Citrus Sinensis ID: 045912

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------22
GPYSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPENVK
ccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccEEEEcccccEEEEEEccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHcccccccccccccccEEEEEccccccccccccccccccccccccEEEEEEEEEccccccccccc
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHcccHHHHHHHHHHHHHHcccEEEccccccEEEEEEccccccEEEEEEcccccccHHcccccccccccccEccccccHHHHHHHHHHHHHHHHcccccEEEEEEccccccccHHHHHHccHHHcccHHHHHHHHHHHHHHHHccccccccEEEccccccccHHHHHHHHHccEEEEcccccc
GPYSLDEAFADQILIETERDKNWLISIRRQIhenpelrfevhnTNALIRSELDklgityscplvktgivakigsgshpfialradmdalplqelvnwehkskidgkmhacghdapttmLLGEAKLLHRRKDQLnaadvispraefggtlrslTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDfqveefplipaaldndsLYLLVERVgksllgpenvk
GPYSLDEAFADQILIETERDKNWLISIRRQihenpelrfeVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLnaadvispraefggtlrsLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERvgksllgpenvk
GPYSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPENVK
*******AFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGK*********
***********QILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGK*********
GPYSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPENVK
**YSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGP****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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GPYSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPENVK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query218 2.2.26 [Sep-21-2011]
O81641 428 IAA-amino acid hydrolase yes no 0.692 0.352 0.627 3e-50
Q9SWX9 435 IAA-amino acid hydrolase no no 0.623 0.312 0.528 1e-39
O04373 440 IAA-amino acid hydrolase no no 0.623 0.309 0.528 1e-39
Q8VYX0 464 IAA-amino acid hydrolase no no 0.688 0.323 0.545 7e-39
Q8S9S4 442 IAA-amino acid hydrolase yes no 0.619 0.305 0.525 1e-38
Q84XG9 442 IAA-amino acid hydrolase N/A no 0.619 0.305 0.525 1e-38
Q7XUA8 426 IAA-amino acid hydrolase no no 0.669 0.342 0.496 2e-37
P54970 439 IAA-amino acid hydrolase no no 0.472 0.234 0.593 2e-37
Q5N8F2 456 IAA-amino acid hydrolase no no 0.614 0.293 0.522 4e-36
Q8H3C8 444 IAA-amino acid hydrolase no no 0.513 0.252 0.605 1e-35
>sp|O81641|ILL3_ARATH IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1 Back     alignment and function desciption
 Score =  198 bits (503), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 96/153 (62%), Positives = 114/153 (74%), Gaps = 2/153 (1%)

Query: 6   DEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVK 65
           D+ + +Q L E   DK WL+S+RRQIHENPEL FE+H T+ALIR ELD+LG++YS P+ K
Sbjct: 23  DQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAK 82

Query: 66  TGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKL 125
           TGIVA+IGSG  P +ALRADMDALPLQELV W+HKSKIDGKMHACGHD+ TTMLLG AKL
Sbjct: 83  TGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKL 142

Query: 126 LHRRKDQLNAAD--VISPRAEFGGTLRSLTTEG 156
           L +RK  LN     +  P  E G     +  EG
Sbjct: 143 LSKRKRMLNGTVRLLFQPAEEGGAGAFHMIKEG 175
Hydrolyzes certain amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA).
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 1EC: .EC: -
>sp|Q9SWX9|ILL5_ARATH IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1 Back     alignment and function description
>sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2 Back     alignment and function description
>sp|Q8VYX0|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6 OS=Arabidopsis thaliana GN=ILL6 PE=2 SV=2 Back     alignment and function description
>sp|Q8S9S4|ILL1_ORYSJ IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q84XG9|ILL1_ORYSI IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUA8|ILL5_ORYSJ IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1 Back     alignment and function description
>sp|P54970|ILL2_ARATH IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2 Back     alignment and function description
>sp|Q5N8F2|ILL2_ORYSJ IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1 Back     alignment and function description
>sp|Q8H3C8|ILL8_ORYSJ IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query218
388511211 426 unknown [Lotus japonicus] 0.596 0.305 0.723 3e-50
224118492 432 iaa-amino acid hydrolase 6 [Populus tric 0.688 0.347 0.644 5e-50
224134985 404 iaa-amino acid hydrolase 5 [Populus tric 0.688 0.371 0.644 1e-49
49524066 432 putative auxin-amidohydrolase precursor 0.688 0.347 0.638 3e-49
225455181 424 PREDICTED: IAA-amino acid hydrolase ILR1 0.596 0.306 0.712 4e-49
269980523 432 IAA-amino acid hydrolase [Populus toment 0.688 0.347 0.638 7e-49
49524064 431 putative auxin-amidohydrolase precursor 0.688 0.348 0.631 8e-49
15239551 428 IAA-amino acid hydrolase ILR1-like 3 [Ar 0.692 0.352 0.627 2e-48
297792839 429 hypothetical protein ARALYDRAFT_495494 [ 0.692 0.351 0.627 3e-48
357464257 420 IAA-amino acid hydrolase ILR1-like prote 0.591 0.307 0.674 3e-47
>gi|388511211|gb|AFK43667.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/130 (72%), Positives = 111/130 (85%)

Query: 6   DEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVK 65
           D+ +A  IL    +DK+WL+ +RR+IHE+PEL FE HNT+ALIRSELDKLGITY+ P+ K
Sbjct: 27  DDDYAKAILSAANKDKDWLVQVRREIHEHPELGFEEHNTSALIRSELDKLGITYTYPVAK 86

Query: 66  TGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKL 125
           TGIVA+IGSGS P IA+RADMDALPLQELV WEHKSKIDG+MHACGHDA TTMLLG AKL
Sbjct: 87  TGIVAQIGSGSRPIIAIRADMDALPLQELVEWEHKSKIDGRMHACGHDAHTTMLLGAAKL 146

