQADLLDPESKAKINHGVAICHLDTTAWSPTHGAFMALGSGPGRIEVCHWIFEN 619

Query: 293 DLTWTIAD 300
           DLTWTIAD
Sbjct: 620 DLTWTIAD 627

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297841779|ref|XP_002888771.1| hypothetical protein ARALYDRAFT_894840 [Arabidopsis lyrata subsp. lyrata] gi|297334612|gb|EFH65030.1| hypothetical protein ARALYDRAFT_894840 [Arabidopsis lyrata subsp. lyrata]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/298 (64%), Positives = 233/298 (78%), Gaps = 4/298 (1%)

Query: 4   EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTE 63
           E+    +YG S +     FT YG+ A+G  N+I FKTY +  + FKDY K+GV FA Y  
Sbjct: 332 EKVNFVNYGQSFNPGSETFTGYGKGAEG--NKISFKTY-TPNSTFKDYTKNGVAFAKYNA 388

Query: 64  GTPVPKP-SSGSSVNRWVEPGKFFRESMLKNGTLMPMPDIRDRMPRRSLLPRSIVSNLPF 122
            T        G +VN+W+EPGKFFRES LK GT++PMPDI+D+MP+RS LPRSI++ LPF
Sbjct: 389 STITANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPF 448

Query: 123 TSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGN 182
           ++SKL ++K IFHA +NSTME II DA+++CER PS GETKRCVGSAEDMIDFATSVLG 
Sbjct: 449 STSKLGEIKRIFHAGENSTMEGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGR 508

Query: 183 NVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEAD 242
           +V L TTEN  GSKQ ++IG V GINGG++TK+VSCHQSLYPYLLYYCHSVP+VRVYEAD
Sbjct: 509 SVVLRTTENVAGSKQKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEAD 568

Query: 243 ILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
           +LE  +  KINHG+AICH+DTSSW  +H AFL LGS PGRIEVCHWIFEND+ W IAD
Sbjct: 569 LLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	303
TAIR|locus:2034823	622	JP630 "AT1G23760" [Arabidopsis	0.957	0.466	0.626	6.4e-99
TAIR|locus:2016194	626	PG2 "AT1G70370" [Arabidopsis t	0.970	0.469	0.610	2.2e-96
TAIR|locus:2195593	624	PG1 "AT1G60390" [Arabidopsis t	0.957	0.464	0.585	5e-92
TAIR|locus:2179424	392	RD22 "RESPONSIVE TO DESSICATIO	0.607	0.469	0.336	1.6e-24
UNIPROTKB|Q70KG5	389	RAFTIN1A "Protein RAFTIN 1A" [	0.927	0.722	0.274	2.6e-24
UNIPROTKB|Q70KG3	362	RAFTIN1B "Protein RAFTIN 1B" [	0.960	0.803	0.269	1.4e-23
TAIR|locus:2010237	280	USPL1 "AT1G49320" [Arabidopsis	0.610	0.660	0.319	1.9e-21
UNIPROTKB|Q7F8U7	412	BURP13 "BURP domain-containing	0.739	0.543	0.273	1.2e-19

TAIR|locus:2034823 JP630 "AT1G23760" [Arabidopsis thaliana (taxid:3702)]

 Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
 Identities = 186/297 (62%), Positives = 223/297 (75%)

Query:     4 EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTE 63
             E+    +YG S++     F+ YG+ A+G  N+IDFKTY    T FKDY K+GV FA Y  
Sbjct:   333 EKVDFVNYGKSINPGSESFSGYGKGAEG--NKIDFKTYTQNST-FKDYTKTGVEFAKYNR 389

Query:    64 GTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLXXXXXXXXXXXXXSLLPRSIVSNLPFT 123
              +       G +VN+WVEPGKFFRESMLK GTL             S LPRSIVS LPF+
Sbjct:   390 SSL----GGGKTVNKWVEPGKFFRESMLKEGTLIWMPDIKDKMPKRSFLPRSIVSKLPFS 445

