Citrus Sinensis ID: 045858

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130------
Protein Sequence
MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEccccccccccccc
Coil and Loop (DISEMBL)
mglalalpsraqdlpqdYVNAHNAARaqvgvnpvkcdESIAAFARSYANRrygenlagssgnlsgsdavglwvsekadydynsnscnagkvcgHYTHVVWRNSVRIGCAkvrcnnggtfvgcnyaspgdvvgqkpy
Flexible Loop (DISEMBL)
MGLALALPSRAQDLPQDYVNAHNAARAqvgvnpvkCDESIAAFARSYANRRYGEnlagssgnlsgSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNggtfvgcnyaspgdvvgqkpy
Low Complexity Region (SEG)
MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYgenlagssgnlsgsDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY
Disordered region (IsUnstruct)
******************VNAHNAARAQVGVNPVKCDESIAAFARSYANRRYGENL********GSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYAS**********
Disordered Region (DISOPRED)
**LA********DLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY
Disordered Region (DISEMBL)
MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY
Disordered Region (DISPRO)
MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQK**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	136	2.2.26 [Sep-21-2011]
P33154	161	Pathogenesis-related prot	no	no	0.963	0.813	0.593	3e-42
Q41359	167	Pathogenesis-related prot	N/A	no	0.941	0.766	0.598	2e-41
P11670	177	Basic form of pathogenesi	N/A	no	0.963	0.740	0.555	3e-39
P07053	168	Pathogenesis-related prot	N/A	no	1.0	0.809	0.510	2e-38
P09042	168	Pathogenesis-related prot	N/A	no	1.0	0.809	0.503	1e-37
P08299	168	Pathogenesis-related prot	N/A	no	0.933	0.755	0.528	1e-36
Q04108	159	Pathogenesis-related leaf	N/A	no	1.0	0.855	0.520	1e-36
Q05968	164	Pathogenesis-related prot	N/A	no	0.941	0.780	0.559	2e-35
P04284	159	Pathogenesis-related leaf	N/A	no	1.0	0.855	0.506	5e-35
Q08697	175	Pathogenesis-related prot	N/A	no	0.933	0.725	0.503	2e-34

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score =  170 bits (430), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 86/145 (59%), Positives = 103/145 (71%), Gaps = 14/145 (9%)

Query: 4   ALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------ 51
           AL LPS+AQD PQDY+  HN AR  VGV P++ DE +AA+ARSYA +             
Sbjct: 19  ALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGP 78

Query: 52  YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKV 111
           YGENLA  SG+LSG  AV +WVSEKA+Y+Y +N+CN   VCGHYT VVWR SVR+GCAKV
Sbjct: 79  YGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVVWRKSVRLGCAKV 136

Query: 112 RCNNGGTFVGCNYASPGDVVGQKPY 136
           RCNNGGT + CNY   G+ V +KPY
Sbjct: 137 RCNNGGTIISCNYDPRGNYVNEKPY 161

Partially responsible for acquired pathogen resistance.
Arabidopsis thaliana (taxid: 3702)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score =  167 bits (422), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/142 (59%), Positives = 103/142 (72%), Gaps = 14/142 (9%)

Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYA-------------NRRYGEN 55
           S AQ+ PQDYV+AHNAAR+ V V PV  DES+AAFAR YA             + RYGEN
Sbjct: 26  SVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHSGDPRYGEN 85

Query: 56  LAGSSG-NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCN 114
           LA  SG  L+G +AV +WV+E+ DY+ N+N+C  GKVCGHYT VVWRNSVRIGCA+VRCN
Sbjct: 86  LAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGCARVRCN 145

Query: 115 NGGTFVGCNYASPGDVVGQKPY 136
           NG  F+ CNY+ PG+  GQ+PY
Sbjct: 146 NGAWFITCNYSPPGNYAGQRPY 167

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

>sp|P11670|PRB1_TOBAC Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/144 (55%), Positives = 100/144 (69%), Gaps = 13/144 (9%)

Query: 5   LALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------Y 52
           L   S+AQ+ PQDY+N HNAAR QVGV P+  D  +AA+A++YAN+R            Y
Sbjct: 17  LIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPY 76

Query: 53  GENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVR 112
           GENLA +   L+ + AV +WV EK  YDYNSNSC  G VCGHYT VVWRNSVR+GCA+VR
Sbjct: 77  GENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSC-VGGVCGHYTQVVWRNSVRLGCARVR 135

Query: 113 CNNGGTFVGCNYASPGDVVGQKPY 136
            NNG  F+ CNY  PG+ +GQ+P+
Sbjct: 136 SNNGWFFITCNYDPPGNFIGQRPF 159

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 76/149 (51%), Positives = 104/149 (69%), Gaps = 13/149 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANR---------- 50
           + L ++  S AQ+  QDY++AHN ARA VGV P+  D  +AA+A++Y ++          
Sbjct: 20  LFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHS 79

Query: 51  --RYGENLAGSSGN-LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIG 107
             +YGENLA  SG+ ++ + AV +WV EK  YD++SN+C  G+VCGHYT VVWRNSVR+G
Sbjct: 80  HGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVG 139

Query: 108 CAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           CA+V+CNNGG  V CNY  PG+V+GQ PY
Sbjct: 140 CARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/149 (50%), Positives = 105/149 (70%), Gaps = 13/149 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANR---------- 50
           + L ++    AQ+  QDY++AHN ARA VGV P+  D+ +AA+A++YA++          
Sbjct: 20  LFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHS 79

Query: 51  --RYGENLAGSSGN-LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIG 107
             +YGENLA  SG+ L+ + AV +WV+EK  Y ++SN+C  G+VCGHYT VVWRNSVR+G
Sbjct: 80  HGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQVVWRNSVRVG 139

Query: 108 CAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           CA+V+CNNGG  V CNY  PG+V+G+ PY
Sbjct: 140 CARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score =  151 bits (382), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 13/140 (9%)

Query: 10  RAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANR------------RYGENLA 57
           RAQ+  QDY++AHN ARA VGV P+  D+ +AA+A++YA++            +YGENLA
Sbjct: 29  RAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLA 88

Query: 58  GSSGN-LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG 116
             SG+ ++ + AV +WV EK  YD++SN+C  G+VCGHYT VVWRNSVR+GCA+V+CNNG
Sbjct: 89  EGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGCARVQCNNG 148

Query: 117 GTFVGCNYASPGDVVGQKPY 136
           G  V CNY  PG+  G+ PY
Sbjct: 149 GYVVSCNYDPPGNYRGESPY 168

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q04108|PR04_SOLLC Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1

 Score =  151 bits (381), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 76/146 (52%), Positives = 97/146 (66%), Gaps = 10/146 (6%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYG------- 53
           M LA+     AQ+ PQDY+  HN ARAQVGV P+  D ++A+ A++YAN R G       
Sbjct: 14  MVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS 73

Query: 54  ---ENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAK 110
              ENLA   G+ +G  AV LWVSE+ DY+Y +N C  GK+CGHYT VVWRNSVR+GC +
Sbjct: 74  GAGENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGR 133

Query: 111 VRCNNGGTFVGCNYASPGDVVGQKPY 136
            RCNNG  F+ CNY   G+ VG++PY
Sbjct: 134 ARCNNGWWFISCNYDPVGNWVGERPY 159

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 80/143 (55%), Positives = 97/143 (67%), Gaps = 15/143 (10%)

Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------YGENL 56
           S+AQ+ PQDYV+ HNAAR+ VGV  V     + AFA++YAN+R            YGEN+
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 57  A-GSSG-NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCN 114
             GS+G +   SDAV  WVSEK DYDY SN+C AGKVCGHYT VVWR S  IGCA+V CN
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGCARVVCN 141

Query: 115 NG-GTFVGCNYASPGDVVGQKPY 136
           N  G F+ CNY   G+++GQKPY
Sbjct: 142 NNRGVFITCNYEPRGNIIGQKPY 164

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P04284|PR06_SOLLC Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 74/146 (50%), Positives = 94/146 (64%), Gaps = 10/146 (6%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYG------- 53
           M LA+     AQ+ PQDY+  HN ARAQVGV P+  D ++A+ A++YAN R G       
Sbjct: 14  MVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS 73

Query: 54  ---ENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAK 110
              ENLA   G+ +G  AV LWVSE+  Y+Y +N C  GK C HYT VVWRNSVR+GC +
Sbjct: 74  GAGENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGR 133

Query: 111 VRCNNGGTFVGCNYASPGDVVGQKPY 136
            RCNNG  F+ CNY   G+ +GQ+PY
Sbjct: 134 ARCNNGWWFISCNYDPVGNWIGQRPY 159

Probably involved in the defense reaction of plants against pathogens. Has antifungal activity.

Solanum lycopersicum (taxid: 4081)

>sp|Q08697|PR1A_SOLLC Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1

 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/147 (50%), Positives = 97/147 (65%), Gaps = 20/147 (13%)

Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------YGENL 56
           S+AQ   ++++NAHNAAR +VGV P+  D+ +AA+A++YAN+R            YGENL
Sbjct: 19  SQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENL 78

Query: 57  AGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG 116
           A +   L+ + AV +W  EK  YDYNSN+C  GKVCGHYT VVWR SVR+GCA+VRCN+G
Sbjct: 79  AAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSG 138

Query: 117 GTFVGCNYASP--------GDVVGQKP 135
             F+ CNY  P        GD+  QKP
Sbjct: 139 WVFITCNYDPPGNYIDNVYGDLEEQKP 165

Probably involved in the defense reaction of plants against pathogens.

Solanum lycopersicum (taxid: 4081)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
224105801	161	predicted protein [Populus trichocarpa]	1.0	0.844	0.628	7e-48
224105795	161	predicted protein [Populus trichocarpa]	1.0	0.844	0.635	8e-48
224100397	161	predicted protein [Populus trichocarpa]	1.0	0.844	0.628	1e-47
224150051	161	predicted protein [Populus trichocarpa]	1.0	0.844	0.628	2e-47
389620134	165	pathogenesis related protein 1 isoform 1	1.0	0.824	0.621	3e-46
388540036	153	pathogenesis related protein 1a, partial	1.0	0.888	0.608	2e-45
359744024	161	pathogensis-related protein 1a, partial	1.0	0.844	0.614	6e-45
392507623	154	pathogenesis related protein 1a, partial	0.970	0.857	0.618	7e-45
392507599	153	pathogenesis related protein 1a, partial	1.0	0.888	0.594	2e-44
255562124	162	STS14 protein precursor, putative [Ricin	1.0	0.839	0.567	4e-44

>gi|224105801|ref|XP_002313935.1| predicted protein [Populus trichocarpa] gi|222850343|gb|EEE87890.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (494), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           + L+L LPSRAQD PQDY++AHN ARA VGV P+  D ++ A+A++YAN+R         
Sbjct: 14  ITLSLILPSRAQDNPQDYLDAHNTARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLIHS 73

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGEN+A SS +LSG+DAV +WV EKA YDYNSNSC AG+ CGHYT VVWRNS R+GC
Sbjct: 74  GGPYGENIAWSSADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGC 133

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKV+C+ GGTF+GCNY  PG+VVGQKPY
Sbjct: 134 AKVKCSTGGTFIGCNYDPPGNVVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224105795|ref|XP_002313934.1| predicted protein [Populus trichocarpa] gi|222850342|gb|EEE87889.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (494), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/148 (63%), Positives = 114/148 (77%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           + L+L LPSRAQD PQDY++AHNAARA VGV P+  D ++ A+A++YAN+R         
Sbjct: 14  ITLSLILPSRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLIHS 73

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGENLA SS +LSG+DAV +WV EKA YDYNSNSC AG+ CGHYT VVWRNS R+GC
Sbjct: 74  GGPYGENLAWSSADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGC 133

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKV+C+ GGTF+GCNY  PG+ VGQKPY
Sbjct: 134 AKVKCSTGGTFIGCNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100397|ref|XP_002334377.1| predicted protein [Populus trichocarpa] gi|118485875|gb|ABK94784.1| unknown [Populus trichocarpa] gi|118488561|gb|ABK96093.1| unknown [Populus trichocarpa] gi|222871723|gb|EEF08854.1| predicted protein [Populus trichocarpa]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           + L+L LPSRAQD PQDY++AHNAARA VGV P+  D ++ A+A++YAN+R         
Sbjct: 14  ITLSLILPSRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLVHS 73

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGEN+A SS +LSG+DAV +WV EKA YDYNSNSC AG+ CGHYT VVWRNS R+GC
Sbjct: 74  GGPYGENIAWSSADLSGTDAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGC 133

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKV+C+ GGTF+GCNY  PG+ VGQKPY
Sbjct: 134 AKVKCSTGGTFIGCNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224150051|ref|XP_002336902.1| predicted protein [Populus trichocarpa] gi|222837091|gb|EEE75470.1| predicted protein [Populus trichocarpa]

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/148 (62%), Positives = 114/148 (77%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           + L+L LPSRAQD PQDY++AHNAARA VGV P+  D ++ A+A++YAN+R         
Sbjct: 14  ITLSLILPSRAQDNPQDYLDAHNAARAAVGVGPLTWDTTVQAYAQNYANQRAGDCNLVHS 73

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGEN+A SS +LSG+DAV +WV EKA YDYNSNSC AG+ CGHYT VVWRNS R+GC
Sbjct: 74  GGPYGENIAWSSADLSGADAVKMWVDEKAYYDYNSNSCAAGQQCGHYTQVVWRNSARLGC 133

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKV+C+ GGTF+GCNY  PG+ VGQKPY
Sbjct: 134 AKVKCSTGGTFIGCNYDPPGNYVGQKPY 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|389620134|gb|AFK93500.1| pathogenesis related protein 1 isoform 1 [Ficus pumila var. awkeotsang]

 Score =  189 bits (480), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 92/148 (62%), Positives = 114/148 (77%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           +GLA    S AQD PQD+VNAH++AR +VGV  +  D+++A++A+ YAN           
Sbjct: 18  IGLATLQASNAQDSPQDFVNAHSSARGEVGVGAITWDDTVASYAQQYANSHIGDCNMVHS 77

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGENLA SSG+LSG+DAV +WV+EKA+Y+YNSNSC +GKVCGHYT VVWR SVR+GC
Sbjct: 78  GGPYGENLAWSSGDLSGTDAVRMWVNEKANYNYNSNSCASGKVCGHYTQVVWRKSVRLGC 137

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKVRCNNGGTF+GCNY  PG+ VGQKPY
Sbjct: 138 AKVRCNNGGTFIGCNYDPPGNYVGQKPY 165