Query: 126 LHRRKDQLNA 135
           LH+R+D+L  
Sbjct: 147 LHQRQDKLQG 156

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224118492|ref|XP_002317832.1| iaa-amino acid hydrolase 6 [Populus trichocarpa] gi|118487016|gb|ABK95339.1| unknown [Populus trichocarpa] gi|222858505|gb|EEE96052.1| iaa-amino acid hydrolase 6 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224134985|ref|XP_002321954.1| iaa-amino acid hydrolase 5 [Populus trichocarpa] gi|222868950|gb|EEF06081.1| iaa-amino acid hydrolase 5 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|49524066|emb|CAG32960.1| putative auxin-amidohydrolase precursor [Populus tremula x Populus alba] Back     alignment and taxonomy information
>gi|225455181|ref|XP_002269226.1| PREDICTED: IAA-amino acid hydrolase ILR1-like 5-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|269980523|gb|ACZ56436.1| IAA-amino acid hydrolase [Populus tomentosa] Back     alignment and taxonomy information
>gi|49524064|emb|CAG32959.1| putative auxin-amidohydrolase precursor [Populus euphratica] Back     alignment and taxonomy information
>gi|15239551|ref|NP_200225.1| IAA-amino acid hydrolase ILR1-like 3 [Arabidopsis thaliana] gi|75220092|sp|O81641.1|ILL3_ARATH RecName: Full=IAA-amino acid hydrolase ILR1-like 3; Flags: Precursor gi|3420801|gb|AAC31939.1| IAA-amino acid hydrolase homolog ILL3 [Arabidopsis thaliana] gi|10178163|dbj|BAB11576.1| IAA-amino acid hydrolase homolog ILL3 [Arabidopsis thaliana] gi|332009073|gb|AED96456.1| IAA-amino acid hydrolase ILR1-like 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297792839|ref|XP_002864304.1| hypothetical protein ARALYDRAFT_495494 [Arabidopsis lyrata subsp. lyrata] gi|297310139|gb|EFH40563.1| hypothetical protein ARALYDRAFT_495494 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357464257|ref|XP_003602410.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] gi|95106139|gb|ABF55221.1| auxin conjugate hydrolase [Medicago truncatula] gi|355491458|gb|AES72661.1| IAA-amino acid hydrolase ILR1-like protein [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query218
TAIR|locus:2166557 428 ILL3 "AT5G54140" [Arabidopsis 0.651 0.331 0.664 2.6e-65
TAIR|locus:2017577 435 ILL5 "AT1G51780" [Arabidopsis 0.623 0.312 0.521 1.5e-37
TAIR|locus:2017607 440 IAR3 "AT1G51760" [Arabidopsis 0.623 0.309 0.528 1.9e-37
TAIR|locus:2823614 464 ILL6 "IAA-leucine resistant (I 0.688 0.323 0.545 1.9e-37
TAIR|locus:2164976 439 ILL2 "AT5G56660" [Arabidopsis 0.619 0.307 0.540 3.1e-35
TAIR|locus:2075382 442 ILR1 "AT3G02875" [Arabidopsis 0.610 0.300 0.551 2e-33
TAIR|locus:2165076 438 ILL1 "AT5G56650" [Arabidopsis 0.610 0.303 0.518 1.8e-32
TIGR_CMR|CJE_0708 396 CJE_0708 "carboxypeptidase" [C 0.614 0.338 0.446 8.9e-23
TIGR_CMR|SPO_2468 387 SPO_2468 "amidohydrolase famil 0.775 0.436 0.377 1e-20
TIGR_CMR|SPO_2808 387 SPO_2808 "amidohydrolase famil 0.596 0.335 0.429 5e-20
TAIR|locus:2166557 ILL3 "AT5G54140" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 489 (177.2 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
 Identities = 95/143 (66%), Positives = 113/143 (79%)

Query:     6 DEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVK 65
             D+ + +Q L E   DK WL+S+RRQIHENPEL FE+H T+ALIR ELD+LG++YS P+ K
Sbjct:    23 DQEYPNQYLTEALGDKEWLVSVRRQIHENPELLFELHKTSALIRRELDELGVSYSYPVAK 82

Query:    66 TGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKL 125
             TGIVA+IGSG  P +ALRADMDALPLQELV W+HKSKIDGKMHACGHD+ TTMLLG AKL
Sbjct:    83 TGIVAQIGSGYPPVVALRADMDALPLQELVEWDHKSKIDGKMHACGHDSHTTMLLGAAKL 142

Query:   126 LHRRKDQLNAA-DVISPRAEFGG 147
             L +RK  LN    ++   AE GG
Sbjct:   143 LSKRKRMLNGTVRLLFQPAEEGG 165
GO:0006508 "proteolysis" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008237 "metallopeptidase activity" evidence=ISS
GO:0016787 "hydrolase activity" evidence=IEA
GO:0009850 "auxin metabolic process" evidence=ISS
GO:0010178 "IAA-amino acid conjugate hydrolase activity" evidence=ISS
TAIR|locus:2017577 ILL5 "AT1G51780" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017607 IAR3 "AT1G51760" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2823614 ILL6 "IAA-leucine resistant (ILR)-like gene 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164976 ILL2 "AT5G56660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075382 ILR1 "AT3G02875" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165076 ILL1 "AT5G56650" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CJE_0708 CJE_0708 "carboxypeptidase" [Campylobacter jejuni RM1221 (taxid:195099)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2468 SPO_2468 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2808 SPO_2808 "amidohydrolase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query218
cd08017 377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 1e-66
PLN02280 478 PLN02280, PLN02280, IAA-amino acid hydrolase 4e-52
cd03886 372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 6e-50
PLN02693 437 PLN02693, PLN02693, IAA-amino acid hydrolase 2e-46
COG1473 392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 2e-43
cd05669 372 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoac 1e-41
cd05666 373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 1e-41
cd08019 372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 5e-41
TIGR01891 363 TIGR01891, amidohydrolases, amidohydrolase 2e-39
cd08660 363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 4e-37
cd08014 372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 4e-32
cd08017377 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-aceti 2e-30
cd05664 398 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylas 1e-28
cd05667 402 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylas 2e-28
cd08018 365 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoac 2e-23
cd05670 367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 3e-22
cd05668 374 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylas 6e-20
cd05665 415 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Amin 6e-17
cd03887 358 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1- 6e-15
PLN02280478 PLN02280, PLN02280, IAA-amino acid hydrolase 6e-13
cd05673 434 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacyla 6e-13
cd09849 388 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacy 4e-12
PLN02693437 PLN02693, PLN02693, IAA-amino acid hydrolase 2e-11
cd05672 358 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacyla 3e-11
cd03873237 cd03873, Zinc_peptidase_like, Zinc peptidases M18, 1e-09
cd03886372 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 fa 1e-08
pfam01546 310 pfam01546, Peptidase_M20, Peptidase family M20/M25 4e-08
TIGR01891363 TIGR01891, amidohydrolases, amidohydrolase 2e-07
cd05666373 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylas 6e-07
COG1473392 COG1473, AbgB, Metal-dependent amidase/aminoacylas 5e-06
cd05670367 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoac 7e-05
cd08019372 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoa 3e-04
cd08660363 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 3e-04
cd08014372 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylas 4e-04
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information 
 Score =  209 bits (534), Expect = 1e-66
 Identities = 81/111 (72%), Positives = 89/111 (80%)