Query:   124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
             +SK+ ++K +FHA+DNSTME II DA+ +CER P+  ETKRCVGSAEDMIDFATSVLG +
Sbjct:   446 TSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRS 505

Query:   184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
             V L TTE+  GSK+ +MIG V GINGG VTKSVSCHQSLYPYLLYYCHSVP+VRVYE+D+
Sbjct:   506 VVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVYESDL 565

Query:   244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
             L+PK+ AKINHG+AICH+DTS+W A H AF+ LGS PG+IEVCHWIFEND+ W IAD
Sbjct:   566 LDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHWIFENDMNWAIAD 622

GO:0004650 "polygalacturonase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2016194 PG2 "AT1G70370" [Arabidopsis thaliana (taxid:3702)]

 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 182/298 (61%), Positives = 218/298 (73%)

Query:     4 EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTE 63
             E+    +YG S +     FT YG+ A+G  +++ FKTY    T FKDYAK GV FA Y  
Sbjct:   332 EKVNFVNYGQSFNPGSETFTGYGKGAEG--SKLSFKTYTPNST-FKDYAKKGVAFAKYNV 388

Query:    64 GTPVPKP-SSGSSVNRWVEPGKFFRESMLKNGTLXXXXXXXXXXXXXSLLPRSIVSNLPF 122
              T        G +VN+W+EPGKFFRES LK GT+             S LPRSI++ LPF
Sbjct:   389 STTTANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPF 448

Query:   123 TSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGN 182
             ++SKL ++K IFHA +NSTM  II DA+++CER PS GETKRCVGSAEDMIDFATSVLG 
Sbjct:   449 STSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGR 508

Query:   183 NVALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEAD 242
             +V L TTEN  GSK+ ++IG V GINGG++TK+VSCHQSLYPYLLYYCHSVP+VRVYEAD
Sbjct:   509 SVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEAD 568

Query:   243 ILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
             +LE  +  KINHG+AICH+DTSSW  +H AFL LGS PGRIEVCHWIFEND+ W IAD
Sbjct:   569 LLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD 626

GO:0004650 "polygalacturonase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA

GO:0000272 "polysaccharide catabolic process" evidence=RCA

GO:0005982 "starch metabolic process" evidence=RCA

GO:0007389 "pattern specification process" evidence=RCA

GO:0008361 "regulation of cell size" evidence=RCA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0009926 "auxin polar transport" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010015 "root morphogenesis" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0040007 "growth" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0048653 "anther development" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2195593 PG1 "AT1G60390" [Arabidopsis thaliana (taxid:3702)]

 Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
 Identities = 174/297 (58%), Positives = 213/297 (71%)

Query:     4 EQCPSASYGTSMSARPHDFTRYGQNAKGHQNQIDFKTYGSAYTKFKDYAKSGVTFANYTE 63
             E+    +YG S +    +FT YGQ+  G    + FKTYG   + FK Y K GV FA Y+ 
Sbjct:   335 EKVNFVNYGKSFNLGSDNFTGYGQDNVG--GNVSFKTYGQGQS-FKVYTKDGVVFARYSN 391

Query:    64 GTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLXXXXXXXXXXXXXSLLPRSIVSNLPFT 123
                    S+G +VN+WVE GKFFRE+MLK GTL             + LPR+IV NLPF+
Sbjct:   392 NVS----SNGKTVNKWVEEGKFFREAMLKEGTLMQMPDIKDKMPKRTFLPRNIVKNLPFS 447

Query:   124 SSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN 183
             SS + ++  +F A +NS+M  II  A+S+CER  S GETKRCVGSAEDMIDFATSVLG  
Sbjct:   448 SSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRG 507

Query:   184 VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADI 243
             V + TTEN  GSK+ ++IG V GINGG+VT++VSCHQSLYPYLLYYCHSVP VRVYE D+
Sbjct:   508 VVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVYETDL 567