Source: Ficus pumila var. awkeotsang

Species: Ficus pumila

Genus: Ficus

Family: Moraceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388540036|gb|AFK64734.1| pathogenesis related protein 1a, partial [Cydonia oblonga]

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 90/148 (60%), Positives = 112/148 (75%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           +G  L   S AQD PQDY+N+HNAARA VGV P+  D+++A +A++YAN+          
Sbjct: 6   LGSVLIQSSHAQDAPQDYLNSHNAARAAVGVGPLTWDDNVAGYAQNYANQHVGDCNLVHS 65

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGENLA S+G++SG+ AV +WV+EKADYDY SNSC  GKVCGHYT VVWRNS R+GC
Sbjct: 66  GGPYGENLAMSTGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSARVGC 125

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKVRC++GGTF+GCNY  PG+ VGQKPY
Sbjct: 126 AKVRCSSGGTFIGCNYDPPGNYVGQKPY 153

Source: Cydonia oblonga

Species: Cydonia oblonga

Genus: Cydonia

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359744024|gb|AEV57468.1| pathogensis-related protein 1a, partial [Prunus persica]

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 111/148 (75%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           +GLAL   + AQD PQDY+NAHNAARAQVGV P+  D ++ A+A+ YAN R         
Sbjct: 14  IGLALLQSTGAQDSPQDYLNAHNAARAQVGVAPLTWDPNLVAYAQRYANSRAGDCNLVHS 73

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGEN+A S+G+LSG+ AV L+V EK DYDYNSN+C AGK+CGHYT VVWRNSVR+GC
Sbjct: 74  NGPYGENIAKSTGDLSGTAAVNLFVGEKPDYDYNSNTCAAGKMCGHYTQVVWRNSVRLGC 133

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AK RC NGGTF+GCNY   G++ GQ+PY
Sbjct: 134 AKARCTNGGTFIGCNYDPRGNIRGQRPY 161

Source: Prunus persica

Species: Prunus persica

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|392507623|gb|AFM77011.1| pathogenesis related protein 1a, partial [Cydonia oblonga]

 Score =  185 bits (469), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 89/144 (61%), Positives = 109/144 (75%), Gaps = 12/144 (8%)

Query: 5   LALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------Y 52
           L   S AQD PQDY+N+HNAARA VGV P+  D+ +A +A++YAN+             Y
Sbjct: 11  LIQSSHAQDTPQDYLNSHNAARAAVGVGPLTWDDKVAGYAQNYANQHVGDCNLVHSGGPY 70

Query: 53  GENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVR 112
           GENLA S+G++SG+ AV +WV+EKADYDY SNSC  GKVCGHYT VVWRNS R+GCAKVR
Sbjct: 71  GENLAMSTGDMSGTAAVDMWVAEKADYDYESNSCADGKVCGHYTQVVWRNSARVGCAKVR 130

Query: 113 CNNGGTFVGCNYASPGDVVGQKPY 136
           C++GGTF+GCNY  PG+ VGQKPY
Sbjct: 131 CSSGGTFIGCNYDPPGNYVGQKPY 154

Source: Cydonia oblonga

Species: Cydonia oblonga

Genus: Cydonia

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|392507599|gb|AFM76999.1| pathogenesis related protein 1a, partial [Pyrus communis]

 Score =  183 bits (465), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 88/148 (59%), Positives = 111/148 (75%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           +G  L   S AQD PQDY+N+HN ARA VGV P+  D+++A +A++YAN+          
Sbjct: 6   LGSVLIQSSHAQDTPQDYLNSHNTARAAVGVGPLTWDDNVAGYAQNYANQHVGDCSLVHS 65

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGENLA S+G++SG+ AV LWV+EKADY+Y SNSC  GKVCGHYT VVWRNS R+GC
Sbjct: 66  GGPYGENLAMSTGDMSGTAAVDLWVAEKADYNYESNSCADGKVCGHYTQVVWRNSARVGC 125

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKVRC++GGTF+GCNY  PG+ VG+KPY
Sbjct: 126 AKVRCSSGGTFIGCNYDPPGNYVGEKPY 153

Source: Pyrus communis

Species: Pyrus communis

Genus: Pyrus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562124|ref|XP_002522070.1| STS14 protein precursor, putative [Ricinus communis] gi|223538669|gb|EEF40270.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  182 bits (462), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 110/148 (74%), Gaps = 12/148 (8%)

Query: 1   MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
           + +AL   S AQD  QDY+NAHN+AR  VG+ P+  D+ +A++A+ +AN+          
Sbjct: 14  ISIALIFSSHAQDTQQDYLNAHNSARGDVGLGPLTWDDKVASYAQHHANQHKSDCSLVHS 73

Query: 52  ---YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
              YGENLA SSG+LSG+DAV +W+ EK  YDYNSNSC +G++CGHYT VVWR+SVR+GC
Sbjct: 74  EGPYGENLAWSSGDLSGTDAVKMWIDEKPYYDYNSNSCASGQICGHYTQVVWRSSVRLGC 133

Query: 109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           AKV CNNGGTF+GCNY  PG+ +GQ+PY
Sbjct: 134 AKVSCNNGGTFIGCNYDPPGNYIGQRPY 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	136
TAIR|locus:2055240	161	PRB1 "AT2G14580" [Arabidopsis	0.963	0.813	0.537	7e-38
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.963	0.813	0.537	5.7e-36
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.985	0.822	0.506	4e-35
TAIR|locus:2180662	166	AT5G26130 "AT5G26130" [Arabido	0.985	0.807	0.479	7.7e-32
TAIR|locus:2091196	161	AT3G19690 "AT3G19690" [Arabido	1.0	0.844	0.44	1.6e-31
TAIR|locus:2134283	166	AT4G33710 "AT4G33710" [Arabido	0.985	0.807	0.472	5.4e-31
TAIR|locus:2031055	161	AT1G50060 "AT1G50060" [Arabido	0.970	0.819	0.468	7.1e-29
TAIR|locus:2031060	226	AT1G50050 "AT1G50050" [Arabido	0.955	0.575	0.444	1.5e-26
TAIR|locus:2126169	160	AT4G07820 "AT4G07820" [Arabido	0.992	0.843	0.380	3.2e-26
TAIR|locus:2134193	172	AT4G33730 "AT4G33730" [Arabido	0.926	0.732	0.414	1.1e-25

TAIR|locus:2055240 PRB1 "AT2G14580" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 78/145 (53%), Positives = 97/145 (66%)

Query:     4 ALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------ 51
             AL +P +AQD  QDYVNAHN AR+Q+GV P++ DE +AA+AR+YAN+             
Sbjct:    19 ALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGP 78

Query:    52 YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKV 111
             Y               AV LWV+EKA+Y+Y++N+CN   VCGHYT VVWRNSVR+GCAKV
Sbjct:    79 YGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNG--VCGHYTQVVWRNSVRLGCAKV 136

Query:   112 RCNNGGTFVGCNYASPGDVVGQKPY 136
             RCNNGGT + CNY  PG+   QKPY
Sbjct:   137 RCNNGGTIISCNYDPPGNYANQKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0009723 "response to ethylene stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
 Identities = 78/145 (53%), Positives = 93/145 (64%)

Query:     4 ALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYA-----NRR------- 51
             AL LPS+AQD PQDY+  HN AR  VGV P++ DE +AA+ARSYA     N R       
Sbjct:    19 ALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGP 78

Query:    52 YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKV 111
             Y               AV +WVSEKA+Y+Y +N+CN   VCGHYT VVWR SVR+GCAKV
Sbjct:    79 YGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNG--VCGHYTQVVWRKSVRLGCAKV 136

Query:   112 RCNNGGTFVGCNYASPGDVVGQKPY 136
             RCNNGGT + CNY   G+ V +KPY
Sbjct:   137 RCNNGGTIISCNYDPRGNYVNEKPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 74/146 (50%), Positives = 93/146 (63%)

Query:     3 LALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------- 51
             L L +  +AQD PQD++  HN ARA+VGV P++ DE +AA+AR+YAN+R           
Sbjct:    18 LVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSG 77

Query:    52 -YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAK 110
              Y               AV +WV E+ DYDY+SN+C   K CGHYT VVWRNS R+GCAK
Sbjct:    78 SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAK 137

Query:   111 VRCNNGGTFVGCNYASPGDVVGQKPY 136
             VRCNNG TF+ CNY  PG+ VG+ PY
Sbjct:   138 VRCNNGQTFITCNYDPPGNWVGEWPY 163

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180662 AT5G26130 "AT5G26130" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 71/148 (47%), Positives = 89/148 (60%)

Query:     3 LALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------- 51
             LA A+P +AQD PQDY++ HN AR QVGV P+K       +A +YA +R           
Sbjct:    19 LAFAVPLKAQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGDCSLTHSNS 78

Query:    52 ---YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
                Y              +AV LWV+EK+DY Y SN+C+ GK CGHYT VVWR S  +GC
Sbjct:    79 NGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVWRTSEWVGC 138

Query:   109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
             AKV+C+NGGTFV CNY  PG+  G+ PY
Sbjct:   139 AKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091196 AT3G19690 "AT3G19690" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 66/150 (44%), Positives = 94/150 (62%)

Query:     1 MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
             + +AL   S A+DL Q ++ AHN AR +VG++P+  D+ +AA+A SYAN+R         
Sbjct:    12 LAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHS 71

Query:    52 ---YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNA--GKVCGHYTHVVWRNSVRI 106
                +              DA  +W++EK  YDY+SN+CN   G  C HYT VVW+N+VR+
Sbjct:    72 NGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRL 131

Query:   107 GCAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
             GCAKV CN+GGTF+ CNY  PG+ +G+KP+
Sbjct:   132 GCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134283 AT4G33710 "AT4G33710" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 70/148 (47%), Positives = 88/148 (59%)

Query:     3 LALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------- 51
             LA A+P +AQD  QDY++ HN AR  V V  +K     A +A +YA RR           
Sbjct:    19 LAFAVPLKAQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYAWNYAQRRKRDCRLIHSNS 78

Query:    52 ---YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGC 108
                Y               AV LWV EK+DY + SN+C AGK CGHYT VVW+NS  +GC
Sbjct:    79 RGRYGENLAWSSGDMSGAAAVRLWVREKSDYFHKSNTCRAGKQCGHYTQVVWKNSEWVGC 138

Query:   109 AKVRCNNGGTFVGCNYASPGDVVGQKPY 136
             AKV+C+NGGTFV CNY+ PG+V G++PY
Sbjct:   139 AKVKCDNGGTFVTCNYSHPGNVRGRRPY 166

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031055 AT1G50060 "AT1G50060" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 68/145 (46%), Positives = 85/145 (58%)

Query:     5 LALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------Y 52
             L + + AQ+ PQDY+N+HN ARAQVGV  V  D ++AA+A +Y+N R            Y
Sbjct:    17 LVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPY 76

Query:    53 XXXXXXXXXXXXXX-DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKV 111
                             AV LWV EK  Y Y  N+C  GK C HYT VVWR+SV+IGCA+V
Sbjct:    77 GENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARV 136

Query:   112 RCNNGGTFVGCNYASPGDVVGQKPY 136
             +C N   FV CNY SPG+ VG+ PY
Sbjct:   137 QCTNTWWFVSCNYNSPGNWVGEYPY 161

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031060 AT1G50050 "AT1G50050" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 64/144 (44%), Positives = 81/144 (56%)

Query:     5 LALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRRYXXXXXXXXXXXX 64
             L L + AQ+  QDY+N HN ARAQVGV  V  D  +AA+A +YAN R             
Sbjct:    17 LVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGGS 76

Query:    65 XXD--------------AVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAK 110
               +              AV LWV+EK  Y+Y +N+C   + C HYT VVW NSV+IGCA+
Sbjct:    77 YGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSNSVKIGCAR 136

Query:   111 VRCNNGGTFVGCNYASPGDVVGQK 134
             V CNNGG FVGCNY +   +  +K
Sbjct:   137 VLCNNGGYFVGCNYDASAALKSRK 160

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2126169 AT4G07820 "AT4G07820" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/147 (38%), Positives = 88/147 (59%)

Query:     1 MGLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR--------- 51
             + L+ ++P +AQD PQDY NAHN AR  VGV+P+   +++ A+A++YA +R         
Sbjct:    15 LALSFSVPLKAQDQPQDYFNAHNRARVSVGVSPLMWSQTLTAYAQAYAEKRRDCGLFLSG 74

Query:    52 --YXXXXXXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCA 109
               Y              + V  ++++K+DYDY +N+C AGK C  Y  V++R SV +GCA
Sbjct:    75 GPYGETIKADIIDFSAEEFVSTFLNQKSDYDYTTNTCRAGKSCDGYKQVLFRKSVFLGCA 134

Query:   110 KVRCNNGGTFVGCNYASPGDVVGQKPY 136
             KV+CNNGG    C+Y  P  ++ ++P+
Sbjct:   135 KVKCNNGGFLAICSY-DPSVILSERPF 160

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

TAIR|locus:2134193 AT4G33730 "AT4G33730" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 58/140 (41%), Positives = 75/140 (53%)

Query:    10 RAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR-------------YXXXX 56
             ++ + P  Y+  HNAARA V V P++ D  IA  A+ YAN               Y    
Sbjct:    34 QSHEYPDSYLRPHNAARAAVKVKPLRWDFGIATVAQDYANHLASGPCSLEHSSGPYGENL 93

Query:    57 XXXXXXXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG 116
                        AV +WV EK+ YD+ SNSC+ G  CGHYT VVWR S R+GC K +CNNG
Sbjct:    94 AFGSGDMSAAQAVAMWVHEKSYYDFYSNSCH-GPACGHYTQVVWRGSARLGCGKAKCNNG 152

Query:   117 GTFVGCNYASPGDVVGQKPY 136
              + V CNY   G+ +G +PY
Sbjct:   153 ASIVVCNYDPAGNYIGARPY 172

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P09042	PR1C_TOBAC	No assigned EC number	0.5033	1.0	0.8095	N/A	no
Q04108	PR04_SOLLC	No assigned EC number	0.5205	1.0	0.8553	N/A	no
P04284	PR06_SOLLC	No assigned EC number	0.5068	1.0	0.8553	N/A	no
P35793	PR13_HORVU	No assigned EC number	0.5562	1.0	0.8292	N/A	no
P07053	PR1B_TOBAC	No assigned EC number	0.5100	1.0	0.8095	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0001072301 hypothetical protein (162 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	136
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	4e-60
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	7e-31
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	2e-30
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	4e-27
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	5e-26
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	1e-25
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	4e-23
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	2e-21
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	3e-13
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	4e-13
COG2340	207	COG2340, COG2340, Uncharacterized protein with SCP	2e-06

