Citrus Sinensis ID: 045999

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------44
MVSPELSHQYSPMAKPHVRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRFDSTPLSEAKATSEARSPGCAANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPWG
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccEEEEEEcccccccccccHHHHHHHHHHcHHHHHHHccccEEEEcccccccccccccHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccEEcccccccccccccEEEccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccc
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcHHcccHccHHHHHHHHHHHHHHHccccEEEEEEcccEEEEcccccccHHHHcccccEEcccccHEEEEcccccccccEEEEEccHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcHHHccccEEEEcccEEccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc
mvspelshqyspmakphvrnkthpcltdgflFLGGAFFALLIVWSFSSllnsaprfdstplseakatsearspgcaanlrydppdetfyddqelSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVtgsqpkpcknpigdhlLLRFFKNKVDYCRIHGydifynnvllnpkmnsfwAKLPVVKAAMlahpeaewiwwvdsdaaftdmefklpleryrnhnvvvhgwPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTwanmgpigadyakwgqiqrstfkdkifpesdDQAALIYLLYTEkdkyydniylegefyfegywleIVPTVRTLRRRHAEKVSESYAAQREQYLKEAgngrgswrrpfithftgcqpcsgdhnqmysgetCWSGMVKALNFADNQVLRkygfvhpdlrdsslvspvpfdfpddgpwg
mvspelshqyspmakphvRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRFDSTPLSeakatsearspgcaANLRYDPPDetfyddqelsySIEKKIEDWDEKRKRWLKLHpsfaagarerVVLVTgsqpkpcknpigdhLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFkdkifpesdDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHpdlrdsslvspvpfdfpddgpwg
MVSPELSHQYSPMAKPHVRNKTHPCLTDgflflggaffallIVWSFSSLLNSAPRFDSTPLSEAKATSEARSPGCAANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPWG
*********************THPCLTDGFLFLGGAFFALLIVWSFSSLLN************************************FYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRH**************YL**AGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLR*******************
*************************LTDGFLFLGGAFFALLIVWSFSSLLN*************************************YDDQELSYSIEKKIEDWDEKRKR***************VVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFP******
**************KPHVRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRF****************PGCAANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLR**********YAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPWG
**********************HPCLTDGFLFLGGAFFALLIVWSFSSLLNS*******************************PDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDD****
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVSPELSHQYSPMAKPHVRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRFDSTPLSEAKATSEARSPGCAANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRTLRRRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPWG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query438 2.2.26 [Sep-21-2011]
O81007449 Putative glycosyltransfer yes no 0.974 0.951 0.638 1e-170
Q9SZG1432 Glycosyltransferase 6 OS= no no 0.945 0.958 0.622 1e-159
Q564G7435 Galactomannan galactosylt N/A no 0.940 0.947 0.589 1e-150
Q9LF80457 Putative glycosyltransfer no no 0.716 0.687 0.466 4e-90
Q9LZJ3460 Xyloglucan 6-xylosyltrans no no 0.744 0.708 0.454 5e-88
Q9CA75457 Putative glycosyltransfer no no 0.716 0.687 0.441 3e-87
Q9M9U0513 Putative glycosyltransfer no no 0.691 0.590 0.441 3e-86
O22775461 Putative glycosyltransfer no no 0.684 0.650 0.466 8e-86
Q09681346 Probable alpha-1,2-galact yes no 0.340 0.430 0.263 3e-08
Q10359332 Alpha-1,2-galactosyltrans no no 0.255 0.337 0.277 1e-07
>sp|O81007|GT7_ARATH Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1 Back     alignment and function desciption
 Score =  599 bits (1544), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 293/459 (63%), Positives = 352/459 (76%), Gaps = 32/459 (6%)

Query: 1   MVSPELS---HQYSPMAKPHVRNKTHP--CLTDGFLFLGGAFFALLIVWSFSSLLNSAPR 55
           MVSPE S   +Q SPMAK +   +T P  C++D  LFLGGAF +L++VWSF S  + +P 
Sbjct: 1   MVSPETSSSHYQSSPMAK-YAGTRTRPVVCISDVVLFLGGAFMSLILVWSFFSFSSISPN 59