Query:   244 LEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIAD 300
             L+PK++ KINHGVAICH+DTS+WS +H AFL LGS PG+IEVCHWIFEND+TW I D
Sbjct:   568 LDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHWIFENDMTWNIID 624

GO:0004650 "polygalacturonase activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2179424 RD22 "RESPONSIVE TO DESSICATION 22" [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 64/190 (33%), Positives = 93/190 (48%)

Query:   110 SLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSA 169
             + LPR     +PF S K ++  + F     S    ++K  + +CE     GE K C  S 
Sbjct:   203 AFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSL 262

Query:   170 EDMIDFATSVLGN-NVALHTTENAKGSK--QDIMIGTVKGINGGEVTKSVSCHQSLYPYL 226
             E M+DF+ S LG  +V   +TE AK +   Q   I    G+      KSV CH+  YP+ 
Sbjct:   263 ESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAA-GVKKLSDDKSVVCHKQKYPFA 321

Query:   227 LYYCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVC 286
             ++YCH      VY    LE +   +    VA+CH +TS+W+  H AF  L   PG + VC
Sbjct:   322 VFYCHKAMMTTVYAVP-LEGENGMRAK-AVAVCHKNTSAWNPNHLAFKVLKVKPGTVPVC 379

Query:   287 HWIFENDLTW 296
             H++ E  + W
Sbjct:   380 HFLPETHVVW 389

GO:0005576 "extracellular region" evidence=ISM

GO:0009269 "response to desiccation" evidence=IEP;RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0045735 "nutrient reservoir activity" evidence=TAS

GO:0009409 "response to cold" evidence=RCA

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|Q70KG5 RAFTIN1A "Protein RAFTIN 1A" [Triticum aestivum (taxid:4565)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 82/299 (27%), Positives = 124/299 (41%)

Query:     7 PSASYGTSMSARPHDFTRY--GQNAKGHQN---QIDFKTYGSAYTKFKDYAKSGVTFANY 61
             PS S G +  AR  D+  Y  G   +G  +     D+  Y  A  K +         ++ 
Sbjct:    91 PSKSTGAASGARDFDYDDYSGGDKLRGAASGARDFDYDDYSGA-DKLRGATDEYKAPSSS 149

Query:    62 TEGTPVPKPSSGSSVNRWVEPGKFFRESMLKNGTLXXXXXXXXXXXXXSLLPRSIVSNLP 121
               G        G +    V    FF E  ++ G                 LPR +  ++P
Sbjct:   150 LAGNGASMARGGKAETTTV----FFHEEAVRVGKRLPFRFPPATPAALGFLPRQVADSVP 205

Query:   122 FTSSKLNQLKEIFH-ASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVL 180
             FT++ L  +   F  ASD++T+ S+ +  L  CE     GE+K C  S E +++ A  VL
Sbjct:   206 FTTAALPGVLATFGVASDSATVASM-EATLRACESPTIAGESKFCATSLEALVERAMEVL 264

Query:   181 GNN---VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVR 237
             G         T   A    Q   + +V+ + GG V   V+CH   YPY +Y CH+    R
Sbjct:   265 GTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPVF--VACHDEAYPYTVYRCHTTGPSR 322

Query:   238 VYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTW 296
              Y  D+   +    +     +CH DTS W+  H +F  LG+ PG   VCH +    + W
Sbjct:   323 AYMVDMEGARGGDAVTIAT-VCHTDTSLWNPEHVSFKLLGTKPGGTPVCHLMPYGHIIW 380

GO:0009555 "pollen development" evidence=ISS

GO:0043668 "exine" evidence=IDA

UNIPROTKB|Q70KG3 RAFTIN1B "Protein RAFTIN 1B" [Triticum aestivum (taxid:4565)]

 Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 83/308 (26%), Positives = 128/308 (41%)

