Citrus Sinensis ID: 045817
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 202 | ||||||
| 255575861 | 204 | Glycolipid transfer protein, putative [R | 0.995 | 0.985 | 0.825 | 6e-97 | |
| 224107453 | 207 | predicted protein [Populus trichocarpa] | 0.995 | 0.971 | 0.810 | 1e-95 | |
| 346469337 | 218 | hypothetical protein [Amblyomma maculatu | 0.990 | 0.917 | 0.82 | 6e-95 | |
| 242062370 | 202 | hypothetical protein SORBIDRAFT_04g02642 | 1.0 | 1.0 | 0.787 | 3e-93 | |
| 226493243 | 202 | pleckstrin homology domain containing, f | 1.0 | 1.0 | 0.787 | 4e-93 | |
| 238908804 | 202 | unknown [Zea mays] gi|413923106|gb|AFW63 | 1.0 | 1.0 | 0.792 | 5e-93 | |
| 363543183 | 202 | pleckstrin homology domain containing, f | 1.0 | 1.0 | 0.792 | 6e-93 | |
| 195623782 | 202 | pleckstrin homology domain containing, f | 1.0 | 1.0 | 0.792 | 9e-93 | |
| 242092030 | 202 | hypothetical protein SORBIDRAFT_10g00387 | 1.0 | 1.0 | 0.787 | 1e-92 | |
| 297826803 | 202 | hypothetical protein ARALYDRAFT_482291 [ | 1.0 | 1.0 | 0.777 | 2e-92 |
| >gi|255575861|ref|XP_002528828.1| Glycolipid transfer protein, putative [Ricinus communis] gi|223531740|gb|EEF33562.1| Glycolipid transfer protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 166/201 (82%), Positives = 185/201 (92%)
Query: 2 EGTAFSPSLEGMKHVKSEQGEMLTKPFLEVCKLILPVLDKFGAAMSLVKSDIGGNITRLE 61
EGT F+PSLEGMKHVKSEQGEMLTKPFL+VCKLILPV+DKFGAAM+LVKSDIGGNITRLE
Sbjct: 4 EGTVFTPSLEGMKHVKSEQGEMLTKPFLDVCKLILPVIDKFGAAMALVKSDIGGNITRLE 63
Query: 62 NKYLSDPEKYKNLYSMVGEEVEAKTAKRSSSCTNGLLWLTRAMDFLVELFRNLLAHPDWT 121
KY DP KY +LY+MV EE++AKTAK SSSCTNGLLWLTRAMDFLVELFRNLLAH DW+
Sbjct: 64 TKYSCDPTKYTHLYTMVQEEIDAKTAKGSSSCTNGLLWLTRAMDFLVELFRNLLAHQDWS 123
Query: 122 MPQVCTDSYSKTLKKFHGWIASSSFTVAMKLAPDRKKFMEVIGGSGDVNSDMDKFCTAFA 181
M Q CTDSY KTLKKFHGW+ASSSFTVAMKLAPDRKKFM+VI GSGD+ +DM+ FC++F+
Sbjct: 124 MSQACTDSYGKTLKKFHGWLASSSFTVAMKLAPDRKKFMDVIAGSGDIAADMENFCSSFS 183
Query: 182 PLLEENHKFLASVGMDDLKAS 202
P L+ENHKFLAS+GMDDLKAS
Sbjct: 184 PFLQENHKFLASIGMDDLKAS 204
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224107453|ref|XP_002314485.1| predicted protein [Populus trichocarpa] gi|222863525|gb|EEF00656.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|346469337|gb|AEO34513.1| hypothetical protein [Amblyomma maculatum] | Back alignment and taxonomy information |
|---|
| >gi|242062370|ref|XP_002452474.1| hypothetical protein SORBIDRAFT_04g026420 [Sorghum bicolor] gi|241932305|gb|EES05450.1| hypothetical protein SORBIDRAFT_04g026420 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