Query: 56  FDSTPLSEAKATSEARSPGCAA--NLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWL 113
                       +E  S  C++  ++  DP D  +YDD +L+Y+IEK +++WDEKR+RWL
Sbjct: 60  L--------TVKNEESSNKCSSGIDMSQDPTDPVYYDDPDLTYTIEKPVKNWDEKRRRWL 111

Query: 114 KLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLN 173
            LHPSF  GA  R V+VTGSQ  PCKNPIGDHLLLRFFKNKVDYCRIHG+DIFY+N LL+
Sbjct: 112 NLHPSFIPGAENRTVMVTGSQSAPCKNPIGDHLLLRFFKNKVDYCRIHGHDIFYSNALLH 171

Query: 174 PKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKL 233
           PKMNS+WAKLP VKAAM+AHPEAEWIWWVDSDA FTDM+F  P  RY+ HN+VVHGWP +
Sbjct: 172 PKMNSYWAKLPAVKAAMIAHPEAEWIWWVDSDALFTDMDFTPPWRRYKEHNLVVHGWPGV 231

Query: 234 IYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESD 293
           IY  +SWT+LNAGVFLIRNCQWSM+ +DTW  MGP+  +YAKWGQIQRS FKDK+FPESD
Sbjct: 232 IYNDRSWTALNAGVFLIRNCQWSMELIDTWTGMGPVSPEYAKWGQIQRSIFKDKLFPESD 291

Query: 294 DQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVR--------------TLRRRH 339
           DQ AL+YLLY  ++ YY  IYLEG+FYFEGYWLEIVP +               TLRRRH
Sbjct: 292 DQTALLYLLYKHREVYYPKIYLEGDFYFEGYWLEIVPGLSNVTERYLEMEREDATLRRRH 351

Query: 340 AEKVSESYAAQREQ-YLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVK 398
           AEKVSE YAA RE+ +LK    G+GS RRPF+THFTGCQPCSGDHN+MY G+TCW+GM+K
Sbjct: 352 AEKVSERYAAFREERFLKGERGGKGSKRRPFVTHFTGCQPCSGDHNKMYDGDTCWNGMIK 411

Query: 399 ALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPW 437
           A+NFADNQV+RKYGFVH DL  +S + PVPFD+PD+ PW
Sbjct: 412 AINFADNQVMRKYGFVHSDLGKTSPLQPVPFDYPDE-PW 449

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9SZG1|GT6_ARATH Glycosyltransferase 6 OS=Arabidopsis thaliana GN=GT6 PE=2 SV=1 Back     alignment and function description
>sp|Q564G7|GMGT1_CYATE Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba GN=GMGT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LF80|GT3_ARATH Putative glycosyltransferase 3 OS=Arabidopsis thaliana GN=GT3 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZJ3|XT1_ARATH Xyloglucan 6-xylosyltransferase OS=Arabidopsis thaliana GN=XT1 PE=1 SV=1 Back     alignment and function description
>sp|Q9CA75|GT5_ARATH Putative glycosyltransferase 5 OS=Arabidopsis thaliana GN=GT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9M9U0|GT4_ARATH Putative glycosyltransferase 4 OS=Arabidopsis thaliana GN=GT4 PE=2 SV=1 Back     alignment and function description
>sp|O22775|GT2_ARATH Putative glycosyltransferase 2 OS=Arabidopsis thaliana GN=GT2 PE=2 SV=1 Back     alignment and function description
>sp|Q09681|GMH2_SCHPO Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh2 PE=3 SV=1 Back     alignment and function description
>sp|Q10359|GMH3_SCHPO Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gmh3 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
224127172458 predicted protein [Populus trichocarpa] 0.990 0.947 0.715 0.0
224097244457 predicted protein [Populus trichocarpa] 0.988 0.947 0.702 0.0
255568633446 transferase, putative [Ricinus communis] 0.972 0.955 0.689 1e-179
449448200444 PREDICTED: galactomannan galactosyltrans 0.974 0.961 0.694 1e-179
147858960446 hypothetical protein VITISV_015452 [Viti 0.958 0.941 0.676 1e-178
356541602452 PREDICTED: galactomannan galactosyltrans 0.977 0.946 0.667 1e-174
357482539446 Galactomannan galactosyltransferase [Med 0.974 0.957 0.661 1e-174
62700759449 galactomannan galactosyltransferase [Sen 0.954 0.930 0.657 1e-172
356497003449 PREDICTED: galactomannan galactosyltrans 0.972 0.948 0.642 1e-169
18400116449 putative glycosyltransferase 7 [Arabidop 0.974 0.951 0.638 1e-168
>gi|224127172|ref|XP_002320005.1| predicted protein [Populus trichocarpa] gi|222860778|gb|EEE98320.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/461 (71%), Positives = 369/461 (80%), Gaps = 27/461 (5%)