Query: 24  LISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALR 83
           L+ IRR+IHENPEL FE H T+ALIR ELD LGI Y  P+ KTGIVA IGSGS P +ALR
Sbjct: 1   LVRIRREIHENPELAFEEHETSALIRRELDALGIPYRYPVAKTGIVATIGSGSPPVVALR 60

Query: 84  ADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLN 134
           ADMDALP+QELV WEHKSK+DGKMHACGHDA  TMLLG AKLL  R+  L 
Sbjct: 61  ADMDALPIQELVEWEHKSKVDGKMHACGHDAHVTMLLGAAKLLKAREHLLK 111

Peptidase M20 family, Plant Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase (IAA-Asp hydrolase; IAAspH; IAAH; IAA amidohydrolase; EC 3.5.1.-) subfamily. IAAspH hydrolyzes indole-3-acetyl-N-aspartic acid (IAA or auxin) to indole-3-acetic acid. Genes encoding IAA-amidohydrolases were first cloned from Arabidopsis; ILR1, IAR3, ILL1 and ILL2 encode active IAA- amino acid hydrolases, and three additional amidohydrolase-like genes (ILL3, ILL5, ILL6) have been isolated. In higher plants, the growth regulator indole-3-acetic acid (IAA or auxin) is found both free and conjugated via amide bonding to a variety of amino acids and peptides, and via an ester linkage to carbohydrates. IAA-Asp conjugates are involved in homeostatic control, protection, storing and subsequent use of free IAA. IAA-Asp is also found in some plants as a unique intermediate for entering into IAA non-decarboxylative oxidative pathway. IAA amidohydrolase cleaves the amide bond between the auxin and the conjugated amino acid. Enterobacter agglomerans IAAspH has very strong enzyme activity and substrate specificity towards IAA-Asp, although its substrate affinity is weaker compared to Arabidopsis enzymes of the ILR1 gene family. Enhanced IAA-hydrolase activity has been observed during clubroot disease in Chinese cabbage. Length = 377
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|193545 cd05669, M20_Acy1_YxeP_like, M20 Peptidase Aminoacyclase-1 YxeP-like proteins, including YxeP, YtnL, YjiB and HipO2 Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193564 cd08017, M20_IAA_Hyd, M20 Peptidase Indole-3-acetic acid amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193540 cd05664, M20_Acy1_like6, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193543 cd05667, M20_Acy1_like2, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193565 cd08018, M20_Acy1_amhX_like, M20 Peptidase Aminoacylase 1 amhX_like subfamily Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193544 cd05668, M20_Acy1_like3, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193541 cd05665, M20_Acy1_IAAspH_bact, M20 Peptidases Aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase from bacteria and archaea Back     alignment and domain information
>gnl|CDD|193508 cd03887, M20_Acy1L2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|215158 PLN02280, PLN02280, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193548 cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily Back     alignment and domain information
>gnl|CDD|193573 cd09849, M20_Acy1L2_like_2, M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family Back     alignment and domain information
>gnl|CDD|178296 PLN02693, PLN02693, IAA-amino acid hydrolase Back     alignment and domain information
>gnl|CDD|193547 cd05672, M20_ACY1L2_like, M20 Peptidase Aminoacylase 1-like protein 2-like, amidohydrolase subfamily Back     alignment and domain information
>gnl|CDD|193495 cd03873, Zinc_peptidase_like, Zinc peptidases M18, M20, M28, and M42 Back     alignment and domain information
>gnl|CDD|193507 cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family Back     alignment and domain information
>gnl|CDD|216562 pfam01546, Peptidase_M20, Peptidase family M20/M25/M40 Back     alignment and domain information
>gnl|CDD|233621 TIGR01891, amidohydrolases, amidohydrolase Back     alignment and domain information
>gnl|CDD|193542 cd05666, M20_Acy1_like1, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|224390 COG1473, AbgB, Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information
>gnl|CDD|193546 cd05670, M20_Acy1_YkuR_like, M20 Peptidase Aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins Back     alignment and domain information
>gnl|CDD|193566 cd08019, M20_Acy1_subfamily5, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information
>gnl|CDD|193571 cd08660, M20_Acy1_like, M20 Peptidase Aminoacylase 1-like family Back     alignment and domain information
>gnl|CDD|193562 cd08014, M20_Acy1_like4, M20 Peptidase Aminoacylase 1 subfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 218
COG1473392 AbgB Metal-dependent amidase/aminoacylase/carboxyp 100.0
PLN02693437 IAA-amino acid hydrolase 100.0
PLN02280478 IAA-amino acid hydrolase 100.0
PRK06915422 acetylornithine deacetylase; Validated 100.0
TIGR01891363 amidohydrolases amidohydrolase. This model represe 100.0
PRK08588377 succinyl-diaminopimelate desuccinylase; Reviewed 99.97
PRK13013427 succinyl-diaminopimelate desuccinylase; Reviewed 99.97
PRK06837427 acetylornithine deacetylase; Provisional 99.97
TIGR03526395 selenium_YgeY putative selenium metabolism hydrola 99.97
TIGR03320395 ygeY M20/DapE family protein YgeY. Members of this 99.96
PRK07522385 acetylornithine deacetylase; Provisional 99.96
PRK13004399 peptidase; Reviewed 99.96
PRK06133410 glutamate carboxypeptidase; Reviewed 99.96
PRK07338402 hypothetical protein; Provisional 99.96
PRK13009375 succinyl-diaminopimelate desuccinylase; Reviewed 99.96
PRK05111383 acetylornithine deacetylase; Provisional 99.96
TIGR01246370 dapE_proteo succinyl-diaminopimelate desuccinylase 99.96
PRK13983400 diaminopimelate aminotransferase; Provisional 99.96
TIGR01910375 DapE-ArgE acetylornithine deacetylase or succinyl- 99.96
PRK08596421 acetylornithine deacetylase; Validated 99.96
PRK08651394 succinyl-diaminopimelate desuccinylase; Reviewed 99.95
TIGR01892364 AcOrn-deacetyl acetylornithine deacetylase (ArgE). 99.95
TIGR01883361 PepT-like peptidase T-like protein. This model rep 99.95
TIGR01880400 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase 99.95
PRK07907449 hypothetical protein; Provisional 99.95
PRK08201 456 hypothetical protein; Provisional 99.94
PRK13007352 succinyl-diaminopimelate desuccinylase; Reviewed 99.94
PRK08652347 acetylornithine deacetylase; Provisional 99.94
PRK09104 464 hypothetical protein; Validated 99.93
TIGR01900 373 dapE-gram_pos succinyl-diaminopimelate desuccinyla 99.93
PRK07473376 carboxypeptidase; Provisional 99.93
COG0624409 ArgE Acetylornithine deacetylase/Succinyl-diaminop 99.93
PRK06446 436 hypothetical protein; Provisional 99.92
TIGR01882410 peptidase-T peptidase T. This model represents a t 99.92
PRK09133 472 hypothetical protein; Provisional 99.92
PRK05469408 peptidase T; Provisional 99.92
PRK08262 486 hypothetical protein; Provisional 99.91
PRK07079 469 hypothetical protein; Provisional 99.91
PRK07205 444 hypothetical protein; Provisional 99.9
PRK07906 426 hypothetical protein; Provisional 99.9
PRK00466346 acetyl-lysine deacetylase; Validated 99.9
PRK13381404 peptidase T; Provisional 99.9
PRK04443348 acetyl-lysine deacetylase; Provisional 99.9
TIGR01893 477 aa-his-dipept aminoacyl-histidine dipeptidase. 99.89
PRK12892412 allantoate amidohydrolase; Reviewed 99.89
TIGR01902336 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine d 99.88
PRK07318 466 dipeptidase PepV; Reviewed 99.88
PRK12893412 allantoate amidohydrolase; Reviewed 99.87
PRK08737 364 acetylornithine deacetylase; Provisional 99.87
PRK09290413 allantoate amidohydrolase; Reviewed 99.87
PRK12891414 allantoate amidohydrolase; Reviewed 99.86
PRK08554 438 peptidase; Reviewed 99.86
PRK12890414 allantoate amidohydrolase; Reviewed 99.86
TIGR01886 466 dipeptidase dipeptidase PepV. This model represent 99.85
PRK06156 520 hypothetical protein; Provisional 99.84
PRK13590591 putative bifunctional OHCU decarboxylase/allantoat 99.82
TIGR01879401 hydantase amidase, hydantoinase/carbamoylase famil 99.82
PRK13799591 unknown domain/N-carbamoyl-L-amino acid hydrolase 99.82
TIGR03176406 AllC allantoate amidohydrolase. This enzyme cataly 99.81
PRK15026 485 aminoacyl-histidine dipeptidase; Provisional 99.8
KOG2276 473 consensus Metalloexopeptidases [Amino acid transpo 99.69
KOG2275 420 consensus Aminoacylase ACY1 and related metalloexo 99.66
TIGR01887 447 dipeptidaselike dipeptidase, putative. This model 99.62
PRK10199346 alkaline phosphatase isozyme conversion aminopepti 99.16
COG2195414 PepD Di- and tripeptidases [Amino acid transport a 99.07
TIGR03106 343 trio_M42_hydro hydrolase, peptidase M42 family. Th 99.06
PRK09961 344 exoaminopeptidase; Provisional 99.06
TIGR03107 350 glu_aminopep glutamyl aminopeptidase. This model r 98.86
COG1363 355 FrvX Cellulase M and related proteins [Carbohydrat 98.8
PRK09864 356 putative peptidase; Provisional 98.76
PF01546189 Peptidase_M20: Peptidase family M20/M25/M40 This f 98.71
COG4187 553 RocB Arginine degradation protein (predicted deacy 98.24
PF07687111 M20_dimer: Peptidase dimerisation domain This fami 97.96
KOG2194 834 consensus Aminopeptidases of the M20 family [Postt 97.0
TIGR01893477 aa-his-dipept aminoacyl-histidine dipeptidase. 95.72
PRK15026485 aminoacyl-histidine dipeptidase; Provisional 95.51
KOG3946338 consensus Glutaminyl cyclase [Posttranslational mo 94.95
cd00433468 Peptidase_M17 Cytosol aminopeptidase family, N-ter 94.43
PRK05015424 aminopeptidase B; Provisional 93.72
TIGR01887447 dipeptidaselike dipeptidase, putative. This model 93.41
PTZ00412 569 leucyl aminopeptidase; Provisional 93.39
PF04389179 Peptidase_M28: Peptidase family M28; InterPro: IPR 93.06
PRK00913483 multifunctional aminopeptidase A; Provisional 92.79
PF05343 292 Peptidase_M42: M42 glutamyl aminopeptidase; InterP 91.24
KOG2526 555 consensus Predicted aminopeptidases - M20/M25/M40 86.34
KOG2597513 consensus Predicted aminopeptidase of the M17 fami 85.98
COG0260485 PepB Leucyl aminopeptidase [Amino acid transport a 82.78
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=3.9e-46  Score=314.28  Aligned_cols=200  Identities=41%  Similarity=0.549  Sum_probs=182.9