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  181 bits (461), Expect = 4e-60
 Identities = 79/136 (58%), Positives = 101/136 (74%), Gaps = 14/136 (10%)

Query: 15  PQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------YGENLA-GSSG 61
           PQD+++AHNAARA VGV P+K D+++AA+A+ YAN+R            YGENL  GS G
Sbjct: 1   PQDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGG 60

Query: 62  NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN-GGTFV 120
           N S +DAV  WVSEK  YDY+SN+C AGK+CGHYT VVWRN+ R+GCA+V C+N GG F+
Sbjct: 61  NWSAADAVASWVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFI 120

Query: 121 GCNYASPGDVVGQKPY 136
            CNY  PG+ +GQ+PY
Sbjct: 121 ICNYDPPGNYIGQRPY 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score =  107 bits (268), Expect = 7e-31
 Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 30/140 (21%)

Query: 15  PQDYVNAHNAARAQVG-----------VNPVKCDESIAAFARSYAN----------RRYG 53
            Q+ ++AHN  R+QV            +  +  D  +A+ A+++AN            YG
Sbjct: 3   QQEILDAHNKLRSQVAGGFLAAPAASNMLKLTWDCELASSAQNWANQCPFGHSTPRPGYG 62

Query: 54  ENLAGSSGNL-----SGSDAVGLWVSEKADYDYNSNSCN-AGKVCGHYTHVVWRNSVRIG 107
           ENLA  S +        S AV LW  E  DY Y+SN+C       GHYT VVW  + ++G
Sbjct: 63  ENLAWWSSSTALPDTYASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVG 122

Query: 108 CAKVRCNNGG---TFVGCNY 124
           C    C +G    T V CNY
Sbjct: 123 CGVANCPDGTKKKTVVVCNY 142

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score =  105 bits (264), Expect = 2e-30
 Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 15/123 (12%)

Query: 15  PQDYVNAHNAARAQV-GVNPVKCDESIAAFARSYANR------------RYGENLAGSSG 61
            Q+ V  HN+ RA+V G+ P+  D  +A  A++YANR              GENLA  S 
Sbjct: 1   AQEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYANRCIFKHSGEDGRGFVGENLAAGSY 60

Query: 62  NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVG 121
           +++G  AV  W +E  +Y++     ++G   GHYT VVW+N+ +IGC    C +   +V 
Sbjct: 61  DMTGPAAVQAWYNEIKNYNFGQPGFSSG--TGHYTQVVWKNTTKIGCGVAFCGSNSYYVV 118

Query: 122 CNY 124
           CNY
Sbjct: 119 CNY 121

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 97.4 bits (243), Expect = 4e-27
 Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 17/133 (12%)

Query: 13  DLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANR------------RYGENLAGSS 60
                 ++AHN+ RA  GV P+  + ++A +A+ YAN              YGENLA  +
Sbjct: 1   SFASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLA--A 58

Query: 61  GNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRC-NNGGTF 119
           G  SG+ AV  W  E  DYDY++      +  GH+T +VW+++ ++GCA   C    G +
Sbjct: 59  GYPSGTSAVDAWYDEIEDYDYSNPG--FSEATGHFTQLVWKSTTQVGCAYKDCGGAWGWY 116

Query: 120 VGCNYASPGDVVG 132
           + C Y   G+V+G
Sbjct: 117 IVCEYDPAGNVIG 129

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 94.6 bits (236), Expect = 5e-26
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 18/131 (13%)

Query: 16  QDYVNAHNAARAQVGVNPVKCDESIAAFARSYAN-------------RRYGENLAGSSGN 62
           ++ ++AHN  RA  G  P+K D+ +A  A+ +A                YGENLA +SG+
Sbjct: 4   KECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGS 63

Query: 63  ---LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTF 119
              L+G +AV  W +E   YD+N    ++    GH+T VVW++S  +G    +   G  +
Sbjct: 64  GPDLTGEEAVDSWYNEIKKYDFNKPGFSSK--TGHFTQVVWKSSTELGVGVAKSKKGCVY 121

Query: 120 VGCNYASPGDV 130
           V   Y   G+V
Sbjct: 122 VVARYRPAGNV 132

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 94.1 bits (234), Expect = 1e-25
 Identities = 49/131 (37%), Positives = 66/131 (50%), Gaps = 25/131 (19%)

Query: 19  VNAHNAARAQVG-----VNPVKCDESIAAFARSYANR------------RYGENLAGSSG 61
           V+ HN  R+QV      +  +  DE +AA A +YA +            R GENL  S+G
Sbjct: 5   VDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYARKCIWDHNPDRGHLRVGENLFISTG 64

Query: 62  -NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN----- 115
                + AV  W +EK DY+YN+N+C   K+CGHYT VVW N+ +IGC    C       
Sbjct: 65  PPFDATKAVEDWNNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLR 124

Query: 116 --GGTFVGCNY 124
               T + CNY
Sbjct: 125 WENATLLVCNY 135

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 87.4 bits (217), Expect = 4e-23
 Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 35/141 (24%)

Query: 17  DYVNAHNAARAQV-----GVNPVKCDESIAAFARSYANR-----------RY-------- 52
           + V  HN  R++V      +  +  D ++A  AR++A +           RY        
Sbjct: 5   ECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAKKCKFKHNIYLGKRYKCHPKFTS 64

Query: 53  -GENL-AGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAK 110
            GEN+  GS    S  +AV  W +E   YD+++NSC+  +VCGHYT VVW  S ++GCA 
Sbjct: 65  VGENIWLGSIYIFSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAV 122

Query: 111 VRCNNGGT------FVGCNYA 125
             C N G       FV CNYA
Sbjct: 123 AFCPNLGGIPNAAIFV-CNYA 142

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 83.0 bits (205), Expect = 2e-21
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 33/143 (23%)

Query: 16  QDYVNAHNAARAQV------------GVNPVKCDESIAAFARSYANR------------R 51
           Q  ++AHN  R++V             +  +K D+ +AA A+++A               
Sbjct: 2   QAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAKTCVFEHSPCRNTGG 61

Query: 52  YGENLAGSSGNLS-----GSDAVGLWVSEKADYDYNSNS-CNAGKVCGHYTHVVWRNSVR 105
            G+NLA  S   S       DAV  W +E  DY + SN   N     GH+T +VW  + +
Sbjct: 62  VGQNLAAGSSTGSTVEELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTK 121

Query: 106 IGCAKVRCNNGG---TFVGCNYA 125
           +GCA  RC   G   T V CNY+
Sbjct: 122 VGCAVARCGKDGGNKTVVVCNYS 144

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 61.6 bits (150), Expect = 3e-13
 Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 27/132 (20%)

Query: 19  VNAHNAARAQVGVNP-------VKCDESIAAFARSYANR----------RY------GEN 55
           V+ HN  R  V  NP       ++ +E  A  A+ +AN           R       GEN
Sbjct: 7   VDLHNELRRSV--NPTASNMLKMEWNEEAAQNAKKWANTCNLTHSPPNGRTIGGITCGEN 64

Query: 56  LAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN 115
           +  SS   S SD +  W  E  D+ Y   +   G V GHYT +VW  S  +GCA   C N
Sbjct: 65  IFMSSYPRSWSDVIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPN 124

Query: 116 GGT--FVGCNYA 125
                F  C+Y 
Sbjct: 125 SKYKYFYVCHYC 136

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 61.1 bits (148), Expect = 4e-13
 Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 15/121 (12%)

Query: 19  VNAHNAAR-AQVGVNPVKCDESIAAFARSYANR---------RYGENLAGSSGNLSGSD- 67
           +N HN  R A  G  P+  D ++AA A+ +A            YGENLA  S      D 
Sbjct: 1   LNLHNELRSAAGGAPPLSWDPTLAAAAQDHAAYCADNGYFGHDYGENLALVSVAGKADDP 60

Query: 68  ---AVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGG-TFVGCN 123
              AV  W  E  DYD            GH T+++W  S ++GCA  +C +G   +V CN
Sbjct: 61  GVAAVENWYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGCAVAKCGDGSSYYVVCN 120

Query: 124 Y 124
           Y
Sbjct: 121 Y 121

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|225218 COG2340, COG2340, Uncharacterized protein with SCP/PR1 domains [Function unknown]

 Score = 44.9 bits (106), Expect = 2e-06
 Identities = 28/146 (19%), Positives = 40/146 (27%), Gaps = 24/146 (16%)

Query: 2   GLALALPSRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR---------- 51
              +   S      +  V   N  RA+ G+ P+  + ++A  AR++A             
Sbjct: 68  SSPVESQSTLAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTS 127

Query: 52  -YGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAK 110
             GE  A     L      G    E   Y  N                 W NS   G  K
Sbjct: 128 PTGETPADR---LKKYGISGATAGENIAYGSNDP--------PEAAVDGWLNS--PGHRK 174

Query: 111 VRCNNGGTFVGCNYASPGDVVGQKPY 136
              N   T +G   A          +
Sbjct: 175 NLLNPAYTEIGVGVAYDASNRYGVYW 200

Length = 207

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	136
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	100.0
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	100.0
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	100.0
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	100.0
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	100.0
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	100.0
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	100.0
KOG3017	225	consensus Defense-related protein containing SCP d	100.0
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	100.0
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.9
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.77
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.63
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.07

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=5e-42  Score=230.15  Aligned_cols=121  Identities=62%  Similarity=1.179  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhh----h--------cccceeeecCC-CchhhhhHHhhhhcccCCCC
Q 045858           16 QDYVNAHNAARAQVGVNPVKCDESIAAFARSYANR----R--------YGENLAGSSGN-LSGSDAVGLWVSEKADYDYN   82 (136)
Q Consensus        16 ~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~----c--------~Gen~~~~~~~-~~~~~~v~~W~~e~~~y~~~   82 (136)
                      ++||+.||.+|+.++|++|+||++|+..||.||++    |        +|||+++..+. ..+.++|+.|++|...|++.
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~~   81 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGGNWSAADAVASWVSEKKYYDYD   81 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcCCCCcccCCCCCCceEEEecCCCCCHHHHHHHHHhccccCCCC
Confidence            68999999999999999999999999999999999    6        79999987643 57889999999999999998


Q ss_pred             CCCCCCCccchhHHHHHHHhCCeEeEEEEEeCC-CCEEEEEEccCCCCCCCCCCC
Q 045858           83 SNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN-GGTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        83 ~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~-~~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      .+.+..+..++|||||||+++++||||++.|.+ +..++||+|+|+||+.|++||
T Consensus        82 ~~~~~~~~~~~hftq~vw~~t~~vGCa~~~c~~~~~~~vvC~Y~p~gn~~g~~~Y  136 (136)
T cd05381          82 SNTCAAGKMCGHYTQVVWRNTTRVGCARVTCDNGGGVFIICNYDPPGNYIGQRPY  136 (136)
T ss_pred             CCCcCCCccchHHHHHHHHhcCEeceEEEEeCCCCcEEEEEEeeCCCCCCCCCCC
Confidence            887776678999999999999999999999987 458999999999999999998

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=100.00  E-value=2.7e-38  Score=210.26  Aligned_cols=116  Identities=38%  Similarity=0.824  Sum_probs=104.6

Q ss_pred             chHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh------------cccceeeecCCCchhhhhHHhhhhcccCC
Q 045858           13 DLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR------------YGENLAGSSGNLSGSDAVGLWVSEKADYD   80 (136)
Q Consensus        13 ~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c------------~Gen~~~~~~~~~~~~~v~~W~~e~~~y~   80 (136)
                      +.++.||+.||.+|+.++|++|+||++|+..||.||++|            +|||++....  ++.++|+.|++|...|+
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~~~~~~~~~~~geNi~~~~~--~~~~~v~~W~~e~~~y~   78 (129)
T cd05384           1 SFASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGYP--SGTSAVDAWYDEIEDYD   78 (129)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccCCceecCCCCCCcEEEEecC--CHHHHHHHHHhhhhhCC
Confidence            468999999999999999999999999999999999998            7999987543  68899999999999999


Q ss_pred             CCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC-CEEEEEEccCCCCCCC
Q 045858           81 YNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG-GTFVGCNYASPGDVVG  132 (136)
Q Consensus        81 ~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~-~~~~vC~Y~p~gn~~g  132 (136)
                      |..+.+  +..++|||||||+++++||||++.|.+. ..++||+|+|+||+.|
T Consensus        79 ~~~~~~--~~~~~h~tqmvw~~t~~vGCa~~~c~~~~~~~~vC~Y~p~Gn~~g  129 (129)
T cd05384          79 YSNPGF--SEATGHFTQLVWKSTTQVGCAYKDCGGAWGWYIVCEYDPAGNVIG  129 (129)
T ss_pred             CCCCCC--CCcccchhhhhhhccceeeeEEEEeCCCCeEEEEEEEECCCCCCc
Confidence            987654  3569999999999999999999999873 5889999999999875

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=100.00  E-value=5.3e-38  Score=209.29  Aligned_cols=116  Identities=37%  Similarity=0.703  Sum_probs=105.3

Q ss_pred             chHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh-------------cccceeeecC---CCchhhhhHHhhhhc
Q 045858           13 DLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR-------------YGENLAGSSG---NLSGSDAVGLWVSEK   76 (136)
Q Consensus        13 ~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c-------------~Gen~~~~~~---~~~~~~~v~~W~~e~   76 (136)
                      ++++.||+.||.+|+.++|++|+||++|+..||.||++|             +|||++...+   ...+.++|+.|++|.
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~e~   80 (132)
T cd05382           1 DFQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYNEI   80 (132)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCceeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHhcc
Confidence            468999999999999999999999999999999999999             6999998763   558899999999999


Q ss_pred             ccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCC
Q 045858           77 ADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDV  130 (136)
Q Consensus        77 ~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~  130 (136)
                      ..|++..+..  +..++||+||||+++++||||++.|+.+..++||+|+|+||+
T Consensus        81 ~~y~~~~~~~--~~~~gh~tqmvw~~t~~vGCa~~~~~~~~~~~vC~Y~p~Gn~  132 (132)
T cd05382          81 KKYDFNKPGF--SSKTGHFTQVVWKSSTELGVGVAKSKKGCVYVVARYRPAGNV  132 (132)
T ss_pred             ccCCCCCCCC--CCCCCCeEEeEecCCCceeeEEEEcCCCCEEEEEEEeCCCCC
Confidence            9999975543  356999999999999999999999997778999999999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=100.00  E-value=5.3e-37  Score=206.37  Aligned_cols=114  Identities=34%  Similarity=0.581  Sum_probs=103.1