Query: 1   MVSPELSH---QYSPMAKPHVRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRFD 57
           M++PE+     QYSPMAK  VRNK   C +DGFL+LGGA FA L+VWS  S   + P   
Sbjct: 1   MITPEVPQNKSQYSPMAKSSVRNKPFSCFSDGFLYLGGALFAFLLVWSLWSY--TVPHSF 58

Query: 58  STPLSEAKATSEARSPGC-----AANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRW 112
               S   AT++AR+  C     A NL YDPPD+TFYDDQELSYSIE+ +++WDEKRK W
Sbjct: 59  EPRGSTKSATNDARTQQCVQENPAVNLGYDPPDQTFYDDQELSYSIERPMKNWDEKRKEW 118

Query: 113 LKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLL 172
           LK HPSFA GAR+RVVLVTGSQ KPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLL
Sbjct: 119 LKRHPSFAPGARDRVVLVTGSQSKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLL 178

Query: 173 NPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLER--YRNHNVVVHGW 230
           +PKM+S+WAKLPVVKAAMLAHPEAEWIWWVDSDA FTDME+KLPL R  YRNHN+VVHGW
Sbjct: 179 HPKMSSYWAKLPVVKAAMLAHPEAEWIWWVDSDAMFTDMEYKLPLRRYDYRNHNLVVHGW 238

Query: 231 PKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFP 290
            KLIY+ KSWT+LNAGVFLIRNCQWSMDFM+ W+ MGP  ++Y KWG IQRS FKDK+FP
Sbjct: 239 EKLIYKEKSWTALNAGVFLIRNCQWSMDFMEKWSGMGPTSSEYKKWGPIQRSVFKDKLFP 298

Query: 291 ESDDQAALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPTVRT--------------LR 336
           ESDDQ+ LIY+LY +K    D IYLEGE+YFEGYW +IVPT                 LR
Sbjct: 299 ESDDQSGLIYMLYQDKG-LMDKIYLEGEYYFEGYWADIVPTYDNITEKYTELEKEDGKLR 357

Query: 337 RRHAEKVSESYAAQREQYLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGM 396
           RRHAEKVSE Y   RE +LKEAGNG+GSWRRPFITHFTGCQPCSGDHNQ+Y GETCW+GM
Sbjct: 358 RRHAEKVSEQYGVFREPHLKEAGNGKGSWRRPFITHFTGCQPCSGDHNQIYHGETCWNGM 417

Query: 397 VKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPW 437
           VKALNFADNQVLRKYGFVHPDL DS  V+  PFD+PDDGPW
Sbjct: 418 VKALNFADNQVLRKYGFVHPDLLDSGTVTETPFDYPDDGPW 458