Q ss_pred             HHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCC-CceEEEEecCC-CCcEEEEEeeCCCC
Q 045912           12 QILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLV-KTGIVAKIGSG-SHPFIALRADMDAL   89 (218)
Q Consensus        12 ~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~-~~~via~~~~~-~~~~i~~~~h~D~v   89 (218)
                      ++.+++ ...+++++++|+||++||++++|++|++||+++|+++||++....+ +|+|+|+|+++ +||+|+||++||+|
T Consensus         3 ~~~~~~-~~~~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DAL   81 (392)
T COG1473           3 KILDEI-ELKDELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDAL   81 (392)
T ss_pred             hHHHHH-hhhHHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccC
Confidence            355556 8889999999999999999999999999999999999999444333 79999999765 46799999999999


Q ss_pred             CccccCCCCccccCCCcccccCCcHHHHHHHHHHHHHHhhcccCC-----------------------------------
Q 045912           90 PLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLN-----------------------------------  134 (218)
Q Consensus        90 p~~~~~~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~~~~~-----------------------------------  134 (218)
                      |+.|.++.||+|+.+|+||+||||+|+|++|++|++|++....++                                   
T Consensus        82 Pi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g  161 (392)
T COG1473          82 PIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFG  161 (392)
T ss_pred             ccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEE
Confidence            999999999999999999999999999999999999998754433                                   


Q ss_pred             --------------------------------------------------------------------------------
Q 045912          135 --------------------------------------------------------------------------------  134 (218)
Q Consensus       135 --------------------------------------------------------------------------------  134 (218)
                                                                                                      
T Consensus       162 ~H~~p~~~~g~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~a  241 (392)
T COG1473         162 LHPGPGLPVGTVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEA  241 (392)
T ss_pred             ecCCCCCCCceEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecC
Confidence                                                                                            


Q ss_pred             --CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcccCCHHHHHHHHHHHHhhc
Q 045912          135 --AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLL  212 (218)
Q Consensus       135 --~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~~  212 (218)
                        +.|||||++++.+++|+++.+..+.+.++|+++++++|..+|+++++++    ...+|++.||+.+++.+++++++..
T Consensus       242 G~a~NVIpd~A~l~gtvR~~~~~~~~~~~~~i~~ia~g~a~~~g~~~ei~~----~~~~p~~~Nd~~~~~~~~~~~~~~~  317 (392)
T COG1473         242 GTAANVIPDSAELEGTIRTFSDEVREKLEARIERIAKGIAAAYGAEAEIDY----ERGYPPVVNDPALTDLLAEAAEEVG  317 (392)
T ss_pred             CCcCCcCCCeeEEEEEeecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEe----cCCCCCccCCHHHHHHHHHHHHHhc
Confidence              5799999999999999999999999999999999999999999999999    8899999999999999999999988