Query:     1 MKMEQCPSASYGTSMSARP-HDFTRYGQNAKGHQ-NQIDFKTYGSAYTKFKDYAKSGVTF 58
             +K     S S+      RP  D+  Y +++   + ++      G+    + +Y+ +    
Sbjct:    51 LKQPAAESTSFVRDPEDRPPFDYRDYSRSSSDDEPSKSTVAASGAGGFDYDNYSGADER- 109

Query:    59 ANYTEGTPVPKPSSGSSVNRWVEPGK------FFRESMLKNGTLXXXXXXXXXXXXXSLL 112
                T+    P  S   S       GK      FF E  ++ G                 L
Sbjct:   110 RGATDEYKAPSSSLAGSGAYMARGGKAETTTVFFHEEAVRVGRRLPFHFPPATPAALGFL 169

Query:   113 PRSIVSNLPFTSSKLNQLKEIFH-ASDNSTMESIIKDALSDCERAPSKGETKRCVGSAED 171
             PR +  ++PFT++ L  +   F  ASD++T+ S+ +  L  CE     GE+K C  S E 
Sbjct:   170 PRQVADSVPFTTAALPGILATFGIASDSTTVPSM-EATLRACESPTIAGESKFCATSLEA 228

Query:   172 MIDFATSVLGNN---VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLY 228
             +++ A  VLG         T   A    Q   +  V+ + GG V   V+CH   YPY +Y
Sbjct:   229 LVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVF--VACHDEAYPYTVY 286

Query:   229 YCHSVPEVRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHW 288
              CH+    R Y  D +E    A      A+CH DTS W+  H +F  LG+ PG   VCH 
Sbjct:   287 RCHTTGPSRAYTVD-MEGARGADAVTIAAVCHTDTSLWNPEHVSFKLLGTKPGGTPVCHL 345

Query:   289 IFENDLTW 296
             +    + W
Sbjct:   346 MPYGHIIW 353

GO:0009555 "pollen development" evidence=ISS

GO:0043668 "exine" evidence=IDA

TAIR|locus:2010237 USPL1 "AT1G49320" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 62/194 (31%), Positives = 91/194 (46%)

Query:   111 LLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAE 170
             LL R     +PFT SKL+ L + F  + +S     IK+ L  C+    +GE K C  S E
Sbjct:    85 LLTRQQADLIPFTKSKLDFLLDHFSITKDSPQGKAIKETLGHCDAKAIEGEHKFCGTSLE 144

Query:   171 DMIDFATSVLGNNVALHT-TENAKGSKQDIMIGTVKGINGGEVTKSV------SCHQSLY 223
              +ID     +G NV L   T       Q+ +   +      E  K +       CH+  Y
Sbjct:   145 SLIDLVKKTMGYNVDLKVMTTKVMVPAQNSISYALHNYTFVEAPKELVGIKMLGCHRMPY 204

Query:   224 PYLLYYCHSVPE-VRVYEADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGR 282
             PY +YYCH      RV+E +++      ++  G A+CH+DTS+W A H AF  L   P  
Sbjct:   205 PYAVYYCHGHKGGSRVFEVNLVTDDGRQRVV-GPAVCHMDTSTWDADHVAFKVLKMEPRS 263

Query:   283 IEVCHWIFENDLTW 296
               VCH+   +++ W
Sbjct:   264 APVCHFFPLDNIVW 277

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0000326 "protein storage vacuole" evidence=IDA

GO:0048316 "seed development" evidence=IMP

UNIPROTKB|Q7F8U7 BURP13 "BURP domain-containing protein 13" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 238 (88.8 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 66/241 (27%), Positives = 105/241 (43%)

Query:    70 PSSGS-----SVNRWVEPGK----FFRESMLKNGTLXXXXXXXXXXXXXSLLPRSIVSNL 120
             PSSGS     +  R V  G     FF E  ++ G                 LPR +  ++
Sbjct:   166 PSSGSGTAASTTARGVGTGATTTVFFHEEAVRVGERLPFYFPAATTSALGFLPRRVADSI 225