Q ss_pred             hHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh----------------cccceeeecCCCchhhhhHHh
Q 045858           14 LPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR----------------YGENLAGSSGNLSGSDAVGLW   72 (136)
Q Consensus        14 ~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c----------------~Gen~~~~~~~~~~~~~v~~W   72 (136)
                      .|+.||+.||.+|+.+.     |++|+||++||..||.||++|                +|||++.......+.++|+.|
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a~~C~~~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~av~~W   81 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWANTCNLTHSPPNGRTIGGITCGENIFMSSYPRSWSDVIQAW   81 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHHhcCCCcCCchhhcccCCCCcceeeeccCCCCCHHHHHHHH
Confidence            57899999999999975     778999999999999999999                399998776666789999999


Q ss_pred             hhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC--CEEEEEEccCC
Q 045858           73 VSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG--GTFVGCNYASP  127 (136)
Q Consensus        73 ~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~--~~~~vC~Y~p~  127 (136)
                      ++|...|+|..+.+..+..++|||||||+++++||||++.|..+  ..++||+|+|+
T Consensus        82 ~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~vC~Y~P~  138 (138)
T cd05383          82 YDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCAVAYCPNSKYKYFYVCHYCPA  138 (138)
T ss_pred             HHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceEEEECCCCCcCEEEEEecCCC
Confidence            99999999998776666789999999999999999999999875  58999999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=100.00  E-value=2.3e-36  Score=204.11  Aligned_cols=114  Identities=42%  Similarity=0.725  Sum_probs=103.3

Q ss_pred             hHHHHHHHHHHHHHhcC-----------CCCceeCHHHHHHHHHHHhhh---------cccceeeecC-----CCchhhh
Q 045858           14 LPQDYVNAHNAARAQVG-----------VNPVKCDESIAAFARSYANRR---------YGENLAGSSG-----NLSGSDA   68 (136)
Q Consensus        14 ~~~~il~~hN~~R~~~~-----------m~~L~W~~~La~~A~~~a~~c---------~Gen~~~~~~-----~~~~~~~   68 (136)
                      .|+.||+.||.+|+.++           |++|+||++||..|+.+|++|         +|||++...+     ...+.++
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a~~C~~~~~~~~~~GeNi~~~~~~~~~~~~~~~~a   81 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWANQCPFGHSTPRGYGENLAWWSSSTDLPITYASAA   81 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHHHhCCCcCCCcCCcCcceEEecccCcccchhHHHH
Confidence            58999999999999999           999999999999999999999         7999998653     3477889


Q ss_pred             hHHhhhhcccCCCCCCCCCC-CccchhHHHHHHHhCCeEeEEEEEeCCCC---EEEEEEccCC
Q 045858           69 VGLWVSEKADYDYNSNSCNA-GKVCGHYTHVVWRNSVRIGCAKVRCNNGG---TFVGCNYASP  127 (136)
Q Consensus        69 v~~W~~e~~~y~~~~~~~~~-~~~~~~ftq~iw~~~~~vGCa~~~c~~~~---~~~vC~Y~p~  127 (136)
                      |+.|++|...|++..+.+.. +..++|||||||+++++||||++.|.++.   .++||+|+|+
T Consensus        82 v~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa~~~c~~~~~~~~~~vC~Y~P~  144 (144)
T smart00198       82 VQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCGVSNCPDGTKKKTVVVCNYDPP  144 (144)
T ss_pred             HHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceEEEECCCCCcceEEEEEecCCC
Confidence            99999999999998877664 56799999999999999999999998874   6999999995

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=100.00  E-value=7e-36  Score=202.21  Aligned_cols=113  Identities=38%  Similarity=0.690  Sum_probs=100.0

Q ss_pred             chHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh--------------------cccceeeecC-CCchh
Q 045858           13 DLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR--------------------YGENLAGSSG-NLSGS   66 (136)
Q Consensus        13 ~~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c--------------------~Gen~~~~~~-~~~~~   66 (136)
                      +++++||+.||.+|+.+.     |++|+||++|+..||.||++|                    +||||+.... ...+.
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a~~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~~~~~~   80 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAKKCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYIFSPK   80 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHHhcCCCCCCchhhcccccccccCcccceeeecccCCCCHH
Confidence            478999999999999994     899999999999999999999                    4899987653 45788


Q ss_pred             hhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC-----CEEEEEEccCC
Q 045858           67 DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG-----GTFVGCNYASP  127 (136)
Q Consensus        67 ~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~-----~~~~vC~Y~p~  127 (136)
                      ++|+.||+|...|+|..+.+.  ..++|||||||+++++||||+++|+.+     ..++||+|+|+
T Consensus        81 ~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa~~~c~~~~~~~~~~~vVC~Y~p~  144 (144)
T cd05385          81 NAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCAVAFCPNLGGIPNAAIFVCNYAPA  144 (144)
T ss_pred             HHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceEEEECCCCCCccccEEEEEeCCCC
Confidence            999999999999999877654  469999999999999999999999874     26899999984

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=100.00  E-value=5.1e-35  Score=196.31  Aligned_cols=111  Identities=43%  Similarity=0.803  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh------------cccceeeecC-CCchhhhhHHhhhhc
Q 045858           15 PQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR------------YGENLAGSSG-NLSGSDAVGLWVSEK   76 (136)
Q Consensus        15 ~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c------------~Gen~~~~~~-~~~~~~~v~~W~~e~   76 (136)
                      |+.||+.||.+|+.++     |.+|+||++||..||.||++|            +|||++...+ ...+.++|+.|++|.
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a~~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~W~~e~   80 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYARKCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDWNNEK   80 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHHHhccccCCCcccCCCceeeeeecCCCCCCHHHHHHHHHHHH
Confidence            5789999999999986     779999999999999999999            6999987764 467899999999999


Q ss_pred             ccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC-------CEEEEEEcc
Q 045858           77 ADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG-------GTFVGCNYA  125 (136)
Q Consensus        77 ~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~-------~~~~vC~Y~  125 (136)
                      ..|+|..+.+..+..++|||||||+++++||||++.|+++       ..++||+|+
T Consensus        81 ~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa~~~c~~~~~~~~~~~~~~vC~Y~  136 (136)
T cd05559          81 LDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCGSYFCETLEVLRWENATLLVCNYG  136 (136)
T ss_pred             HhcCCCCCCCCCCCcccchHHHHHhccCccceEEEECCCCCCCCcccCEEEEecCC
Confidence            9999998877777789999999999999999999999752       478999995

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=100.00  E-value=2.5e-34  Score=189.34  Aligned_cols=108  Identities=41%  Similarity=0.764  Sum_probs=98.7

Q ss_pred             HHHHHHHHHHHHhc-CCCCceeCHHHHHHHHHHHhhh------------cccceeeecCCCchhhhhHHhhhhcccCCCC
Q 045858           16 QDYVNAHNAARAQV-GVNPVKCDESIAAFARSYANRR------------YGENLAGSSGNLSGSDAVGLWVSEKADYDYN   82 (136)
Q Consensus        16 ~~il~~hN~~R~~~-~m~~L~W~~~La~~A~~~a~~c------------~Gen~~~~~~~~~~~~~v~~W~~e~~~y~~~   82 (136)
                      ++||+.||.+|+.+ +|+||+||++|+..|+.+|++|            +|||++...++.++..+|+.|++|...|+|.
T Consensus         2 ~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a~~c~~~h~~~~~~~~~geNi~~~~~~~~~~~~v~~W~~e~~~y~~~   81 (122)
T cd00168           2 QEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYANRCIFKHSGEDGRGFVGENLAAGSYDMTGPAAVQAWYNEIKNYNFG   81 (122)
T ss_pred             cHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhhccccCCCcccCCCCCceeEEecCCCCHHHHHHHHHHHHHhCCCC
Confidence            67999999999999 9999999999999999999999            6999998776578999999999999999998


Q ss_pred             CCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEcc
Q 045858           83 SNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYA  125 (136)
Q Consensus        83 ~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~  125 (136)
                      ++..  +..++||+||||+++++||||++.|+.+..++||+|+
T Consensus        82 ~~~~--~~~~~h~~qmvw~~s~~vGca~~~~~~~~~~~vC~Y~  122 (122)
T cd00168          82 QPGF--SSGTGHYTQVVWKNTTKIGCGVAFCGSNSYYVVCNYG  122 (122)
T ss_pred             CCCC--CCCccchhhhhcccCCeeeeEEEEcCCCCEEEEEeCc
Confidence            5543  3558999999999999999999999977799999995

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=100.00  E-value=3.4e-34  Score=206.54  Aligned_cols=124  Identities=45%  Similarity=0.847  Sum_probs=111.2

Q ss_pred             chHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh--------------cccceeeecCC-------Cchh
Q 045858           13 DLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR--------------YGENLAGSSGN-------LSGS   66 (136)
Q Consensus        13 ~~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c--------------~Gen~~~~~~~-------~~~~   66 (136)
                      +++++|++.||.+|..+.     |++|+||++||..||.||++|              +||||++.++.       ....
T Consensus        40 ~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a~~c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~~~~~  119 (225)
T KOG3017|consen   40 NLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWANTCPFGHDKCVHTSFGPYGENLAWGWSSNPPLSLDTSGA  119 (225)
T ss_pred             HHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHHhhCCcccCccccccCCCCcccceeeccCCCCccccccHH
Confidence            678999999999999999     999999999999999999999              39999987753       4677


Q ss_pred             hhhHHhhhhcccCCCCCCCCCC---CccchhHHHHHHHhCCeEeEEEEEeCCC-----CEEEEEEccCCCCCCC-CCCC
Q 045858           67 DAVGLWVSEKADYDYNSNSCNA---GKVCGHYTHVVWRNSVRIGCAKVRCNNG-----GTFVGCNYASPGDVVG-QKPY  136 (136)
Q Consensus        67 ~~v~~W~~e~~~y~~~~~~~~~---~~~~~~ftq~iw~~~~~vGCa~~~c~~~-----~~~~vC~Y~p~gn~~g-~~~Y  136 (136)
                      .+++.|+.|...|++.++.+..   +..++|||||||+++++||||++.|.++     ..++||+|+|+||..+ +.||
T Consensus       120 ~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCgv~~c~~~~~~~~~~~~vC~Y~p~g~~~~~~~~y  198 (225)
T KOG3017|consen  120 LAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCGVVRCGNGSNGYNTVAVVCNYDPPGNNINGEIPY  198 (225)
T ss_pred             HHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceeceeeccCCCCCCCcceEEEEEEeecCCCCcCCCCcC
Confidence            7999999999999999998875   6789999999999999999999999887     5799999999955545 6776

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=100.00  E-value=5.7e-33  Score=186.81  Aligned_cols=111  Identities=38%  Similarity=0.697  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHhc------------CCCCceeCHHHHHHHHHHHhhh------------cccceeeecCC-----Cch
Q 045858           15 PQDYVNAHNAARAQV------------GVNPVKCDESIAAFARSYANRR------------YGENLAGSSGN-----LSG   65 (136)
Q Consensus        15 ~~~il~~hN~~R~~~------------~m~~L~W~~~La~~A~~~a~~c------------~Gen~~~~~~~-----~~~   65 (136)
                      |+.||+.||.+|+.+            .|++|+||++||..|+.||++|            +|||++.....     ..+
T Consensus         1 ~~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a~~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~~   80 (144)
T cd05380           1 RQAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAKTCVFEHSPCRNTGGVGQNLAAGSSTGSTVEELA   80 (144)
T ss_pred             CcHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHHhcCCCcCCcccCCCCCCcEEEEeccCCCCHHHHH
Confidence            468999999999999            6999999999999999999999            59999987642     368


Q ss_pred             hhhhHHhhhhcccCCCCCC-CCCCCccchhHHHHHHHhCCeEeEEEEEeCC---CCEEEEEEcc
Q 045858           66 SDAVGLWVSEKADYDYNSN-SCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN---GGTFVGCNYA  125 (136)
Q Consensus        66 ~~~v~~W~~e~~~y~~~~~-~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~---~~~~~vC~Y~  125 (136)
                      .++|+.|++|...|++... ....+..++|||||||+++++||||++.|..   ...++||+|+
T Consensus        81 ~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa~~~~~~~~~~~~~~vC~Y~  144 (144)
T cd05380          81 EDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCAVARCGKDGGNKTVVVCNYS  144 (144)
T ss_pred             HHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceEEEEeecCCceEEEEEecCC
Confidence            8899999999999999875 3344567999999999999999999999985   3699999995

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.90  E-value=3.7e-23  Score=133.01  Aligned_cols=106  Identities=39%  Similarity=0.586  Sum_probs=79.8

Q ss_pred             HHHHHHHH-HhcCCCCceeCHHHHHHHHHHHhhh---------cccceeeecCCCchhhh----hHHhhhhcccCCCCC-
Q 045858           19 VNAHNAAR-AQVGVNPVKCDESIAAFARSYANRR---------YGENLAGSSGNLSGSDA----VGLWVSEKADYDYNS-   83 (136)
Q Consensus        19 l~~hN~~R-~~~~m~~L~W~~~La~~A~~~a~~c---------~Gen~~~~~~~~~~~~~----v~~W~~e~~~y~~~~-   83 (136)
                      |+.||++| ...++++|+||++|+..|+.+|+.|         .|+++............    ++.|+.+...+++.. 
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHAKYCANSNSLSHDSGENGSQSSRFGSYSDAQVTAVENWYSESKNYNFQNQ   80 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHHTTTCSSEETTEESEEEEEEESSTTSHHHHHHHHHHHHHGGGGGEETTCS
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhhHHhhhhcccccccCCCCccccccccccchhhHHHHHHHhcccccccccc
Confidence            78999999 7777888999999999999999999         56666655432222222    899999999987772 


Q ss_pred             -CCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCC--EEEEEEc
Q 045858           84 -NSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGG--TFVGCNY  124 (136)
Q Consensus        84 -~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~--~~~vC~Y  124 (136)
                       ....-...++||++|+|+.+++||||++.|..+.  .++||.|
T Consensus        81 ~~~~~~~~~~~h~~~ll~~~~~~iGca~~~~~~~~~~~~~vc~y  124 (124)
T PF00188_consen   81 SIFNSWMNSPGHFTNLLWPNTTRIGCAVANCPNGKNNYYWVCNY  124 (124)
T ss_dssp             TEESSTTSTCHHHHHHT-TT--EEEEEEEEETTSSSEEEEEEEE
T ss_pred             hhhhccCCchhhhhhhhcCCCCEEEEEEEEeCCCCeeEEEEEEC
Confidence             1112235689999999999999999999999885  9999998