Q ss_pred             CCCC
Q 045912          213 GPEN  216 (218)
Q Consensus       213 G~~~  216 (218)
                      |++.
T Consensus       318 ~~~~  321 (392)
T COG1473         318 GEEV  321 (392)
T ss_pred             cccc
Confidence            7654

>PLN02693 IAA-amino acid hydrolase Back     alignment and domain information
>PLN02280 IAA-amino acid hydrolase Back     alignment and domain information
>PRK06915 acetylornithine deacetylase; Validated Back     alignment and domain information
>TIGR01891 amidohydrolases amidohydrolase Back     alignment and domain information
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK06837 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase Back     alignment and domain information
>TIGR03320 ygeY M20/DapE family protein YgeY Back     alignment and domain information
>PRK07522 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK13004 peptidase; Reviewed Back     alignment and domain information
>PRK06133 glutamate carboxypeptidase; Reviewed Back     alignment and domain information
>PRK07338 hypothetical protein; Provisional Back     alignment and domain information
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK05111 acetylornithine deacetylase; Provisional Back     alignment and domain information
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade Back     alignment and domain information
>PRK13983 diaminopimelate aminotransferase; Provisional Back     alignment and domain information
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK08596 acetylornithine deacetylase; Validated Back     alignment and domain information
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE) Back     alignment and domain information
>TIGR01883 PepT-like peptidase T-like protein Back     alignment and domain information
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase Back     alignment and domain information
>PRK07907 hypothetical protein; Provisional Back     alignment and domain information
>PRK08201 hypothetical protein; Provisional Back     alignment and domain information
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed Back     alignment and domain information
>PRK08652 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09104 hypothetical protein; Validated Back     alignment and domain information
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase Back     alignment and domain information
>PRK07473 carboxypeptidase; Provisional Back     alignment and domain information
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06446 hypothetical protein; Provisional Back     alignment and domain information
>TIGR01882 peptidase-T peptidase T Back     alignment and domain information
>PRK09133 hypothetical protein; Provisional Back     alignment and domain information
>PRK05469 peptidase T; Provisional Back     alignment and domain information
>PRK08262 hypothetical protein; Provisional Back     alignment and domain information
>PRK07079 hypothetical protein; Provisional Back     alignment and domain information
>PRK07205 hypothetical protein; Provisional Back     alignment and domain information
>PRK07906 hypothetical protein; Provisional Back     alignment and domain information
>PRK00466 acetyl-lysine deacetylase; Validated Back     alignment and domain information
>PRK13381 peptidase T; Provisional Back     alignment and domain information
>PRK04443 acetyl-lysine deacetylase; Provisional Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK12892 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase Back     alignment and domain information
>PRK07318 dipeptidase PepV; Reviewed Back     alignment and domain information
>PRK12893 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK08737 acetylornithine deacetylase; Provisional Back     alignment and domain information
>PRK09290 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK12891 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>PRK08554 peptidase; Reviewed Back     alignment and domain information
>PRK12890 allantoate amidohydrolase; Reviewed Back     alignment and domain information
>TIGR01886 dipeptidase dipeptidase PepV Back     alignment and domain information
>PRK06156 hypothetical protein; Provisional Back     alignment and domain information
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional Back     alignment and domain information
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family Back     alignment and domain information
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional Back     alignment and domain information
>TIGR03176 AllC allantoate amidohydrolase Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional Back     alignment and domain information
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family Back     alignment and domain information
>PRK09961 exoaminopeptidase; Provisional Back     alignment and domain information
>TIGR03107 glu_aminopep glutamyl aminopeptidase Back     alignment and domain information
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09864 putative peptidase; Provisional Back     alignment and domain information
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism] Back     alignment and domain information
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 [] Back     alignment and domain information
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only] Back     alignment and domain information
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase Back     alignment and domain information
>PRK15026 aminoacyl-histidine dipeptidase; Provisional Back     alignment and domain information
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains Back     alignment and domain information
>PRK05015 aminopeptidase B; Provisional Back     alignment and domain information
>TIGR01887 dipeptidaselike dipeptidase, putative Back     alignment and domain information
>PTZ00412 leucyl aminopeptidase; Provisional Back     alignment and domain information
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK00913 multifunctional aminopeptidase A; Provisional Back     alignment and domain information
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only] Back     alignment and domain information
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query218
1xmb_A 418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-38
1xmb_A418 X-ray Structure Of Iaa-aminoacid Hydrolase From Ara 1e-10
1ysj_A 404 Crystal Structure Of Bacillus Subtilis Yxep Protein 3e-21
4ewt_A 392 The Crystal Structure Of A Putative Aminohydrolase 2e-13
3io1_A 445 Crystal Structure Of Aminobenzoyl-Glutamate Utiliza 9e-06
3ram_A 394 Crystal Structure Of Hmra Length = 394 7e-04
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure 
Iteration: 1

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 70/118 (59%), Positives = 87/118 (73%)
Query: 22  NWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIA 81
           +W++ IRR+IHENPEL +E   T+ LIRSEL+ +GI Y  P+  TG++  IG+G  PF+A
Sbjct: 28  DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVA 87
Query: 82  LRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVI 139
           LRADMDALP+QE V WEHKSKI GKMHACGHD   TMLLG AK+LH  +  L    V+
Sbjct: 88  LRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVL 145
>pdb|1XMB|A Chain A, X-ray Structure Of Iaa-aminoacid Hydrolase From Arabidopsis Thaliana Gene At5g56660 Length = 418 Back     alignment and structure
>pdb|1YSJ|A Chain A, Crystal Structure Of Bacillus Subtilis Yxep Protein (Apc1829), A Dinuclear Metal Binding Peptidase From M20 Family Length = 404 Back     alignment and structure
>pdb|4EWT|A Chain A, The Crystal Structure Of A Putative Aminohydrolase From Methicillin Resistant Staphylococcus Aureus Length = 392 Back     alignment and structure
>pdb|3IO1|A Chain A, Crystal Structure Of Aminobenzoyl-Glutamate Utilization Protein From Klebsiella Pneumoniae Length = 445 Back     alignment and structure
>pdb|3RAM|A Chain A, Crystal Structure Of Hmra Length = 394 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query218
1xmb_A 418 IAA-amino acid hydrolase homolog 2; structural gen 3e-61
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 3e-16
1ysj_A 404 Protein YXEP; M20 family peptidase, dinuclear meta 2e-53
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 3e-08
3io1_A 445 Aminobenzoyl-glutamate utilization protein; peptid 9e-37
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 1e-09
3ram_A 394 HMRA protein; two-domain, catalytic (alpha-beta-al 4e-15
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
 Score =  196 bits (500), Expect = 3e-61
 Identities = 69/119 (57%), Positives = 87/119 (73%)