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224097244|ref|XP_002310890.1| predicted protein [Populus trichocarpa] gi|222853793|gb|EEE91340.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255568633|ref|XP_002525290.1| transferase, putative [Ricinus communis] gi|223535448|gb|EEF37118.1| transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449448200|ref|XP_004141854.1| PREDICTED: galactomannan galactosyltransferase 1-like [Cucumis sativus] gi|449521315|ref|XP_004167675.1| PREDICTED: galactomannan galactosyltransferase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147858960|emb|CAN80825.1| hypothetical protein VITISV_015452 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356541602|ref|XP_003539263.1| PREDICTED: galactomannan galactosyltransferase 1-like isoform 1 [Glycine max] gi|356541604|ref|XP_003539264.1| PREDICTED: galactomannan galactosyltransferase 1-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|357482539|ref|XP_003611556.1| Galactomannan galactosyltransferase [Medicago truncatula] gi|355512891|gb|AES94514.1| Galactomannan galactosyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|62700759|emb|CAI79403.1| galactomannan galactosyltransferase [Senna occidentalis] Back     alignment and taxonomy information
>gi|356497003|ref|XP_003517354.1| PREDICTED: galactomannan galactosyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|18400116|ref|NP_565544.1| putative glycosyltransferase 7 [Arabidopsis thaliana] gi|46576210|sp|O81007.1|GT7_ARATH RecName: Full=Putative glycosyltransferase 7; Short=AtGT7 gi|3445207|gb|AAC32437.1| Expressed protein [Arabidopsis thaliana] gi|9716846|emb|CAC01675.1| putative golgi glycosyltransferase [Arabidopsis thaliana] gi|14334702|gb|AAK59529.1| unknown protein [Arabidopsis thaliana] gi|16323414|gb|AAL15201.1| unknown protein [Arabidopsis thaliana] gi|330252276|gb|AEC07370.1| putative glycosyltransferase 7 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query438
TAIR|locus:2059155449 AT2G22900 [Arabidopsis thalian 0.979 0.955 0.632 5.3e-159
TAIR|locus:2120145432 AT4G37690 [Arabidopsis thalian 0.947 0.960 0.606 5e-147
TAIR|locus:2160369457 XXT3 "xyloglucan xylosyltransf 0.584 0.560 0.476 4.4e-88
TAIR|locus:2081625460 XT1 "xylosyltransferase 1" [Ar 0.582 0.554 0.5 5e-87
TAIR|locus:2019090457 XXT5 "xyloglucan xylosyltransf 0.630 0.603 0.450 1.2e-85
TAIR|locus:2132293461 XT2 "UDP-xylosyltransferase 2" 0.536 0.509 0.512 1e-84
TAIR|locus:2035030513 XXT4 "xyloglucan xylosyltransf 0.536 0.458 0.481 4.5e-84
TAIR|locus:2121798120 AT4G38310 [Arabidopsis thalian 0.264 0.966 0.717 1.9e-44
POMBASE|SPBC1289.13c375 SPBC1289.13c "alpha-1,2-galact 0.200 0.234 0.312 3e-08
POMBASE|SPAC5H10.13c346 gmh2 "alpha-1,2-galactosyltran 0.207 0.263 0.333 4.3e-08
TAIR|locus:2059155 AT2G22900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1549 (550.3 bits), Expect = 5.3e-159, P = 5.3e-159
 Identities = 289/457 (63%), Positives = 344/457 (75%)

Query:     1 MVSPELS---HQYSPMAKPHVRNKTHP--CLTDXXXXXXXXXXXXXIVWSFSSLLNSAPR 55
             MVSPE S   +Q SPMAK +   +T P  C++D             +VWSF S  + +P 
Sbjct:     1 MVSPETSSSHYQSSPMAK-YAGTRTRPVVCISDVVLFLGGAFMSLILVWSFFSFSSISPN 59

Query:    56 FDSTPLSEAKATSEARSPGCAANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKL 115
                T  +E   +S   S G   ++  DP D  +YDD +L+Y+IEK +++WDEKR+RWL L
Sbjct:    60 L--TVKNEE--SSNKCSSGI--DMSQDPTDPVYYDDPDLTYTIEKPVKNWDEKRRRWLNL 113

Query:   116 HPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPK 175
             HPSF  GA  R V+VTGSQ  PCKNPIGDHLLLRFFKNKVDYCRIHG+DIFY+N LL+PK
Sbjct:   114 HPSFIPGAENRTVMVTGSQSAPCKNPIGDHLLLRFFKNKVDYCRIHGHDIFYSNALLHPK 173

Query:   176 MNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIY 235
             MNS+WAKLP VKAAM+AHPEAEWIWWVDSDA FTDM+F  P  RY+ HN+VVHGWP +IY
Sbjct:   174 MNSYWAKLPAVKAAMIAHPEAEWIWWVDSDALFTDMDFTPPWRRYKEHNLVVHGWPGVIY 233

Query:   236 EAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQ 295
               +SWT+LNAGVFLIRNCQWSM+ +DTW  MGP+  +YAKWGQIQRS FKDK+FPESDDQ
Sbjct:   234 NDRSWTALNAGVFLIRNCQWSMELIDTWTGMGPVSPEYAKWGQIQRSIFKDKLFPESDDQ 293

