Citrus Sinensis ID: 045909


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
METLGCNISLLLLQAFLLFLILSLTFSSPFTEKHVDVASFFSTFETRNVRVAQFFINASSSPPQVSSSNFSLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLLPL
cccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHcccEEEEEcccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEEEEEccEEcccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccHHHHHHHHccccccc
cccccccHHHHHHHHHHHHHHHHHHcccccccccccccHHcccccccccccccccccccccccccccccccHHHHcccccHHHccccccccHHHHHHHHHHHHHHcccEccccccccccccccccccHcccccHHHHHHHcEEEEEccccccccccccccccEEHHHHHHHHHHcccccEEEccccccEEEEEEccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccccHHHHcccccEEccc
METLGCNISLLLLQAFLLFLILSltfsspftekhvdvasffsTFETRNVRVAQFFInasssppqvsssnFSLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIHLqnytshshrtetfiptgsiyknashTEMVKKFKVWIYkegehptvhigpmhnkyaiegqfidemesknnpfrashpdeahafflpfSVANVVQYVyqpittvkdYSRDRLQRLLTDYVTVVadkypywnrsngadhfmvSCHDWVSTYIYVLLNLLLPL
METLGCNISLLLLQAFLLFLILSLTFSSPFTEKHVDVASFFSTFETRNVRVAQFFINAsssppqvssSNFSLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIhlqnytshshrtetfiptgsiyknasHTEMVKKFKVWIYKEGehptvhigpmhNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLLPL
METLGCNIsllllqafllflilsltfsspfTEKHVDVASFFSTFETRNVRVAQFFINAsssppqvsssnfsLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVllnlllpl
***LGCNISLLLLQAFLLFLILSLTFSSPFTEKHVDVASFFSTFETRNVRVAQFFIN************FSLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFID****************AHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLL**
******N*SLLLLQAFLLFLILSLTFSSP*****************************************************************************************TETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLLPL
METLGCNISLLLLQAFLLFLILSLTFSSPFTEKHVDVASFFSTFETRNVRVAQFFINAS*********NFSLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLLPL
**TLGCNISLLLLQAFLLFLILSLTFSSPFTEKHVDVASFFSTFETRNVRVAQFFI********************************SIRVEEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLLPL
iiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
METLGCNISLLLLQAFLLFLILSLTFSSPFTEKHVDVASFFSTFETRNVRVAQFFINASSSPPQVSSSNFSLATALYNSSINKFYKARSIRVEEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNASHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLLPL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query268 2.2.26 [Sep-21-2011]
Q3E9A4 466 Probable glycosyltransfer yes no 0.705 0.405 0.518 3e-56
Q3EAR7 470 Probable glycosyltransfer no no 0.660 0.376 0.577 7e-51
Q9LFP3 480 Probable glycosyltransfer no no 0.593 0.331 0.5 3e-47
Q94AA9 500 Xylogalacturonan beta-1,3 no no 0.899 0.482 0.435 9e-45
Q3E7Q9 480 Probable glycosyltransfer no no 0.570 0.318 0.437 2e-35
Q9SSE8 470 Probable glycosyltransfer no no 0.608 0.346 0.406 2e-34
Q9FFN2 518 Probable glycosyltransfer no no 0.570 0.295 0.434 4e-33
Q33AH8 417 Probable glucuronosyltran no no 0.268 0.172 0.316 5e-06
Q10SX7 427 Probable glucuronosyltran no no 0.261 0.163 0.384 8e-06
Q940Q8 415 Probable beta-1,4-xylosyl no no 0.261 0.168 0.303 2e-05
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function desciption
 Score =  218 bits (556), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/214 (51%), Positives = 152/214 (71%), Gaps = 25/214 (11%)