Query:   121 PFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVL 180
             PFT++ L  +  +F  + ++   + +++ L  CE     GE+K C  S E +++ A + L
Sbjct:   226 PFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAAL 285

Query:   181 GNN--VALHTTENAKGSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRV 238
             G     AL +T    G+   +    V+ +   E    V+CH   YPY +Y CH+    R 
Sbjct:   286 GTRDIAALASTLPRGGAP--LQAYAVRAVLPVEGAGFVACHDQAYPYTVYRCHTTGPARA 343

Query:   239 YEADILEPKTMAKINHGVAI---CHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLT 295
             Y  + +E          V +   CH +TS W+  H +F  LG+ PG   VCH +    + 
Sbjct:   344 YMVE-MEGDGGGDGGEAVTVATVCHTNTSRWNPEHVSFKLLGTKPGGSPVCHLMPYGHIV 402

Query:   296 W 296
             W
Sbjct:   403 W 403


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      303       290   0.00089  115 3  11 23  0.42    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  228 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.67u 0.15s 21.82t   Elapsed:  00:00:01
  Total cpu time:  21.67u 0.15s 21.82t   Elapsed:  00:00:01
  Start:  Fri May 10 04:59:46 2013   End:  Fri May 10 04:59:47 2013

GO:0009555 "pollen development" evidence=IMP

GO:0043668 "exine" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.VIII.359.1 hypothetical protein (598 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	303
smart01045	222	smart01045, BURP, The BURP domain is found at the	1e-107
pfam03181	216	pfam03181, BURP, BURP domain	3e-91

>gnl|CDD|214992 smart01045, BURP, The BURP domain is found at the C-terminus of several different plant proteins

 Score =  309 bits (793), Expect = e-107
 Identities = 130/225 (57%), Positives = 157/225 (69%), Gaps = 11/225 (4%)

Query: 83  GKFFRESMLKNGTLMPMPDIRDR-MPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNST 141
           GKFFRE+ LK GTLM MP I+D  MP+R  LPR I   LPF+SSK++++  +F A+ NS 
Sbjct: 1   GKFFRENDLKEGTLMLMPFIKDDLMPKRPFLPRQIADLLPFSSSKIDEILRVFSATKNSP 60

Query: 142 MESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGN-NVALHTTENAKGSKQ--- 197
           M  IIK+ + +CE    +GETKRCV S E MIDFATSVLG   V + TTE   GSK    
Sbjct: 61  MAGIIKETVGECEAPAIEGETKRCVTSLESMIDFATSVLGRYVVKVRTTEVVVGSKNKAL 120

Query: 198 ---DIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINH 254
               ++I  VKG+NG   TKSVSCHQSLYPY +YYCHSVP VRVYE D+L+PK M KIN 
Sbjct: 121 HNYTVVIAKVKGLNG---TKSVSCHQSLYPYAVYYCHSVPGVRVYEVDLLDPKGMRKINV 177

Query: 255 GVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIA 299
           G A+CH+DTS+W A H AF  L S PG+I VCH+I END+ W I 
Sbjct: 178 GPAVCHMDTSAWDANHGAFKVLKSEPGQIPVCHFIPENDMVWVIK 222

It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown. Length = 222

>gnl|CDD|202568 pfam03181, BURP, BURP domain

 Score =  269 bits (691), Expect = 3e-91
 Identities = 89/221 (40%), Positives = 116/221 (52%), Gaps = 9/221 (4%)

Query: 83  GKFFRESMLKNGTLMP--MPDIRDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNS 140
           G FF E  LK G  MP   P I D   +R  LPR I  ++PF+S KL ++  +F     S
Sbjct: 1   GLFFLEKDLKPGKKMPLHFPKITDG-AKRPFLPRQIADSIPFSSEKLPEILAMFSVPPGS 59