Query: 16  ETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG 75
           ++    +W++ IRR+IHENPEL +E   T+ LIRSEL+ +GI Y  P+  TG++  IG+G
Sbjct: 22  KSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTG 81

Query: 76  SHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLN 134
             PF+ALRADMDALP+QE V WEHKSKI GKMHACGHD   TMLLG AK+LH  +  L 
Sbjct: 82  EPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQ 140
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Length = 418 Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Length = 404 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Length = 445 Back     alignment and structure
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Length = 394 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query218
3io1_A445 Aminobenzoyl-glutamate utilization protein; peptid 100.0
3ram_A394 HMRA protein; two-domain, catalytic (alpha-beta-al 100.0
1xmb_A418 IAA-amino acid hydrolase homolog 2; structural gen 100.0
1ysj_A404 Protein YXEP; M20 family peptidase, dinuclear meta 100.0
3pfo_A433 Putative acetylornithine deacetylase; metal bindin 100.0
3dlj_A485 Beta-Ala-His dipeptidase; CNDP1, carnosine dipepti 100.0
3pfe_A472 Succinyl-diaminopimelate desuccinylase; metal bind 100.0
3isz_A377 Succinyl-diaminopimelate desuccinylase; DAPE, Zn-b 99.97
3rza_A396 Tripeptidase; phosphorylase/hydrolase-like, struct 99.97
3gb0_A373 Peptidase T; NP_980509.1, aminopeptidase PEPT, pep 99.97
1cg2_A393 Carboxypeptidase G2; metallocarboxypeptidase, hydr 99.97
1vgy_A393 Succinyl-diaminopimelate desuccinylase; structural 99.97
2zog_A479 Cytosolic non-specific dipeptidase; metallopeptida 99.97
3ct9_A356 Acetylornithine deacetylase; NP_812461.1, A putati 99.97
3tx8_A369 Succinyl-diaminopimelate desuccinylase; peptidase, 99.96
2pok_A481 Peptidase, M20/M25/M40 family; M20 family peptidas 99.96
2f7v_A369 Aectylcitrulline deacetylase; alpha/beta, hydrolas 99.95
3ife_A434 Peptidase T; metallopeptidase, aminopeptidase, hyd 99.94
1lfw_A 470 PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bac 99.94
3khx_A 492 Putative dipeptidase sacol1801; DAPE, metallopepti 99.93
2rb7_A364 Peptidase, M20/M25/M40 family; YP_387682.1, CO-cat 99.93
2qyv_A 487 XAA-His dipeptidase; YP_718209.1, structural genom 99.93
1fno_A417 Peptidase T; metallo peptidase, protease, hydrolas 99.92
3mru_A 490 Aminoacyl-histidine dipeptidase; metalloprotease, 99.92
1z2l_A423 Allantoate amidohydrolase; ALLC, purine cataboli a 99.9
3n5f_A408 L-carbamoylase, N-carbamoyl-L-amino acid hydrolase 99.9
4h2k_A269 Succinyl-diaminopimelate desuccinylase; DAPE, MCSG 99.89
3t68_A268 Succinyl-diaminopimelate desuccinylase; DAPE, csgi 99.87
2v8h_A474 Beta-alanine synthase; amidohydrolase, alpha and b 99.86
1q7l_A198 Aminoacylase-1; catalysis, enzyme dimerization, si 99.86
2gre_A 349 Deblocking aminopeptidase; structural genomi prote 99.56
1vho_A 346 Endoglucanase; structural genomics, unknown functi 99.53
1vhe_A 373 Aminopeptidase/glucanase homolog; structural genom 99.47
2wyr_A 332 Cobalt-activated peptidase TET1; hydrolase, large 99.46
1tkj_A284 Aminopeptidase, SGAP; double-zinc metalloproteinas 99.46
2fvg_A 340 Endoglucanase; TM1049, structural genomics, joint 99.45
1ylo_A 348 Hypothetical protein SF2450; structural genomics, 99.44
2wzn_A 354 TET3, 354AA long hypothetical operon protein FRV; 99.43
1y0y_A 353 FRV operon protein FRVX; aminopeptidase, PDZ, hydr 99.32
3cpx_A 321 Aminopeptidase, M42 family; YP_676701.1, putative 99.29
1rtq_A299 Bacterial leucyl aminopeptidase; bimetallic, zinc, 99.26
3tc8_A309 Leucine aminopeptidase; phosphorylase/hydrolase-li 99.24
3gux_A314 Putative Zn-dependent exopeptidase; aminopeptidase 99.22
3kl9_A 355 PEPA, glutamyl aminopeptidase; tetrahedral aminope 99.19
2vpu_A 354 TET3, 354AA long hypothetical operon protein FRV; 99.08
2afw_A329 Glutaminyl-peptide cyclotransferase; alpha-beta pr 99.06
3isx_A 343 Endoglucanase; TM1050, structural genomics, joint 99.0
4fuu_A309 Leucine aminopeptidase; phosphorylase/hydrolase li 98.89
4fai_A330 CG5976, isoform B; alpha/beta hydrolase, PGlu form 98.68
4f9u_A 312 CG32412; alpha/beta hydrolase, PGlu formation, PE, 98.64
3pb6_X330 Glutaminyl-peptide cyclotransferase-like protein; 98.61
2ek8_A421 Aminopeptidase; metalloproteinase, hydrolase; 1.80 97.3
3iib_A444 Peptidase M28; YP_926796.1, structural genomics, J 96.91
3fed_A 707 Glutamate carboxypeptidase III; metallopeptidase, 95.37
3kas_A 640 Transferrin receptor protein 1; transferrin recept 95.14
1y7e_A 458 Probable M18-family aminopeptidase 1; aminopeptida 92.1
2ijz_A 428 Probable M18-family aminopeptidase 2; putative ami 90.87
2glf_A 450 Probable M18-family aminopeptidase 1; putative, NY 90.37
1lam_A484 Leucine aminopeptidase; exopeptidase, metallopepti 84.44
2hc9_A491 Leucine aminopeptidase 1; carbonate, structural ge 84.1
1gyt_A503 Cytosol aminopeptidase; hydrolase, DNA recombinati 82.16
2glj_A 461 Probable M18-family aminopeptidase 1; aminopeptida 81.28
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp} Back     alignment and structure
Probab=100.00  E-value=1.1e-41  Score=294.68  Aligned_cols=204  Identities=25%  Similarity=0.285  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC-------------------------
Q 045912            9 FADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL-------------------------   63 (218)
Q Consensus         9 ~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~-------------------------   63 (218)
                      |+.+|.++++++++++++++++||++||++++|.+|++||+++|+++||++++..                         
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (445)
T 3io1_A            1 MSLQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR   80 (445)
T ss_dssp             --CCHHHHHHTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence            3456889999999999999999999999999999999999999999999987632                         


Q ss_pred             --------------CCceEEEEecCC-CCcEEEEEeeCCCCCccccC---CCCcc----ccCCCcccccCCcHHHHHHHH
Q 045912           64 --------------VKTGIVAKIGSG-SHPFIALRADMDALPLQELV---NWEHK----SKIDGKMHACGHDAPTTMLLG  121 (218)
Q Consensus        64 --------------~~~~via~~~~~-~~~~i~~~~h~D~vp~~~~~---~~pf~----~~~~g~~~~~G~d~~~a~ll~  121 (218)
                                    +++||+|+++++ ++|+|+|+|||||||+++.+   .+||.    +..+|++||||||+|+|++|+
T Consensus        81 ~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~  160 (445)
T 3io1_A           81 EQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG  160 (445)
T ss_dssp             TTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred             cccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence                          579999999764 47999999999999987644   45654    556899999999999999999


Q ss_pred             HHHHHHhhcccCC-------------------------------------------------------------------
Q 045912          122 EAKLLHRRKDQLN-------------------------------------------------------------------  134 (218)
Q Consensus       122 aa~~L~~~~~~~~-------------------------------------------------------------------  134 (218)
                      +++.|++.+..++                                                                   
T Consensus       161 aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v~Gk~  240 (445)
T 3io1_A          161 LAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQFSGVA  240 (445)
T ss_dssp             HHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEEECCC
T ss_pred             HHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEEEeec
Confidence            9999987654332                                                                   


Q ss_pred             ----------------------------------------------CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHH
Q 045912          135 ----------------------------------------------AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVV  168 (218)
Q Consensus       135 ----------------------------------------------~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~  168 (218)
                                                                    +.||||++|++.+|+|+.+.+..+.+.++|++++
T Consensus       241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~  320 (445)
T 3io1_A          241 AHAGGKPEDGRNALLAAAQAALGLHAIPPHSAGASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVV  320 (445)
T ss_dssp             SSTTCCGGGCCCHHHHHHHHHHHHHTCCCBTTBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcCCcCHHHHHHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence                                                          7899999999999999999999999999999999


Q ss_pred             HHHHHHhCCeEEEEeeecccCCCCcccCCHHHHHHHHHHHHhhcCCCC
Q 045912          169 KQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPEN  216 (218)
Q Consensus       169 ~~~a~~~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~~G~~~  216 (218)
                      ++++..+++++++++    ...+|++.+|+++++.+++++++++|.+.
T Consensus       321 ~~~a~~~g~~~~i~~----~~~~~~~~~d~~l~~~~~~a~~~~~g~~~  364 (445)
T 3io1_A          321 AGAAAMYEARYELRM----MGAATASAPSPAWVDYLREQAARVPGVQQ  364 (445)
T ss_dssp             HHHHHHTTCEEEEEE----EEEECCCCCCHHHHHHHHHHHHHSTTCCB
T ss_pred             HHHHHHhCCeEEEEE----ecCCCCcCCCHHHHHHHHHHHHHhcCCcc
Confidence            999999999999998    66788999999999999999998877653
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus} Back     alignment and structure
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A Back     alignment and structure
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris} Back     alignment and structure
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens} Back     alignment and structure
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp} Back     alignment and structure
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A Back     alignment and structure
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp} Back     alignment and structure
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987} Back     alignment and structure
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A* Back     alignment and structure
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum} Back     alignment and structure
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae} Back     alignment and structure
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A Back     alignment and structure
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis} Back     alignment and structure
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1 Back     alignment and structure
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A Back     alignment and structure
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT} Back     alignment and structure
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A Back     alignment and structure
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus} Back     alignment and structure
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A Back     alignment and structure
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus} Back     alignment and structure
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae} Back     alignment and structure
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A Back     alignment and structure
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A Back     alignment and structure
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4 Back     alignment and structure
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A Back     alignment and structure
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A Back     alignment and structure
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A Back     alignment and structure
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A Back     alignment and structure
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ... Back     alignment and structure
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis} Back     alignment and structure
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae} Back     alignment and structure
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ... Back     alignment and structure
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima} Back     alignment and structure
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron} Back     alignment and structure
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A* Back     alignment and structure
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A* Back     alignment and structure
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X* Back     alignment and structure
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A* Back     alignment and structure
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B} Back     alignment and structure
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ... Back     alignment and structure
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A Back     alignment and structure
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4 Back     alignment and structure
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa} Back     alignment and structure
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima} Back     alignment and structure
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A* Back     alignment and structure
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A Back     alignment and structure
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1 Back     alignment and structure
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 218
d1xmba1273 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydro 5e-27
d1ysja1261 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillu 2e-24
d1xmba2119 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mo 2e-06
d2grea2233 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptid 3e-05
d1ysja2115 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subti 0.002
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 273 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  102 bits (254), Expect = 5e-27
 Identities = 76/144 (52%), Positives = 96/144 (66%), Gaps = 8/144 (5%)

Query: 5   LDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLV 64
           L+ A + ++        +W++ IRR+IHENPEL +E   T+ LIRSEL+ +GI Y  P+ 
Sbjct: 3   LEFAKSPEVF-------DWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVA 55

Query: 65  KTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAK 124
            TG++  IG+G  PF+ALRADMDALP+QE V WEHKSKI GKMHACGHD   TMLLG AK
Sbjct: 56  ITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAK 115