Query:   296 AALIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVP-----TVR---------TLRRRHAE 341
              AL+YLLY  ++ YY  IYLEG+FYFEGYWLEIVP     T R         TLRRRHAE
Sbjct:   294 TALLYLLYKHREVYYPKIYLEGDFYFEGYWLEIVPGLSNVTERYLEMEREDATLRRRHAE 353

Query:   342 KVSESYAAQREQ-YLKEAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKAL 400
             KVSE YAA RE+ +LK    G+GS RRPF+THFTGCQPCSGDHN+MY G+TCW+GM+KA+
Sbjct:   354 KVSERYAAFREERFLKGERGGKGSKRRPFVTHFTGCQPCSGDHNKMYDGDTCWNGMIKAI 413

Query:   401 NFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDGPW 437
             NFADNQV+RKYGFVH DL  +S + PVPFD+PD+ PW
Sbjct:   414 NFADNQVMRKYGFVHSDLGKTSPLQPVPFDYPDE-PW 449
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2120145 AT4G37690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160369 XXT3 "xyloglucan xylosyltransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081625 XT1 "xylosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019090 XXT5 "xyloglucan xylosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132293 XT2 "UDP-xylosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035030 XXT4 "xyloglucan xylosyltransferase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121798 AT4G38310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPBC1289.13c SPBC1289.13c "alpha-1,2-galactosyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
POMBASE|SPAC5H10.13c gmh2 "alpha-1,2-galactosyltransferase Gmh2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O81007GT7_ARATH2, ., 4, ., -, ., -0.63830.97480.9510yesno
Q564G7GMGT1_CYATE2, ., 4, ., 1, ., -0.58950.94060.9471N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
PLN03181453 PLN03181, PLN03181, glycosyltransferase; Provision 0.0
PLN03182429 PLN03182, PLN03182, xyloglucan 6-xylosyltransferas 1e-150
pfam05637239 pfam05637, Glyco_transf_34, galactosyl transferase 7e-74
>gnl|CDD|215616 PLN03181, PLN03181, glycosyltransferase; Provisional Back     alignment and domain information 
 Score =  796 bits (2057), Expect = 0.0
 Identities = 312/453 (68%), Positives = 353/453 (77%), Gaps = 18/453 (3%)

Query: 1   MVSPELS---HQYSPMAKPHVRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRFD 57
           M +PE S   +   PM K         C +DG LFLGGA  A L+VWS +S+L+ +P   
Sbjct: 1   MAAPEASPFHYSPMPMGKYGGARTRASCFSDGVLFLGGAVVAFLLVWSLASILSPSPNPS 60

Query: 58  STPLSEAKATSEARSPGCAANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHP 117
               S     S     G   NL YDPPD TFYDD +LSYSIEK I++WDEKR  WLKLHP
Sbjct: 61  LVSSSTNARASSCPVAGSGVNLGYDPPDPTFYDDPDLSYSIEKPIKNWDEKRAEWLKLHP 120

Query: 118 SFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPKMN 177
           SFA GA ERVV+VTGSQP PCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNN LL+PKMN
Sbjct: 121 SFAPGAEERVVMVTGSQPTPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNALLHPKMN 180

Query: 178 SFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEA 237
           S+WAKLPVV+AAMLAHPEAEWIWWVDSDA FTDM+FKLPL RYR+HN+VVHGWPKLIYE 
Sbjct: 181 SYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMDFKLPLHRYRDHNLVVHGWPKLIYEK 240

Query: 238 KSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAA 297
           +SWT+LNAGVFLIRNCQWS+DFMD WA+MGP   +YAKWG+I RSTFKDK+FPESDDQ+A
Sbjct: 241 RSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSA 300

Query: 298 LIYLLYTEKDKYYDNIYLEGEFYFEGYWLEIVPT--------------VRTLRRRHAEKV 343
           L+YLLY  K+K+ D IYLEGE+YFEGYW EIV                  TLRRRHAEKV
Sbjct: 301 LVYLLYKHKEKWGDKIYLEGEYYFEGYWAEIVGRLDNITERYLEMEREDATLRRRHAEKV 360