Query: 141 TMESIIKDALSDCERAPSKGETKRCVGSAEDMIDFATSVLGNN--VALHTTENAKGSKQD 198
               I+K  L +CE    KGE K C  S E M+DFATS LG     A+ T     G  Q 
Sbjct: 60  VEAKIMKSTLRECEAPAIKGEEKFCATSLESMVDFATSKLGTRDIRAVSTEVEGGGPLQK 119

Query: 199 IMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYEADILEPKTMAKINHGVAI 258
             +  VK + GG   K V+CH  LYPY ++YCH+VP+ R YE D++           VA+
Sbjct: 120 YTVEGVKPVAGG--GKVVACHPMLYPYAVFYCHTVPKTRAYEVDLVGADG--TKVKAVAV 175

Query: 259 CHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIA 299
           CH DTS+W+  H AF  LG  PG + VCH++ E  + W   
Sbjct: 176 CHTDTSAWNPKHVAFQVLGVKPGTVPVCHFLPEGHVVWVPN 216

The BURP domain is found at the C-terminus of several different plant proteins. It was named after the proteins in which it was first identified: the BNM2 clone-derived protein from Brassica napus; USPs and USP-like proteins; RD22 from Arabidopsis thaliana; and PG1beta from Lycopersicon esculentum. This domain is around 230 amino acid residues long. It possesses the following conserved features: two phenylalanine residues at its N-terminus; two cysteine residues; and four repeated cysteine-histidine motifs, arranged as: CH-X(10)-CH-X(25-27)-CH-X(25-26)-CH, where X can be any amino acid. The function of this domain is unknown. Length = 216

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	303
PF03181	216	BURP: BURP domain; InterPro: IPR004873 The BURP do	100.0

>PF03181 BURP: BURP domain; InterPro: IPR004873 The BURP domain is a ~230-residue module, which has been named for the four members of the group initially identified, BNM2, USP, RD22, and PG1beta

Probab=100.00  E-value=1.5e-88  Score=617.19  Aligned_cols=212  Identities=42%  Similarity=0.753  Sum_probs=201.7

Q ss_pred             cccccccCCCCccccCCCC-CCCCCCCCCCCccccCcCCCCcccHHHHHHHhCCCCCchHHHHHHHHHHHhccCCCCCCc
Q 045773           84 KFFRESMLKNGTLMPMPDI-RDRMPRRSLLPRSIVSNLPFTSSKLNQLKEIFHASDNSTMESIIKDALSDCERAPSKGET  162 (303)
Q Consensus        84 ~FF~e~dL~~G~~m~l~~~-~d~~~~~~FLPr~vA~siPFSs~~l~~iL~~F~i~~~S~~A~~m~~Tl~~CE~~~~~GE~  162 (303)
                      +||+|+||+||++|+|+|. .+..+.++||||++|++||||+++|++||++|+|+++|+||++|++||++||.+|++||+
T Consensus         2 ~fF~e~dL~~G~~m~l~f~~~~~~~~~~fLpr~~A~siPfss~~l~~iL~~Fsi~~~S~~A~~m~~Tl~~Ce~~~~~GE~   81 (216)
T PF03181_consen    2 LFFLEKDLHPGKKMPLYFPKSDNSAKRPFLPRQVADSIPFSSSKLPEILQMFSIPPGSPMAKAMKNTLEECESPPIKGET   81 (216)
T ss_pred             cccCHHHCCCCceeeecCCCCCCCcccccCCHHHhccCCcCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCCCcC
Confidence            6999999999999999984 344467999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCChHHHHHHHHhhcCC-ceeEEeeeccc-CCcceEEEeeeeeecCCCccceeeecccCCceeeeEeeeeCceeEEE
Q 045773          163 KRCVGSAEDMIDFATSVLGN-NVALHTTENAK-GSKQDIMIGTVKGINGGEVTKSVSCHQSLYPYLLYYCHSVPEVRVYE  240 (303)
Q Consensus       163 K~CaTSLESMvdFa~S~LG~-~v~~~st~~~~-~s~~~~~v~~V~~i~g~~~~k~V~CH~~~yPYaVyyCH~v~~trvY~  240 (303)
                      |+||||||||+||++|+||+ ++++++|+... ...|+|+|++|++|.+  .+++|+||+|+|||+|||||.+++||+|+
T Consensus        82 k~CaTSLESMvdF~~s~LG~~~v~a~st~~~~~~~~~~y~V~~v~~i~~--~~~~V~CH~~~yPYaVyyCH~~~~t~~y~  159 (216)
T PF03181_consen   82 KYCATSLESMVDFAVSKLGTRNVRALSTEVPKSTPLQNYTVEGVKKIGG--GDKSVVCHKMPYPYAVYYCHSIPPTRVYM  159 (216)
T ss_pred             ccCcCCHHHHHHHHHHhcCCCccEEEeccccCCCCCccEEEEeeeeecC--CCceEEEcccCCceeEEEeeecCceeEEE
Confidence            99999999999999999998 79999998877 4578999999999976  37999999999999999999999999999


Q ss_pred             EEeecCcCcccceEEEEEeecCCCCCCCChhHHHhhCCCCCCCceeeEEeCCceEEeec
Q 045773          241 ADILEPKTMAKINHGVAICHLDTSSWSATHEAFLTLGSSPGRIEVCHWIFENDLTWTIA  299 (303)
Q Consensus       241 V~L~~~d~~g~~~~avAVCH~DTS~W~p~H~aF~~L~~kPG~~~VCHfi~~~~ivWvp~  299 (303)
                      |+|+|+|  |++++||||||+|||.|||+|+||++||+|||++|||||+++|+|+|+|+
T Consensus       160 V~l~g~d--g~~~~avavCH~DTS~W~p~h~aF~~L~vkPG~~~VCHf~~~~~ivWv~~  216 (216)
T PF03181_consen  160 VPLVGED--GTKVEAVAVCHLDTSGWNPDHPAFQVLGVKPGTVPVCHFLPNDHIVWVPN  216 (216)
T ss_pred             EEEeecC--CceEEEEEEEecCCCCCCcchHHHHHhCCCCCCcceEEEeeCCeEEEccC
Confidence            9999999  78999999999999999999999999999999999999999999999986

It is found in the C-terminal part of a number of plant cell wall proteins, which are defined not only by the BURP domain, but also by the overall similarity in their modular construction. The BURP domain proteins consists of either three or four modules: (i) an N-terminal hydrophobic domain - a presumptive transit peptide, joined to (ii) a short conserved segment or other short segment, (iii) an optional segment consisting of repeated units which is unique to each member, and (iv) the C-terminal BURP domain. Although the BURP domain proteins share primary structural features, their expression patterns and the conditions under which they are expressed differ. The presence of the conserved BURP domain in diverse plant proteins suggests an important and fundamental functional role for this domain []. It is possible that the BURP domain represents a general motif for localization of proteins within the cell wall matrix. The other structural domains associated with the BURP domain may specify other target sites for intermolecular interactions []. Some proteins known to contain a BURP domain are listed below [, , ]: Brassica protein BNM2, which is expressed during the induction of microspore embryogenesis. Field bean USPs, abundant non-storage seed proteins with unknown function. Soybean USP-like proteins ADR6 (or SALI5-4A), an auxin-repressible, aluminium-inducible protein and SALI3-2, a protein that is up-regulated by aluminium. Soybean seed coat BURP-domain protein 1 (SCB1). It might play a role in the differentiation of the seed coat parenchyma cells. Arabidopsis RD22 drought induced protein. Maize ZRP2, a protein of unknown function in cortex parenchyma. Tomato PG1beta, the beta-subunit of polygalacturonase isozyme 1 (PG1), which is expressed in ripening fruits. Cereal RAFTIN. It is essential specifically for the maturation phase of pollen development.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00