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.77  E-value=6.5e-18  Score=112.08  Aligned_cols=95  Identities=25%  Similarity=0.369  Sum_probs=81.9

Q ss_pred             chHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh-----------------------------cccceeeecCCC
Q 045858           13 DLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR-----------------------------YGENLAGSSGNL   63 (136)
Q Consensus        13 ~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c-----------------------------~Gen~~~~~~~~   63 (136)
                      +.++++|+.||.+|..++++||+||+.|+..|+.||+.+                             .||||+.+.  .
T Consensus         3 ~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~--~   80 (127)
T TIGR02909         3 AEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGN--S   80 (127)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccC--C
Confidence            457889999999999999999999999999999999988                             278887543  3


Q ss_pred             chhhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEcc
Q 045858           64 SGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYA  125 (136)
Q Consensus        64 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~  125 (136)
                      ++..+|+.|++                +.+|+++|+|+..+.+|||++.+++++.|.|-.|.
T Consensus        81 ~~~~~v~~W~~----------------S~gH~~nil~~~~~~~Gvg~~~~~~g~~y~~q~F~  126 (127)
T TIGR02909        81 TVEAVHNAWMN----------------SPGHRANILNPNYTEIGVGYVEGGSGGIYWTQMFI  126 (127)
T ss_pred             CHHHHHHHHHc----------------CHhHHHHHcCCCcCeEeEEEEeCCCCCeEEEEEec
Confidence            67889999984                26899999999999999999998887677776653

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.63  E-value=2.4e-15  Score=97.92  Aligned_cols=91  Identities=27%  Similarity=0.387  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh-----------------------------cccceeeecCCCchh
Q 045858           16 QDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR-----------------------------YGENLAGSSGNLSGS   66 (136)
Q Consensus        16 ~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c-----------------------------~Gen~~~~~~~~~~~   66 (136)
                      +.+++.+|.+|..++++||+||.+|+..|+.+|..+                             .|||++....  .+.
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~--~~~   79 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS--TAE   79 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC--CHH
Confidence            578999999999999999999999999999999998                             1666665432  688


Q ss_pred             hhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEc
Q 045858           67 DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNY  124 (136)
Q Consensus        67 ~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y  124 (136)
                      ++++.|+++                .+|+.+|+++..+++|||+....++..++|..|
T Consensus        80 ~~~~~w~~~----------------~~H~~~ll~~~~~~~Gvg~~~~~~~~~y~~~~f  121 (122)
T cd05379          80 AAVDGWMNS----------------PGHRANILNPDYTEVGVGVAYGGDGGYYWVQVF  121 (122)
T ss_pred             HHHHHHhCC----------------HhHHHHHcCCCcceeeEEEEeCCCCCeEEEEec
Confidence            899999743                689999999999999999999887767777665

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.07  E-value=6.6e-10  Score=79.44  Aligned_cols=86  Identities=26%  Similarity=0.330  Sum_probs=71.6

Q ss_pred             CCchHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh-----------------------------cccceeeecC
Q 045858           11 AQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR-----------------------------YGENLAGSSG   61 (136)
Q Consensus        11 ~~~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c-----------------------------~Gen~~~~~~   61 (136)
                      .+++.+.+++.+|.+|..+++++|+||.+|+..|+.++...                             .||||+.++.
T Consensus        77 ~~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g~~  156 (207)
T COG2340          77 LAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYGSN  156 (207)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecCCC
Confidence            35677889999999999999999999999999999999988                             6777776543


Q ss_pred             CCch-hhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeC
Q 045858           62 NLSG-SDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCN  114 (136)
Q Consensus        62 ~~~~-~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~  114 (136)
                        +. ..+|+.|.                .+-||-++|+-+.-+.+|-|+..-.
T Consensus       157 --~~~~~~v~~Wl----------------~S~gH~~nll~~~~~~~Gv~~~~~~  192 (207)
T COG2340         157 --DPPEAAVDGWL----------------NSPGHRKNLLNPAYTEIGVGVAYDA  192 (207)
T ss_pred             --CchHHHHHHhc----------------CChhhhhhccCcchhheeEEEEecC
Confidence              23 68888886                3358889999988999998888644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	136
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		6e-28
3q2r_A	205	Crystal Structure Of Sglipr1 Soaked With Zinc Chlor		8e-08
1smb_A	154	Crystal Structure Of Golgi-Associated Pr-1 Protein		6e-07
4aiw_A	154	Gapr-1 With Bound Inositol Hexakisphosphate Length		7e-07
1rc9_A	221	Crystal Structure Of Stecrisp, A Member Of Crisp Fa		3e-06
1wvr_A	221	Crystal Structure Of A Crisp Family Ca-Channel Bloc		4e-06
2dda_A	211	Crystal Structure Of Pseudechetoxin From Pseudechis		6e-06
2ddb_A	210	Crystal Structure Of Pseudecin From Pseudechis Porp		9e-06
2vzn_A	218	Crystal Structure Of The Major Allergen From Fire A		1e-04
1xta_A	221	Crystal Structure Of Natrin, A Snake Venom Crisp Fr		1e-04
1xx5_A	221	Crystal Structure Of Natrin From Naja Atra Snake Ve		2e-04
1u53_A	196	Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein F		3e-04

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score =  119 bits (298), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 79/134 (58%), Gaps = 10/134 (7%)
Query: 12  QDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------YXXXXXXXXX 61
           Q+ PQDY+  HN ARAQVGV P+  D ++A+ A++YAN R                    
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGG 60
Query: 62  XXXXXDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVG 121
                 AV LWVSE+  Y+Y +N C  GK C HYT VVWRNSVR+GC + RCNNG  F+ 
Sbjct: 61  DFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFIS 120
Query: 122 CNYASPGDVVGQKP 135
           CNY   G+ +GQ+P
Sbjct: 121 CNYDPVGNWIGQRP 134

>pdb|3Q2R|A Chain A, Crystal Structure Of Sglipr1 Soaked With Zinc Chloride Length = 205

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 68  AVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRC---------NNGGT 118
           A+  W  E  DYD+ +  C   KVCGHYT VVW +S ++GCA   C         +NG  
Sbjct: 98  AITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAH 155
Query: 119 FVGCNYASPGDVVGQKPY 136
           F+ CNY  PG      PY
Sbjct: 156 FI-CNYG-PGGNYPTWPY 171

>pdb|1SMB|A Chain A, Crystal Structure Of Golgi-Associated Pr-1 Protein Length = 154

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSY----ANRRYXXXXXXXXXXX- 63
           S ++    + + AHN  R + GV P+K  +++   A+ Y    A+ R             
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQX 63
Query: 64  ------XXXDAVGL-----WVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVR 112
                    D  G      W SE  +Y++      +G   GH+T +VW+N+ ++G  K  
Sbjct: 64  GENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKAS 121
Query: 113 CNNGGTFVGCNYASPGDVVGQ 133
            ++G +FV   Y   G+VV +
Sbjct: 122 ASDGSSFVVARYFPAGNVVNE 142

>pdb|4AIW|A Chain A, Gapr-1 With Bound Inositol Hexakisphosphate Length = 154

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 18/141 (12%)
Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSY----ANRRYXXXXXXXXXXX- 63
           S ++    + + AHN  R + GV P+K  +++   A+ Y    A+ R             
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPPLKLXKNLNREAQQYSEALASTRILKHSPESSRGQC 63
Query: 64  ------XXXDAVGL-----WVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVR 112
                    D  G      W SE  +Y++      +G   GH+T +VW+N+ ++G  K  
Sbjct: 64  GENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKAS 121
Query: 113 CNNGGTFVGCNYASPGDVVGQ 133
            ++G +FV   Y   G+VV +
Sbjct: 122 ASDGSSFVVARYFPAGNVVNE 142

>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family From Trimeresurus Stejnegeri Refined At 1.6 Angstroms Resolution: Structual Relationship Of The Two Domains Length = 221

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 67  DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG--GTFVGCNY 124
           D +  W  E  D+ Y   +     V GHYT +VW  S RIGCA   C +     F  C Y
Sbjct: 88  DIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQY 147
Query: 125 ASPGDVVGQ 133
              G+ +G+
Sbjct: 148 CPAGNFIGK 156

>pdb|1WVR|A Chain A, Crystal Structure Of A Crisp Family Ca-Channel Blocker Derived From Snake Venom Length = 221

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 67  DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG--GTFVGCNY 124
           D +  W  E  D+ Y   +  +  V GHYT +VW  S R GCA   C +     F  C Y
Sbjct: 88  DIIHAWHGEYKDFKYGVGAVPSDAVIGHYTQIVWYKSYRAGCAAAYCPSSKYSYFYVCQY 147
Query: 125 ASPGDVVGQ 133
              G+++G+
Sbjct: 148 CPAGNIIGK 156

>pdb|2DDA|A Chain A, Crystal Structure Of Pseudechetoxin From Pseudechis Australis Length = 211

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 69  VGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPG 128
           V  W  E  ++ Y   +   G V GHYT VVW  S  IGCA  +C++      C Y   G
Sbjct: 82  VQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSYLIGCASAKCSSSKYLYVCQYCPAG 141
Query: 129 DVVG 132
           ++ G
Sbjct: 142 NIRG 145

>pdb|2DDB|A Chain A, Crystal Structure Of Pseudecin From Pseudechis Porphyriacus Length = 210

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 69  VGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPG 128
           V  W  E  ++ Y   +   G V GHYT VVW  S  IGCA  +C++      C Y   G
Sbjct: 81  VQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAG 140
Query: 129 DVVG 132
           ++ G
Sbjct: 141 NIRG 144

>pdb|2VZN|A Chain A, Crystal Structure Of The Major Allergen From Fire Ant Venom, Sol I 3 Length = 218

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 11/80 (13%)
Query: 67  DAVGLWVSEKADYD------YNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRC----NNG 116
           + + LW +E  D+D      + S+     KV GHYT +VW  + +IGC ++      N  
Sbjct: 130 EMILLWYNEVKDFDNRWISSFPSDDNILMKV-GHYTQIVWAKTTKIGCGRIMFKEPDNWT 188
Query: 117 GTFVGCNYASPGDVVGQKPY 136
             ++ CNY   G+V+G   Y
Sbjct: 189 KHYLVCNYGPAGNVLGAPIY 208

>pdb|1XTA|A Chain A, Crystal Structure Of Natrin, A Snake Venom Crisp From Taiwan Cobra (Naja Atra) Length = 221

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 67  DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGT--FVGCNY 124
           + + LW  E  ++ Y   +   G V GHYT +VW  + R GCA   C +     F  C Y
Sbjct: 88  EIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQY 147
Query: 125 ASPGDVVGQ--KPY 136
              G+  G+   PY
Sbjct: 148 CPSGNFQGKTATPY 161

>pdb|1XX5|A Chain A, Crystal Structure Of Natrin From Naja Atra Snake Venom Length = 221

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 67  DAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGG--TFVGCNY 124
           + + LW  E  ++ Y   +   G V GHYT +VW  + R GCA   C +     F  C Y
Sbjct: 88  EIIHLWHDEYKNFVYGVGANPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQY 147
Query: 125 ASPGDVVGQ--KPY 136
              G+  G+   PY
Sbjct: 148 CPSGNFQGKTATPY 161

>pdb|1U53|A Chain A, Novel X-Ray Structure Of Na-Asp-2, A Pr-1 Protein From The Nematode Parasite Necator Americanus And A Vaccine Antigen For Human Hookworm Infection Length = 196

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 93  GHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           GHYT +VW+ +V++GC    C+N   +V C Y   G+++G+  Y
Sbjct: 133 GHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPAGNMMGKDIY 175

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	136
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	6e-58
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	4e-51
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	1e-41
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	9e-39
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	2e-37
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	7e-37
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	1e-35
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	7e-34
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	2e-31
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	5e-30
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	2e-19
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	6e-09

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  175 bits (445), Expect = 6e-58
 Identities = 70/135 (51%), Positives = 89/135 (65%), Gaps = 10/135 (7%)

Query: 12  QDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------YGENLAGSSG 61
           Q+ PQDY+  HN ARAQVGV P+  D ++A+ A++YAN R           GENLA   G
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGG 60

Query: 62  NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVG 121
           + +G  AV LWVSE+  Y+Y +N C  GK C HYT VVWRNSVR+GC + RCNNG  F+ 
Sbjct: 61  DFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFIS 120

Query: 122 CNYASPGDVVGQKPY 136
           CNY   G+ +GQ+PY
Sbjct: 121 CNYDPVGNWIGQRPY 135

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  158 bits (402), Expect = 4e-51
 Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 18/144 (12%)

Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------------Y 52
           S ++    + + AHN  R + GV P+K  +++   A+ Y+                    
Sbjct: 4   SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQC 63

Query: 53  GENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVR 112
           GENLA +S + +G +    W SE  +Y++      +G   GH+T +VW+N+ ++G  K  
Sbjct: 64  GENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKAS 121

Query: 113 CNNGGTFVGCNYASPGDVVGQKPY 136
            ++G +FV   Y   G+VV +  +
Sbjct: 122 ASDGSSFVVARYFPAGNVVNEGFF 145

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score =  136 bits (344), Expect = 1e-41
 Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 23/149 (15%)

Query: 11  AQDLPQDYVNAHNAARAQV-----GVNPVKCDESIAAFARSYANR--------------- 50
            ++  ++ V+ HNA R  V      +  +K +   A  A+ +A+R               
Sbjct: 2   KKNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGK 61

Query: 51  -RYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCA 109
            R GEN+  SS     S  V  W  E  ++ Y   +   G V GHYT VVW  S  IGCA
Sbjct: 62  LRCGENIFMSSQPFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCA 121

Query: 110 KVRCNNGGTFVGCNYASPGDVVGQ--KPY 136
             +C++      C Y   G++ G    PY
Sbjct: 122 SAKCSSSKYLYVCQYCPAGNIRGSIATPY 150

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score =  129 bits (325), Expect = 9e-39
 Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 25/156 (16%)

Query: 6   ALPSRAQDLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANR---------- 50
           +  +R +   ++ V+ HN+ R +V      +  ++     A+ A  +AN           
Sbjct: 6   SESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNL 65

Query: 51  ------RYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSV 104
                 + GE++  SS   + ++ + LW  E  ++ Y   +   G V GHYT +VW  + 
Sbjct: 66  RVLEGIQCGESIYMSSNARTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTY 125