Query: 344 SESYAAQREQYLK-EAGNGRGSWRRPFITHFTGCQPCSGDHNQMYSGETCWSGMVKALNF 402
           SE YAA RE+ LK  AG G+GSWRRPF+THFTGCQPCSGDHN+MYSG++CW+GM +ALNF
Sbjct: 361 SERYAAFREEALKGPAGGGKGSWRRPFVTHFTGCQPCSGDHNKMYSGDSCWNGMRRALNF 420

Query: 403 ADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDG 435
           ADNQVLR YGFVH DL DSS V P+PFD+P + 
Sbjct: 421 ADNQVLRAYGFVHADLLDSSTVQPLPFDYPAEA 453

Length = 453
>gnl|CDD|215617 PLN03182, PLN03182, xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|203296 pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 438
PLN03181453 glycosyltransferase; Provisional 100.0
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 100.0
KOG4748364 consensus Subunit of Golgi mannosyltransferase com 100.0
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 100.0
PF03314222 DUF273: Protein of unknown function, DUF273; Inter 99.59
KOG4748364 consensus Subunit of Golgi mannosyltransferase com 98.61
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 97.73
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 96.72
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 96.63
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 96.56
PLN00176333 galactinol synthase 96.11
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 96.08
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 93.67
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 92.91
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 91.11
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 89.5
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 85.16
>PLN03181 glycosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=9e-147  Score=1114.41  Aligned_cols=433  Identities=72%  Similarity=1.318  Sum_probs=416.3

Q ss_pred             CCcccccC-CCCCCCC--ccccccCCccccchhHhHhHHHHHHHHHHHhhhccCCCCCCCCCCcccc--ccccccCCCCC
Q 045999            1 MVSPELSH-QYSPMAK--PHVRNKTHPCLTDGFLFLGGAFFALLIVWSFSSLLNSAPRFDSTPLSEA--KATSEARSPGC   75 (438)
Q Consensus         1 ~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~   75 (438)
                      |++||.+. ++|||++  ..+++|++++++|+++|++||++|+||||++|||++|.|+  ++|.+++  ..+.++...++
T Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ga~~a~ll~~~~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~   78 (453)
T PLN03181          1 MAAPEASPFHYSPMPMGKYGGARTRASCFSDGVLFLGGAVVAFLLVWSLASILSPSPN--PSLVSSSTNARASSCPVAGS   78 (453)
T ss_pred             CCCcccCccccccccccccCCCCCCccchhhhHHHHHHHHHHHHHHHHHHhhcCCCCC--CCccccccccccccccccCC
Confidence            89999998 8899888  8899999999999999999999999999999999999888  5665544  55667777888