Query: 125 LLHRRKDQLNAADV-ISPRAEFGG 147
           +LH  +  L    V I   AE G 
Sbjct: 116 ILHEHRHHLQGTVVLIFQPAEEGL 139
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 261 Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119 Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Length = 233 Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Length = 115 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query218
d1xmba1273 IAA-amino acid hydrolase, catalytic domain {Mouse- 99.98
d1ysja1261 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.97
d1vgya1262 Succinyl-diaminopimelate desuccinylase, catalytic 99.87
d1cg2a1276 Carboxypeptidase G2, catalytic domain {Pseudomonas 99.85
g1q7l.1280 Aminoacylase-1, catalytic domain {Human (Homo sapi 99.83
d1lfwa1272 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 99.79
d2grea2233 Deblocking aminopeptidase YhfE {Bacillus cereus [T 99.65
d1vhea2275 Hypothetical protein YsdC, catalytic domain {Bacil 99.63
d1yloa2264 Aminopeptidase YpdE {Shigella flexneri [TaxId: 623 99.62
d1vhoa2248 Putative endoglucanase TM1048, catalytic domain {T 99.53
d2fvga2255 Endoglucanase TM1049 {Thermotoga maritima [TaxId: 99.45
d1fnoa4295 Peptidase T (tripeptidase), catalytic domain {Salm 99.3
d1ysja2115 Protein YxeP {Bacillus subtilis [TaxId: 1423]} 99.17
d1z2la2117 Allantoate amidohydrolase AllC {Escherichia coli [ 99.12
d1tkja1277 Aminopeptidase {Streptomyces griseus [TaxId: 1911] 98.92
d1xmba2119 IAA-amino acid hydrolase {Mouse-ear cress (Arabido 98.9
d1cg2a2113 Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 98.79
d1r3na2116 Peptidase-like beta-alanine synthase {Yeast (Sacch 98.76
d1z2la1293 Allantoate amidohydrolase AllC catalytic domain {E 98.71
d1y0ya2255 Frv operon protein FrvX, catalytic domain {Pyrococ 98.67
d2afwa1329 Glutaminyl-peptide cyclotransferase, QPCT {Human ( 98.59
d1r3na1 322 Peptidase-like beta-alanine synthase, catalytic do 98.58
d3bi1a3304 Glutamate carboxypeptidase II FOLH1 {Human (Homo s 98.56
d1rtqa_291 Aminopeptidase {Aeromonas proteolytica [TaxId: 671 98.5
d1vgya2113 Succinyl-diaminopimelate desuccinylase {Neisseria 98.37
d1de4c3294 Transferrin receptor ectodomain, protease-like dom 98.03
d1lfwa2196 Aminopeptidase PepV {Lactobacillus delbrueckii [Ta 95.39
d1lama1325 Leucine aminopeptidase, C-terminal domain {Cow (Bo 87.32
d1gyta2325 Leucine aminopeptidase, C-terminal domain {Escheri 80.86
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Bacterial dinuclear zinc exopeptidases
domain: IAA-amino acid hydrolase, catalytic domain
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.98  E-value=5.6e-33  Score=222.64  Aligned_cols=188  Identities=43%  Similarity=0.707  Sum_probs=111.9

Q ss_pred             HHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCCccccC
Q 045912           16 ETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELV   95 (218)
Q Consensus        16 ~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp~~~~~   95 (218)
                      ..++..+++++++|+||++||++++|.+|++||+++|+++||++++..++|+|+|.++++++|+|+||||||+||+.+.+
T Consensus         7 ~~~e~~~~li~~rr~lh~~PEl~~~E~~T~~~i~~~L~~~g~~~~~~~~~tg~~a~~~~~~~~~i~~rad~Dalp~~e~~   86 (273)
T d1xmba1           7 KSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGV   86 (273)
T ss_dssp             ---------------HHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEECCCBSCCCCC
T ss_pred             hChHHHHHHHHHHHHHHhCcCcCCcHHHHHHHHHHHHHHCCCeEEecCCceEEEEEECCCcceEEEEecccccccccccc
Confidence            45567789999999999999999999999999999999999999877678999999988778999999999999999999


Q ss_pred             CCCccccCCCcccccCCcHHHHHHHHHHHHHHhhcccCCCCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHh
Q 045912           96 NWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVH  175 (218)
Q Consensus        96 ~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~~~~~~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~  175 (218)
                      .+||+|..+|+||+||||+|+|++|++++.|++.+..      +++.+.|.+.   +.+|...-...    +++.-+ -.
T Consensus        87 ~~~~~s~~~g~~HaCGHd~h~a~~l~aa~~l~~~~~~------~~g~v~~ifq---PaEE~~~Ga~~----mi~~G~-~~  152 (273)
T d1xmba1          87 EWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHH------LQGTVVLIFQ---PAEEGLSGAKK----MREEGA-LK  152 (273)
T ss_dssp             CSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGG------CSSEEEEEEE---CCTTTTCHHHH----HHHTTT-TT
T ss_pred             CcccccCCCCcccccccchHHHHHHHHHHHHHHhhhc------CCCeEEEEEe---cccccccchhH----HHHcCC-cC
Confidence            9999999999999999999999999999999987643      4455555431   22333222222    221100 01


Q ss_pred             CCeEEE--Eee-----ec--ccCCCCcccCCHHHHHHHHHHHHhhcCCCCC
Q 045912          176 RCNAYV--DFQ-----VE--EFPLIPAALDNDSLYLLVERVGKSLLGPENV  217 (218)
Q Consensus       176 g~~~~i--~~~-----~~--~~~~~p~~~~d~~l~~~l~~~~~~~~G~~~~  217 (218)
                      ++.+-+  ...     |.  .........+|+.+++.+.+++...+|.+++
T Consensus       153 ~vd~~~~~H~~~~~~~G~i~~~~G~~ma~nd~~~~~~~~~~a~~~~G~~av  203 (273)
T d1xmba1         153 NVEAIFGIHLSARIPFGKAASRAGSFLTVNNKDLYKQFKKVVRDLLGQEAF  203 (273)
T ss_dssp             TEEEEEEEEEEEEEETTCEEECSEEEEE------------------ECGGE
T ss_pred             CCCeeEEEeecCCCCcchhhcccchhhhhhhhHhHHHHHHHHHHHhccccc
Confidence            222211  110     00  0122233467888888888888888887653
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ysja2 d.58.19.1 (A:178-292) Protein YxeP {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]} Back     information, alignment and structure
>d1xmba2 d.58.19.1 (A:216-334) IAA-amino acid hydrolase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1cg2a2 d.58.19.1 (A:214-326) Carboxypeptidase G2 {Pseudomonas sp., strain rs-16 [TaxId: 306]} Back     information, alignment and structure
>d1r3na2 d.58.19.1 (A:248-363) Peptidase-like beta-alanine synthase {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Back     information, alignment and structure
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]} Back     information, alignment and structure
>d1vgya2 d.58.19.1 (A:181-293) Succinyl-diaminopimelate desuccinylase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1lfwa2 d.58.19.1 (A:187-382) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]} Back     information, alignment and structure
>d1lama1 c.56.5.3 (A:160-484) Leucine aminopeptidase, C-terminal domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1gyta2 c.56.5.3 (A:179-503) Leucine aminopeptidase, C-terminal domain {Escherichia coli, PepA [TaxId: 562]} Back     information, alignment and structure