Query: 55  FINASSSPPQ----------VSSSNFSLATALYNSSINKFYKARSIRVEEDLAQARAAIR 104
           F++A+S  P           V+SSN S  ++   +  NK    R+I +EE LA++R+AIR
Sbjct: 43  FVDATSLAPSPSPSLSMEFSVASSNLSTISSPPENKGNK----RNI-IEEGLAKSRSAIR 97

Query: 105 KAIHLQNYTSHSHRTETFIPTGSIYKNA-----SHTEMVKKFKVWIYKEGEHPTVHIGPM 159
           +A+ L+ + S   + ETF+P G++Y+NA     SH EM KKFKVW+Y+EGE P VH+GPM
Sbjct: 98  EAVRLKKFVSD--KEETFVPRGAVYRNAFAFHQSHIEMEKKFKVWVYREGETPLVHMGPM 155

Query: 160 HNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRL 219
           +N Y+IEGQF+DE+E+  +PF A++P+EAHAF LP SVAN+V Y+Y+P+ T   YSR++L
Sbjct: 156 NNIYSIEGQFMDEIETGMSPFAANNPEEAHAFLLPVSVANIVHYLYRPLVT---YSREQL 212

Query: 220 QRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDW 253
            ++  DYV VVA KYPYWNRS GADHF VSCHDW
Sbjct: 213 HKVFLDYVDVVAHKYPYWNRSLGADHFYVSCHDW 246




May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2 Back     alignment and function description
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function description
>sp|Q33AH8|GT101_ORYSJ Probable glucuronosyltransferase GUT1 OS=Oryza sativa subsp. japonica GN=GUT1 PE=2 SV=2 Back     alignment and function description
>sp|Q10SX7|GT31_ORYSJ Probable glucuronosyltransferase Os03g0107900 OS=Oryza sativa subsp. japonica GN=Os03g0107900 PE=2 SV=1 Back     alignment and function description
>sp|Q940Q8|IX10L_ARATH Probable beta-1,4-xylosyltransferase IRX10L OS=Arabidopsis thaliana GN=IRX10L PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
356546130 468 PREDICTED: probable glycosyltransferase 0.675 0.386 0.619 1e-60
356565153 398 PREDICTED: probable glycosyltransferase 0.600 0.404 0.666 6e-60
359484716 477 PREDICTED: probable glycosyltransferase 0.910 0.511 0.509 7e-59
357478279 617 Xylogalacturonan beta-1,3-xylosyltransfe 0.626 0.272 0.621 1e-58
356546126 490 PREDICTED: xylogalacturonan beta-1,3-xyl 0.929 0.508 0.476 2e-57
449443279 447 PREDICTED: probable glycosyltransferase 0.574 0.344 0.598 8e-56
356565155 496 PREDICTED: xylogalacturonan beta-1,3-xyl 0.600 0.324 0.605 9e-56
334187794 458 Exostosin family protein [Arabidopsis th 0.705 0.412 0.518 2e-54
292630785 466 RecName: Full=Probable glycosyltransfera 0.705 0.405 0.518 2e-54
297818734 422 exostosin family protein [Arabidopsis ly 0.593 0.376 0.605 2e-54
>gi|356546130|ref|XP_003541484.1| PREDICTED: probable glycosyltransferase At5g20260-like [Glycine max] Back     alignment and taxonomy information
 Score =  239 bits (609), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/189 (61%), Positives = 145/189 (76%), Gaps = 8/189 (4%)

Query: 72  LATALYNSSINKFYKARSIRV-EEDLAQARAAIRKAIHLQNYTSHSHRTETFIPTGSIYK 130
           LA + Y S  ++  K  S  V EE LA+ARA+IR+AI  +N+ S+S + E FIP GSIY+
Sbjct: 59  LANSAYRSLEHRIKKRTSFDVVEEGLAKARASIREAILSRNH-SNSGKQEDFIPKGSIYR 117