Query: 105 RIGCAKVRCNNGG--TFVGCNYASPGDVVGQ--KPY 136
           R GCA   C +     F  C Y   G+  G+   PY
Sbjct: 126 RAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score =  125 bits (315), Expect = 2e-37
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 39/164 (23%)

Query: 12  QDLPQDYVNAHNAARAQVGVNPVKC-----------------DESIAAFARSYANR---- 50
           +   QD +  HN  R ++                        ++ +A  A+ +AN+    
Sbjct: 43  KQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYG 102

Query: 51  ----------RYGENLAGSSGNLSGSD----AVGLWVSEKADYDYNSNSC-NAGKVCGHY 95
                     + G+N+A +    +  D     V +W  E  DY+       N     GHY
Sbjct: 103 HDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHY 162

Query: 96  THVVWRNSVRIGCAKVRCNNGG---TFVGCNYASPGDVVGQKPY 136
           T +VW N+  +GC  ++         ++ CNY   G+   ++ Y
Sbjct: 163 TQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score =  123 bits (311), Expect = 7e-37
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 39/164 (23%)

Query: 11  AQDLPQDYVNAHNAARAQVGVNPVKC-----------------DESIAAFARSYANRR-- 51
           +++  Q ++  HN+ R+ V +   K                  D  +   A + A +   
Sbjct: 13  SEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVF 72

Query: 52  ----------YGENLAGSSG-----NLSGSDAVGLWVSEKADYDYNSNSC----NAGKVC 92
                      GEN+  SS        +   A   W  E A+     N         +  
Sbjct: 73  KHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGV 132

Query: 93  GHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           GHYT +VW+ +V++GC    C+N   +V C Y   G+++G+  Y
Sbjct: 133 GHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPAGNMMGKDIY 175

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score =  121 bits (304), Expect = 1e-35
 Identities = 50/169 (29%), Positives = 68/169 (40%), Gaps = 38/169 (22%)

Query: 3   LALALPS-RAQDLPQDYVNAHNAARAQVGVNPVKC-----DESIAAFARSYANR------ 50
            A  LP    +D  +D V  HN  R++V            D ++A  A+++A+       
Sbjct: 6   FANILPDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHN 65

Query: 51  --------------RYGENLA-GSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHY 95
                           GEN+  GS    S S A+  W  E  DYD+ +  C   KVCGHY
Sbjct: 66  TRLKPPHKLHPNFTSLGENIWTGSVPIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHY 123

Query: 96  THVVWRNSVRIGCAKVRCNNG--------GTFVGCNYASPGDVVGQKPY 136
           T VVW +S ++GCA   C           G    CNY   G+     PY
Sbjct: 124 TQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGN-YPTWPY 171

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score =  116 bits (293), Expect = 7e-34
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 44/169 (26%)

Query: 12  QDLPQDYVNAHNAARAQVGVNPVKC-----------------DESIAAFARSYANR---- 50
                  VN HN  R +V                        D  +A  A+ +AN+    
Sbjct: 40  DAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFE 99

Query: 51  ----------RYGENLAGSSG----NLSGSDAVGLWVSEKADYDYNSNSC-----NAGKV 91
                       G+N+A +S       + ++ + LW +E  D+D    S      N    
Sbjct: 100 HDACRNVERFAVGQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMK 159

Query: 92  CGHYTHVVWRNSVRIGCAKVRCNNGG----TFVGCNYASPGDVVGQKPY 136
            GHYT +VW  + +IGC ++           ++ CNY   G+V+G   Y
Sbjct: 160 VGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNYGPAGNVLGAPIY 208

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  114 bits (286), Expect = 2e-31
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 42/162 (25%)

Query: 16  QDYVNAHNAARAQVGVNPVKC-----------------DESIAAFARSYANR-------- 50
             +++ HN  R+ V                        D  + A A  + N+        
Sbjct: 239 DTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKCVYQHSHG 298

Query: 51  ----RYGENLAGSSG-----NLSGSDAVGLWVSEKADYDYNSNSC-------NAGKVCGH 94
                 GEN+  +S      N +   A  LW +E  +Y    ++              GH
Sbjct: 299 EDRPGLGENIYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGH 358

Query: 95  YTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           YT + W  + ++GCA V CN+  TF  C Y   G+ +G   Y
Sbjct: 359 YTQMAWDTTYKLGCAVVFCND-FTFGVCQYGPGGNYMGHVIY 399

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score =  110 bits (277), Expect = 5e-30
 Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 33/157 (21%)

Query: 12  QDLPQDYVNAHNAARAQVGVNPVKC----------------DESIAAFARSYAN------ 49
               Q +++ HN AR +V                       D ++    +          
Sbjct: 34  DSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQSCPSGF 93

Query: 50  ---RRYGENLAGSSGN-------LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVV 99
              +   +N    S +       +     +  W S         ++   G     ++++V
Sbjct: 94  AGIQGVAQNTMSWSSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMV 153

Query: 100 WRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY 136
           +  + ++GCA   C        C Y   G +  Q  +
Sbjct: 154 YSETTKLGCAYKVCGTKLAVS-CIYNGVGYITNQPMW 189

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 79.7 bits (196), Expect = 2e-19
 Identities = 22/164 (13%), Positives = 41/164 (25%), Gaps = 40/164 (24%)

Query: 12  QDLPQDYVNAHNAARAQVGVNPVKC-----------DESIAAFARSYANR---------- 50
           ++   + ++  N  R  V                  D  +A  A+ +             
Sbjct: 38  KEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHACRN 97

Query: 51  -----RYGENLAGSSGNLSGS------DAVGLWVSEKADYDY----NSNSCNAGKVCGHY 95
                  G+     SG+          DAV     +K +       N             
Sbjct: 98  TERFWLPGQLNFKYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKEL 157

Query: 96  THVVWRNSVRIGCAKVRCNNGG---TFVGCNYASPGDVVGQKPY 136
              +      +GC      +G      + CN+ S  +  G+  Y
Sbjct: 158 ALAISDRVTAVGCGLTTWEDGAKARALLTCNF-SSQNTRGRPVY 200

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 51.2 bits (122), Expect = 6e-09
 Identities = 19/138 (13%), Positives = 35/138 (25%), Gaps = 24/138 (17%)

Query: 16  QDYVNAHNAARAQV------------GVNPVKCDESIAAFARSYANRRYGENLAGSSGNL 63
           +     HN  R ++             +  +  D  +   AR         +L       
Sbjct: 20  EAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIKLPGYADLHHRGVTR 79

Query: 64  SGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGT----- 118
              D  G  +S   +     ++            VV+  + R GC+     N  T     
Sbjct: 80  FSGDYEGSAISALKEILETFSAD-----KNSMRQVVYPKATRFGCSGRLRRNKKTGMRRM 134

Query: 119 FVGCNYASPGDVVGQKPY 136
              C Y         + +
Sbjct: 135 DWVCVYDKKP--KDGESF 150

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	136
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	100.0
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	100.0
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	100.0
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	100.0
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	100.0
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	100.0
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	100.0
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.54
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.32

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=3e-46  Score=254.73  Aligned_cols=126  Identities=30%  Similarity=0.591  Sum_probs=116.8

Q ss_pred             CCCCchHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh----------------cccceeeecCCCchhhhhHHh
Q 045858            9 SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------------YGENLAGSSGNLSGSDAVGLW   72 (136)
Q Consensus         9 ~~~~~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c----------------~Gen~~~~~~~~~~~~~v~~W   72 (136)
                      +.+++++++||+.||.+|+.|++++|+||++|+..||.||++|                +||||++...+.++.++|+.|
T Consensus         4 s~~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W   83 (154)
T 4aiw_A            4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRW   83 (154)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHH
Confidence            4456789999999999999999999999999999999999876                699999888777899999999


Q ss_pred             hhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 045858           73 VSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        73 ~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      |+|..+|+|..+.+..+  +||||||||++|++||||++.|.++..++||+|+|+||+.|+.||
T Consensus        84 ~~E~~~y~~~~~~~~~~--~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y  145 (154)
T 4aiw_A           84 YSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF  145 (154)
T ss_dssp             HGGGGGCCTTSCSCCTT--THHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred             HHHhhhcccCCCCcCCC--cCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccch
Confidence            99999999999887644  999999999999999999999999889999999999999998776

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=1.8e-45  Score=245.96  Aligned_cols=125  Identities=55%  Similarity=1.045  Sum_probs=116.4

Q ss_pred             CchHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHh----hh------cccceeeecCCCchhhhhHHhhhhcccCCC
Q 045858           12 QDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYAN----RR------YGENLAGSSGNLSGSDAVGLWVSEKADYDY   81 (136)
Q Consensus        12 ~~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~----~c------~Gen~~~~~~~~~~~~~v~~W~~e~~~y~~   81 (136)
                      ++.+++||+.||.+|+.++|++|+||++|+..||.||+    +|      .||||+++++..++.++|+.|++|...|+|
T Consensus         1 ~~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~GENla~~~~~~~~~~~v~~W~~E~~~y~~   80 (135)
T 1cfe_A            1 QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNY   80 (135)
T ss_dssp             CCSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSSSBCCEECSSSCCHHHHHHHHHTTGGGEEG
T ss_pred             CcHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCCCeEEEEecCCCCHHHHHHHHHhHHhhCCC
Confidence            35789999999999999999999999999999999999    77      399999876556899999999999999999


Q ss_pred             CCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 045858           82 NSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        82 ~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      ..+.+..+..++|||||||+++++||||++.|.++..++||+|+|+||+.|++||
T Consensus        81 ~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY  135 (135)
T 1cfe_A           81 ATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             CCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence            9988877778999999999999999999999987779999999999999999999

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=100.00  E-value=2.6e-41  Score=240.69  Aligned_cols=125  Identities=34%  Similarity=0.607  Sum_probs=114.3

Q ss_pred             CchHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh----------------cccceeeecCCCchhhhhH
Q 045858           12 QDLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR----------------YGENLAGSSGNLSGSDAVG   70 (136)
Q Consensus        12 ~~~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c----------------~Gen~~~~~~~~~~~~~v~   70 (136)
                      ++++++||+.||.+|+.|+     |.+|+||++||..||.||++|                +||||++.+...++.++|+
T Consensus         3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~~av~   82 (210)
T 2ddb_A            3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCGENIFMSSQPFPWSGVVQ   82 (210)
T ss_dssp             -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGSEETTEECEEEEEEESSCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHhcCCCCCCCccccccCCCCCcceEEEEcCCCCHHHHHH
Confidence            4678999999999999996     779999999999999999999                3999998876667899999


Q ss_pred             HhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCCCCC--CCC
Q 045858           71 LWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQ--KPY  136 (136)
Q Consensus        71 ~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~--~~Y  136 (136)
                      .||+|..+|+|..+.+..+..++|||||||+++++||||++.|..+.+++||+|+|+||+.|+  +||
T Consensus        83 ~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY  150 (210)
T 2ddb_A           83 AWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY  150 (210)
T ss_dssp             HHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred             HHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence            999999999999876666677999999999999999999999988778999999999999999  898

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=100.00  E-value=3.9e-41  Score=241.39  Aligned_cols=130  Identities=29%  Similarity=0.561  Sum_probs=117.3

Q ss_pred             ccCCCCchHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh----------------cccceeeecCCCch
Q 045858            7 LPSRAQDLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR----------------YGENLAGSSGNLSG   65 (136)
Q Consensus         7 ~~~~~~~~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c----------------~Gen~~~~~~~~~~   65 (136)
                      ....+++++++||+.||.+|+.|+     |++|+||++||..||.||++|                +||||++.+...++
T Consensus         7 l~~~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~   86 (221)
T 1xta_A            7 ESTRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRVLEGIQCGESIYMSSNARTW   86 (221)
T ss_dssp             GCTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGCEETTEECEEEEEEESSCCCH
T ss_pred             hcCCCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHhcCCCCCcCccccccCCCCCceEEEeecCCCCH
Confidence            344556789999999999999996     779999999999999999999                39999988766678


Q ss_pred             hhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC--CEEEEEEccCCCCCCCC--CCC
Q 045858           66 SDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG--GTFVGCNYASPGDVVGQ--KPY  136 (136)
Q Consensus        66 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y  136 (136)
                      .++|+.||+|..+|+|..+.+..+..+||||||||+++++||||++.|..+  ..++||+|+|+||+.|+  +||
T Consensus        87 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY  161 (221)
T 1xta_A           87 TEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY  161 (221)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence            999999999999999998776656779999999999999999999999874  68999999999999999  898

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=100.00  E-value=1.4e-40  Score=234.45  Aligned_cols=129  Identities=26%  Similarity=0.502  Sum_probs=113.0

Q ss_pred             ccCCCCchHHHHHHHHHHHHHhcC-----------------CCCceeCHHHHHHHHHHHhhh------------ccccee
Q 045858            7 LPSRAQDLPQDYVNAHNAARAQVG-----------------VNPVKCDESIAAFARSYANRR------------YGENLA   57 (136)
Q Consensus         7 ~~~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~W~~~La~~A~~~a~~c------------~Gen~~   57 (136)
                      ...+++++++.||+.||.+|+.|+                 |++|+||++||..||.||++|            +||||+
T Consensus         9 ~~~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~GeNl~   88 (196)
T 1u53_A            9 DNGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVFKHSQPNQRKGLGENIF   88 (196)
T ss_dssp             SSSCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCCCCCCGGGSTTCEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHHhCccCCCccccCCCCCeEEE
Confidence            345667789999999999999982                 679999999999999999999            699999


Q ss_pred             eecCCC-----chhhhhHHhhhhcccCCCCC-CCCC---CCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCC
Q 045858           58 GSSGNL-----SGSDAVGLWVSEKADYDYNS-NSCN---AGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPG  128 (136)
Q Consensus        58 ~~~~~~-----~~~~~v~~W~~e~~~y~~~~-~~~~---~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~g  128 (136)
                      +.++..     .+.++|+.||+|...|+|.. +.+.   .+..++|||||||+++++||||++.|.+ ..++||+|+|+|
T Consensus        89 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y~p~G  167 (196)
T 1u53_A           89 MSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPAG  167 (196)
T ss_dssp             EESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEEESCC
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEeCCCC
Confidence            765432     35889999999999999987 5443   2456999999999999999999999987 599999999999


Q ss_pred             CCCCCCCC
Q 045858          129 DVVGQKPY  136 (136)
Q Consensus       129 n~~g~~~Y  136 (136)
                      |+.|++||
T Consensus       168 N~~g~~~Y  175 (196)
T 1u53_A          168 NMMGKDIY  175 (196)
T ss_dssp             CCTTSBSS
T ss_pred             CCCCCcCC
Confidence            99999998

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=100.00  E-value=8.1e-41  Score=237.88  Aligned_cols=129  Identities=24%  Similarity=0.469  Sum_probs=111.2

Q ss_pred             cCCCCchHHHHHHHHHHHHHhcC-----------------CCCceeCHHHHHHHHHHHhhh--------------cccce
Q 045858            8 PSRAQDLPQDYVNAHNAARAQVG-----------------VNPVKCDESIAAFARSYANRR--------------YGENL   56 (136)
Q Consensus         8 ~~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~W~~~La~~A~~~a~~c--------------~Gen~   56 (136)
                      ..+++++++.||+.||.+|+.|+                 |++|+||++||..||.||++|              +||||
T Consensus        39 ~~l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~GeNl  118 (209)
T 1qnx_A           39 YGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNV  118 (209)
T ss_dssp             ESCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCCCCSSSCCEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHhcCcccCCCccCCCCCCCccEE
Confidence            34566789999999999999983                 889999999999999999999              49999


Q ss_pred             eeecC----CCchhhhhHHhhhhcccCCCCCCCCC-CCccchhHHHHHHHhCCeEeEEEEEeCCC---CEEEEEEccCCC
Q 045858           57 AGSSG----NLSGSDAVGLWVSEKADYDYNSNSCN-AGKVCGHYTHVVWRNSVRIGCAKVRCNNG---GTFVGCNYASPG  128 (136)
Q Consensus        57 ~~~~~----~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~~ftq~iw~~~~~vGCa~~~c~~~---~~~~vC~Y~p~g  128 (136)
                      ++...    ...+.++|+.||+|...|+|..+... ....++|||||||+++++||||++.|..+   ..++||+|+|+|
T Consensus       119 ~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~G  198 (209)
T 1qnx_A          119 ALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSG  198 (209)
T ss_dssp             EEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred             EEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCCC
Confidence            98653    23688999999999999999864211 12468999999999999999999999764   368999999999


Q ss_pred             CCCCCCCC
Q 045858          129 DVVGQKPY  136 (136)
Q Consensus       129 n~~g~~~Y  136 (136)
                      |+.|++||
T Consensus       199 N~~g~~~Y  206 (209)
T 1qnx_A          199 NFKNEELY  206 (209)
T ss_dssp             CCTTSCSS
T ss_pred             CCCCCCCC
Confidence            99999998

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=100.00  E-value=4.4e-40  Score=235.45  Aligned_cols=129  Identities=29%  Similarity=0.549  Sum_probs=109.7

Q ss_pred             cCCCCchHHHHHHHHHHHHHhcC-----------------CCCceeCHHHHHHHHHHHhhh--------------cccce
Q 045858            8 PSRAQDLPQDYVNAHNAARAQVG-----------------VNPVKCDESIAAFARSYANRR--------------YGENL   56 (136)
Q Consensus         8 ~~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~W~~~La~~A~~~a~~c--------------~Gen~   56 (136)
                      ..+++++++.||+.||.+|+.|+                 |++|+||++||..||.||++|              +||||
T Consensus        36 ~~~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~Hs~c~~~~~~~~GeNl  115 (218)
T 2vzn_A           36 VGFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDACRNVERFAVGQNI  115 (218)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHTTCCSSCCSCCCCSSSCCEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHHhCCcCCCCCCCCccCCCceEE
Confidence            34556789999999999999983                 889999999999999999999              59999


Q ss_pred             eeecCC----CchhhhhHHhhhhcccCCCCCC-CCC----CCccchhHHHHHHHhCCeEeEEEEEeCC-C---CEEEEEE
Q 045858           57 AGSSGN----LSGSDAVGLWVSEKADYDYNSN-SCN----AGKVCGHYTHVVWRNSVRIGCAKVRCNN-G---GTFVGCN  123 (136)
Q Consensus        57 ~~~~~~----~~~~~~v~~W~~e~~~y~~~~~-~~~----~~~~~~~ftq~iw~~~~~vGCa~~~c~~-~---~~~~vC~  123 (136)
                      ++....    ..+.++|+.||+|...|+|... ...    ....++|||||||++|++||||++.|.. +   ..++||+
T Consensus       116 ~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC~  195 (218)
T 2vzn_A          116 AATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCN  195 (218)
T ss_dssp             EEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEEE
T ss_pred             EEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEEE
Confidence            986532    3567999999999999998842 111    1245899999999999999999999976 3   3699999


Q ss_pred             ccCCCCCCCCCCC
Q 045858          124 YASPGDVVGQKPY  136 (136)
Q Consensus       124 Y~p~gn~~g~~~Y  136 (136)
                      |+|+||+.|++||
T Consensus       196 Y~P~GN~~g~~~y  208 (218)
T 2vzn_A          196 YGPAGNVLGAPIY  208 (218)
T ss_dssp             EESCCCCTTSCSS
T ss_pred             ECCCCCCCCCccc
Confidence            9999999999998

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=100.00  E-value=2.3e-39  Score=229.75  Aligned_cols=125  Identities=37%  Similarity=0.676  Sum_probs=111.1

Q ss_pred             CCCCchHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh--------------------cccceeeecC-C
Q 045858            9 SRAQDLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR--------------------YGENLAGSSG-N   62 (136)
Q Consensus         9 ~~~~~~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c--------------------~Gen~~~~~~-~   62 (136)
                      ...++++++||+.||.+|+.|+     |.+|+||++||..||.||++|                    +||||+.++. .
T Consensus        13 ~~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~~~   92 (205)
T 3q2u_A           13 IENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPI   92 (205)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTCBSSCCTTSSTTCCSSTTCSSCEEEEEEEETTT
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHHhCCCCCCccccccccccCCCCCCceEEEEccCCC
Confidence            3346689999999999999996     889999999999999999999                    4999987653 4


Q ss_pred             CchhhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCC--------CCEEEEEEccCCCCCCCCC
Q 045858           63 LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNN--------GGTFVGCNYASPGDVVGQK  134 (136)
Q Consensus        63 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~--------~~~~~vC~Y~p~gn~~g~~  134 (136)
                      .++.++|+.||+|...|+|..+.+.  ..++|||||||+.+++||||++.|..        ...++||+|+|+||+ +++
T Consensus        93 ~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~~~  169 (205)
T 3q2u_A           93 FSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-PTW  169 (205)
T ss_dssp             CCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-SSC
T ss_pred             CCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-CCC
Confidence            5789999999999999999987764  56999999999999999999999985        247899999999999 788


Q ss_pred             CC
Q 045858          135 PY  136 (136)
Q Consensus       135 ~Y  136 (136)
                      ||
T Consensus       170 pY  171 (205)
T 3q2u_A          170 PY  171 (205)
T ss_dssp             SS
T ss_pred             CC
Confidence            88

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=100.00  E-value=2.2e-38  Score=228.65  Aligned_cols=127  Identities=17%  Similarity=0.225  Sum_probs=107.1

Q ss_pred             CCCCchHHHHHHHHHHHHHhc-----------CCCCceeCHHHHHHHHHHHhhh---------------cccceeeecCC
Q 045858            9 SRAQDLPQDYVNAHNAARAQV-----------GVNPVKCDESIAAFARSYANRR---------------YGENLAGSSGN   62 (136)
Q Consensus         9 ~~~~~~~~~il~~hN~~R~~~-----------~m~~L~W~~~La~~A~~~a~~c---------------~Gen~~~~~~~   62 (136)
                      .+++++++.||+.||.+|+.|           .|++|+||++||..||.||++|               +|||++..++.
T Consensus        35 ~~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~c~~~~~~~~~Gen~~~~~~~  114 (233)
T 3u3l_C           35 ELLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHACRNTERFWLPGQLNFKYSGD  114 (233)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHTTCCSCCCCBCCCSSCSSCEEEEEEEEES
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHHhCCCCCCcccccCcCCcCeEEEEEecCC
Confidence            455778999999999999999           4999999999999999999999               58887765432


Q ss_pred             --C----chhhhhHHhhhhcccCCCCC----CCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC---CEEEEEEccCCCC
Q 045858           63 --L----SGSDAVGLWVSEKADYDYNS----NSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG---GTFVGCNYASPGD  129 (136)
Q Consensus        63 --~----~~~~~v~~W~~e~~~y~~~~----~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~---~~~~vC~Y~p~gn  129 (136)
                        .    .+.++|+.||+|.+.|++..    +....+..++|||||||++|++||||++.|..+   ..++||+|+| ||
T Consensus       115 ~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p-GN  193 (233)
T 3u3l_C          115 KLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-QN  193 (233)
T ss_dssp             SCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-CC
T ss_pred             CCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-CC
Confidence              1    25789999999999998653    122234579999999999999999999999764   4799999998 99


Q ss_pred             CCCCCCC
Q 045858          130 VVGQKPY  136 (136)
Q Consensus       130 ~~g~~~Y  136 (136)
                      +.|++||
T Consensus       194 ~~g~~~Y  200 (233)
T 3u3l_C          194 TRGRPVY  200 (233)
T ss_dssp             CTTSCSS
T ss_pred             CCCCcee
Confidence            9999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=8.9e-37  Score=236.47  Aligned_cols=127  Identities=28%  Similarity=0.498  Sum_probs=111.4

Q ss_pred             CCCCchHHHHHHHHHHHHHhcC-----------------CCCceeCHHHHHHHHHHHhhh------------cccceeee
Q 045858            9 SRAQDLPQDYVNAHNAARAQVG-----------------VNPVKCDESIAAFARSYANRR------------YGENLAGS   59 (136)
Q Consensus         9 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~W~~~La~~A~~~a~~c------------~Gen~~~~   59 (136)
                      .+++++++.||+.||.+|+.|+                 |.+|+||++||..||.||++|            +||||+..
T Consensus       232 ~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~~~~~~~~GeNl~~~  311 (424)
T 3nt8_A          232 GMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKCVYQHSHGEDRPGLGENIYKT  311 (424)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCSSCCCTTTSTTCEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHHhCcccCCCccccCccceeEEec
Confidence            4556789999999999999985                 559999999999999999999            79999987


Q ss_pred             cCC-----CchhhhhHHhhhhcccCCCCCCC-C------CCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCC
Q 045858           60 SGN-----LSGSDAVGLWVSEKADYDYNSNS-C------NAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASP  127 (136)
Q Consensus        60 ~~~-----~~~~~~v~~W~~e~~~y~~~~~~-~------~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~  127 (136)
                      +..     ..+.++|+.||+|.+.|+|.... +      ..+..++|||||||+++++||||++.|.++ .++||+|+|+
T Consensus       312 ~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~VC~Y~p~  390 (424)
T 3nt8_A          312 SVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVCQYGPG  390 (424)
T ss_dssp             SSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEEEEEEESC
T ss_pred             ccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEEEEEecCC
Confidence            532     25789999999999999987543 1      134579999999999999999999999886 8999999999


Q ss_pred             CCCCCCCCC
Q 045858          128 GDVVGQKPY  136 (136)
Q Consensus       128 gn~~g~~~Y  136 (136)
                      ||+.|++||
T Consensus       391 GN~~g~~~Y  399 (424)
T 3nt8_A          391 GNYMGHVIY  399 (424)
T ss_dssp             CCCTTSBSS
T ss_pred             CCcCCCCCC
Confidence            999999998

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=100.00  E-value=2.9e-36  Score=233.55  Aligned_cols=127  Identities=18%  Similarity=0.293  Sum_probs=111.1

Q ss_pred             CCCCchHHHHHHHHHHHHHhc----------------CCCCceeCHHHHHHHHHHHhhh---------cccceeeec--C
Q 045858            9 SRAQDLPQDYVNAHNAARAQV----------------GVNPVKCDESIAAFARSYANRR---------YGENLAGSS--G   61 (136)
Q Consensus         9 ~~~~~~~~~il~~hN~~R~~~----------------~m~~L~W~~~La~~A~~~a~~c---------~Gen~~~~~--~   61 (136)
                      .++++.|+.||+.||++|+.+                .|.+|+||++||..||.||++|         +||||+...  +
T Consensus        31 ~~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~~C~~~h~~~~~~GeNl~~~~~~~  110 (424)
T 3nt8_A           31 GITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQSCPSGFAGIQGVAQNTMSWSSSG  110 (424)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCTTCCSSCCCCTTCEEEEEEEECTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHhhCCCcCCCCCCceeeEEeccccC
Confidence            344568899999999999999                2889999999999999999999         899998764  2


Q ss_pred             C-----CchhhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 045858           62 N-----LSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        62 ~-----~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      .     ..+.++|+.||+|.+.|++.......+..++|||||||+++++||||++.|.. ..++||+|+|+||+.|++||
T Consensus       111 ~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g~~~Y  189 (424)
T 3nt8_A          111 GYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYITNQPMW  189 (424)
T ss_dssp             CCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCSTTCBSS
T ss_pred             CcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCccccccc
Confidence            1     13678999999999999998644444456899999999999999999999987 59999999999999999998

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=100.00  E-value=2.4e-34  Score=203.37  Aligned_cols=110  Identities=15%  Similarity=0.110  Sum_probs=94.3

Q ss_pred             CCCCchHHHHHHHHHHHHHhcC------------CCCceeCHHHHHHHHHHHhhh------cccceeeecC---CCch--
Q 045858            9 SRAQDLPQDYVNAHNAARAQVG------------VNPVKCDESIAAFARSYANRR------YGENLAGSSG---NLSG--   65 (136)
Q Consensus         9 ~~~~~~~~~il~~hN~~R~~~~------------m~~L~W~~~La~~A~~~a~~c------~Gen~~~~~~---~~~~--   65 (136)
                      .+++++|+.||+.||.+|+.++            |.+|+||++||..||.||+ |      .||||+..++   ....  
T Consensus        13 ~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-C~~~~~~~GeNl~~~sg~~~~~~~~~   91 (206)
T 3s6s_A           13 MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-LPGYADLHHRGVTRFSGDYEGSAISA   91 (206)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-STTHHHHTTCEEEEEEEECSSCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-CCCCCCCCCcEEEEecCCCCccchhH
Confidence            4567789999999999999874            7889999999999999999 9      4999965443   2223  


Q ss_pred             hhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeC----CC-CEEEEEEccCCCCCCCCCCC
Q 045858           66 SDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCN----NG-GTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        66 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~----~~-~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      .++|+.|++|               .++|||||||++|++||||++.|.    .+ .+++||+|+|+|  .|++||
T Consensus        92 ~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~~Y  150 (206)
T 3s6s_A           92 LKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGESF  150 (206)
T ss_dssp             HHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTCCC
T ss_pred             HHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCCCc
Confidence            3899999999               389999999999999999999996    22 589999999988  899998

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.54  E-value=2.4e-14  Score=107.73  Aligned_cols=80  Identities=20%  Similarity=0.266  Sum_probs=72.3

Q ss_pred             hHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh-----------------------------cccceeeecCCCc
Q 045858           14 LPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR-----------------------------YGENLAGSSGNLS   64 (136)
Q Consensus        14 ~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c-----------------------------~Gen~~~~~~~~~   64 (136)
                      +.+++|++||.+|..++++||+||..|++.|+.||+.+                             +||||+.+..  +
T Consensus       220 ~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~~--s  297 (339)
T 4ifa_A          220 NMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHS--D  297 (339)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESCS--S
T ss_pred             HHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeCC--C
Confidence            46789999999999999999999999999999999876                             4899987653  7


Q ss_pred             hhhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEE
Q 045858           65 GSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKV  111 (136)
Q Consensus        65 ~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~  111 (136)
                      +..+|+.|++                +.||+.+|+|+..+.+|+|+.
T Consensus       298 ~~~av~~Wmn----------------SpGHr~NIL~~~~t~iGvGv~  328 (339)
T 4ifa_A          298 GVAALQGWLN----------------SEGHRKNLLNEQFTGLGVGVY  328 (339)
T ss_dssp             HHHHHHHHHT----------------SHHHHHHHTCTTCCEEEEEEE
T ss_pred             HHHHHHHHhC----------------CHhHHHHHhCCCCCEEEEEEE
Confidence            8899999984                379999999999999999997

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.32  E-value=5.6e-12  Score=94.51  Aligned_cols=80  Identities=14%  Similarity=0.171  Sum_probs=71.8

Q ss_pred             hHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh----------------------------cccceeeecCCCch
Q 045858           14 LPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------------------------YGENLAGSSGNLSG   65 (136)
Q Consensus        14 ~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c----------------------------~Gen~~~~~~~~~~   65 (136)
                      ..++||++.|.+|..++++||.||..|+..|+.||..+                            +||||+.+..  ++
T Consensus       205 ~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~~--~~  282 (323)
T 4h0a_A          205 QLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFN--DV  282 (323)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESCC--SH
T ss_pred             HHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCCC--CH
Confidence            35679999999999999999999999999999999887                            5899987654  78


Q ss_pred             hhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEE
Q 045858           66 SDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKV  111 (136)
Q Consensus        66 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~  111 (136)
                      ..+|+.|++                +-||..+|+.+..+.+|+|+.
T Consensus       283 ~~vv~~Wmn----------------SpgHR~NiL~~~~t~iGvGv~  312 (323)
T 4h0a_A          283 PTLIHSWMN----------------SDIHRSRLLNSKYDEMGGDVM  312 (323)
T ss_dssp             HHHHHHHHT----------------SHHHHHHHTCSSCCEEEEEEE
T ss_pred             HHHHHHHHc----------------CHHHHHHHcCCCCCEEEEEEE
Confidence            899999983                368999999999999999986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	136
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	4e-35
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	8e-28
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	2e-26
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	1e-19

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score =  116 bits (290), Expect = 4e-35
 Identities = 70/135 (51%), Positives = 89/135 (65%), Gaps = 10/135 (7%)

Query: 12  QDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------YGENLAGSSG 61
           Q+ PQDY+  HN ARAQVGV P+  D ++A+ A++YAN R           GENLA   G
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGG 60

Query: 62  NLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVG 121
           + +G  AV LWVSE+  Y+Y +N C  GK C HYT VVWRNSVR+GC + RCNNG  F+ 
Sbjct: 61  DFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFIS 120

Query: 122 CNYASPGDVVGQKPY 136
           CNY   G+ +GQ+PY
Sbjct: 121 CNYDPVGNWIGQRPY 135

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 98.4 bits (244), Expect = 8e-28
 Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 25/156 (16%)

Query: 6   ALPSRAQDLPQDYVNAHNAARAQVGVNP-----VKCDESIAAFARSYANR---------- 50
           +   R  ++  + V+ HN+ R  V         ++     A  A  +A R          
Sbjct: 6   SESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYES 65

Query: 51  ------RYGENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSV 104
                 + GEN+  S   +  +D +  W  E  D+ Y   +     V GHYT +VW  S 
Sbjct: 66  RVIEGIKCGENIYMSPYPMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSY 125

Query: 105 RIGCAKVRCNNG--GTFVGCNYASPGDVVGQ--KPY 136
           RIGCA   C +     F  C Y   G+ +G+   PY
Sbjct: 126 RIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY 161

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.6 bits (234), Expect = 2e-26
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 18/144 (12%)

Query: 9   SRAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANR----------------RY 52
           S ++    + + AHN  R + GV P+K  +++   A+ Y+                  + 
Sbjct: 1   SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQC 60

Query: 53  GENLAGSSGNLSGSDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVR 112
           GENLA +S + +G +    W SE  +Y++      +G   GH+T +VW+N+ ++G  K  
Sbjct: 61  GENLAWASYDQTGKEVADRWYSEIKNYNFQQPGFTSG--TGHFTAMVWKNTKKMGVGKAS 118

Query: 113 CNNGGTFVGCNYASPGDVVGQKPY 136
            ++G +FV   Y   G+VV +  +
Sbjct: 119 ASDGSSFVVARYFPAGNVVNEGFF 142

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 78.8 bits (193), Expect = 1e-19
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 39/160 (24%)

Query: 16  QDYVNAHNAARAQVGVNPVKC-----------------DESIAAFARSYANR-------- 50
           QD +  HN  R ++                        ++ +A  A+ +AN+        
Sbjct: 47  QDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTC 106

Query: 51  ------RYGENLAGSSGNL----SGSDAVGLWVSEKADYDYNSNSC-NAGKVCGHYTHVV 99
                 + G+N+A +             V +W  E  DY+       N     GHYT +V
Sbjct: 107 RDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMV 166

Query: 100 WRNSVRIGCAKVRCNNGG---TFVGCNYASPGDVVGQKPY 136
           W N+  +GC  ++         ++ CNY   G+   ++ Y
Sbjct: 167 WANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGNFKNEELY 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	136
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	100.0
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	100.0

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=8.4e-48  Score=255.63  Aligned_cols=125  Identities=56%  Similarity=1.064  Sum_probs=118.5

Q ss_pred             CchHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh----------cccceeeecCCCchhhhhHHhhhhcccCCC
Q 045858           12 QDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------YGENLAGSSGNLSGSDAVGLWVSEKADYDY   81 (136)
Q Consensus        12 ~~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c----------~Gen~~~~~~~~~~~~~v~~W~~e~~~y~~   81 (136)
                      +++.+++|+.||.+|+.++|+||+||++|++.||.||++|          .||||+...++.++.++|+.||+|...|+|
T Consensus         1 ~~~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~~~~~~~GeNi~~~~~~~~~~~av~~W~~E~~~y~~   80 (135)
T d1cfea_           1 QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNY   80 (135)
T ss_dssp             CCSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSSSBCCEECSSSCCHHHHHHHHHTTGGGEEG
T ss_pred             CCcHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCCcccCccccceeccCCCCCHHHHHHHHHhhcccccc
Confidence            4678899999999999999999999999999999999998          899999887788999999999999999999


Q ss_pred             CCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 045858           82 NSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        82 ~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      ..+.+.....++|||||||++|++||||++.|+++..++||+|+|+||+.|++||
T Consensus        81 ~~~~~~~~~~~ghftQmvW~~t~~vGCa~~~c~~~~~~vVC~Y~P~GN~~g~~pY  135 (135)
T d1cfea_          81 ATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY  135 (135)
T ss_dssp             GGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred             ccccCCCCcccchhheeeehhheEeeEEEEEECCCCEEEEEEEeCCCCcCCcCCC
Confidence            9888777778999999999999999999999999889999999999999999999

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-43  Score=234.92  Aligned_cols=125  Identities=29%  Similarity=0.561  Sum_probs=115.5

Q ss_pred             CCCchHHHHHHHHHHHHHhcCCCCceeCHHHHHHHHHHHhhh----------------cccceeeecCCCchhhhhHHhh
Q 045858           10 RAQDLPQDYVNAHNAARAQVGVNPVKCDESIAAFARSYANRR----------------YGENLAGSSGNLSGSDAVGLWV   73 (136)
Q Consensus        10 ~~~~~~~~il~~hN~~R~~~~m~~L~W~~~La~~A~~~a~~c----------------~Gen~~~~~~~~~~~~~v~~W~   73 (136)
                      ++++++++||+.||.+|+.+++++|+||++|++.|+.||++|                .|||++++..+..+.++|+.|+
T Consensus         2 ~~~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~~~~~~~~~v~~W~   81 (149)
T d1smba_           2 ASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWY   81 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecCCCccHHHHHHHHH
Confidence            356789999999999999999999999999999999999887                6999998877778999999999


Q ss_pred             hhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCCCEEEEEEccCCCCCCCCCCC
Q 045858           74 SEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNGGTFVGCNYASPGDVVGQKPY  136 (136)
Q Consensus        74 ~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y  136 (136)
                      +|..+|+|..+.+.  ..++|||||||+++++||||++.|+++..++||+|+|+||+.|+.||
T Consensus        82 ~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCg~a~c~~~~~~~VC~Y~p~GN~~~~~~y  142 (149)
T d1smba_          82 SEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF  142 (149)
T ss_dssp             GGGGGCCTTSCCCC--GGGHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred             HHHhhcccCCCCcc--cccchhhheecCCceEeeEEEEEcCCCCEEEEEEeeCCCCcCCcccc
Confidence            99999999988875  45999999999999999999999998779999999999999999876

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=100.00  E-value=1.3e-41  Score=232.16  Aligned_cols=130  Identities=31%  Similarity=0.578  Sum_probs=116.7

Q ss_pred             ccCCCCchHHHHHHHHHHHHHhcC-----CCCceeCHHHHHHHHHHHhhh----------------cccceeeecCCCch
Q 045858            7 LPSRAQDLPQDYVNAHNAARAQVG-----VNPVKCDESIAAFARSYANRR----------------YGENLAGSSGNLSG   65 (136)
Q Consensus         7 ~~~~~~~~~~~il~~hN~~R~~~~-----m~~L~W~~~La~~A~~~a~~c----------------~Gen~~~~~~~~~~   65 (136)
                      ....+++++++||+.||.+|+.|+     |++|+||.+|+..|+.||++|                .|||++....+..+
T Consensus         7 ~~~~~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~~c~~~~~~~~~~~~~~~~~g~n~~~~~~~~~~   86 (164)
T d1rc9a1           7 ESPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIKCGENIYMSPYPMKW   86 (164)
T ss_dssp             GCTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGGEETTEECEEEEEEESSCCCH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHHHHhhccCCcccccccccccceEEEEecCCCCH
Confidence            344556789999999999999997     677999999999999999999                78888877777789


Q ss_pred             hhhhHHhhhhcccCCCCCCCCCCCccchhHHHHHHHhCCeEeEEEEEeCCC--CEEEEEEccCCCCCCCC--CCC
Q 045858           66 SDAVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKVRCNNG--GTFVGCNYASPGDVVGQ--KPY  136 (136)
Q Consensus        66 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~ftq~iw~~~~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y  136 (136)
                      .++|+.||+|..+|+|..+.+..+..++|||||||+++++||||++.|.++  ..++||+|+|+||+.|+  +||
T Consensus        87 ~~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa~~~c~~~~~~~~vVC~Y~P~GN~~g~~~~~Y  161 (164)
T d1rc9a1          87 TDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCAAAYCPSSPYSYFFVCQYCPAGNFIGKTATPY  161 (164)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTCTTCSS
T ss_pred             HHHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEEEEEeCCCCceEEEEEEEcCCCccCCCcCCCc
Confidence            999999999999999998777777779999999999999999999999876  57999999999999997  567

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=100.00  E-value=8.4e-40  Score=230.68  Aligned_cols=129  Identities=24%  Similarity=0.469  Sum_probs=112.4

Q ss_pred             cCCCCchHHHHHHHHHHHHHhcC-----------------CCCceeCHHHHHHHHHHHhhh--------------cccce
Q 045858            8 PSRAQDLPQDYVNAHNAARAQVG-----------------VNPVKCDESIAAFARSYANRR--------------YGENL   56 (136)
Q Consensus         8 ~~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~W~~~La~~A~~~a~~c--------------~Gen~   56 (136)
                      ..+++++|++||+.||.+|+.++                 |.+|+||++||..||.||++|              +|||+
T Consensus        39 ~~~t~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~~C~~~~~~~~~~~~~~~Gen~  118 (209)
T d1qnxa_          39 YGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNV  118 (209)
T ss_dssp             ESCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCCCCSSSCCEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHhhcccCCCcccCCCCCCCccee
Confidence            34567899999999999999862                 889999999999999999999              69999


Q ss_pred             eeecC----CCchhhhhHHhhhhcccCCCCCCCCCC-CccchhHHHHHHHhCCeEeEEEEEeCCC---CEEEEEEccCCC
Q 045858           57 AGSSG----NLSGSDAVGLWVSEKADYDYNSNSCNA-GKVCGHYTHVVWRNSVRIGCAKVRCNNG---GTFVGCNYASPG  128 (136)
Q Consensus        57 ~~~~~----~~~~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~~ftq~iw~~~~~vGCa~~~c~~~---~~~~vC~Y~p~g  128 (136)
                      +....    ...+.++|+.|++|...|++..+.... +..++|||||||+++++||||++.|..+   ..++||+|+|+|
T Consensus       119 ~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa~~~c~~~~~~~~~vVC~Y~p~G  198 (209)
T d1qnxa_         119 ALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSG  198 (209)
T ss_dssp             EEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred             eecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEEEEEEcCCCCCEEEEEEEECCCC
Confidence            87542    246889999999999999988765543 3469999999999999999999999765   478999999999


Q ss_pred             CCCCCCCC
Q 045858          129 DVVGQKPY  136 (136)
Q Consensus       129 n~~g~~~Y  136 (136)
                      |+.|++||
T Consensus       199 N~~g~~~Y  206 (209)
T d1qnxa_         199 NFKNEELY  206 (209)
T ss_dssp             CCTTSCSS
T ss_pred             CCCCCCCC
Confidence            99999999