Q ss_pred             CCCCCCCCCCCccccCCCCccccCCCCCChHHHHHHHhhcCCCCCCCCCCcEEEEEccCCCCCCCCchHHHHHHHHHhHH
Q 045999           76 AANLRYDPPDETFYDDQELSYSIEKKIEDWDEKRKRWLKLHPSFAAGARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKV  155 (438)
Q Consensus        76 ~~~~~~~~~~~~~~~d~~~~y~~~~~~~~wd~~R~~wl~~~p~f~~~~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~  155 (438)
                      .+|++.|||++||||||+++||+|++|+|||+||++||++||+|.+++++||||||+++|.+|+++.|+++++++++||+
T Consensus        79 ~~~~~~~p~~~~f~~dp~~~ytl~~~i~~wD~kR~~Wl~~~p~~~~~~~prVViVT~Sdp~~C~~~~gD~~LlriikNR~  158 (453)
T PLN03181         79 GVNLGYDPPDPTFYDDPDLSYSIEKPIKNWDEKRAEWLKLHPSFAPGAEERVVMVTGSQPTPCKNPIGDHLLLRFFKNKV  158 (453)
T ss_pred             ccccCCCCCCcccccCCCCceecCCCcCCHHHHHHHHHHhCCCCCCCCCCCEEEEECCCCCCCCCcccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCcEEEeccccCCCCCCccchHHHHHHHHHhCCCCcEEEEEcCCeeeecCCCCCCccccCCCCccccCCCcccc
Q 045999          156 DYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIY  235 (438)
Q Consensus       156 ~YAr~HGY~l~~~~~~~~~~~~~~W~Kv~~LR~aM~~~P~aEWvwWLDaDAlImn~~~~Lple~~~d~nlvi~~~~~lv~  235 (438)
                      +||++|||+++++++.++++++++|+|+++||++|.+||++|||||||+|||||||+++||+++|+++|+++||++++++
T Consensus       159 dYArrHGY~lf~~~a~Ld~~~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp~~sLPl~ry~~~NLvvhg~p~~vy  238 (453)
T PLN03181        159 DYCRIHGYDIFYNNALLHPKMNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDMDFKLPLHRYRDHNLVVHGWPKLIY  238 (453)
T ss_pred             HHHHHhCCcEEEeccccCccCchhhhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhhcCCccccccCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccceeeEEeCCHhHHHHHHHHHhhCCCCccccchhhhhhccccCCCCCCCchHHHHHHHHHhcCCcccccccc
Q 045999          236 EAKSWTSLNAGVFLIRNCQWSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLYTEKDKYYDNIYL  315 (438)
Q Consensus       236 ~tqD~~GLNtGsFLIRNs~WS~~fLd~W~~mgp~~P~y~~~g~~l~~~l~d~~~~e~~DQsAL~~LL~~~~~~W~~kv~~  315 (438)
                      .+|||+|||+|||||||||||++|||+|+.|||++|.|++||++|+++|+|++++|++|||||+|||.+++++|++|||+
T Consensus       239 ~~qdw~GlN~GsFLIRNcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~yl  318 (453)
T PLN03181        239 EKRSWTALNAGVFLIRNCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYL  318 (453)
T ss_pred             ccccccccceeeeEEecCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeeccchhccccchH--------------HHHhhhcchhhhhHHHHHHHHHh-hcCCCCCCCCCCceeeCCCCCCCC
Q 045999          316 EGEFYFEGYWLEIVPTVR--------------TLRRRHAEKVSESYAAQREQYLK-EAGNGRGSWRRPFITHFTGCQPCS  380 (438)
Q Consensus       316 e~~y~l~gyw~~iv~~~~--------------~lr~~~a~~~~~~~~~~~~~y~~-~~~~g~~~~r~dFVvHFaGC~~c~  380 (438)
                      |++|||||||.+||++|+              .|||||||++++.|++.||+|++ .+|+|.|++||||||||+|||||+
T Consensus       319 E~~yy~~GyW~~iv~~~e~~~~~y~~~er~~~~lrrrhae~~~~~y~~~re~~~~~~~~~G~g~~R~PfvTHF~GC~pC~  398 (453)
T PLN03181        319 EGEYYFEGYWAEIVGRLDNITERYLEMEREDATLRRRHAEKVSERYAAFREEALKGPAGGGKGSWRRPFVTHFTGCQPCS  398 (453)
T ss_pred             ecceeeeeeHHHHHhHHHHHHHHHHHhhhcchhhhhhhhhhhhhhhhhhhhhhhccCCCCCCCCccCcccccccCccccC
Confidence            999999999999999973              58999999999999999999998 578899999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHHHHhhhhHHHHHHhCccCCCCCCCCCccccCCCCCCCC
Q 045999          381 GDHNQMYSGETCWSGMVKALNFADNQVLRKYGFVHPDLRDSSLVSPVPFDFPDDG  435 (438)
Q Consensus       381 ~~~~~~y~~~~C~~~M~ra~nfad~qvl~~yg~~h~~l~~~~~v~~~~f~~p~~~  435 (438)
                      |.+|++|++++||++|+||||||||||||+|||+|++|++.+.|+|||||||++.
T Consensus       399 g~~n~~Y~~~~C~~~m~ra~nFaDnQvl~~yGf~h~~l~~~~~v~p~~fdypa~~  453 (453)
T PLN03181        399 GDHNKMYSGDSCWNGMRRALNFADNQVLRAYGFVHADLLDSSTVQPLPFDYPAEA  453 (453)
T ss_pred             CCCCCCCCHHHHHHHHHHHhccchHHHHHHhCcccccccCCCccccCCCCCCCCC
Confidence            9999999999999999999999999999999999999996568999999999963

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function Back     alignment and domain information
>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>PLN00176 galactinol synthase Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query438
2p6w_A213 VP54, putative glycosyltransferase (mannosyltransf 2e-10
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A* Length = 213 Back     alignment and structure
 Score = 59.2 bits (142), Expect = 2e-10
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 5/113 (4%)