Query: 131 NA-----SHTEMVKKFKVWIYKEGEHPTVHIGPMHNKYAIEGQFIDEME-SKNNPFRASH 184
           N      SH EMVK+FKVW+Y+EG+ P VH GP+++ YAIEGQFIDEM+ SK +PF+A +
Sbjct: 118 NPHAFHQSHIEMVKRFKVWVYEEGDQPLVHYGPVNDIYAIEGQFIDEMDNSKRSPFKAKN 177

Query: 185 PDEAHAFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGAD 244
           PDEAHAFFLPFSV NVV Y Y+P  +  DY RDRLQRL+ DY+ VVADKYPYWNRSNGAD
Sbjct: 178 PDEAHAFFLPFSVVNVVHYAYKPYMSQNDYRRDRLQRLVEDYIVVVADKYPYWNRSNGAD 237

Query: 245 HFMVSCHDW 253
           HF++SCHDW
Sbjct: 238 HFLLSCHDW 246




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356565153|ref|XP_003550809.1| PREDICTED: probable glycosyltransferase At5g20260-like [Glycine max] Back     alignment and taxonomy information
>gi|359484716|ref|XP_002263848.2| PREDICTED: probable glycosyltransferase At5g20260-like [Vitis vinifera] gi|296084516|emb|CBI25537.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357478279|ref|XP_003609425.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula] gi|355510480|gb|AES91622.1| Xylogalacturonan beta-1,3-xylosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356546126|ref|XP_003541482.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|449443279|ref|XP_004139407.1| PREDICTED: probable glycosyltransferase At3g42180-like [Cucumis sativus] gi|449494024|ref|XP_004159425.1| PREDICTED: probable glycosyltransferase At3g42180-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356565155|ref|XP_003550810.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|334187794|ref|NP_197526.5| Exostosin family protein [Arabidopsis thaliana] gi|332005439|gb|AED92822.1| Exostosin family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|292630785|sp|Q3E9A4.3|GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 Back     alignment and taxonomy information
>gi|297818734|ref|XP_002877250.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297323088|gb|EFH53509.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
TAIR|locus:2100814 470 AT3G42180 "AT3G42180" [Arabido 0.791 0.451 0.506 8.9e-54
TAIR|locus:2145924 500 XGD1 "AT5G33290" [Arabidopsis 0.600 0.322 0.540 1.3e-45
TAIR|locus:1009023450 518 AT5G03795 [Arabidopsis thalian 0.570 0.295 0.446 4.6e-34
TAIR|locus:2091122 470 AT3G07620 "AT3G07620" [Arabido 0.615 0.351 0.417 7.4e-34
TAIR|locus:2145472 480 AT5G25310 "AT5G25310" [Arabido 0.570 0.318 0.437 9.5e-34
TAIR|locus:2145254 654 AT5G25820 "AT5G25820" [Arabido 0.451 0.185 0.421 6.9e-22
TAIR|locus:2125687 593 AT4G32790 "AT4G32790" [Arabido 0.585 0.264 0.337 1.4e-20
TAIR|locus:2144231 546 AT5G11610 "AT5G11610" [Arabido 0.634 0.311 0.333 1.9e-20
TAIR|locus:2152632 547 AT5G37000 "AT5G37000" [Arabido 0.429 0.210 0.396 1.3e-18
TAIR|locus:2120933 425 AT4G38040 "AT4G38040" [Arabido 0.705 0.444 0.288 2.9e-16
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
 Identities = 114/225 (50%), Positives = 146/225 (64%)

Query:    41 FSTFETRNVRVAQFFINAXXXXX---XXXXXXXXLATALYNSSINKFYKARSIRVEEDLA 97
             FS+F        QFF +                  +++LY+  I    ++   + EE+L 
Sbjct:    27 FSSFPNNESPPQQFFSSLTMSSLLVHTNALQSSSSSSSLYSPPITVKRRSNLEKREEELR 86

Query:    98 QARAAIRKAIHLQNYTSHSHRTETFIPTGSIYKNA-----SHTEMVKKFKVWIYKEGEHP 152
             +ARAAIR+A+  +N TS+     T+IPTG IY+N+     SH EM+K FKVW YKEGE P
Sbjct:    87 KARAAIRRAVRFKNCTSNEE-VITYIPTGQIYRNSFAFHQSHIEMMKTFKVWSYKEGEQP 145

Query:   153 TVHIGPMHNKYAIEGQFIDE----MESKNNPFRASHPDEAHAFFLPFSVANVVQYVYQPI 208
              VH GP+++ Y IEGQFIDE    M   +  FRAS P+EAHAFFLPFSVAN+V YVYQPI
Sbjct:   146 LVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFFLPFSVANIVHYVYQPI 205

Query:   209 TTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDW 253
             T+  D++R RL R+  DYV VVA K+P+WN+SNGADHFMVSCHDW
Sbjct:   206 TSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHDW 250




GO:0003824 "catalytic activity" evidence=ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0016020 "membrane" evidence=IEA;ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
pfam03016 292 pfam03016, Exostosin, Exostosin family 5e-15
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information
 Score = 72.9 bits (179), Expect = 5e-15
 Identities = 35/135 (25%), Positives = 52/135 (38%), Gaps = 21/135 (15%)

Query: 137 MVKKFKVWIY-------KEGEHPTVHIGPMHNKYAIEGQFIDEMESKNNPFRASHPDEAH 189
             K  KV++Y          +        + ++YA E      +   N+  R   PDEA 
Sbjct: 1   SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSIL--NSRCRTLDPDEAD 58

Query: 190 AFFLPFSVANVVQYVYQPITTVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVS 249
            FF+PF  +     V           RD L   L +++       PYWNRS G DH +V+
Sbjct: 59  LFFVPFYTSL---SVGTNAV-----ERDLLPSELVEWLE----SLPYWNRSGGRDHIIVN 106

Query: 250 CHDWVSTYIYVLLNL 264
            H +  +    L  L
Sbjct: 107 SHPFGGSAFDRLPAL 121


The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 268
KOG1021 464 consensus Acetylglucosaminyltransferase EXT1/exost 99.93
PF03016 302 Exostosin: Exostosin family; InterPro: IPR004263 H 99.89
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 84.62
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
Probab=99.93  E-value=2.6e-26  Score=224.47  Aligned_cols=123  Identities=37%  Similarity=0.652  Sum_probs=108.3

Q ss_pred             ChHHhhccCeEEEecCCCCCccccC--CCCCCchhHHHHHHHHhhcCCCcccCCcCCcceEEEeeecceee-eeeecccc
Q 045909          133 SHTEMVKKFKVWIYKEGEHPTVHIG--PMHNKYAIEGQFIDEMESKNNPFRASHPDEAHAFFLPFSVANVV-QYVYQPIT  209 (268)
Q Consensus       133 sY~eMe~~lKIYVY~eg~~p~~h~~--p~~~iYssEg~F~~eL~~~~s~fRT~DPeeAhlFFVPfs~~~l~-~~ly~p~~  209 (268)
                      +|..|++.+|+|+|.+|+.+.+|.+  +++++|+.|++|+..|+.+.++|||.||+|||+||||||+++.+ ++++.++.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~  186 (464)
T KOG1021|consen  107 SYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDE  186 (464)
T ss_pred             hhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEehhhhcccCCc
Confidence            9999999999999999988899987  78999999999999997435789999999999999999999876 66677653


Q ss_pred             CCCCcchHHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHH
Q 045909          210 TVKDYSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIY  259 (268)
Q Consensus       210 ~~~~~~~~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~  259 (268)
                      .    ....+...+.+||..+.++||||||++|+|||+|+|||||.+...
T Consensus       187 ~----~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~  232 (464)
T KOG1021|consen  187 R----VNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRR  232 (464)
T ss_pred             c----cchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeec
Confidence            2    334567778888888889999999999999999999999998874



>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00