| >gi|226493243|ref|NP_001149896.1| pleckstrin homology domain containing, family A [Zea mays] gi|195621864|gb|ACG32762.1| pleckstrin homology domain containing, family A [Zea mays] gi|195635327|gb|ACG37132.1| pleckstrin homology domain containing, family A [Zea mays] gi|195641188|gb|ACG40062.1| pleckstrin homology domain containing, family A [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|238908804|gb|ACF86685.2| unknown [Zea mays] gi|413923106|gb|AFW63038.1| putative glycolipid transfer protein (GLTP) family protein isoform 1 [Zea mays] gi|413923107|gb|AFW63039.1| putative glycolipid transfer protein (GLTP) family protein isoform 2 [Zea mays] gi|413923108|gb|AFW63040.1| putative glycolipid transfer protein (GLTP) family protein isoform 3 [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|363543183|ref|NP_001241805.1| pleckstrin homology domain containing, family A [Zea mays] gi|195612686|gb|ACG28173.1| pleckstrin homology domain containing, family A [Zea mays] gi|195657457|gb|ACG48196.1| pleckstrin homology domain containing, family A [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|195623782|gb|ACG33721.1| pleckstrin homology domain containing, family A [Zea mays] gi|195642780|gb|ACG40858.1| pleckstrin homology domain containing, family A [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|242092030|ref|XP_002436505.1| hypothetical protein SORBIDRAFT_10g003870 [Sorghum bicolor] gi|241914728|gb|EER87872.1| hypothetical protein SORBIDRAFT_10g003870 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
| >gi|297826803|ref|XP_002881284.1| hypothetical protein ARALYDRAFT_482291 [Arabidopsis lyrata subsp. lyrata] gi|297327123|gb|EFH57543.1| hypothetical protein ARALYDRAFT_482291 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 202 | ||||||
| TAIR|locus:2051043 | 202 | GLTP1 "glycolipid transfer pro | 1.0 | 1.0 | 0.762 | 8e-85 | |
| TAIR|locus:2027042 | 223 | GLTP2 "glycolipid transfer pro | 0.915 | 0.829 | 0.386 | 1.8e-30 | |
| TAIR|locus:2094736 | 233 | GLTP3 "GLYCOLIPID TRANSFER PRO | 0.871 | 0.755 | 0.361 | 3.4e-29 | |
| CGD|CAL0001291 | 197 | HET1 [Candida albicans (taxid: | 0.920 | 0.944 | 0.343 | 1.1e-23 | |
| UNIPROTKB|Q59L90 | 197 | HET1 "Putative uncharacterized | 0.920 | 0.944 | 0.343 | 1.1e-23 | |
| ZFIN|ZDB-GENE-041114-69 | 549 | plekha8 "pleckstrin homology d | 0.752 | 0.276 | 0.348 | 2.5e-20 | |
| UNIPROTKB|E2QV70 | 403 | PLEKHA9 "Uncharacterized prote | 0.712 | 0.357 | 0.335 | 3.9e-19 | |
| RGD|1563940 | 520 | Plekha8 "pleckstrin homology d | 0.826 | 0.321 | 0.308 | 5.6e-19 | |
| MGI|MGI:2681164 | 519 | Plekha8 "pleckstrin homology d | 0.826 | 0.321 | 0.308 | 7.1e-19 | |
| UNIPROTKB|D2KC46 | 519 | PLEKHA8 "Pleckstrin homology d | 0.712 | 0.277 | 0.335 | 9.2e-19 |
| TAIR|locus:2051043 GLTP1 "glycolipid transfer protein 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 154/202 (76%), Positives = 180/202 (89%)
Query: 1 MEGTAFSPSLEGMKHVKSEQGEMLTKPFLEVCKLILPVLDKFGAAMSLVKSDIGGNITRL 60
MEGT F+P LEGMKHVKS+QGEMLTKPFLE+CK ILPV+DKFGAAM+LVKSDIGGNITRL
Sbjct: 1 MEGTVFTPCLEGMKHVKSDQGEMLTKPFLELCKTILPVIDKFGAAMTLVKSDIGGNITRL 60
Query: 61 ENKYLSDPEKYKNLYSMVGEEVEAKTAKRSSSCTNGLLWLTRAMDFLVELFRNLLAHPDW 120
E YLSDP+K+K LY+ V E+E+K AK SSSCTNGLLWLTRAMDFLVELFRNL+AH DW
Sbjct: 61 EKNYLSDPDKFKYLYTFVQVEIESKIAKGSSSCTNGLLWLTRAMDFLVELFRNLVAHQDW 120
Query: 121 TMPQVCTDSYSKTLKKFHGWIASSSFTVAMKLAPDRKKFMEVIGGSGDVNSDMDKFCTAF 180
+MPQ C DSY KTLKK+HGW+ASS+F++A+KLAPDRKKFM+VI GSG++ +DM++FC F
Sbjct: 121 SMPQACADSYQKTLKKWHGWLASSTFSMALKLAPDRKKFMDVISGSGNIQADMERFCAEF 180
Query: 181 APLLEENHKFLASVGMDDLKAS 202
P L +NHKFLASVGMDD+KAS
Sbjct: 181 GPFLHDNHKFLASVGMDDMKAS 202
|
|
| TAIR|locus:2027042 GLTP2 "glycolipid transfer protein 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2094736 GLTP3 "GLYCOLIPID TRANSFER PROTEIN 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001291 HET1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q59L90 HET1 "Putative uncharacterized protein HET1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-041114-69 plekha8 "pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2QV70 PLEKHA9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| RGD|1563940 Plekha8 "pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2681164 Plekha8 "pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|D2KC46 PLEKHA8 "Pleckstrin homology domain-containing family A member 8" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00100340 | hypothetical protein (207 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 202 | |||
| pfam08718 | 148 | pfam08718, GLTP, Glycolipid transfer protein (GLTP | 8e-65 |
| >gnl|CDD|204041 pfam08718, GLTP, Glycolipid transfer protein (GLTP) | Back alignment and domain information |
|---|
Score = 196 bits (500), Expect = 8e-65
Identities = 70/146 (47%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Query: 21 GEMLTKPFLEVCKLILPVLDKFGAAMSLVKSDIGGNITRLENKYLSDPEKYKNLYSMVGE 80
++ TKPFLE C+ ++ DK G A S VK DI GNIT+LE +Y SDPE+YK L +V +
Sbjct: 1 NDIPTKPFLEACEELVKFFDKLGTAFSFVKKDIKGNITKLEKRYESDPEEYKTLQDLVLK 60
Query: 81 EVEAKTAKRSSSCTNGLLWLTRAMDFLVELFRNLLAHPDWT-MPQVCTDSYSKTLKKFHG 139
E E AK+ S T GLLWL R +DF+ LL PD + CT++Y+KTLK HG
Sbjct: 61 EKENGLAKKKGSATRGLLWLKRGLDFIKVFLERLLTDPDDEKLSDACTEAYNKTLKPHHG 120
Query: 140 WIASSSFTVAMKLAPDRKKFMEVIGG 165
W+ +F +AMK P RK F+E +GG
Sbjct: 121 WLVRKAFKLAMKALPSRKDFLEKLGG 146
|
GLTP is a cytosolic protein that catalyzes the intermembrane transfer of glycolipids. Length = 148 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 202 | |||
| KOG3221 | 199 | consensus Glycolipid transfer protein [Carbohydrat | 100.0 | |
| PF08718 | 149 | GLTP: Glycolipid transfer protein (GLTP); InterPro | 100.0 | |
| KOG4189 | 209 | consensus Uncharacterized conserved protein [Funct | 100.0 |
| >KOG3221 consensus Glycolipid transfer protein [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-53 Score=345.67 Aligned_cols=191 Identities=41% Similarity=0.722 Sum_probs=181.8
Q ss_pred HHhccccccCCCCcChHHHHHHHHHHHHHHHhhcchhHHHHHhHhhhHHHHHHHhhcCchhhhhHHHHHHHHHHhcCCCC
Q 045817 10 LEGMKHVKSEQGEMLTKPFLEVCKLILPVLDKFGAAMSLVKSDIGGNITRLENKYLSDPEKYKNLYSMVGEEVEAKTAKR 89 (202)
Q Consensus 10 ~~~f~~~~~~~~~i~~~~fl~a~~~l~~~~d~lG~~f~~v~~Dv~~ni~~l~~~~~~~~~~~~tl~~~v~~E~~~~~~~~ 89 (202)
.+.|....+++++|+|.+||+||.+|+||+|+||++|+||++||+|||++++++|.+++++++||+.+|+.|++..+.+
T Consensus 5 ~e~~~~~l~~d~~i~T~~FL~ac~~i~pvid~lG~~ftpVk~Di~gNI~kv~~~y~~d~~k~~~Lq~~i~~eie~~~a~- 83 (199)
T KOG3221|consen 5 LEHFLKPLPDDGKIETGPFLEACKHIVPVIDKLGAVFTPVKSDISGNITKVKKVYDTDKEKFKYLQKIVKVEIETDIAE- 83 (199)
T ss_pred cccCCCCCCcccCCccHHHHHHHhhhhhHHHHhhhhhHhHHHHhhccHHHHHHHHhcChHHHHHHHHHHHHHHHHhhcc-
Confidence 4567777888999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHhhhhcchhhHHHHHHHhhhCCChHHHHHHhcCC---
Q 045817 90 SSSCTNGLLWLTRAMDFLVELFRNLLAHPDWTMPQVCTDSYSKTLKKFHGWIASSSFTVAMKLAPDRKKFMEVIGGS--- 166 (202)
Q Consensus 90 ~~s~sr~LLwL~R~L~Fi~~~l~~l~~~~~~~~~~~a~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~~fl~~l~~~--- 166 (202)
.+|||++||||+|||+|++.||++|..+.+++++.++.+||+.||+|||||++|++|++|++++|+|++|++.++.+
T Consensus 84 ~~sat~aLLWLkRgldF~~~~l~~l~~~~~~~l~~av~daY~kTLK~~HGwI~q~~FkvaLklvP~r~~Fl~als~~d~t 163 (199)
T KOG3221|consen 84 KVSATLALLWLKRGLDFTLAFLQELVNGESDCLIQAVADAYEKTLKKYHGWIVQSTFKVALKLVPDRKTFLKALSAGDET 163 (199)
T ss_pred cchhhHHHHHHHhHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCcHHHHHHHHhcccch
Confidence 89999999999999999999999999998878999999999999999999999999999999999999999999732
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 045817 167 -GDVNSDMDKFCTAFAPLLEENHKFLASVGMDDLKA 201 (202)
Q Consensus 167 -~~~~~~~~~~~~~l~~~~~~i~~~~~~~~l~~~~~ 201 (202)
+...++|+.++..++|+++.|..+|+++|++++|+
T Consensus 164 ~~~~~edi~~fl~~~~~~L~~i~~~l~~~~ld~~~~ 199 (199)
T KOG3221|consen 164 YDECIEDITSFLSLLTPILKEIYFVLEQYGLDDLRS 199 (199)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHhccccccC
Confidence 34788999999999999999999999999999985
|
|
| >PF08718 GLTP: Glycolipid transfer protein (GLTP); InterPro: IPR014830 Glycolipid transfer protein (GLTP) is a cytosolic protein that catalyses the intermembrane transfer of glycolipids such as glycosphingolipids, glyceroglycolipids, and possibly glucosylceramides, but not of phospholipids | Back alignment and domain information |
|---|
| >KOG4189 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 202 | ||||
| 2bv7_A | 208 | Crystal Structure Of Gltp With Bound Gm3 Length = 2 | 1e-14 | ||
| 1tfj_A | 219 | Crystal Structure Of Bovine Glycolipid Transfer Pro | 1e-14 | ||
| 1swx_A | 209 | Crystal Structure Of A Human Glycolipid Transfer Pr | 1e-14 | ||
| 1wbe_A | 209 | X-Ray Structure Of Bovine Gltp Length = 209 | 1e-14 | ||
| 2i3f_A | 224 | Crystal Structure Of A Glycolipid Transfer-Like Pro | 3e-14 | ||
| 2evt_A | 209 | Crystal Structure Of D48v Mutant Of Human Glycolipi | 1e-13 | ||
| 3ric_A | 209 | Crystal Structure Of D48v||a47d Mutant Of Human Gly | 2e-13 | ||
| 3kv0_A | 209 | Crystal Structure Of Het-C2: A Fungal Glycolipid Tr | 1e-09 |
| >pdb|2BV7|A Chain A, Crystal Structure Of Gltp With Bound Gm3 Length = 208 | Back alignment and structure |
|
| >pdb|1TFJ|A Chain A, Crystal Structure Of Bovine Glycolipid Transfer Protein In Complex With A Fatty Acid Length = 219 | Back alignment and structure |
| >pdb|1SWX|A Chain A, Crystal Structure Of A Human Glycolipid Transfer Protein In Apo-Form Length = 209 | Back alignment and structure |
| >pdb|1WBE|A Chain A, X-Ray Structure Of Bovine Gltp Length = 209 | Back alignment and structure |
| >pdb|2I3F|A Chain A, Crystal Structure Of A Glycolipid Transfer-Like Protein From Galdieria Sulphuraria Length = 224 | Back alignment and structure |
| >pdb|2EVT|A Chain A, Crystal Structure Of D48v Mutant Of Human Glycolipid Transfer Protein Length = 209 | Back alignment and structure |
| >pdb|3RIC|A Chain A, Crystal Structure Of D48v||a47d Mutant Of Human Glycolipid Transfer Protein Complexed With 3-O-Sulfo-Galactosylceramide Containing Nervonoyl Acyl Chain (24:1) Length = 209 | Back alignment and structure |
| >pdb|3KV0|A Chain A, Crystal Structure Of Het-C2: A Fungal Glycolipid Transfer Pr (Gltp) Length = 209 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 202 | |||
| 2i3f_A | 224 | Glycolipid transfer-like protein; GLTP superfamily | 3e-56 | |
| 3rzn_A | 209 | GLTP, glycolipid transfer protein; GLTP-fold, lipi | 1e-52 | |
| 3kv0_A | 209 | HET-C2; GLTP, glycolipid transfer protein, transpo | 2e-48 |
| >2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A Length = 224 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 3e-56
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 10/199 (5%)
Query: 2 EGTAFSPSLEGMKHVK-SEQGEMLTKPFLEVCKLILPVLDKFGAAMSLVKSDIGGNITRL 60
E F + K V E G++ +PFL K +L V+D FG+ +VK+DI GNI +L
Sbjct: 8 EKEDFGIIVILWKQVTVKEDGKVPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGNIKKL 67
Query: 61 ENKYLSDPEKYKNLYSMVGEEVEAKTAKRSSSCTNGLLWLTRAMDFLVELFRNLLAHPDW 120
+ L ++ E T LLWL RA F+ R L D
Sbjct: 68 YRAN--QTVHAETLQELIIAENSPD-----GLATVALLWLKRAFQFIASFLRRL-VVTDK 119
Query: 121 TMPQVCTDSYSKTLKKFHGWIASSSFTVAMKLAPDRKKFMEVIGGSGD-VNSDMDKFCTA 179
++ Q T++Y+ TL+ H + F +KLAP R++F + + + +++F
Sbjct: 120 SLEQCVTEAYNCTLRPCHSAVIQKVFWGGVKLAPSRERFYRKLHPDLNIAKAKIEEFLIE 179
Query: 180 FAPLLEENHKFLASVGMDD 198
L +F ++D
Sbjct: 180 LHDPLCCIVQFFFQRELED 198
|
| >3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A* Length = 209 | Back alignment and structure |
|---|
| >3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina} Length = 209 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 202 | |||
| 3kv0_A | 209 | HET-C2; GLTP, glycolipid transfer protein, transpo | 100.0 | |
| 2i3f_A | 224 | Glycolipid transfer-like protein; GLTP superfamily | 100.0 | |
| 3rzn_A | 209 | GLTP, glycolipid transfer protein; GLTP-fold, lipi | 100.0 |
| >3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-60 Score=394.71 Aligned_cols=190 Identities=24% Similarity=0.430 Sum_probs=180.1
Q ss_pred CCCCchhhHHhccccccC---CCCcChHHHHHHHHHHHHHHHhhcc-hhHHHHHhHhhhHHHHHHHhhcCchhhhhHHHH
Q 045817 2 EGTAFSPSLEGMKHVKSE---QGEMLTKPFLEVCKLILPVLDKFGA-AMSLVKSDIGGNITRLENKYLSDPEKYKNLYSM 77 (202)
Q Consensus 2 ~~~~~~~~~~~f~~~~~~---~~~i~~~~fl~a~~~l~~~~d~lG~-~f~~v~~Dv~~ni~~l~~~~~~~~~~~~tl~~~ 77 (202)
+||||+++..+|.+|+.+ +++|+|.+||++|++|++|||+||+ +|+||++||.|||++|++++.++|++|.||++|
T Consensus 13 ~~tff~~~~~~F~~~~~~~~~~~~I~t~~fL~a~~~l~~~fd~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL~~m 92 (209)
T 3kv0_A 13 GATFLETFXXSFVDVPIDAEXGNAISTAEFLEAAESLTTMFDVLGSIAFSPVXTDMLGNVEXIRXRMLAAPLESQNIQDL 92 (209)
T ss_dssp --CGGGGCSSCGGGCCEEGGGTSEEBHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSGGGCSBHHHH
T ss_pred CCccHHHHHhhHHhCCCccccCCCccHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHhHHHHHHHhhcCchhhchHHHH
Confidence 789999999999999976 8899999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCccchhHHHHHHHHHHHHHHHHHhhcCCCCChhhHHHHHHHHHhhhhcchhhHHHHHHHhhhCCChH
Q 045817 78 VGEEVEAKTAKRSSSCTNGLLWLTRAMDFLVELFRNLLAHPDWTMPQVCTDSYSKTLKKFHGWIASSSFTVAMKLAPDRK 157 (202)
Q Consensus 78 v~~E~~~~~~~~~~s~sr~LLwL~R~L~Fi~~~l~~l~~~~~~~~~~~a~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~ 157 (202)
|++|++++ ..||+|+||||||||+|++.||+++. +++.+++.+|++||++||+|||||+||++|++||+++|+|+
T Consensus 93 v~~E~~~~----~~S~tr~LLwL~RaL~fi~~~l~~l~-~~~~~l~~~~~~AY~~tL~~yHgw~vr~af~~A~~a~P~R~ 167 (209)
T 3kv0_A 93 VRNELXTX----SHTATEGLLWLVRGLEFTCIALSXNI-GSTEELADSFRGSYRVTLXPHHSFLVXPIFSAAMSACPYRX 167 (209)
T ss_dssp HHHHTCC-----CCHHHHHHHHHHHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHTTGGGSCTTTHHHHHHHHHTCCCHH
T ss_pred HHHHHHhc----ccchHHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhCCcHH
Confidence 99999874 67899999999999999999999999 77779999999999999999999999999999999999999
Q ss_pred HHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 045817 158 KFMEVIGGS-GDVNSDMDKFCTAFAPLLEENHKFLASVGM 196 (202)
Q Consensus 158 ~fl~~l~~~-~~~~~~~~~~~~~l~~~~~~i~~~~~~~~l 196 (202)
+|+++++++ +++.++|++++.++++++++|+++|+++|.
T Consensus 168 ~fl~~l~~~~~~~~~~L~~~l~al~~v~~~i~~~~~~~~~ 207 (209)
T 3kv0_A 168 DFYAXLGDDEQXVQEELREYLVALDXIVNILXRFLESXEA 207 (209)
T ss_dssp HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGG
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999876 458999999999999999999999999874
|
| >2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A | Back alignment and structure |
|---|
| >3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 202 | ||||
| d1swxa_ | 202 | a.224.1.1 (A:) Glycolipid transfer protein, GLTP { | 9e-57 |
| >d1swxa_ a.224.1.1 (A:) Glycolipid transfer protein, GLTP {Human (Homo sapiens) [TaxId: 9606]} Length = 202 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Glycolipid transfer protein, GLTP superfamily: Glycolipid transfer protein, GLTP family: Glycolipid transfer protein, GLTP domain: Glycolipid transfer protein, GLTP species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (447), Expect = 9e-57
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 12/192 (6%)
Query: 19 EQGEMLTKPFLEVCKLILPVLDKFG-AAMSLVKSDIGGNITRLENKYLSDPEKYKNLYSM 77
++ T PFLE + P D G + +K+DI GNIT+++ Y ++P K++ L ++
Sbjct: 7 ADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNI 66
Query: 78 VGEEVEAKTAK-RSSSCTNGLLWLTRAMDFLVELFRNLLAHPD-----WTMPQVCTDSYS 131
+ E E A+ T L+WL R + F+ +++ + T +Y
Sbjct: 67 LEVEKEMYGAEWPKVGATLALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYE 126
Query: 132 KTLKKFHGWIASSSFTVAMKLAPDRKKFMEVIGGSGD-----VNSDMDKFCTAFAPLLEE 186
LKK+HGWI F A+ AP + F++ + + + F + ++
Sbjct: 127 MALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVTEEECLEKIRLFLVNYTATIDV 186
Query: 187 NHKFLASVGMDD 198
++ + +
Sbjct: 187 IYEMYTQMNAEL 198
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 202 | |||
| d1swxa_ | 202 | Glycolipid transfer protein, GLTP {Human (Homo sap | 100.0 |
| >d1swxa_ a.224.1.1 (A:) Glycolipid transfer protein, GLTP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Glycolipid transfer protein, GLTP superfamily: Glycolipid transfer protein, GLTP family: Glycolipid transfer protein, GLTP domain: Glycolipid transfer protein, GLTP species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-57 Score=374.79 Aligned_cols=183 Identities=23% Similarity=0.459 Sum_probs=169.3
Q ss_pred cCCCCcChHHHHHHHHHHHHHHHhhcc-hhHHHHHhHhhhHHHHHHHhhcCchhhhhHHHHHHHHHHhcCCCC-CCccch
Q 045817 18 SEQGEMLTKPFLEVCKLILPVLDKFGA-AMSLVKSDIGGNITRLENKYLSDPEKYKNLYSMVGEEVEAKTAKR-SSSCTN 95 (202)
Q Consensus 18 ~~~~~i~~~~fl~a~~~l~~~~d~lG~-~f~~v~~Dv~~ni~~l~~~~~~~~~~~~tl~~~v~~E~~~~~~~~-~~s~sr 95 (202)
++|++|+|++||+||++|++|||+||+ +|+||++||.|||++|+++++++|++|.||++||++|++.|..+. .+||++
T Consensus 6 ~~d~~i~t~~fL~a~~~i~~~~~~lG~~~F~~v~~Dv~gnI~kl~~~~~~~~~~~~tL~~mv~~E~~~~~~k~~~~s~t~ 85 (202)
T d1swxa_ 6 PADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATL 85 (202)
T ss_dssp CTTCCCBHHHHHHHHTTSGGGGGTTSSCSSHHHHHHHHHHHHHHHHHHHHCTTTTSBHHHHHHHHHHHHGGGTTSSHHHH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHcCcHHhhHHHHHHHHHHHhccccCCCCchHH
Confidence 457899999999999999999999995 999999999999999999999999999999999999999887654 578999
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCC-----ChhhHHHHHHHHHhhhhcchhhHHHHHHHhhhCCChHHHHHHhcCCC---
Q 045817 96 GLLWLTRAMDFLVELFRNLLAHPDW-----TMPQVCTDSYSKTLKKFHGWIASSSFTVAMKLAPDRKKFMEVIGGSG--- 167 (202)
Q Consensus 96 ~LLwL~R~L~Fi~~~l~~l~~~~~~-----~~~~~a~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~~fl~~l~~~~--- 167 (202)
+||||||||+|++.||+++.+++++ +++.+|++||++||+|||||+||++|++||+++|+|++|+++|+.++
T Consensus 86 ~LLwL~RaL~Fi~~fl~~l~~~~~~~~~~~~l~~~~~~AY~~tL~~yH~w~vr~~~~~A~~~~P~R~~fl~~l~~~~~~~ 165 (202)
T d1swxa_ 86 ALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQNVT 165 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCTTSTTCCHHHHHHHHHHHTGGGCCHHHHHHHHHHHHTCCCHHHHHHHHTC----C
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCCCHHHHHHHHccCCchh
Confidence 9999999999999999999987543 48999999999999999999999999999999999999999998642
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 045817 168 --DVNSDMDKFCTAFAPLLEENHKFLASVGMDDLK 200 (202)
Q Consensus 168 --~~~~~~~~~~~~l~~~~~~i~~~~~~~~l~~~~ 200 (202)
++.++|++++.++++++++|+++|+++||++.+
T Consensus 166 ~~~~~~~l~~~~~~~~~~~~~i~~ly~~~~L~~~~ 200 (202)
T d1swxa_ 166 EEECLEKIRLFLVNYTATIDVIYEMYTQMNAELNY 200 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 367889999999999999999999999999764
|