Query: 152 KNKVDYCRIHGYDIFYNNVLLN--PKMNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFT 209
           +   +YC IHGY+ +Y         +    + +  +++ A    P  EW  W+DSD    
Sbjct: 27  ELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFLWLDSDVYVN 86

Query: 210 DMEFKLPLERYRNHNVVVHGWPKLIYEAKSWTSLNAGVFLIRNCQWSMDFMDT 262
                 P+  + + +     +            +N GV   +        ++ 
Sbjct: 87  PKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGV---KFVHKDALEIEK 136

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
2p6w_A213 VP54, putative glycosyltransferase (mannosyltransf 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 96.02
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 95.55
3tzt_A276 Glycosyl transferase family 8; structural genomics 92.6
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 92.58
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A* Back     alignment and structure
Probab=100.00  E-value=7.8e-41  Score=310.69  Aligned_cols=135  Identities=21%  Similarity=0.466  Sum_probs=122.9

Q ss_pred             CCCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHhCCcEEEeccccCCC--CCCccchHHHHHHHHHhCCCCcEEE
Q 045999          123 ARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPK--MNSFWAKLPVVKAAMLAHPEAEWIW  200 (438)
Q Consensus       123 ~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~HGY~l~~~~~~~~~~--~~~~W~Kv~~LR~aM~~~P~aEWvw  200 (438)
                      .+|||+||||++|++|      ++++++++||++||++|||+++++++.+.+.  +...|.|.++||++|.+||++||||
T Consensus         4 ~~p~IllvtGs~p~ew------~yl~ksiKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~khPeAEWfW   77 (213)
T 2p6w_A            4 TTPCITILSGHFPKET------IYARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFL   77 (213)
T ss_dssp             --CCEEEEEECSCTTC------HHHHHHHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHHCTTCSEEE
T ss_pred             CCceEEEEeCCCCCCc------HHHHHHHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHHCCCceEEE
Confidence            4799999999999986      8999999999999999999999998776554  5667999999999999999999999


Q ss_pred             EEcCCeeeecCCCCCCcccc---CCCCccccCCCcccccCCCCCcccceeeE-------EeCCHhHHHHHHHHHhh
Q 045999          201 WVDSDAAFTDMEFKLPLERY---RNHNVVVHGWPKLIYEAKSWTSLNAGVFL-------IRNCQWSMDFMDTWANM  266 (438)
Q Consensus       201 WLDaDAlImn~~~~Lple~~---~d~nlvi~~~~~lv~~tqD~~GLNtGsFL-------IRNs~WS~~fLd~W~~m  266 (438)
                      |||+||+||||++++|++.+   +++|+++|||.++++.+   .||||||||       |||||||++|||+|+.|
T Consensus        78 WLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~---~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~  150 (213)
T 2p6w_A           78 WLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGS---YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF  150 (213)
T ss_dssp             EECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSS---SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST
T ss_pred             EecCCceeecCCCCCcHHHccccccCceeecccccccccc---ccccceeeeecccchhhhhceeehhhhhcccCC
Confidence            99999999999999999999   89999999998876622   499999999       99999999999999975
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query438
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 97.13
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 96.55
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=97.13  E-value=0.00052  Score=63.10  Aligned_cols=57  Identities=14%  Similarity=0.096  Sum_probs=36.4

Q ss_pred             HHHHHHhCCcEEEeccc---c--CCCCCCccchHHHHHHHHH-hCCCCcEEEEEcCCeeeecC
Q 045999          155 VDYCRIHGYDIFYNNVL---L--NPKMNSFWAKLPVVKAAML-AHPEAEWIWWVDSDAAFTDM  211 (438)
Q Consensus       155 ~~YAr~HGY~l~~~~~~---~--~~~~~~~W~Kv~~LR~aM~-~~P~aEWvwWLDaDAlImn~  211 (438)
                      ......++..+.+....   +  .+.....|++..+.|=.+- ..|+++-|+|||+|++|...
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~d  111 (282)
T d1ga8a_          49 AANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDS  111 (282)
T ss_dssp             HHTSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSC
T ss_pred             HHHHHHcCCeEEEEECCchHhccccccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecc
Confidence            34456678888775532   1  1223344666555543332 35899999999999999873
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure