Citrus Sinensis ID: 046008


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620----
MDGDDSVQHLQFNSGTNVKLRSRKSASESFLRPRVKKMDGEEKKCESKKRSKPVEIGFDSDDDEPIGSLFKLKKQRNPKKAKGQKIEAREDKVTVEDDGLVGGMDDTLASFRKKLKGPKKDAGSGVLNGRGSALNGSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCDDDSKCLCCRGDSLEDQKEEELSTFFQRTPSGLLRKSRTNSGSKQNIKEWSLRDGSIPSSEGDSKSLMRSQSVSASKLSRKDPKSDDNSNTVSNLRTLELDSDQCKKVGPMLETYHSNVQDPCSSNKVCDSDGKAHTCLPVGHASASGQKARSDTQTLDELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALDLQSNSISAMNVSSPDPEISSSSTGKEVSLPCAEDELASKSCKTASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANGGSPSSVAPDENGSFTEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVLINEQGFLENHQVMDYEQALRTRDKFDSSSTTLTEAENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAEVEAMEAAQMQSESEGDEVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKASSRLKLLKQSTAVDSIKRKSLKDPSSGKPPLHSHHGGLESKVSPGSHLTSNANIKKENGKTIKLGSELEDKCLLCLKKNKLHSLRQKLLERQLKQLL
cccccccccccccccccEEEcccccccccccHHHccccccHHHHcccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccccccEEcccccccccccccccEEEcccccccccccccccHHHHHHHccccEEEEcccccEEEccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHcccccccEEEEEEcccccccccccccEEEEcccccEEEccEEEEEccccHHccccccccccccHHHHHHHHHccccEEEEEEEEEcccccccccccEEEEcccccccccccEEEEccccccccEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccccHHHHHHHcccccccEEEcccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHccccHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHc
cccccccEEEccccccEEEEccccccccccccccHHccccccHccccccccccEEEcccccccccccHHHHEccccccccccccccccccccEEEccccccccccHHHHHHHHHHcccccccccccEEEcccccccEcccccEEEEEEccccccEEEEEEcccccccccccHHHHcccccccccccccEEEEccccEcccccccccccccccccccHHHHHHHHHHcccccEEEcccccccccccEEEEEEcccccccccccccccccccccHHHHHHHcccccccccccccccHcccccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccEcccccccccccccccEEEccccccccHcccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccEEcccEEEEccccccccccccccccccccccHccccccccccccccccccccccccccccHHcccccccHHHccccccccccccHHHHHHcccccEEcccccHHHHHHHccccccccccccccccccccccccccHHHcccccccEEEEEEcccHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHcccHHHccccccccccccHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccEEEEcccccccccEEEEcccccEEEEEccccccccEEccccEEEcccccHHHccHHHHHcHHHcccccccHHHHHHHHHHccccccccccccccccEEccccccccccccccccccccccHHcccccccccccccccccccccccccEEEEEccEHHHHHHHHHHHHccccEEEEEcccccEccccEEEEcccEEEEccccEEEcccccccccccccHHHHHHHHHccEEEEEcccccEEEccccccccHHHHHHHHHHHHHHccHHHHHHHHHcHccccccHHHHHHHHHHHccHccccccHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccHEEcccccccccccccccccEEcccccHHHHHHHHccccEEEccEEEEEEEccccEEEEccccEEEEEEcccEEEEEcEEEEEEcHHHHHcccEEccccccHHHHHHHHHcccccEEEEEEEEccccccccccEEEEEccccccccEEEEEEcccccccccEEEEEEHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccccEEEEcccccccHHHHHccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHcccccccEcEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccEEEcccccccHHHHHHHHHHHHHHHc
mdgddsvqhlqfnsgtnvklrsrksasesflrprvkkmdgeekkceskkrskpveigfdsdddepigslfklkkqrnpkkakgqkiearedkvtveddglvggmdDTLASFRKKlkgpkkdagsgvlngrgsalngsldddwvldvklapkhdekvgvscedgsgvtldKWVETKCKERvkrskidskmtiignhvvcdddskclccrgdsledqKEEELSTFfqrtpsgllrksrtnsgskqnikewslrdgsipssegdskslMRSQsvsasklsrkdpksddnsntvsnlrtleldsdqckkvgpmletyhsnvqdpcssnkvcdsdgkahtclpvghasasgqkarsdtqtldELKLSSMEKASTLILdvvevpdpascsKAMEEFhefdgesdrgftdaldlqsnsisamnvsspdpeisssstgkevslpcaedelaskscktASKQIHVSASEKILQATSKLLTqkslgaekseswfnfdqcpadssnkenaipsddeyanggspssvapdengsftedtlsmpdyenrdtKLSAVQRAVRNAKKrrlgdmayegdADWEVLINEQGFLENHQVMDYEQALrtrdkfdsssttlteaeNTGAAAVAVGLKaraagpierIKFKEILKRRGGLQEYLECRNQILSlwsgdvgrilpltecgvsdtplgdepsrASLIREIYKFLdqsgyinvgiastkekadhnAKHSYKLLKEErlekssgasiadseDGVAFILGQIkssettteakhgvecndgnqqigiktggsmtpelpneirqkesvvddcqqrvdsdpkasnrlvgvdvscddpscgmvdggtvpltieerseservqsascddagenhylrcdidvkKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNriggrvytdrtslsvpvdlgasiitgveadvaterradpsslVCAQLGleltvlnsdcplydivsgqkvpaNVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARlgrgredasmhnsmdvysktssvdsrvpdkdcsredilspverRVMDWHFANLEYGCAALLKevslpfwnqddvyggfggahcmikGGYSTVVEALGKELLIHHNHvvtdisysfkdsdlsdgqsrvkvstsngsefsgdavLITVPlgclkaesimfspplpqwkySAIQRLGFGVLNKVVLEFAEVFWDDTVDYFgataketdlrgrcfmfwnvrktvgaPVLIALVVGkaavdgqnvspsdhvNHAVMVLRQIFgaasvpdpvasvvtdwgrdpfsygaysyvatgasgedydilgrpvenclffageatckehpdtvggAMLSGLREAVRIIDILTTGNDFTAEVEAMEAAQMqsesegdeVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVatlksfagtreglTTLNSWILdsmgkdgtQLLRHCVRLLVRVSTDLLAVRLSgigktvreKVCVHTSRDIRAIASQLVSVWLEVFRKEKASSRLKLLKQStavdsikrkslkdpssgkpplhshhggleskvspgshltsnanikkengktiklgSELEDKCLLCLKKNKLHSLRQKLLERQLKQLL
mdgddsvqhlqfnsgtnvklrsrksasesflrprvkkmdgeekkceskkrskpveigfdsdddepigslfklkkqrnpkkakgqkiearedkvtveddglvggmdDTLASFRKklkgpkkdagsgvlngrgsalngsldddWVLDVKLapkhdekvgvscedgsgvtldkwvetkckervkrskidskmtiignhvvcdddskCLCCRGDSLEDQKEEElstffqrtpsgllrksrtnsgskqnikewslrdgsipssegdskslmRSQSVsasklsrkdpksddnsntvsnlrtleldsdqCKKVGPMLETYHSNVQDPCSSNKVCDSDGKAHTCLPVghasasgqkarsdTQTLDELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALDLQSNSISAMNVSSPDPEISSSSTGKEVSLPCAEDELASKSCKTASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANGGSPSSVAPDENGSFTEdtlsmpdyenrdtklsaVQRAVRnakkrrlgdmayegDADWEVLINEQGFLENHQVMDYEQALRTRDKFDsssttlteaentgaaAVAVGLKaraagpierikfKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTecgvsdtplgdepsRASLIREIYKFLDQSGYINVGIAstkekadhNAKHSYKLLKEERLEKssgasiadsedGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQrvdsdpkasnrlvgvdvscddpscgmvDGGTVPLTIEerseservqsascddagenhYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLearnriggrvytdrtslsvpvdlgasiITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLgrgredasmhnsmdvysktssvdsrvpdkdcsredilspveRRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVstsngsefsgdaVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAEVEAMEAAqmqsesegdevrDITRRLEAVelsnvlyknslDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAvrlsgigktvrekvcvHTSRDIRAIASQLVSVWLEVFRKekassrlkllkqstavdsikrkslkdpssgkpplhshhggleskvspgshltsnanikkengktikLGSELEDKCLLCLkknklhslrQKLLERQLKQLL
MDGDDSVQHLQFNSGTNVKLRSRKSASESFLRPRVKKMDGeekkceskkrskPVEIGFDSDDDEPIGSLFKLKKQRNPKKAKGQKIEAREDKVTVEDDGLVGGMDDTLASFRKKLKGPKKDAGSGVLNGRGSALNGSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCDDDSKCLCCRGDSLEDQKEEELSTFFQRTPSGLLRKSRTNSGSKQNIKEWSLRDGSIPSSEGDSKSLMRSQSVSASKLSRKDPKSDDNSNTVSNLRTLELDSDQCKKVGPMLETYHSNVQDPCSSNKVCDSDGKAHTCLPVGHASASGQKARSDTQTLDELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALDLQSNSISAMNVsspdpeissssTGKEVSLPCAEDELASKSCKTASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANGGSPSSVAPDENGSFTEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVLINEQGFLENHQVMDYEQALRTRDKFDSSSTTLTEAENTgaaavavglkaraagPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYalkrrrmarlgrgrEDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGaasvpdpvasvvTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTaeveameaaqmqseseGDEVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQllrhcvrllvrvSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKASSRLKLLKQSTAVDSIKRKSLKDPSSGKPPLHSHHGGLESKVSPGSHLTSNANIKKENGKTIKLGSELEDkcllclkknklHSlrqkllerqlkqll
***************************************************************************************************************************************GSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCDDDSKCLCCRG****************************************************************************************************************************************************************LILDVVE***********************************************************************************************************************************************************************************GDMAYEGDADWEVLINEQGFLENHQVMDYEQA********************GAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPL*****RASLIREIYKFLDQSGYINVGIA************************************VAFILG****************************************************************VGVDVSCDDPSCGMVDGG************************ENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGE**********************************************************ILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSF**********************SGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAE********************ITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRK*********************************************************************ELEDKCLLCLKKNKLH***************
***********FNS************************************************DEPIGSLF********************************GMDDTLASFR*************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************F***************************************************************************GDADWEVLINEQ***********************************AAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECG*************SLIREIYKFLDQSGYINV****************************************************************************************************SDPKASNRLVGVDVSCDDPSCGMVDG***************************************IIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGND*****************************************************LLQDMFFNAKTTAGRLHLAKELLNLPVA*****AGTREGLTTLNSWILDSM*****QLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVF*************************************************************************************************LKQL*
MDGDDSVQHLQFNSGTN***********************************PVEIGFDSDDDEPIGSLFKLK***************REDKVTVEDDGLVGGMDDTLASFRKKLKGPKKDAGSGVLNGRGSALNGSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCDDDSKCLCCRGDSLEDQKEEELSTFFQRTPSGLLR***********IKEWSLRD*************************************VSNLRTLELDSDQCKKVGPMLETYHSNVQDPCSSNKVCDSDGKAHTCLPVG***************LDELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALDLQSNSISA********************LPCAEDELASKSCKTASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANGGSPSSVAPDENGSFTEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVLINEQGFLENHQVMDYEQALRTR***************TGAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIASTK********HSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQK**************PKASNRLVGVDVSCDDPSCGMVDGGTVPLTIE*************DDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDV****************SREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSF********************EFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAEVEAM**************RDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKASSRLKLLKQSTAVD**********************GLESKVSPGSHLTSNANIKKENGKTIKLGSELEDKCLLCLKKNKLHSLRQKLLERQLKQLL
******VQHL***SGTNVKLRS************************************DSDDDEPIGSLFKLKK******************VTV**DGLVGGMDDTLASFRKKLKGP******GVLNGRGSALNGSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCD******************EELSTFFQRTPSGLLRKSRTNSG**QNIKEWSLRDG******************************************************************************************************LDELKLSSMEKASTLILDVVEVPDPASCS***************************************************************************EKILQATSKLLTQKSLGAEKSESWFNFDQ******************************************P************************GDMAYEGDADWEVLINEQGFLENHQ****EQALRTRDKFDSSSTTLTEAENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIASTKEK*****KHSYKLLKE*RLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDP*******GVDV*C***SCGMVDGGTVPLTIE**************************DVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTG******************SEGDEVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKAS***********************************************************TIKLGSELEDKCLLCLKKNKLHSLRQKLLERQLKQLL
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MDGDDSVQHLQFNSGTNVKLRSRKSASESFLRPRVKKMDGEEKKCESKKRSKPVEIGFDSDDDEPIGSLFKLKKQRNPKKAKGQKIEAREDKVTVEDDGLVGGMDDTLASFRKKLKGPKKDAGSGVLNGRGSALNGSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCDDDSKCLCCRGDSLEDQKEEELSTFFQRTPSGLLRKSRTNSGSKQNIKEWSLRDGSIPSSEGDSKSLMRSQSVSASKLSRKDPKSDDNSNTVSNLRTLELDSDQCKKVGPMLETYHSNVQDPCSSNKVCDSDGKAHTCLPVGHASASGQKARSDTQTLDELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALDLQSNSISAMNVSSPDPEISSSSTGKEVSLPCAEDELASKSCKTASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANGGSPSSVAPDENGSFTEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVLINEQGFLENHQVMDYEQALRTRDKFDSSSTTLTEAENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAEVEAMEAAQMQSESEGDEVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKASSRLKLLKQSTAVDSIKRKSLKDPSSGKPPLHSHHGGLESKVSPGSHLTSNANIKKENGKTIKLGSELEDKCLLCLKKNKLHSLRQKLLERQLKQLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1624 2.2.26 [Sep-21-2011]
Q9CAE3789 Lysine-specific histone d no no 0.264 0.544 0.400 7e-88
Q8VXV7844 Lysine-specific histone d no no 0.266 0.511 0.4 1e-86
Q6Z690849 Lysine-specific histone d no no 0.256 0.491 0.379 5e-83
Q6YYZ1763 Lysine-specific histone d no no 0.254 0.541 0.383 1e-82
Q01H90811 Lysine-specific histone d N/A no 0.263 0.527 0.405 2e-80
Q7XUR2811 Lysine-specific histone d no no 0.263 0.527 0.403 5e-80
Q9LID0746 Lysine-specific histone d no no 0.264 0.576 0.397 4e-79
Q6ZQ88853 Lysine-specific histone d yes no 0.192 0.366 0.433 2e-70
O60341852 Lysine-specific histone d yes no 0.192 0.367 0.433 3e-70
Q8NB78822 Lysine-specific histone d no no 0.275 0.543 0.340 1e-65
>sp|Q9CAE3|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana GN=FLD PE=1 SV=1 Back     alignment and function desciption
 Score =  327 bits (837), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 198/494 (40%), Positives = 263/494 (53%), Gaps = 64/494 (12%)

Query: 861  KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTS---LSVPVDLGASI 917
            K  +I++GAG +GL AAR L R GF VTVLE R R GGRVYT +     +    DLG S+
Sbjct: 184  KSSVIIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKKMEANRVGAAADLGGSV 243

Query: 918  ITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNS 977
            +TG           +P  ++  QLG  L  +   CPLY  V G+ V  +VD  +E  FN 
Sbjct: 244  LTGT--------LGNPLGIIARQLGSSLYKVRDKCPLYR-VDGKPVDPDVDIKVEVAFNQ 294

Query: 978  LLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVD 1037
            LLD    L    G+ +M +SL   LE                                  
Sbjct: 295  LLDKASKLRQLMGDVSMDVSLGAALE--------------------------------TF 322

Query: 1038 SRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCM 1097
             +V   D + E      E  + +WH ANLEY  A L+ ++SL FW+QDD Y   GG HC 
Sbjct: 323  RQVSGNDVATE------EMGLFNWHLANLEYANAGLVSKLSLAFWDQDDPYD-MGGDHCF 375

Query: 1098 IKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLI 1157
            + GG   +V+AL + + I +   V  I Y         G + VKV+  N   + GD VL 
Sbjct: 376  LPGGNGRLVQALAENVPILYEKTVQTIRY---------GSNGVKVTAGN-QVYEGDMVLC 425

Query: 1158 TVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKET 1217
            TVPLG LK  SI F P LPQ K   I+RLGFG+LNKV + F  VFW   +D FG   ++ 
Sbjct: 426  TVPLGVLKNGSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVFWSTDLDTFGHLTEDP 485

Query: 1218 DLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIF--GAASV 1275
            + RG  F+F++     G  +LIALV G+AA   + + P+D V   + +LR I+     +V
Sbjct: 486  NYRGEFFLFYSYAPVAGGALLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYEPQGINV 545

Query: 1276 PDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPV-ENCLFFAGEATCKEHPDTV 1334
            PDP+ +V T WG DPFS G+YS VA GASG+DYDIL   V +  LFFAGEAT + +P T+
Sbjct: 546  PDPLQTVCTRWGGDPFSLGSYSNVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATM 605

Query: 1335 GGAMLSGLREAVRI 1348
             GA ++GLREA  +
Sbjct: 606  HGAFVTGLREAANM 619




Probable histone demethylase that promotes flowering independently of the photoperiod and vernalization pathways by repressing FLOWERING LOCUS C (FLC), a floral repressor that blocks the transition from vegetative to reproductive development. Probably mediates histone H3 'Lys-4' demethylation at FLC locus. Seems to act in partial redundancy with LDL1 and LDL2 to repress FLC expression. Required for histone H4 deacetylation of FLC locus. May be a component of the histone deacetylase complex.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: -EC: .EC: -EC: .EC: -
>sp|Q8VXV7|LDL1_ARATH Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis thaliana GN=LDL1 PE=1 SV=1 Back     alignment and function description
>sp|Q6Z690|LDL1_ORYSJ Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0755200 PE=2 SV=1 Back     alignment and function description
>sp|Q6YYZ1|LDL2_ORYSJ Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa subsp. japonica GN=Os08g0143400 PE=2 SV=1 Back     alignment and function description
>sp|Q01H90|LDL3_ORYSI Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. indica GN=B0103C08-B0602B01.13 PE=2 SV=1 Back     alignment and function description
>sp|Q7XUR2|LDL3_ORYSJ Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa subsp. japonica GN=Os04g0560300 PE=2 SV=2 Back     alignment and function description
>sp|Q9LID0|LDL2_ARATH Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis thaliana GN=LDL2 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a PE=1 SV=2 Back     alignment and function description
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A PE=1 SV=2 Back     alignment and function description
>sp|Q8NB78|KDM1B_HUMAN Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1624
2240858021669 hypothetical protein POPTRDRAFT_73001 [P 0.917 0.892 0.567 0.0
2240620451655 hypothetical protein POPTRDRAFT_643019 [ 0.766 0.751 0.620 0.0
359492715 2145 PREDICTED: uncharacterized protein LOC10 0.657 0.497 0.687 0.0
255538844 1947 lysine-specific histone demethylase, put 0.680 0.567 0.664 0.0
356552077 1866 PREDICTED: uncharacterized protein LOC10 0.633 0.550 0.654 0.0
356562385 1875 PREDICTED: uncharacterized protein LOC10 0.624 0.540 0.648 0.0
357466899 2063 Lysine-specific histone demethylase-like 0.631 0.496 0.659 0.0
357438195 1935 Lysine-specific histone demethylase-like 0.654 0.549 0.640 0.0
449470112 1909 PREDICTED: uncharacterized protein LOC10 0.628 0.534 0.639 0.0
449514663 1886 PREDICTED: uncharacterized protein LOC10 0.618 0.532 0.636 0.0
>gi|224085802|ref|XP_002307701.1| hypothetical protein POPTRDRAFT_73001 [Populus trichocarpa] gi|222857150|gb|EEE94697.1| hypothetical protein POPTRDRAFT_73001 [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1667 bits (4318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 958/1687 (56%), Positives = 1157/1687 (68%), Gaps = 197/1687 (11%)

Query: 19   KLRSRKSASESFLRPRVKKMDGEEKKCESKKRSKPVEIGFDSDDDEPIGSLFKLKKQRNP 78
            KL S+K  S++ L+PRV K   E+K+   K+    +E G DSDD+EPIGSLF+LK+ RNP
Sbjct: 15   KLGSQKGLSKNLLKPRVNKGMEEQKELLGKQ----IEFGIDSDDNEPIGSLFRLKRPRNP 70

Query: 79   KKAKG--QKIEAREDKVTVEDDGLVGGMDDTLASFRKKLKGPKKDAGSGVLNGRGSALNG 136
            KK K   +KIE REDK+  ED+ L GGMDDTLASF+KKLK PKK  GS       SA+  
Sbjct: 71   KKVKVVLEKIEVREDKLVTEDEDL-GGMDDTLASFKKKLKAPKKGLGSV------SAIQN 123

Query: 137  SLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHV 196
              + D +LD                      ++K V+ K KER  +     K    G   
Sbjct: 124  --EGDELLDG--------------------NVEKKVQNKRKERASKVGSGWKRVRTGGDA 161

Query: 197  VCDDDSKCLCCRGDSLEDQKEEEL-----------------STFFQRTPSGLLRKSRTNS 239
              DDDS+ L  +G  LE+Q+EE L                 S F+Q+  SG +RKS  NS
Sbjct: 162  AVDDDSEGLGSQGALLENQEEESLLPGESSSQSLDKLEDSISAFYQKKQSGSVRKSCANS 221

Query: 240  GSKQNIKEWSLRDGSIPSS---EGDSK----SLMRSQSVSASKLSRKDPKSDDNSNTVSN 292
             SKQ  +   L     P +    G SK    S  RS  VS+  +  KD +  D+S+ V+N
Sbjct: 222  SSKQINRVQCLEARLSPETGFGSGGSKDVDLSTFRSSPVSS--VVCKDLEGGDSSHIVAN 279

Query: 293  -----------LRT---------------LELDSDQCKKVG------------------- 307
                       L T               +E +SD+ K +                    
Sbjct: 280  SSLLDSTSRQILNTKNQRLDNGFGETSYCIEENSDRIKGLSVSKDESMKSNDKRHGKSSE 339

Query: 308  ----------PMLETYHSNV-----QDPCSSNKVCDSDGKAHTCLPV-----GHASASGQ 347
                      P L + H  +     QDPC S+   +  GK   C P       H SA G 
Sbjct: 340  VTAEVAAPASPALGSQHGVIEDEETQDPCISDFKGEPMGKP--CSPYRIWNESH-SAPGN 396

Query: 348  KARSDTQTL-DELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALD 406
                + QTL + LKL S+ K ST                                 + L+
Sbjct: 397  NDGLEAQTLKNGLKLCSVGKVST--------------------------------RNTLE 424

Query: 407  LQSNSISAMNVSSPDPEISSSSTGKEVSL---PCAEDELASKSCKTASKQIHVSASEKIL 463
             QS  +SA  +S+ +P+IS SS G+EVS    P ++++L  +   +  K+ +V  S+  L
Sbjct: 425  QQSKGVSAACISNAEPQISISSGGREVSASSSPHSQNDL--QDLASVPKKENVEISDVRL 482

Query: 464  QATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANGGSPSSVAPDENGSF 523
                   T  S    K      F  C   + N  + + S +E ANG SP S+ P+EN S+
Sbjct: 483  SP----FTVTSREVHKC----TFSLCMNHNGNSLDYL-SINEEANGPSPRSLTPEENESY 533

Query: 524  TEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVLINEQGFLENHQVMD 583
             ED +S+PD + +D  L+AV RA+R  KKRRLGDMAYEGDADWE LINEQ FLEN+QV++
Sbjct: 534  PEDAVSVPDSDIKDGHLAAVHRAMRKPKKRRLGDMAYEGDADWETLINEQQFLENYQVVE 593

Query: 584  YEQALRTRDKFDSSSTTLTEAENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYL 643
             +++ RTR+K DSSS +  EAEN G AAV+ GLKARAAGP+E+IKFKE+LKR+GGLQEYL
Sbjct: 594  SDRSFRTREKSDSSSNS-AEAENGGIAAVSAGLKARAAGPVEKIKFKEVLKRKGGLQEYL 652

Query: 644  ECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIAST 703
            ECRN+IL LWS DV RILPL +CG+++TP  +E  RASLIR+IY+FLDQSGYIN GIAS 
Sbjct: 653  ECRNRILGLWSKDVSRILPLADCGITETPSQNESPRASLIRQIYEFLDQSGYINAGIASE 712

Query: 704  KEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDG 763
            KE A+ +A H+YKL++E+  E + GAS+AD EDGV+FILGQ+KSS+ + E K  V  +  
Sbjct: 713  KESAEPSANHNYKLVEEKTFEGNPGASVADLEDGVSFILGQVKSSQNSLEPKDRVPMD-- 770

Query: 764  NQQIGIKT--GGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGM 821
            NQ + +K    G +  +LPN    +E   +D +Q   S+ K SN L  +D    DPSC M
Sbjct: 771  NQDLALKALKSGKLV-DLPNVKECEEWPAEDIKQNSVSNTKLSNGLASLDALSTDPSCTM 829

Query: 822  VDGGTVP-LTIEERSESERVQSASCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHL 880
            +D  T P +  E R+  + V+S SC + G +H L CD   +K+IIVIGAGPAGLTAARHL
Sbjct: 830  LDSRTAPVINPELRNGLQSVKSNSCAEMGGSHKLLCDSQDRKKIIVIGAGPAGLTAARHL 889

Query: 881  QRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQ 940
            QRQGFSVT+LEAR+RIGGRVYTD +SLSVPVDLGASIITGVEADV TERR DPSSL+CAQ
Sbjct: 890  QRQGFSVTILEARSRIGGRVYTDHSSLSVPVDLGASIITGVEADVTTERRPDPSSLICAQ 949

Query: 941  LGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGEHAMKMSLED 1000
            LGLELTVLNSDCPLYDIV+G+KVP ++DE LEAE+NSLLDDMVL++AQKG+HAMKMSLED
Sbjct: 950  LGLELTVLNSDCPLYDIVTGEKVPTDLDEELEAEYNSLLDDMVLVIAQKGQHAMKMSLED 1009

Query: 1001 GLEYALKRRRMARLGRGREDASMHNSMDVY--SKTSSVDSRVPDKDCSREDILSPVERRV 1058
            GL YALK RRMA  G   ++    N++D    SKT SVD   P+   S+E+ILSP+ERRV
Sbjct: 1010 GLNYALKTRRMAHPGAFFDETESGNAVDALYDSKTCSVDGGAPEN--SKEEILSPLERRV 1067

Query: 1059 MDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHN 1118
            MDWHFA+LEYGCAA LKEVSLP+WNQDDVYGGFGGAHCMIKGGYS VVE+LG+ L IH N
Sbjct: 1068 MDWHFAHLEYGCAASLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSNVVESLGERLPIHLN 1127

Query: 1119 HVVTDISYSFKDSDLS-DGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQ 1177
            HVVTDISY  KD+  S   +S+VKV TSNGSEF GDAVLITVPLGCLKAE+I FSPPLPQ
Sbjct: 1128 HVVTDISYGIKDARASVSHRSKVKVCTSNGSEFLGDAVLITVPLGCLKAEAIKFSPPLPQ 1187

Query: 1178 WKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPV 1237
            WK S+IQRLGFGVLNKVVLEF +VFWDD++DYFGATA+ETD RG CFMFWNV+KTVGAPV
Sbjct: 1188 WKRSSIQRLGFGVLNKVVLEFPDVFWDDSMDYFGATAEETDRRGHCFMFWNVKKTVGAPV 1247

Query: 1238 LIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYS 1297
            LIALV GKAA+DGQ +S SDHV+HA+MVLR++FG A VPDPVASVVTDWGRDPFSYGAYS
Sbjct: 1248 LIALVAGKAAIDGQRMSSSDHVSHALMVLRKLFGEALVPDPVASVVTDWGRDPFSYGAYS 1307

Query: 1298 YVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGND 1357
            YVA G+SGEDYDILGRPVENC+FFAGEATCKEHPDTVGGAM+SGLREAVRIIDIL+ G D
Sbjct: 1308 YVAIGSSGEDYDILGRPVENCVFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILSMGTD 1367

Query: 1358 FTAEVEAMEAAQMQSESEGDEVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFF 1417
            FT EVEAME AQ  SE E DEVRDIT+RLEAVELSNVLYKNSLDRA +LTRE+LL+DMFF
Sbjct: 1368 FTTEVEAMEGAQRHSEVERDEVRDITKRLEAVELSNVLYKNSLDRARLLTREALLRDMFF 1427

Query: 1418 NAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKDGTQLLRHCVRLLV 1477
            +AKT AGRLHLAK+LLNLPV TLKSFAGTR+GL  LNSWILDSMGKDGTQLLRHCVRLLV
Sbjct: 1428 SAKTIAGRLHLAKKLLNLPVGTLKSFAGTRKGLAMLNSWILDSMGKDGTQLLRHCVRLLV 1487

Query: 1478 RVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKASS-RLKLLKQ 1536
             VSTDLLAVRLSGIGKTV+EKVCVHTSRDIRAIASQLVSVWLEVFR+EKAS+  +KL + 
Sbjct: 1488 LVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRREKASNGGVKLSRH 1547

Query: 1537 STAVDSIKRKSLKDPSSGKPPLHSHHGGLES----KVSPGSH--LTSNANIKKENGK--T 1588
            +TA++S KRKS  + +S KPPLH+HHG LE+    +VS  +   L SN+N++K   K  T
Sbjct: 1548 ATALESSKRKSFNNSTSRKPPLHAHHGALENSGNLQVSTSTRGPLPSNSNMEKAKSKPET 1607

Query: 1589 IKLGSEL 1595
            +K  S L
Sbjct: 1608 LKCSSRL 1614




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224062045|ref|XP_002300727.1| hypothetical protein POPTRDRAFT_643019 [Populus trichocarpa] gi|222842453|gb|EEE80000.1| hypothetical protein POPTRDRAFT_643019 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359492715|ref|XP_002280631.2| PREDICTED: uncharacterized protein LOC100255769 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255538844|ref|XP_002510487.1| lysine-specific histone demethylase, putative [Ricinus communis] gi|223551188|gb|EEF52674.1| lysine-specific histone demethylase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356552077|ref|XP_003544397.1| PREDICTED: uncharacterized protein LOC100791869 [Glycine max] Back     alignment and taxonomy information
>gi|356562385|ref|XP_003549452.1| PREDICTED: uncharacterized protein LOC100779479 [Glycine max] Back     alignment and taxonomy information
>gi|357466899|ref|XP_003603734.1| Lysine-specific histone demethylase-like protein [Medicago truncatula] gi|355492782|gb|AES73985.1| Lysine-specific histone demethylase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357438195|ref|XP_003589373.1| Lysine-specific histone demethylase-like protein [Medicago truncatula] gi|355478421|gb|AES59624.1| Lysine-specific histone demethylase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449470112|ref|XP_004152762.1| PREDICTED: uncharacterized protein LOC101212190 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449514663|ref|XP_004164443.1| PREDICTED: uncharacterized protein LOC101225931 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1624
TAIR|locus:2130454 1628 LDL3 "LSD1-like 3" [Arabidopsi 0.461 0.460 0.603 3.2e-254
UNIPROTKB|F1NDF4755 KDM1A "Uncharacterized protein 0.180 0.388 0.436 7.9e-85
RGD|1562975755 Kdm1a "lysine (K)-specific dem 0.180 0.388 0.436 8.6e-83
UNIPROTKB|F1LVQ3735 Kdm1 "Protein Kdm1" [Rattus no 0.180 0.398 0.436 8.6e-83
TAIR|locus:2091501746 LDL2 "LSD1-like2" [Arabidopsis 0.175 0.382 0.443 2.2e-82
TAIR|locus:2075870789 FLD "FLOWERING LOCUS D" [Arabi 0.181 0.372 0.427 2.6e-82
UNIPROTKB|F1STX8873 KDM1A "Uncharacterized protein 0.180 0.335 0.436 7.4e-79
MGI|MGI:1196256853 Kdm1a "lysine (K)-specific dem 0.180 0.343 0.436 1.1e-78
UNIPROTKB|F1MBS5873 KDM1A "Uncharacterized protein 0.180 0.335 0.436 1.5e-78
UNIPROTKB|O60341852 KDM1A "Lysine-specific histone 0.180 0.343 0.436 2e-78
TAIR|locus:2130454 LDL3 "LSD1-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2290 (811.2 bits), Expect = 3.2e-254, Sum P(2) = 3.2e-254
 Identities = 467/774 (60%), Positives = 571/774 (73%)

Query:   787 ESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSASCD 846
             ES+   C+  +  D K S   V ++ +  D +   V+      ++ + + S  + SA  +
Sbjct:   547 ESISKKCEASIIDDNKRS---VSMN-ALQDSTASNVEKHPETFSVAKPALSSTLSSAHSN 602

Query:   847 DAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTS 906
                    + C++  +K++IVIGAGPAGLTAARHLQRQGFSVTVLEAR+R+GGRV+TDR+S
Sbjct:   603 QMRGRDCVPCEVIDEKKVIVIGAGPAGLTAARHLQRQGFSVTVLEARSRVGGRVFTDRSS 662

Query:   907 LSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPAN 966
             LSVPVDLGASIITG+EADV +ER  DPS LVC QLGLEL+VL+  CPLYD V+G+KVPA 
Sbjct:   663 LSVPVDLGASIITGIEADVPSERMPDPSVLVCNQLGLELSVLHGFCPLYDTVTGKKVPAE 722

Query:   967 VDEALEAEFNSLLDDMVLLVAQKG-EHAMKMSLEDGLEYXXXXXXXXXXXXXXEDASMHN 1025
             +D+AL+AEFNSL+DD+ LLV + G E A KMSLEDGLEY              +   + N
Sbjct:   723 LDDALQAEFNSLIDDVDLLVEEIGKERANKMSLEDGLEYGLQRLRMPHDKVNIDKFGLLN 782

Query:  1026 SMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQD 1085
             S    SKT      + D+   ++D L+P+ERRVM+WHFA+ EYGCAA+LKEVSLP WNQD
Sbjct:   783 SS---SKTGIRGPFMQDESW-KDDFLNPLERRVMNWHFAHTEYGCAAVLKEVSLPHWNQD 838

Query:  1086 DVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTS 1145
             + YGGFGG H MIKGGYS VVE+L + L IH N +V+D+SY    S + + + +V+VSTS
Sbjct:   839 EFYGGFGGPHAMIKGGYSRVVESLAEGLDIHLNKIVSDVSYVSDVSAMDNSKHKVRVSTS 898

Query:  1146 NGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDD 1205
             NG E+ GDAVL+TVPLGCLKAE+I FSPPLP WKY++I++LGFGVLNKVVLEF  VFWDD
Sbjct:   899 NGCEYLGDAVLVTVPLGCLKAETIKFSPPLPDWKYASIKQLGFGVLNKVVLEFPTVFWDD 958

Query:  1206 TVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMV 1265
             +VDYFGATA+ETDLRG CFMFWNV+KTVGAPVLIALVVGKAA +  N S S+HVNHA+MV
Sbjct:   959 SVDYFGATAEETDLRGECFMFWNVKKTVGAPVLIALVVGKAAFEYTNKSKSEHVNHAMMV 1018

Query:  1266 LRQIFGXXXXXXXXXXXXTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEA 1325
             LR++FG            TDWG DP+SYGAYSYVA GASGEDYD+LGRPV+NCLFFAGEA
Sbjct:  1019 LRKLFGGDLVPDPVASVVTDWGTDPYSYGAYSYVAIGASGEDYDVLGRPVQNCLFFAGEA 1078

Query:  1326 TCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTXXXXXXXXXXXXXXXXGDEVRDITRR 1385
             TCKEHPDTVGGAM++G+REAVRIIDIL +GND+T                 DEVRD+ +R
Sbjct:  1079 TCKEHPDTVGGAMMTGVREAVRIIDILRSGNDYTAEIETLEKAQRKSVPVRDEVRDLIKR 1138

Query:  1386 LEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAG 1445
             LE VELSNVL            R+SLL++MFF+AKTT GRLHLAKELLNLP  TLKSFAG
Sbjct:  1139 LEVVELSNVL-----------ARQSLLRNMFFSAKTTVGRLHLAKELLNLPGETLKSFAG 1187

Query:  1446 TREGLTTLNSWILDSMGKDGTQXXXXXXXXXXXXSTDLLAVRLSGIGKTVREKVCVHTSR 1505
             T+EGL  LNSWILDSMGK+GTQ            ++DL A+RLSGIGKTV+EKVC HTSR
Sbjct:  1188 TKEGLAVLNSWILDSMGKNGTQLLRHCVHILVRVTSDLFALRLSGIGKTVKEKVCAHTSR 1247

Query:  1506 DIRAIASQLVSVWLEVFRKEKASSRLKLLKQSTAVDSIK-RKSLKDP---SSGK 1555
             DIRAIASQLV+VWL+++RKEKA+S  K L+Q+   ++ + R+ L  P   S GK
Sbjct:  1248 DIRAIASQLVNVWLDLYRKEKANSGKKSLRQANTTNTSRIRRKLNSPDTDSKGK 1301


GO:0005739 "mitochondrion" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=ISS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009851 "auxin biosynthetic process" evidence=RCA
GO:0010229 "inflorescence development" evidence=RCA
GO:0048825 "cotyledon development" evidence=RCA
UNIPROTKB|F1NDF4 KDM1A "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1562975 Kdm1a "lysine (K)-specific demethylase 1A" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1LVQ3 Kdm1 "Protein Kdm1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
TAIR|locus:2091501 LDL2 "LSD1-like2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075870 FLD "FLOWERING LOCUS D" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1STX8 KDM1A "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1196256 Kdm1a "lysine (K)-specific demethylase 1A" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1MBS5 KDM1A "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O60341 KDM1A "Lysine-specific histone demethylase 1A" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.2LOW CONFIDENCE prediction!
3rd Layer1.5.3.17LOW CONFIDENCE prediction!
3rd Layer1.4.3.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1624
PLN02976 1713 PLN02976, PLN02976, amine oxidase 0.0
PLN02328808 PLN02328, PLN02328, lysine-specific histone demeth 1e-101
PLN02529738 PLN02529, PLN02529, lysine-specific histone demeth 1e-100
PLN03000881 PLN03000, PLN03000, amine oxidase 4e-97
pfam01593444 pfam01593, Amino_oxidase, Flavin containing amine 5e-91
PLN02268435 PLN02268, PLN02268, probable polyamine oxidase 9e-88
PLN02568539 PLN02568, PLN02568, polyamine oxidase 1e-47
PLN02676487 PLN02676, PLN02676, polyamine oxidase 2e-23
COG1231450 COG1231, COG1231, Monoamine oxidase [Amino acid tr 7e-18
pfam1345066 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann- 1e-15
COG1233487 COG1233, COG1233, Phytoene dehydrogenase and relat 1e-15
COG1231450 COG1231, COG1231, Monoamine oxidase [Amino acid tr 1e-12
COG0644396 COG0644, FixC, Dehydrogenases (flavoproteins) [Ene 9e-11
PRK11749457 PRK11749, PRK11749, dihydropyrimidine dehydrogenas 2e-10
PRK11883451 PRK11883, PRK11883, protoporphyrinogen oxidase; Re 3e-10
PRK07208479 PRK07208, PRK07208, hypothetical protein; Provisio 3e-10
PRK07233434 PRK07233, PRK07233, hypothetical protein; Provisio 2e-09
PRK12771564 PRK12771, PRK12771, putative glutamate synthase (N 2e-09
TIGR03997645 TIGR03997, mycofact_OYE_2, mycofactocin system Fad 2e-09
PRK12810471 PRK12810, gltD, glutamate synthase subunit beta; R 4e-09
TIGR02734502 TIGR02734, crtI_fam, phytoene desaturase 5e-09
PRK098531019 PRK09853, PRK09853, putative selenate reductase su 7e-09
COG3349485 COG3349, COG3349, Uncharacterized conserved protei 3e-08
COG1232444 COG1232, HemY, Protoporphyrinogen oxidase [Coenzym 3e-08
TIGR02733492 TIGR02733, desat_CrtD, C-3',4' desaturase CrtD 6e-08
COG0446415 COG0446, HcaD, Uncharacterized NAD(FAD)-dependent 7e-08
pfam01266234 pfam01266, DAO, FAD dependent oxidoreductase 9e-08
pfam0443380 pfam04433, SWIRM, SWIRM domain 1e-07
PRK04176257 PRK04176, PRK04176, ribulose-1,5-biphosphate synth 1e-07
COG0665387 COG0665, DadA, Glycine/D-amino acid oxidases (deam 1e-07
PLN02676487 PLN02676, PLN02676, polyamine oxidase 5e-07
COG2072443 COG2072, TrkA, Predicted flavoprotein involved in 5e-07
COG1635262 COG1635, THI4, Ribulose 1,5-bisphosphate synthetas 5e-07
COG1148622 COG1148, HdrA, Heterodisulfide reductase, subunit 7e-07
COG0654387 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydrox 7e-07
TIGR00275400 TIGR00275, TIGR00275, flavoprotein, HI0933 family 3e-06
COG0493457 COG0493, GltD, NADPH-dependent glutamate synthase 4e-06
PRK12814652 PRK12814, PRK12814, putative NADPH-dependent gluta 4e-06
TIGR01316449 TIGR01316, gltA, glutamate synthase (NADPH), homot 5e-06
PLN02172461 PLN02172, PLN02172, flavin-containing monooxygenas 8e-06
PRK13984604 PRK13984, PRK13984, putative oxidoreductase; Provi 9e-06
PRK12831464 PRK12831, PRK12831, putative oxidoreductase; Provi 9e-06
COG3380331 COG3380, COG3380, Predicted NAD/FAD-dependent oxid 1e-05
PRK12778752 PRK12778, PRK12778, putative bifunctional 2-polypr 1e-05
COG1249454 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenas 1e-05
TIGR01317485 TIGR01317, GOGAT_sm_gam, glutamate synthases, NADH 2e-05
TIGR02032295 TIGR02032, GG-red-SF, geranylgeranyl reductase fam 2e-05
pfam01946229 pfam01946, Thi4, Thi4 family 2e-05
COG0492305 COG0492, TrxB, Thioredoxin reductase [Posttranslat 2e-05
pfam07992283 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulp 2e-05
TIGR00292254 TIGR00292, TIGR00292, thiazole biosynthesis enzyme 4e-05
TIGR033151012 TIGR03315, Se_ygfK, putative selenate reductase, Y 5e-05
COG0562374 COG0562, Glf, UDP-galactopyranose mutase [Cell env 6e-05
PRK01747662 PRK01747, mnmC, bifunctional tRNA (mnm(5)s(2)U34)- 7e-05
PRK06753373 PRK06753, PRK06753, hypothetical protein; Provisio 8e-05
pfam03486405 pfam03486, HI0933_like, HI0933-like protein 8e-05
PRK12409410 PRK12409, PRK12409, D-amino acid dehydrogenase sma 2e-04
pfam00890401 pfam00890, FAD_binding_2, FAD binding domain 2e-04
PLN02576496 PLN02576, PLN02576, protoporphyrinogen oxidase 2e-04
PRK09126392 PRK09126, PRK09126, hypothetical protein; Provisio 4e-04
TIGR01372985 TIGR01372, soxA, sarcosine oxidase, alpha subunit 4e-04
COG2081408 COG2081, COG2081, Predicted flavoproteins [General 5e-04
COG2907447 COG2907, COG2907, Predicted NAD/FAD-binding protei 5e-04
PRK08243392 PRK08243, PRK08243, 4-hydroxybenzoate 3-monooxygen 5e-04
PRK12769654 PRK12769, PRK12769, putative oxidoreductase Fe-S b 9e-04
PRK07538413 PRK07538, PRK07538, hypothetical protein; Provisio 0.001
pfam12831415 pfam12831, FAD_oxidored, FAD dependent oxidoreduct 0.001
pfam13454153 pfam13454, NAD_binding_9, FAD-NAD(P)-binding 0.001
COG0569225 COG0569, TrkA, K+ transport systems, NAD-binding c 0.001
PRK06183500 PRK06183, mhpA, 3-(3-hydroxyphenyl)propionate hydr 0.002
PRK06847375 PRK06847, PRK06847, hypothetical protein; Provisio 0.002
PRK08163396 PRK08163, PRK08163, salicylate hydroxylase; Provis 0.002
PRK05249461 PRK05249, PRK05249, soluble pyridine nucleotide tr 0.002
PRK12770352 PRK12770, PRK12770, putative glutamate synthase su 0.002
TIGR04018316 TIGR04018, Bthiol_YpdA, putative bacillithiol syst 0.003
PRK12779944 PRK12779, PRK12779, putative bifunctional glutamat 0.003
TIGR01318467 TIGR01318, gltD_gamma_fam, glutamate synthase smal 0.003
pfam13738202 pfam13738, Pyr_redox_3, Pyridine nucleotide-disulp 0.003
PRK08132547 PRK08132, PRK08132, FAD-dependent oxidoreductase; 0.003
PRK12834549 PRK12834, PRK12834, putative FAD-binding dehydroge 0.004
pfam01494349 pfam01494, FAD_binding_3, FAD binding domain 0.004
TIGR02731453 TIGR02731, phytoene_desat, phytoene desaturase 0.004
>gnl|CDD|215527 PLN02976, PLN02976, amine oxidase Back     alignment and domain information
 Score = 1880 bits (4872), Expect = 0.0
 Identities = 896/1573 (56%), Positives = 1051/1573 (66%), Gaps = 158/1573 (10%)

Query: 38   MDGEEKKCESKKRSKPVEIGFDSDDDEPIGSLFKLKKQRNPKKAK--GQKIEAREDKVTV 95
            M  +E+K  SK+  K ++IG DSDDDEPIGSLFKLK+ +N KK K   +    RE+K++ 
Sbjct: 1    MKDKERKSGSKRGLKVIQIGDDSDDDEPIGSLFKLKRPKNSKKVKVGLESTGKREEKLSA 60

Query: 96   EDDGLVGGMDDTLASFRKKLKGPKKDAGSGVLNGRGSALNGSLDDDWVLDVKLAPKHDEK 155
             D+    GMDDTLASFRK+LKGPKK  GS        A              L    +E 
Sbjct: 61   LDEDS-EGMDDTLASFRKRLKGPKKGVGSVSARMSQGA--------------LLENQEEV 105

Query: 156  VGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVVCDDDSKCLCCRGDSLEDQ 215
                         D  +    K  +  +  DS              S  L      L  +
Sbjct: 106  -------------DTVLNEGSKRSLDGNLEDSL-------------SAFLREAQAGLSRK 139

Query: 216  KEEELSTFFQRTPSGLLRKSRTNSGSKQNIKEWSLRDGSIPSSEGDSKSLMRSQS----- 270
                               S  NS  KQ  +   L  G  P SE         +      
Sbjct: 140  -------------------SCANSCGKQLNRVQGLEAGLSPGSEKVKTVSNEREGNGFHQ 180

Query: 271  VSASKLSRKDPKSDDNSNTVSNLRTLELDSDQCKKVG-PMLETYHSNVQDPCSSNKVCDS 329
            +S      +D  S+  +      ++ +    +  +V  P LE++   ++D    +    +
Sbjct: 181  ISYHTEEAEDGISEVAATKDRVSKSSDDRHGESSEVNHPALESHSGVIEDENMVD-PSIA 239

Query: 330  DGKAHTCLPVGHASASGQKARSDTQTLDELKLSSMEKASTLILDVVEVPDPASCSKAMEE 389
              +     P+G   +  +           L L S  K  T                    
Sbjct: 240  PTQEE---PLGEPCSEDRICDKKG-----LVLCSCGKQPTF------------------- 272

Query: 390  FHEFDGESDRGFTDALDLQSNSISAMNVSSPDPEISSSSTGKEVSLPCAEDELASKSCKT 449
                          AL  QS  +S   +SS + + S SS  KE S               
Sbjct: 273  ----------EIKSALSQQSKGVSTKCISSAEQQASVSSDNKETS--------------- 307

Query: 450  ASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPADSSNKENAIPSDDEYANG 509
             S ++H +     +      L  +    E        D            I       NG
Sbjct: 308  -STEVHKANFTMQMNHNGGSL--EVNTLE--------DSPSH-------DIVGSHPVCNG 349

Query: 510  GSPSSVAPDENGSFTEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVL 569
             SP S+ P+EN S+ ED +S+PD E +D KLS +QR  R AKKR+LGDMAYEGDADWE L
Sbjct: 350  ASPVSITPEENESYVEDAVSLPDSEIKDGKLSKLQRVTRKAKKRKLGDMAYEGDADWETL 409

Query: 570  INEQGFLENHQVMDYEQALRTRDKFDSSSTTLTEAENTGAAAVAVGLKARAAGPIERIKF 629
            INEQGFLEN    D +++ +TRDK DSSS    E EN GAAAV+ GLKARA GPIE+IKF
Sbjct: 410  INEQGFLENPSACDSDRSFKTRDKSDSSS-VSKEGENGGAAAVSAGLKARAVGPIEKIKF 468

Query: 630  KEILKRRGGLQEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKF 689
            KE+LKR+GGLQEYLECRN IL LWS DV RILPL +CGV+DTP  DE  RASLIRE+Y F
Sbjct: 469  KEVLKRKGGLQEYLECRNMILGLWSKDVSRILPLADCGVTDTPSEDESPRASLIREVYLF 528

Query: 690  LDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSE 749
            LDQ GYIN GIAS KEKA+ +  H+YKL++E+ LE+SSGAS+ADSEDGV+FILGQ+KSSE
Sbjct: 529  LDQRGYINAGIASEKEKAEPSTNHNYKLVEEKTLEESSGASVADSEDGVSFILGQVKSSE 588

Query: 750  TTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVG 809
            ++TE K  V  +D N   G         +LPN     E +  D QQ   S+ K +N LV 
Sbjct: 589  SSTEGKDCVLVDDENDASG---------DLPNVCECSELLASDIQQCGASNEKLNNGLVS 639

Query: 810  VDVSCDDPSCGMVDG-GTVPLTIEE-RSESERVQSASCDDAGENHYLRCDIDVKKRIIVI 867
            +D     PS  ++D   T+ +   E R+E + VQS SC + G NH + CD   +K+IIV+
Sbjct: 640  LDALSASPSSSVLDSPETLSVIKPELRNELQSVQSNSCIEMGGNHCVLCDSVDRKKIIVV 699

Query: 868  GAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVAT 927
            GAGPAGLTAARHLQRQGFSVTVLEAR+RIGGRVYTDR+SLSVPVDLGASIITGVEADVAT
Sbjct: 700  GAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYTDRSSLSVPVDLGASIITGVEADVAT 759

Query: 928  ERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVA 987
            ERR DPSSL+CAQLGLELTVLNSDCPLYD+V+G+KVPA++DEALEAE+NSLLDDMVLLVA
Sbjct: 760  ERRPDPSSLICAQLGLELTVLNSDCPLYDVVTGEKVPADLDEALEAEYNSLLDDMVLLVA 819

Query: 988  QKGEHAMKMSLEDGLEYALKRRRMARLGRG-REDASMHNSMDVY-SKTSSVDSRVPDKDC 1045
            QKGEHAMKMSLEDGLEYALKRRRM R G    E    + + D+Y S ++ VD    +K+ 
Sbjct: 820  QKGEHAMKMSLEDGLEYALKRRRMPRPGVDIDETELGNAADDLYDSASTGVDGGHCEKE- 878

Query: 1046 SREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTV 1105
            S+ED+LSP+ERRVM+WHFA+LEYGCAALLKEVSLP+WNQDDVYGGFGGAHCMIKGGYS V
Sbjct: 879  SKEDVLSPLERRVMNWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSNV 938

Query: 1106 VEALGKELLIHHNHVVTDISYSFKDSDLSDGQ-SRVKVSTSNGSEFSGDAVLITVPLGCL 1164
            VE+L + L IH NHVVTD+SY  KD+  S     +VKVSTSNGSEF GDAVLITVPLGCL
Sbjct: 939  VESLAEGLDIHLNHVVTDVSYGSKDAGASGSSRKKVKVSTSNGSEFLGDAVLITVPLGCL 998

Query: 1165 KAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCF 1224
            KAE+I FSPPLP WKYS+IQRLGFGVLNKVVLEF EVFWDD+VDYFGATA+ETDLRG+CF
Sbjct: 999  KAETIKFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWDDSVDYFGATAEETDLRGQCF 1058

Query: 1225 MFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVT 1284
            MFWNV+KTVGAPVLIALVVGKAA+DGQ++S SDHVNHA+MVLR++FG A VPDPVASVVT
Sbjct: 1059 MFWNVKKTVGAPVLIALVVGKAAIDGQSMSSSDHVNHALMVLRKLFGEALVPDPVASVVT 1118

Query: 1285 DWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLRE 1344
            DWGRDPFSYGAYSYVA GASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAM+SGLRE
Sbjct: 1119 DWGRDPFSYGAYSYVAIGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMMSGLRE 1178

Query: 1345 AVRIIDILTTGNDFTAEVEAMEAAQMQSESEGDEVRDITRRLEAVELSNVLYKNSLDRAL 1404
            AVRIIDIL TGND+TAEVEA+E AQ  SESE DEVRDIT+RLEAVELSNVLYKNSLD   
Sbjct: 1179 AVRIIDILNTGNDYTAEVEALETAQRHSESERDEVRDITKRLEAVELSNVLYKNSLDADP 1238

Query: 1405 ILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTREGLTTLNSWILDSMGKD 1464
            ILTRE+LLQ+MFF+AKTTAGRLHLAKELLNLPV TLKSFAGT+EGL TLNSWILDSMGKD
Sbjct: 1239 ILTREALLQEMFFSAKTTAGRLHLAKELLNLPVETLKSFAGTKEGLATLNSWILDSMGKD 1298

Query: 1465 GTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRK 1524
            GTQLLRHCVRLLV VSTDLLAVRLSGIGKTV+EKVCVHTSRDIRAIASQLVSVWLEVFR+
Sbjct: 1299 GTQLLRHCVRLLVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRR 1358

Query: 1525 EKASS-RLKLLKQSTAVDSIKRKSLKDPS-SGKPPLHSHHGGLESKVSPGSHLT-SNANI 1581
            EKAS+  LKLL+Q+TA +S KR+ L  PS   K  L S       K    S  +    +I
Sbjct: 1359 EKASNGGLKLLRQATANESSKRRKLNSPSTDTKGKLSSLENVKTDKSKSESLKSVGRQDI 1418

Query: 1582 KKENGKTIKLGSE 1594
            ++E G  I +  E
Sbjct: 1419 EEEEGNQIPMSEE 1431


Length = 1713

>gnl|CDD|215187 PLN02328, PLN02328, lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>gnl|CDD|178144 PLN02529, PLN02529, lysine-specific histone demethylase 1 Back     alignment and domain information
>gnl|CDD|178578 PLN03000, PLN03000, amine oxidase Back     alignment and domain information
>gnl|CDD|216593 pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase Back     alignment and domain information
>gnl|CDD|177909 PLN02268, PLN02268, probable polyamine oxidase Back     alignment and domain information
>gnl|CDD|215308 PLN02568, PLN02568, polyamine oxidase Back     alignment and domain information
>gnl|CDD|215362 PLN02676, PLN02676, polyamine oxidase Back     alignment and domain information
>gnl|CDD|224152 COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|205628 pfam13450, NAD_binding_8, NAD(P)-binding Rossmann-like domain Back     alignment and domain information
>gnl|CDD|224154 COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|224152 COG1231, COG1231, Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|223717 COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|236967 PRK11749, PRK11749, dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>gnl|CDD|237009 PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>gnl|CDD|235967 PRK07208, PRK07208, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|235977 PRK07233, PRK07233, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|237198 PRK12771, PRK12771, putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>gnl|CDD|234436 TIGR03997, mycofact_OYE_2, mycofactocin system FadH/OYE family oxidoreductase 2 Back     alignment and domain information
>gnl|CDD|237213 PRK12810, gltD, glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>gnl|CDD|233988 TIGR02734, crtI_fam, phytoene desaturase Back     alignment and domain information
>gnl|CDD|236630 PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>gnl|CDD|225885 COG3349, COG3349, Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>gnl|CDD|224153 COG1232, HemY, Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|233987 TIGR02733, desat_CrtD, C-3',4' desaturase CrtD Back     alignment and domain information
>gnl|CDD|223523 COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|216400 pfam01266, DAO, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|203011 pfam04433, SWIRM, SWIRM domain Back     alignment and domain information
>gnl|CDD|235241 PRK04176, PRK04176, ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223737 COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|215362 PLN02676, PLN02676, polyamine oxidase Back     alignment and domain information
>gnl|CDD|224983 COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|224550 COG1635, THI4, Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|224070 COG1148, HdrA, Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|223727 COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>gnl|CDD|232901 TIGR00275, TIGR00275, flavoprotein, HI0933 family Back     alignment and domain information
>gnl|CDD|223567 COG0493, GltD, NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>gnl|CDD|139246 PRK12814, PRK12814, putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|130383 TIGR01316, gltA, glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>gnl|CDD|215116 PLN02172, PLN02172, flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>gnl|CDD|172486 PRK13984, PRK13984, putative oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|183780 PRK12831, PRK12831, putative oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|225915 COG3380, COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>gnl|CDD|237200 PRK12778, PRK12778, putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|224169 COG1249, Lpd, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|162300 TIGR01317, GOGAT_sm_gam, glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>gnl|CDD|233693 TIGR02032, GG-red-SF, geranylgeranyl reductase family Back     alignment and domain information
>gnl|CDD|145231 pfam01946, Thi4, Thi4 family Back     alignment and domain information
>gnl|CDD|223566 COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|219686 pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase Back     alignment and domain information
>gnl|CDD|232908 TIGR00292, TIGR00292, thiazole biosynthesis enzyme Back     alignment and domain information
>gnl|CDD|132358 TIGR03315, Se_ygfK, putative selenate reductase, YgfK subunit Back     alignment and domain information
>gnl|CDD|223636 COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234978 PRK01747, mnmC, bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>gnl|CDD|168661 PRK06753, PRK06753, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|217590 pfam03486, HI0933_like, HI0933-like protein Back     alignment and domain information
>gnl|CDD|237093 PRK12409, PRK12409, D-amino acid dehydrogenase small subunit; Provisional Back     alignment and domain information
>gnl|CDD|216176 pfam00890, FAD_binding_2, FAD binding domain Back     alignment and domain information
>gnl|CDD|215314 PLN02576, PLN02576, protoporphyrinogen oxidase Back     alignment and domain information
>gnl|CDD|236385 PRK09126, PRK09126, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|233382 TIGR01372, soxA, sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>gnl|CDD|224992 COG2081, COG2081, Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>gnl|CDD|225459 COG2907, COG2907, Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>gnl|CDD|236198 PRK08243, PRK08243, 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>gnl|CDD|183733 PRK12769, PRK12769, putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>gnl|CDD|236046 PRK07538, PRK07538, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|221798 pfam12831, FAD_oxidored, FAD dependent oxidoreductase Back     alignment and domain information
>gnl|CDD|222141 pfam13454, NAD_binding_9, FAD-NAD(P)-binding Back     alignment and domain information
>gnl|CDD|223643 COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|235727 PRK06183, mhpA, 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>gnl|CDD|235874 PRK06847, PRK06847, hypothetical protein; Provisional Back     alignment and domain information
>gnl|CDD|181262 PRK08163, PRK08163, salicylate hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|235373 PRK05249, PRK05249, soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237197 PRK12770, PRK12770, putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>gnl|CDD|188533 TIGR04018, Bthiol_YpdA, putative bacillithiol system oxidoreductase, YpdA family Back     alignment and domain information
>gnl|CDD|183740 PRK12779, PRK12779, putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|130385 TIGR01318, gltD_gamma_fam, glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>gnl|CDD|222355 pfam13738, Pyr_redox_3, Pyridine nucleotide-disulphide oxidoreductase Back     alignment and domain information
>gnl|CDD|236158 PRK08132, PRK08132, FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>gnl|CDD|183782 PRK12834, PRK12834, putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>gnl|CDD|216530 pfam01494, FAD_binding_3, FAD binding domain Back     alignment and domain information
>gnl|CDD|131778 TIGR02731, phytoene_desat, phytoene desaturase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1624
PLN02976 1713 amine oxidase 100.0
PLN03000881 amine oxidase 100.0
PLN02328808 lysine-specific histone demethylase 1 homolog 100.0
PLN02529738 lysine-specific histone demethylase 1 100.0
KOG0029501 consensus Amine oxidase [Secondary metabolites bio 100.0
PLN02268435 probable polyamine oxidase 100.0
PLN02568539 polyamine oxidase 100.0
PLN02676487 polyamine oxidase 100.0
KOG0685498 consensus Flavin-containing amine oxidase [Coenzym 100.0
COG1231450 Monoamine oxidase [Amino acid transport and metabo 100.0
PF01593450 Amino_oxidase: Flavin containing amine oxidoreduct 100.0
TIGR00562462 proto_IX_ox protoporphyrinogen oxidase. This prote 100.0
PRK12416463 protoporphyrinogen oxidase; Provisional 100.0
PLN02576496 protoporphyrinogen oxidase 100.0
PRK07233434 hypothetical protein; Provisional 100.0
PLN02612567 phytoene desaturase 100.0
PRK11883451 protoporphyrinogen oxidase; Reviewed 100.0
TIGR02731453 phytoene_desat phytoene desaturase. Plants and cya 100.0
PRK07208479 hypothetical protein; Provisional 99.97
TIGR03467419 HpnE squalene-associated FAD-dependent desaturase. 99.97
PLN02487569 zeta-carotene desaturase 99.97
TIGR02733492 desat_CrtD C-3',4' desaturase CrtD. Members of thi 99.96
COG1232444 HemY Protoporphyrinogen oxidase [Coenzyme metaboli 99.96
TIGR02732474 zeta_caro_desat carotene 7,8-desaturase. Carotene 99.96
TIGR02734502 crtI_fam phytoene desaturase. Phytoene is converte 99.95
TIGR02730493 carot_isom carotene isomerase. Members of this fam 99.94
KOG1276491 consensus Protoporphyrinogen oxidase [Coenzyme tra 99.9
COG3380331 Predicted NAD/FAD-dependent oxidoreductase [Genera 99.9
COG1233487 Phytoene dehydrogenase and related proteins [Secon 99.87
COG3349485 Uncharacterized conserved protein [Function unknow 99.82
KOG4254561 consensus Phytoene desaturase [Coenzyme transport 99.79
COG2907447 Predicted NAD/FAD-binding protein [General functio 99.77
TIGR00031377 UDP-GALP_mutase UDP-galactopyranose mutase. The ge 99.45
PTZ00363443 rab-GDP dissociation inhibitor; Provisional 99.44
COG2081408 Predicted flavoproteins [General function predicti 99.34
PF1345068 NAD_binding_8: NAD(P)-binding Rossmann-like domain 99.23
PF0443386 SWIRM: SWIRM domain; InterPro: IPR007526 The SWIRM 99.19
PRK13977576 myosin-cross-reactive antigen; Provisional 99.1
PF01266358 DAO: FAD dependent oxidoreductase; InterPro: IPR00 99.07
PRK10015429 oxidoreductase; Provisional 98.99
PRK10157428 putative oxidoreductase FixC; Provisional 98.98
TIGR01988385 Ubi-OHases Ubiquinone biosynthesis hydroxylase, Ub 98.93
PRK09126392 hypothetical protein; Provisional 98.87
COG0562374 Glf UDP-galactopyranose mutase [Cell envelope biog 98.86
COG0644396 FixC Dehydrogenases (flavoproteins) [Energy produc 98.86
PRK08773392 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 98.85
COG0654387 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and 98.82
PF03486409 HI0933_like: HI0933-like protein; InterPro: IPR004 98.81
PRK12831464 putative oxidoreductase; Provisional 98.81
PRK07364415 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 98.8
TIGR02023388 BchP-ChlP geranylgeranyl reductase. This model rep 98.79
TIGR01984382 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. T 98.79
PRK07494388 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 98.78
PRK07333403 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisio 98.77
PRK12779944 putative bifunctional glutamate synthase subunit b 98.76
PRK12409410 D-amino acid dehydrogenase small subunit; Provisio 98.75
PRK12769654 putative oxidoreductase Fe-S binding subunit; Revi 98.74
TIGR01318467 gltD_gamma_fam glutamate synthase small subunit fa 98.73
PRK05732395 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 98.72
PRK08243392 4-hydroxybenzoate 3-monooxygenase; Validated 98.71
PRK07588391 hypothetical protein; Provisional 98.71
PRK127751006 putative trifunctional 2-polyprenylphenol hydroxyl 98.71
TIGR033151012 Se_ygfK putative selenate reductase, YgfK subunit. 98.7
PRK05714405 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 98.69
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 98.69
PRK12809639 putative oxidoreductase Fe-S binding subunit; Revi 98.68
PRK08850405 2-octaprenyl-6-methoxyphenol hydroxylase; Validate 98.67
TIGR02032295 GG-red-SF geranylgeranyl reductase family. This mo 98.67
PRK08020391 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquin 98.66
PRK11259376 solA N-methyltryptophan oxidase; Provisional 98.66
PRK06185407 hypothetical protein; Provisional 98.66
PRK07236386 hypothetical protein; Provisional 98.65
PRK07608388 ubiquinone biosynthesis hydroxylase family protein 98.64
PRK08013400 oxidoreductase; Provisional 98.63
PRK07045388 putative monooxygenase; Reviewed 98.63
PLN00093450 geranylgeranyl diphosphate reductase; Provisional 98.62
TIGR02028398 ChlP geranylgeranyl reductase. This model represen 98.62
PRK06184502 hypothetical protein; Provisional 98.61
PRK00711416 D-amino acid dehydrogenase small subunit; Validate 98.61
COG1148622 HdrA Heterodisulfide reductase, subunit A and rela 98.61
PRK11728393 hydroxyglutarate oxidase; Provisional 98.61
PRK098531019 putative selenate reductase subunit YgfK; Provisio 98.61
TIGR03329460 Phn_aa_oxid putative aminophosphonate oxidoreducta 98.61
COG0579429 Predicted dehydrogenase [General function predicti 98.6
PRK06753373 hypothetical protein; Provisional 98.58
COG0665387 DadA Glycine/D-amino acid oxidases (deaminating) [ 98.56
PRK06834488 hypothetical protein; Provisional 98.56
PRK06847375 hypothetical protein; Provisional 98.55
PRK08849384 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hy 98.55
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 98.53
PRK05868372 hypothetical protein; Validated 98.53
PRK12810471 gltD glutamate synthase subunit beta; Reviewed 98.53
PRK07538413 hypothetical protein; Provisional 98.53
COG1635262 THI4 Ribulose 1,5-bisphosphate synthetase, convert 98.51
PRK01747662 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltrans 98.51
PRK12814652 putative NADPH-dependent glutamate synthase small 98.48
COG0493457 GltD NADPH-dependent glutamate synthase beta chain 98.48
PRK065671028 putative bifunctional glutamate synthase subunit b 98.46
TIGR01377380 soxA_mon sarcosine oxidase, monomeric form. Sarcos 98.45
KOG03992142 consensus Glutamate synthase [Amino acid transport 98.44
PRK06617374 2-octaprenyl-6-methoxyphenyl hydroxylase; Validate 98.42
PRK08244493 hypothetical protein; Provisional 98.41
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 98.39
PRK08132547 FAD-dependent oxidoreductase; Provisional 98.39
PRK06183538 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Va 98.38
PF05834374 Lycopene_cycl: Lycopene cyclase protein; InterPro: 98.37
TIGR01373407 soxB sarcosine oxidase, beta subunit family, heter 98.35
PRK07190487 hypothetical protein; Provisional 98.35
PF01946230 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K. 98.35
PRK06126545 hypothetical protein; Provisional 98.34
COG0578532 GlpA Glycerol-3-phosphate dehydrogenase [Energy pr 98.33
PRK12266508 glpD glycerol-3-phosphate dehydrogenase; Reviewed 98.31
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 98.31
TIGR01317485 GOGAT_sm_gam glutamate synthases, NADH/NADPH, smal 98.31
PLN02697529 lycopene epsilon cyclase 98.29
PRK13369502 glycerol-3-phosphate dehydrogenase; Provisional 98.29
TIGR01789370 lycopene_cycl lycopene cyclase. This model represe 98.27
PRK05945575 sdhA succinate dehydrogenase flavoprotein subunit; 98.24
PRK12771564 putative glutamate synthase (NADPH) small subunit; 98.23
TIGR03219414 salicylate_mono salicylate 1-monooxygenase. Member 98.23
PRK06996398 hypothetical protein; Provisional 98.22
PTZ00383497 malate:quinone oxidoreductase; Provisional 98.22
TIGR01989437 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. T 98.22
PLN02464627 glycerol-3-phosphate dehydrogenase 98.17
PRK06069577 sdhA succinate dehydrogenase flavoprotein subunit; 98.15
PRK07803626 sdhA succinate dehydrogenase flavoprotein subunit; 98.12
TIGR03364365 HpnW_proposed FAD dependent oxidoreductase TIGR033 98.07
PRK06263543 sdhA succinate dehydrogenase flavoprotein subunit; 98.04
PLN02852491 ferredoxin-NADP+ reductase 98.04
PRK06452566 sdhA succinate dehydrogenase flavoprotein subunit; 98.04
TIGR00136617 gidA glucose-inhibited division protein A. GidA, t 98.01
TIGR00275400 flavoprotein, HI0933 family. The model when search 98.0
PRK09231582 fumarate reductase flavoprotein subunit; Validated 97.99
PLN02172461 flavin-containing monooxygenase FMO GS-OX 97.97
PRK13339497 malate:quinone oxidoreductase; Reviewed 97.97
TIGR01320483 mal_quin_oxido malate:quinone-oxidoreductase. This 97.95
PRK08205583 sdhA succinate dehydrogenase flavoprotein subunit; 97.95
PRK05257494 malate:quinone oxidoreductase; Validated 97.92
PRK13984604 putative oxidoreductase; Provisional 97.88
KOG2820399 consensus FAD-dependent oxidoreductase [General fu 97.88
PRK09897534 hypothetical protein; Provisional 97.85
PRK04176257 ribulose-1,5-biphosphate synthetase; Provisional 97.84
TIGR00292254 thiazole biosynthesis enzyme. This enzyme is invol 97.83
KOG1399448 consensus Flavin-containing monooxygenase [Seconda 97.83
PTZ00188506 adrenodoxin reductase; Provisional 97.81
PF00996438 GDI: GDP dissociation inhibitor; InterPro: IPR0182 97.76
PF06100500 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross 97.74
PF01494356 FAD_binding_3: FAD binding domain; InterPro: IPR00 97.73
COG2509486 Uncharacterized FAD-dependent dehydrogenases [Gene 97.71
PF00743531 FMO-like: Flavin-binding monooxygenase-like; Inter 97.69
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 97.69
PLN02661357 Putative thiazole synthesis 97.67
COG2072443 TrkA Predicted flavoprotein involved in K+ transpo 97.64
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 97.63
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 97.62
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 97.62
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 97.6
PF12831428 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3 97.59
PRK10262321 thioredoxin reductase; Provisional 97.58
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 97.57
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 97.56
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 97.56
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 97.55
PF07156368 Prenylcys_lyase: Prenylcysteine lyase; InterPro: I 97.53
PF13454156 NAD_binding_9: FAD-NAD(P)-binding 97.53
PRK08163396 salicylate hydroxylase; Provisional 97.52
PRK06116450 glutathione reductase; Validated 97.52
PRK05976472 dihydrolipoamide dehydrogenase; Validated 97.51
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 97.5
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 97.5
PRK06475400 salicylate hydroxylase; Provisional 97.43
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 97.42
PRK06370463 mercuric reductase; Validated 97.42
COG0492305 TrxB Thioredoxin reductase [Posttranslational modi 97.4
TIGR02360390 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase. 97.4
PRK06292460 dihydrolipoamide dehydrogenase; Validated 97.39
PRK14694468 putative mercuric reductase; Provisional 97.38
TIGR02053463 MerA mercuric reductase. This model represents the 97.37
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 97.35
PF00890417 FAD_binding_2: FAD binding domain of the Pfam fami 97.31
TIGR01372985 soxA sarcosine oxidase, alpha subunit family, hete 97.31
KOG2614420 consensus Kynurenine 3-monooxygenase and related f 97.3
PRK12770352 putative glutamate synthase subunit beta; Provisio 97.29
PRK13748561 putative mercuric reductase; Provisional 97.28
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 97.26
TIGR02485432 CobZ_N-term precorrin 3B synthase CobZ. CobZ is es 97.25
TIGR01813439 flavo_cyto_c flavocytochrome c. This model describ 97.24
PRK11445351 putative oxidoreductase; Provisional 97.24
PRK06481506 fumarate reductase flavoprotein subunit; Validated 97.22
PRK14727479 putative mercuric reductase; Provisional 97.22
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 97.21
PRK05335436 tRNA (uracil-5-)-methyltransferase Gid; Reviewed 97.19
PTZ00052499 thioredoxin reductase; Provisional 97.18
PLN02927668 antheraxanthin epoxidase/zeaxanthin epoxidase 97.16
PRK08274466 tricarballylate dehydrogenase; Validated 97.14
PTZ00058561 glutathione reductase; Provisional 97.14
PRK06327475 dihydrolipoamide dehydrogenase; Validated 97.11
PRK07121492 hypothetical protein; Validated 97.11
PRK11101546 glpA sn-glycerol-3-phosphate dehydrogenase subunit 97.08
PLN02985514 squalene monooxygenase 97.07
PLN02507499 glutathione reductase 97.06
PRK12842574 putative succinate dehydrogenase; Reviewed 97.06
PLN02463447 lycopene beta cyclase 97.05
PF07992201 Pyr_redox_2: Pyridine nucleotide-disulphide oxidor 97.01
TIGR00137433 gid_trmFO tRNA:m(5)U-54 methyltransferase. This mo 97.01
PRK05192618 tRNA uridine 5-carboxymethylaminomethyl modificati 97.01
PF0007080 Pyr_redox: Pyridine nucleotide-disulphide oxidored 97.0
KOG2415621 consensus Electron transfer flavoprotein ubiquinon 96.96
PTZ00367567 squalene epoxidase; Provisional 96.96
KOG2404477 consensus Fumarate reductase, flavoprotein subunit 96.93
PRK12834549 putative FAD-binding dehydrogenase; Reviewed 96.92
PLN02546558 glutathione reductase 96.91
PRK12837513 3-ketosteroid-delta-1-dehydrogenase; Provisional 96.89
PRK07845466 flavoprotein disulfide reductase; Reviewed 96.85
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 96.84
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 96.84
PRK12844557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 96.81
PRK12835584 3-ketosteroid-delta-1-dehydrogenase; Reviewed 96.8
PRK08294634 phenol 2-monooxygenase; Provisional 96.79
PRK12839572 hypothetical protein; Provisional 96.75
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 96.75
KOG2844 856 consensus Dimethylglycine dehydrogenase precursor 96.74
COG4716587 Myosin-crossreactive antigen [Function unknown] 96.74
PF06039488 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro 96.73
PRK08255765 salicylyl-CoA 5-hydroxylase; Reviewed 96.72
KOG1800468 consensus Ferredoxin/adrenodoxin reductase [Nucleo 96.71
TIGR01812566 sdhA_frdA_Gneg succinate dehydrogenase or fumarate 96.7
TIGR03197381 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouri 96.7
PRK07843557 3-ketosteroid-delta-1-dehydrogenase; Reviewed 96.7
PF01134392 GIDA: Glucose inhibited division protein A; InterP 96.68
PTZ00153659 lipoamide dehydrogenase; Provisional 96.65
PRK08641589 sdhA succinate dehydrogenase flavoprotein subunit; 96.64
TIGR02462544 pyranose_ox pyranose oxidase. Pyranose oxidase (al 96.62
PRK07804541 L-aspartate oxidase; Provisional 96.6
PF00732296 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR0001 96.59
COG3573552 Predicted oxidoreductase [General function predict 96.58
PRK06134581 putative FAD-binding dehydrogenase; Reviewed 96.58
PRK08401466 L-aspartate oxidase; Provisional 96.58
KOG1439440 consensus RAB proteins geranylgeranyltransferase c 96.55
PRK12845564 3-ketosteroid-delta-1-dehydrogenase; Reviewed 96.51
PRK07573640 sdhA succinate dehydrogenase flavoprotein subunit; 96.5
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 96.5
PRK07057591 sdhA succinate dehydrogenase flavoprotein subunit; 96.47
PRK08958588 sdhA succinate dehydrogenase flavoprotein subunit; 96.42
PTZ00139617 Succinate dehydrogenase [ubiquinone] flavoprotein 96.41
PRK12843578 putative FAD-binding dehydrogenase; Reviewed 96.4
PLN00128635 Succinate dehydrogenase [ubiquinone] flavoprotein 96.39
PRK06175433 L-aspartate oxidase; Provisional 96.37
PRK09078598 sdhA succinate dehydrogenase flavoprotein subunit; 96.37
TIGR00551488 nadB L-aspartate oxidase. L-aspartate oxidase is t 96.36
PRK07395553 L-aspartate oxidase; Provisional 96.35
PLN02815594 L-aspartate oxidase 96.33
PF0871153 Med26: TFIIS helical bundle-like domain; InterPro: 96.32
PTZ003061167 NADH-dependent fumarate reductase; Provisional 96.28
PRK06854608 adenylylsulfate reductase subunit alpha; Validated 96.26
PRK08626657 fumarate reductase flavoprotein subunit; Provision 96.24
TIGR01811603 sdhA_Bsu succinate dehydrogenase or fumarate reduc 96.23
PRK08275554 putative oxidoreductase; Provisional 96.13
COG3075421 GlpB Anaerobic glycerol-3-phosphate dehydrogenase 96.05
PRK05329422 anaerobic glycerol-3-phosphate dehydrogenase subun 96.05
PRK08071510 L-aspartate oxidase; Provisional 96.04
TIGR01176580 fum_red_Fp fumarate reductase, flavoprotein subuni 95.99
PRK09564444 coenzyme A disulfide reductase; Reviewed 95.98
KOG2852380 consensus Possible oxidoreductase [General functio 95.9
KOG1298509 consensus Squalene monooxygenase [Lipid transport 95.89
PRK09077536 L-aspartate oxidase; Provisional 95.89
PRK13512438 coenzyme A disulfide reductase; Provisional 95.89
PRK02106560 choline dehydrogenase; Validated 95.88
TIGR02061614 aprA adenosine phosphosulphate reductase, alpha su 95.86
COG0446415 HcaD Uncharacterized NAD(FAD)-dependent dehydrogen 95.78
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 95.69
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 95.67
COG1053562 SdhA Succinate dehydrogenase/fumarate reductase, f 95.62
PRK07846451 mycothione reductase; Reviewed 95.58
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 95.57
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 95.56
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 95.52
KOG2960328 consensus Protein involved in thiamine biosynthesi 95.28
KOG0042680 consensus Glycerol-3-phosphate dehydrogenase [Ener 95.2
PRK07512513 L-aspartate oxidase; Provisional 95.16
COG1206439 Gid NAD(FAD)-utilizing enzyme possibly involved in 95.14
PRK13800 897 putative oxidoreductase/HEAT repeat-containing pro 95.07
TIGR01810532 betA choline dehydrogenase. This enzyme is a membe 95.04
PF04820454 Trp_halogenase: Tryptophan halogenase; InterPro: I 94.96
TIGR03378419 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase 94.91
PTZ00318424 NADH dehydrogenase-like protein; Provisional 94.9
COG5259531 RSC8 RSC chromatin remodeling complex subunit RSC8 94.65
KOG1279506 consensus Chromatin remodeling factor subunit and 94.43
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 94.39
COG2303542 BetA Choline dehydrogenase and related flavoprotei 94.35
KOG2665453 consensus Predicted FAD-dependent oxidoreductase [ 94.21
PF01210157 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate 94.18
KOG2853509 consensus Possible oxidoreductase [General functio 93.87
COG1902363 NemA NADH:flavin oxidoreductases, Old Yellow Enzym 93.85
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 93.76
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 93.54
PRK09754396 phenylpropionate dioxygenase ferredoxin reductase 93.5
PRK02705459 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 93.44
PLN02785587 Protein HOTHEAD 93.43
PRK01438480 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 93.41
TIGR03169364 Nterm_to_SelD pyridine nucleotide-disulfide oxidor 93.38
COG4529474 Uncharacterized protein conserved in bacteria [Fun 93.32
cd0018376 TFIIS_I N-terminal domain (domain I) of transcript 93.23
PRK07251438 pyridine nucleotide-disulfide oxidoreductase; Prov 92.87
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 92.6
PRK04965377 NADH:flavorubredoxin oxidoreductase; Provisional 92.47
COG1249454 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, 92.32
PF02737180 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind 92.3
PRK05976472 dihydrolipoamide dehydrogenase; Validated 92.23
COG1252405 Ndh NADH dehydrogenase, FAD-containing subunit [En 92.18
KOG0404322 consensus Thioredoxin reductase [Posttranslational 91.9
TIGR01350461 lipoamide_DH dihydrolipoamide dehydrogenase. The m 91.87
PRK14989847 nitrite reductase subunit NirD; Provisional 91.86
TIGR02352337 thiamin_ThiO glycine oxidase ThiO. This family con 91.8
TIGR02053463 MerA mercuric reductase. This model represents the 91.66
PRK06292460 dihydrolipoamide dehydrogenase; Validated 91.66
PRK05249461 soluble pyridine nucleotide transhydrogenase; Prov 91.56
PRK06370463 mercuric reductase; Validated 91.54
TIGR01421450 gluta_reduc_1 glutathione-disulfide reductase, ani 91.52
PRK13512438 coenzyme A disulfide reductase; Provisional 91.49
smart0050975 TFS2N Domain in the N-terminus of transcription el 91.49
KOG0405478 consensus Pyridine nucleotide-disulphide oxidoredu 91.43
COG0029518 NadB Aspartate oxidase [Coenzyme metabolism] 91.37
PRK06416462 dihydrolipoamide dehydrogenase; Reviewed 91.31
COG0445621 GidA Flavin-dependent tRNA uridine 5-carboxymethyl 91.31
PRK06115466 dihydrolipoamide dehydrogenase; Reviewed 91.21
PRK06467471 dihydrolipoamide dehydrogenase; Reviewed 91.11
PRK06912458 acoL dihydrolipoamide dehydrogenase; Validated 91.09
PRK07846451 mycothione reductase; Reviewed 91.08
PF03721185 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen 91.06
PF02558151 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: 91.06
PRK14106450 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 90.87
TIGR02374785 nitri_red_nirB nitrite reductase [NAD(P)H], large 90.7
TIGR03385427 CoA_CoA_reduc CoA-disulfide reductase. Members of 90.65
PRK06129308 3-hydroxyacyl-CoA dehydrogenase; Validated 90.52
TIGR03452452 mycothione_red mycothione reductase. Mycothiol, a 90.51
PRK07818466 dihydrolipoamide dehydrogenase; Reviewed 90.44
KOG4716503 consensus Thioredoxin reductase [Posttranslational 90.43
PRK06327475 dihydrolipoamide dehydrogenase; Validated 90.38
COG5044434 MRS6 RAB proteins geranylgeranyltransferase compon 90.09
PRK07845466 flavoprotein disulfide reductase; Reviewed 89.73
PF01262168 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal 89.72
PRK08293287 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.37
PRK04148134 hypothetical protein; Provisional 89.33
TIGR02374785 nitri_red_nirB nitrite reductase [NAD(P)H], large 89.25
PRK09564444 coenzyme A disulfide reductase; Reviewed 89.25
PRK07066321 3-hydroxybutyryl-CoA dehydrogenase; Validated 89.15
TIGR03140515 AhpF alkyl hydroperoxide reductase, F subunit. Thi 89.11
PTZ00153659 lipoamide dehydrogenase; Provisional 89.05
COG0771448 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas 89.04
PRK09260288 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.97
PRK06249313 2-dehydropantoate 2-reductase; Provisional 88.93
PF13738203 Pyr_redox_3: Pyridine nucleotide-disulphide oxidor 88.89
PRK05708305 2-dehydropantoate 2-reductase; Provisional 88.73
PTZ00058561 glutathione reductase; Provisional 88.56
PRK07819286 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.55
PRK07530292 3-hydroxybutyryl-CoA dehydrogenase; Validated 88.41
COG0569225 TrkA K+ transport systems, NAD-binding component [ 88.41
PRK06522304 2-dehydropantoate 2-reductase; Reviewed 88.34
TIGR01316449 gltA glutamate synthase (NADPH), homotetrameric. T 88.21
TIGR01790388 carotene-cycl lycopene cyclase family protein. Thi 88.09
TIGR01424446 gluta_reduc_2 glutathione-disulfide reductase, pla 88.09
PRK06116450 glutathione reductase; Validated 88.09
PRK15317517 alkyl hydroperoxide reductase subunit F; Provision 87.98
PRK14989847 nitrite reductase subunit NirD; Provisional 87.95
PRK08229341 2-dehydropantoate 2-reductase; Provisional 87.89
PRK08010441 pyridine nucleotide-disulfide oxidoreductase; Prov 87.89
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 87.81
PRK12921305 2-dehydropantoate 2-reductase; Provisional 87.79
PRK10262321 thioredoxin reductase; Provisional 87.72
TIGR03143555 AhpF_homolog putative alkyl hydroperoxide reductas 87.72
PRK12831464 putative oxidoreductase; Provisional 87.66
PLN02507499 glutathione reductase 87.57
PRK13523337 NADPH dehydrogenase NamA; Provisional 87.42
PRK06035291 3-hydroxyacyl-CoA dehydrogenase; Validated 87.33
PLN02546558 glutathione reductase 87.25
PLN02463447 lycopene beta cyclase 86.85
TIGR01423486 trypano_reduc trypanothione-disulfide reductase. T 86.82
TIGR01470205 cysG_Nterm siroheme synthase, N-terminal domain. T 86.79
TIGR01292300 TRX_reduct thioredoxin-disulfide reductase. This m 86.65
PRK13748561 putative mercuric reductase; Provisional 86.55
KOG3855481 consensus Monooxygenase involved in coenzyme Q (ub 86.43
KOG3923342 consensus D-aspartate oxidase [Amino acid transpor 86.37
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 86.32
PRK11199374 tyrA bifunctional chorismate mutase/prephenate deh 86.26
PRK12770352 putative glutamate synthase subunit beta; Provisio 85.88
PRK14694468 putative mercuric reductase; Provisional 85.76
TIGR01763305 MalateDH_bact malate dehydrogenase, NAD-dependent. 85.67
PRK14618328 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 85.64
PRK04690468 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 85.57
COG1004414 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en 85.54
PRK05808282 3-hydroxybutyryl-CoA dehydrogenase; Validated 85.47
PF13241103 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ 85.4
cd01080168 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of 85.39
PRK01710458 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 85.35
PRK14727479 putative mercuric reductase; Provisional 85.34
PRK03369488 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 85.3
PRK09424509 pntA NAD(P) transhydrogenase subunit alpha; Provis 85.13
TIGR01438484 TGR thioredoxin and glutathione reductase selenopr 85.08
COG0686371 Ald Alanine dehydrogenase [Amino acid transport an 85.03
TIGR01816565 sdhA_forward succinate dehydrogenase, flavoprotein 85.02
PRK02472447 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 84.93
PTZ00052499 thioredoxin reductase; Provisional 84.8
PRK04308445 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 84.58
PRK00094325 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr 84.52
PRK06718202 precorrin-2 dehydrogenase; Reviewed 84.45
TIGR00518370 alaDH alanine dehydrogenase. The family of known L 84.42
PRK14619308 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 84.36
PRK11064415 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro 84.35
PRK06719157 precorrin-2 dehydrogenase; Validated 84.24
COG3634520 AhpF Alkyl hydroperoxide reductase, large subunit 84.2
PF13434341 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requi 84.12
PLN02545295 3-hydroxybutyryl-CoA dehydrogenase 84.01
PRK06130311 3-hydroxybutyryl-CoA dehydrogenase; Validated 83.92
cd05292308 LDH_2 A subgroup of L-lactate dehydrogenases. L-la 83.83
PRK14620326 NAD(P)H-dependent glycerol-3-phosphate dehydrogena 83.8
TIGR03026411 NDP-sugDHase nucleotide sugar dehydrogenase. All o 83.48
PRK08255765 salicylyl-CoA 5-hydroxylase; Reviewed 83.42
PRK01368454 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 83.27
PLN02411391 12-oxophytodienoate reductase 83.15
PTZ00318424 NADH dehydrogenase-like protein; Provisional 83.1
KOG2311679 consensus NAD/FAD-utilizing protein possibly invol 83.03
PRK11749457 dihydropyrimidine dehydrogenase subunit A; Provisi 82.98
PRK12778752 putative bifunctional 2-polyprenylphenol hydroxyla 82.68
cd02933338 OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind 82.59
PF00724341 Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox 82.43
TIGR02354200 thiF_fam2 thiamine biosynthesis protein ThiF, fami 82.39
cd00401413 AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado 82.2
TIGR02279503 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa 82.06
PF03446163 NAD_binding_2: NAD binding domain of 6-phosphogluc 82.0
PLN02927668 antheraxanthin epoxidase/zeaxanthin epoxidase 81.77
PRK00421461 murC UDP-N-acetylmuramate--L-alanine ligase; Provi 81.6
PRK08268507 3-hydroxy-acyl-CoA dehydrogenase; Validated 81.4
PRK08306296 dipicolinate synthase subunit A; Reviewed 81.29
KOG1238623 consensus Glucose dehydrogenase/choline dehydrogen 81.09
PRK07531495 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe 80.98
PRK00141473 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 80.31
KOG1335506 consensus Dihydrolipoamide dehydrogenase [Energy p 80.3
PRK02006498 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn 80.04
>PLN02976 amine oxidase Back     alignment and domain information
Probab=100.00  E-value=1.9e-207  Score=1962.10  Aligned_cols=1348  Identities=66%  Similarity=0.967  Sum_probs=1138.2

Q ss_pred             hhhhhhcccCCCCceeeeccCCCCCccceeEEEecccCcccccc--ccceeccCcccccccCCcCCCCchhhhhhhhccC
Q 046008           40 GEEKKCESKKRSKPVEIGFDSDDDEPIGSLFKLKKQRNPKKAKG--QKIEAREDKVTVEDDGLVGGMDDTLASFRKKLKG  117 (1624)
Q Consensus        40 e~~~k~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (1624)
                      ....|+++++..++|+||+|++|+|||+++|+|+++++++|+|+  .+...++++++.++++ ++||||||++|++++++
T Consensus         3 ~~~~~~~~~~~~k~i~~g~d~~ddepigs~~kl~~~~~~~k~k~~~~~~g~~~~~~~~~~~~-~~~mddtla~~~kr~~~   81 (1713)
T PLN02976          3 DKERKSGSKRGLKVIQIGDDSDDDEPIGSLFKLKRPKNSKKVKVGLESTGKREEKLSALDED-SEGMDDTLASFRKRLKG   81 (1713)
T ss_pred             cccccccccccCCceecccccccccccccceeeecccccccceecccccccccccccccccc-ccccchhHHHHHHhccC
Confidence            34578888888999999999999999999999999999999998  7779999999998888 99999999999999999


Q ss_pred             CCCCCCCCcccCCCCCCCCCCCccccccccccccccccccccccCCCCCChhhhHHhhhhhhhhccccCccccccCCccc
Q 046008          118 PKKDAGSGVLNGRGSALNGSLDDDWVLDVKLAPKHDEKVGVSCEDGSGVTLDKWVETKCKERVKRSKIDSKMTIIGNHVV  197 (1624)
Q Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~  197 (1624)
                      +|+..+++.      +..  -....+.|-                 ..+  +.+.                         
T Consensus        82 ~~k~v~~~~------~~~--s~~~~~~d~-----------------~e~--~~~~-------------------------  109 (1713)
T PLN02976         82 PKKGVGSVS------ARM--SQGALLENQ-----------------EEV--DTVL-------------------------  109 (1713)
T ss_pred             ccccccchh------ccc--ccccccccc-----------------chh--cccc-------------------------
Confidence            999999771      111  000001110                 000  0000                         


Q ss_pred             ccCCCCccccccccccc-hhhhhhhhhhhcCCCCcccccccccCccccccccccccCCCCCCCCCcc-cccccc------
Q 046008          198 CDDDSKCLCCRGDSLED-QKEEELSTFFQRTPSGLLRKSRTNSGSKQNIKEWSLRDGSIPSSEGDSK-SLMRSQ------  269 (1624)
Q Consensus       198 ~~~~s~~s~~~~~~i~k-~~~~~l~~~f~~~~~~~l~~s~~~~s~~~~~~~~~l~~~~~~~~~~~~~-d~~R~~------  269 (1624)
                       .+.++       .+++ .+|..++++++.+|.|+.++++++++++++++...|...+++.+..... ..+|..      
T Consensus       110 -~~gs~-------~s~d~~~e~~~~~~~~~~~a~~~~~s~~~~~~~~~~r~~~~ea~~~~~~~~~~~~~~~~~~~~~~~~  181 (1713)
T PLN02976        110 -NEGSK-------RSLDGNLEDSLSAFLREAQAGLSRKSCANSCGKQLNRVQGLEAGLSPGSEKVKTVSNEREGNGFHQI  181 (1713)
T ss_pred             -ccCcc-------cccccchHHHHHHHHHHhhcccccCccccccccccccccccccccCCCcccccchhccccccccccc
Confidence             00111       1223 5666789999999999999999999999999999999999987754321 112221      


Q ss_pred             ---cccc-------cccccCCCCCCCCcccccccccccccccccccCCCccccccccccCCCCCCccccCCCCccccCCC
Q 046008          270 ---SVSA-------SKLSRKDPKSDDNSNTVSNLRTLELDSDQCKKVGPMLETYHSNVQDPCSSNKVCDSDGKAHTCLPV  339 (1624)
Q Consensus       270 ---s~s~-------~~l~~~~~k~~~~~~~~s~~~~~~lk~~k~~~~~~~~~~~~e~~~~~~ss~~~~~~~~~~~~~~~~  339 (1624)
                         .+.+       +--..-++++.+.++..|+.+-+..-      .+++..++.||+++|+.+..|.+.-|+  ||..+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~g~s~~~~~p~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  253 (1713)
T PLN02976        182 SYHTEEAEDGISEVAATKDRVSKSSDDRHGESSEVNHPAL------ESHSGVIEDENMVDPSIAPTQEEPLGE--PCSED  253 (1713)
T ss_pred             cccccccccccccccccccccccccccccCccccccCccc------cccccccccccccCCccccccccccCC--cCccc
Confidence               0111       11122333555657776665533322      467778888999999999999888887  66666


Q ss_pred             ccccccccccccccccccccccccccccccceeeccccCCCCCccccccccccccCCcccccccccccCccccccccCCC
Q 046008          340 GHASASGQKARSDTQTLDELKLSSMEKASTLILDVVEVPDPASCSKAMEEFHEFDGESDRGFTDALDLQSNSISAMNVSS  419 (1624)
Q Consensus       340 ~~~~~s~~~~~~~~~~~~~~k~~~~~~~~~~~~~~v~~~~~~~~~t~~~~~~~~~~e~~~~l~~~~~~~~~~~~~~~~s~  419 (1624)
                      .++.            -++++.|++++...                             ..+.....++|..+.++|+++
T Consensus       254 ~~~~------------~~~l~~cs~g~~~~-----------------------------~~~~~~~~~~~~~v~~kc~~~  292 (1713)
T PLN02976        254 RICD------------KKGLVLCSCGKQPT-----------------------------FEIKSALSQQSKGVSTKCISS  292 (1713)
T ss_pred             cccc------------cccccccccCCCCC-----------------------------ccccchhhccccccccchhcc
Confidence            6544            24778999877652                             222344557788888999999


Q ss_pred             CCCCCCCCCCCccccCCCCCchhhhhcccccccccccccccchhccccccccccCCCccccccccccCCCCCC-CCC-CC
Q 046008          420 PDPEISSSSTGKEVSLPCAEDELASKSCKTASKQIHVSASEKILQATSKLLTQKSLGAEKSESWFNFDQCPAD-SSN-KE  497 (1624)
Q Consensus       420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~K~~~~~~s~~~s~~~s~~~~~kss~~~~~~s~~~~~~~~~~-~~~-s~  497 (1624)
                      ..++++.++..+.+++.                                       .+|++.-.|-|++--.+ ... ..
T Consensus       293 ~~~~~~~~~~~k~~~~~---------------------------------------~~~~~~~~~~~~~n~~~~~~~~~~  333 (1713)
T PLN02976        293 AEQQASVSSDNKETSST---------------------------------------EVHKANFTMQMNHNGGSLEVNTLE  333 (1713)
T ss_pred             ccccccccccccccccc---------------------------------------chhcccceeeeccCCCCccccCCC
Confidence            99998887666554421                                       11222111111111111 000 00


Q ss_pred             CC----CCCCccccCCCCCCCCCCCCCCCCccCcCCCCCccccccchhHHHHHhhhhhhhccCCCcccCCcchhHHhhhc
Q 046008          498 NA----IPSDDEYANGGSPSSVAPDENGSFTEDTLSMPDYENRDTKLSAVQRAVRNAKKRRLGDMAYEGDADWEVLINEQ  573 (1624)
Q Consensus       498 ~s----~~sk~~~~~~~s~~S~~~~~~~~~~~d~~s~s~~~~~~~~~s~~~rk~rk~k~r~~~d~~~e~d~~~e~~~~~~  573 (1624)
                      ++    .+-.+..-+|.|+.|++|++|..+.+|+.+.+++++..++.++.+|..|++|||+||||+||||+|||+||++|
T Consensus       334 ~~~~~~~~~~~~~~~ga~~~s~~p~~~e~~~~davs~pd~e~~~~~~s~~~R~~r~~kk~~~~d~~~egd~~w~~l~~~~  413 (1713)
T PLN02976        334 DSPSHDIVGSHPVCNGASPVSITPEENESYVEDAVSLPDSEIKDGKLSKLQRVTRKAKKRKLGDMAYEGDADWETLINEQ  413 (1713)
T ss_pred             cCccccccccCccccccCcccCCCccccccccccccCCCchhhcccchhhcccccccccccccccccccCccHHHHhccc
Confidence            00    01122356889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccccchhhhhccccccCCCCCccccccccccccceeccCcccccCchhhcchhHHHhcCCCccchhhhhhHHHHhh
Q 046008          574 GFLENHQVMDYEQALRTRDKFDSSSTTLTEAENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGLQEYLECRNQILSLW  653 (1624)
Q Consensus       574 ~~~~~~~~~~~d~~~~~r~k~d~~~~~~~~~~~~~~aa~~~~l~~~~~~~~e~~~~~~~~~~~~~~~~~l~~rn~~l~~w  653 (1624)
                      +||.++++.+.|+++++|+|+|+++ .+++++++++|||++||||+++||+|+|||+|||||+|||||||+|||+||+||
T Consensus       414 ~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~aav~~gl~a~~~~~~e~~~~k~~lkr~~~~q~yl~cr~~~l~~w  492 (1713)
T PLN02976        414 GFLENPSACDSDRSFKTRDKSDSSS-VSKEGENGGAAAVSAGLKARAVGPIEKIKFKEVLKRKGGLQEYLECRNMILGLW  492 (1713)
T ss_pred             ccccccccccccccccccccccccc-ccccccCccHhhhhccccccccChHHHHHHHHHHHhccchHHHHHHHHHHHHHh
Confidence            9999999999999999999999999 567899999999999999999999999999999999999999999999999999


Q ss_pred             cCCCccCCcccccCCCCCCCCCCCChhhHHHHHHHhhcccCceeeecCCCCcccCCCCcchhhHHhhhhhccccCCcccc
Q 046008          654 SGDVGRILPLTECGVSDTPLGDEPSRASLIREIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIAD  733 (1624)
Q Consensus       654 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~g~in~g~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (1624)
                      .||++++||+++|++.++|+.+|+|+++|||+||.||||+||||.||++.|+++++.++|+|+++++++|||++++++||
T Consensus       493 ~k~~~~~l~~~~c~v~~~~~~~e~~~~~l~r~~~~fld~~gyin~g~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  572 (1713)
T PLN02976        493 SKDVSRILPLADCGVTDTPSEDESPRASLIREVYLFLDQRGYINAGIASEKEKAEPSTNHNYKLVEEKTLEESSGASVAD  572 (1713)
T ss_pred             hhhhhhcccHhhccccCCcccccCchhhHHHHHHHHhhccCceecccccccccCCCCCCcchhhhhccccccCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccceeeeecccccccccccccCccccCCCCcccccccCCCCCCCCCchhhhhhhhhhhhccccCCCccccccccccccc
Q 046008          734 SEDGVAFILGQIKSSETTTEAKHGVECNDGNQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVS  813 (1624)
Q Consensus       734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~  813 (1624)
                      +||||+||+||++..+++.|+++|+..++.++...         ++.+...|.++.+..+++.........|.....|+.
T Consensus       573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  643 (1713)
T PLN02976        573 SEDGVSFILGQVKSSESSTEGKDCVLVDDENDASG---------DLPNVCECSELLASDIQQCGASNEKLNNGLVSLDAL  643 (1713)
T ss_pred             cccchhhhhhcccccccccccccccccccchhhhc---------cccccccHhhhcccchhhcchhhhhhhccccchhhh
Confidence            99999999999999999999999999988876655         456667788888888888777777788888888888


Q ss_pred             cCCCCccccccCCC-cC-ChhcccccchhhhhhhhhcCCCCccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEc
Q 046008          814 CDDPSCGMVDGGTV-PL-TIEERSESERVQSASCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLE  891 (1624)
Q Consensus       814 ~~~~~c~~v~~~r~-~l-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE  891 (1624)
                      ...+.|.+....+. .+ .|+..+.+.-..++.|++++..+..+.+....++|+|||||++||+||++|+++|++|+|||
T Consensus       644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dV~IIGAG~AGLaAA~~L~~~G~~V~VlE  723 (1713)
T PLN02976        644 SASPSSSVLDSPETLSVIKPELRNELQSVQSNSCIEMGGNHCVLCDSVDRKKIIVVGAGPAGLTAARHLQRQGFSVTVLE  723 (1713)
T ss_pred             ccCCccccccCcccccccchhhhcccccchhhhHHhcCCCCCccCCcCCCCcEEEECchHHHHHHHHHHHHCCCcEEEEe
Confidence            77788887777644 34 99999999999999999999888888888888999999999999999999999999999999


Q ss_pred             ccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHHhCCceeeecCCCCeeeccCCcccCcchHHHH
Q 046008          892 ARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEAL  971 (1624)
Q Consensus       892 ~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~LlkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l  971 (1624)
                      +++++||++++.....|+++|+|++|+++...+....+.++|+..|+.++|+.+..+...++.|+..+|..++......+
T Consensus       724 a~~~vGGri~t~~~~~g~pvDlGas~i~G~~~nv~~~r~~np~~~la~qlGl~l~~~~~~~~~yd~~~G~~V~~e~~~~v  803 (1713)
T PLN02976        724 ARSRIGGRVYTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDVVTGEKVPADLDEAL  803 (1713)
T ss_pred             eccCCCCceeeccccCCceeccCcEEEecccccccccccccHHHHHHHhcCCccccccCCCceeEccCCcCCCHHHHHHH
Confidence            99999999999876568999999999999887777777789999999999999887777788898889999999988888


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHhhccCCcccccccchhh-Hhhc-ccCCCCCCCCcccchhc
Q 046008          972 EAEFNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMD-VYSK-TSSVDSRVPDKDCSRED 1049 (1624)
Q Consensus       972 ~~~~~slld~l~~~~~~~g~~a~~~sled~Le~~lk~~r~~~~~~~~~~~~~~~a~d-~fs~-~~~i~~~~p~~d~l~e~ 1049 (1624)
                      ...|+.+++.+.....+.+.....+++.++|++.+...........++......+.+ .+.. ...+.....++ .....
T Consensus       804 ~~~fn~lld~~~~~~~~~g~~a~d~SLgd~Le~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~G~~~er-~s~~~  882 (1713)
T PLN02976        804 EAEYNSLLDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMPRPGVDIDETELGNAADDLYDSASTGVDGGHCEK-ESKED  882 (1713)
T ss_pred             HHHHHHHHHHHHHHHhhcccCccCCCHHHHHHHHHhhhhccccccccchhhcccchhhhhhhhhhcccccchhh-hhHHH
Confidence            899999988876655554445557889999987664432211111111111111111 1110 01122222222 34567


Q ss_pred             cCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCCccccccchHHHHHHHHhhhccccccceEEEEEecCC
Q 046008         1050 ILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALGKELLIHHNHVVTDISYSFK 1129 (1624)
Q Consensus      1050 ~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~G~~~~VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~ 1129 (1624)
                      ++++..+++|+|++..++++++..+..+|+.+|.++..|..++|.++++.|||++|+++|++.+.|+||++|++|.+...
T Consensus       883 ~Ls~~er~lL~w~~~~lE~~~aa~L~eVSl~~~~qd~~y~~fgG~~~rIkGGYqqLIeALAe~L~IrLNtpVtrId~s~~  962 (1713)
T PLN02976        883 VLSPLERRVMNWHFAHLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSNVVESLAEGLDIHLNHVVTDVSYGSK  962 (1713)
T ss_pred             hhCHHHHHHHHHHHHhhcccccCCHHHhhhhhhhcccccccCCCceEEeCCCHHHHHHHHHhhCCeecCCeEEEEEecCC
Confidence            88999999999999999899999999999999998878888889999999999999999999999999999999998411


Q ss_pred             CCCCC-CCCCcEEEEeCCCcEEEcCEEEEccChhhhhhhcccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCc
Q 046008         1130 DSDLS-DGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVD 1208 (1624)
Q Consensus      1130 ~~~~s-~~~~~V~V~TadGeti~AD~VIsAiP~~vLk~~~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~ 1208 (1624)
                      +.+.. ..+++|.|+|.+|++|.||+||+|+|+++|+...|.|.|+||.+++++|++++||.++||+|.|+++||+....
T Consensus       963 d~~~~~s~~dGVtVtTsDGetftADaVIVTVPLGVLKag~I~FsPPLPe~KqaAIqrLgfG~lnKV~LeFdrpFW~~d~d 1042 (1713)
T PLN02976        963 DAGASGSSRKKVKVSTSNGSEFLGDAVLITVPLGCLKAETIKFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWDDSVD 1042 (1713)
T ss_pred             cccccccCCCcEEEEECCCCEEEeceEEEeCCHHHhhhcccccCCcccHHHHHHHHhhccccceEEEEEeCCccccCCCC
Confidence            10000 12467999999999999999999999999987779999999999999999999999999999999999998888


Q ss_pred             cccccccccCCCCceeEEeccccCCCCcEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCC
Q 046008         1209 YFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGR 1288 (1624)
Q Consensus      1209 ~fG~~~~~~~~rg~~~~~~n~~ap~G~~vLvayv~G~~A~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~ 1288 (1624)
                      +||........++.+|++|+...+.+.++|++|++|..+..+..++++++++.++..|+++||...+|+|..+++++|..
T Consensus      1043 ~FG~s~edtdlrG~~~~~wnlr~psG~pVLVafv~G~aAreiEsLSDEE~Ve~ALe~LrKlFG~~~iPdPv~~vvTrWss 1122 (1713)
T PLN02976       1043 YFGATAEETDLRGQCFMFWNVKKTVGAPVLIALVVGKAAIDGQSMSSSDHVNHALMVLRKLFGEALVPDPVASVVTDWGR 1122 (1713)
T ss_pred             ccccccccCCCCceEEEeccCCCCCCCCEEEEEeccHhHHHHhhCCHHHHHHHHHHHHHHHcCcccccCcceeEEecCCC
Confidence            89877655556778889998877778889999999999999999999999999999999999977678999999999999


Q ss_pred             CCCCcccccccCCCCCCchhhhhCCccCCeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHccCCCCchhHHHHHHh
Q 046008         1289 DPFSYGAYSYVATGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTTGNDFTAEVEAMEAA 1368 (1624)
Q Consensus      1289 dp~s~GsYs~~~pG~~~~~~d~L~tPV~grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~~~~~~~~~~~l~~~ 1368 (1624)
                      +||++|+|+|++||+.+.+++.+++|++++||||||+|+..|+|||+||+.||+|||.+|+..|+.|.++..++++|+++
T Consensus      1123 DPySrGSYSy~~PGs~~~d~d~LAePVggRLFFAGEATS~~~pGTVHGAIeSG~RAA~eIL~~L~~G~~~~~~~~~~~~~ 1202 (1713)
T PLN02976       1123 DPFSYGAYSYVAIGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDILNTGNDYTAEVEALETA 1202 (1713)
T ss_pred             CCCcCccccCCCCCCCchHHHHHhCCCCCcEEEEehhhhCCCcchHHHHHHHHHHHHHHHHHHHHccCccccHHHHHHHh
Confidence            99999999999999998899999999998999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCcchhhhhhhhHhHhhhhhhhhcccchhhhhHhHHHHHHHHHhhccccchhHHHHHHhcCCChhhccccccccc
Q 046008         1369 QMQSESEGDEVRDITRRLEAVELSNVLYKNSLDRALILTRESLLQDMFFNAKTTAGRLHLAKELLNLPVATLKSFAGTRE 1448 (1624)
Q Consensus      1369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 1448 (1624)
                      |+++++||+||+|+++|++++|++++||+++++++++++||+||++||++++||+||||||++|++||+++||+|||+||
T Consensus      1203 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gr~~~~~~~~~~~~~~~~~~a~~~~ 1282 (1713)
T PLN02976       1203 QRHSESERDEVRDITKRLEAVELSNVLYKNSLDADPILTREALLQEMFFSAKTTAGRLHLAKELLNLPVETLKSFAGTKE 1282 (1713)
T ss_pred             hhhhhhhHHHHHHHHHhhcccccchhhhhcccccccchhHHHHHHHHHHhhcccccHHHHHHHHHhCCHHHHHHHhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhhhhccCCchhHHHHHHHHhhhhhcchhhHHHhccccccccccccccCchhHHHHHHHHHHHHHHHHHHHhhh
Q 046008         1449 GLTTLNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVSVWLEVFRKEKAS 1528 (1624)
Q Consensus      1449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1528 (1624)
                      ||++||+||||||||||||||||||||||+|+|||+|||+||||||||||||+||+||||+|||||||+|+|+|||+||+
T Consensus      1283 gl~~l~~w~~~~~~~~~~~l~~~~~~ll~~~~~d~~a~r~sg~~~~~k~~~~~h~~~~~r~~a~~~~~~w~~~~~~~~~~ 1362 (1713)
T PLN02976       1283 GLATLNSWILDSMGKDGTQLLRHCVRLLVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRREKAS 1362 (1713)
T ss_pred             hHHHHHHHHHHHhcccHHHHHHHHHHHHhhcchhHHHHHhccchHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             h-hhhhhccccccccccccc
Q 046008         1529 S-RLKLLKQSTAVDSIKRKS 1547 (1624)
Q Consensus      1529 ~-~~~~~~~~~~~~~~~~~~ 1547 (1624)
                      | |+||+|++++.+++|+.-
T Consensus      1363 ~~~~~~~~~~~~~~~~~~~~ 1382 (1713)
T PLN02976       1363 NGGLKLLRQATANESSKRRK 1382 (1713)
T ss_pred             ccchhhhhhccccccccccc
Confidence            8 999999999999999843



>PLN03000 amine oxidase Back     alignment and domain information
>PLN02328 lysine-specific histone demethylase 1 homolog Back     alignment and domain information
>PLN02529 lysine-specific histone demethylase 1 Back     alignment and domain information
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02268 probable polyamine oxidase Back     alignment and domain information
>PLN02568 polyamine oxidase Back     alignment and domain information
>PLN02676 polyamine oxidase Back     alignment and domain information
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG1231 Monoamine oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO) Back     alignment and domain information
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase Back     alignment and domain information
>PRK12416 protoporphyrinogen oxidase; Provisional Back     alignment and domain information
>PLN02576 protoporphyrinogen oxidase Back     alignment and domain information
>PRK07233 hypothetical protein; Provisional Back     alignment and domain information
>PLN02612 phytoene desaturase Back     alignment and domain information
>PRK11883 protoporphyrinogen oxidase; Reviewed Back     alignment and domain information
>TIGR02731 phytoene_desat phytoene desaturase Back     alignment and domain information
>PRK07208 hypothetical protein; Provisional Back     alignment and domain information
>TIGR03467 HpnE squalene-associated FAD-dependent desaturase Back     alignment and domain information
>PLN02487 zeta-carotene desaturase Back     alignment and domain information
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD Back     alignment and domain information
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase Back     alignment and domain information
>TIGR02734 crtI_fam phytoene desaturase Back     alignment and domain information
>TIGR02730 carot_isom carotene isomerase Back     alignment and domain information
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>COG3349 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only] Back     alignment and domain information
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase Back     alignment and domain information
>PTZ00363 rab-GDP dissociation inhibitor; Provisional Back     alignment and domain information
>COG2081 Predicted flavoproteins [General function prediction only] Back     alignment and domain information
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G Back     alignment and domain information
>PF04433 SWIRM: SWIRM domain; InterPro: IPR007526 The SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in eukaryotic chromosomal proteins Back     alignment and domain information
>PRK13977 myosin-cross-reactive antigen; Provisional Back     alignment and domain information
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1 Back     alignment and domain information
>PRK10015 oxidoreductase; Provisional Back     alignment and domain information
>PRK10157 putative oxidoreductase FixC; Provisional Back     alignment and domain information
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family Back     alignment and domain information
>PRK09126 hypothetical protein; Provisional Back     alignment and domain information
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion] Back     alignment and domain information
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated Back     alignment and domain information
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] Back     alignment and domain information
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>TIGR02023 BchP-ChlP geranylgeranyl reductase Back     alignment and domain information
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase Back     alignment and domain information
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional Back     alignment and domain information
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional Back     alignment and domain information
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional Back     alignment and domain information
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial Back     alignment and domain information
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated Back     alignment and domain information
>PRK07588 hypothetical protein; Provisional Back     alignment and domain information
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed Back     alignment and domain information
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated Back     alignment and domain information
>TIGR02032 GG-red-SF geranylgeranyl reductase family Back     alignment and domain information
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed Back     alignment and domain information
>PRK11259 solA N-methyltryptophan oxidase; Provisional Back     alignment and domain information
>PRK06185 hypothetical protein; Provisional Back     alignment and domain information
>PRK07236 hypothetical protein; Provisional Back     alignment and domain information
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional Back     alignment and domain information
>PRK08013 oxidoreductase; Provisional Back     alignment and domain information
>PRK07045 putative monooxygenase; Reviewed Back     alignment and domain information
>PLN00093 geranylgeranyl diphosphate reductase; Provisional Back     alignment and domain information
>TIGR02028 ChlP geranylgeranyl reductase Back     alignment and domain information
>PRK06184 hypothetical protein; Provisional Back     alignment and domain information
>PRK00711 D-amino acid dehydrogenase small subunit; Validated Back     alignment and domain information
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion] Back     alignment and domain information
>PRK11728 hydroxyglutarate oxidase; Provisional Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase Back     alignment and domain information
>COG0579 Predicted dehydrogenase [General function prediction only] Back     alignment and domain information
>PRK06753 hypothetical protein; Provisional Back     alignment and domain information
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06834 hypothetical protein; Provisional Back     alignment and domain information
>PRK06847 hypothetical protein; Provisional Back     alignment and domain information
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK05868 hypothetical protein; Validated Back     alignment and domain information
>PRK12810 gltD glutamate synthase subunit beta; Reviewed Back     alignment and domain information
>PRK07538 hypothetical protein; Provisional Back     alignment and domain information
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed Back     alignment and domain information
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional Back     alignment and domain information
>COG0493 GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated Back     alignment and domain information
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form Back     alignment and domain information
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated Back     alignment and domain information
>PRK08244 hypothetical protein; Provisional Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PRK08132 FAD-dependent oxidoreductase; Provisional Back     alignment and domain information
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated Back     alignment and domain information
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins Back     alignment and domain information
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form Back     alignment and domain information
>PRK07190 hypothetical protein; Provisional Back     alignment and domain information
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K Back     alignment and domain information
>PRK06126 hypothetical protein; Provisional Back     alignment and domain information
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>TIGR01317 GOGAT_sm_gam glutamate synthases, NADH/NADPH, small subunit Back     alignment and domain information
>PLN02697 lycopene epsilon cyclase Back     alignment and domain information
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR01789 lycopene_cycl lycopene cyclase Back     alignment and domain information
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional Back     alignment and domain information
>TIGR03219 salicylate_mono salicylate 1-monooxygenase Back     alignment and domain information
>PRK06996 hypothetical protein; Provisional Back     alignment and domain information
>PTZ00383 malate:quinone oxidoreductase; Provisional Back     alignment and domain information
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6 Back     alignment and domain information
>PLN02464 glycerol-3-phosphate dehydrogenase Back     alignment and domain information
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364 Back     alignment and domain information
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PLN02852 ferredoxin-NADP+ reductase Back     alignment and domain information
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR00136 gidA glucose-inhibited division protein A Back     alignment and domain information
>TIGR00275 flavoprotein, HI0933 family Back     alignment and domain information
>PRK09231 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PLN02172 flavin-containing monooxygenase FMO GS-OX Back     alignment and domain information
>PRK13339 malate:quinone oxidoreductase; Reviewed Back     alignment and domain information
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase Back     alignment and domain information
>PRK08205 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK05257 malate:quinone oxidoreductase; Validated Back     alignment and domain information
>PRK13984 putative oxidoreductase; Provisional Back     alignment and domain information
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK09897 hypothetical protein; Provisional Back     alignment and domain information
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional Back     alignment and domain information
>TIGR00292 thiazole biosynthesis enzyme Back     alignment and domain information
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PTZ00188 adrenodoxin reductase; Provisional Back     alignment and domain information
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function Back     alignment and domain information
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [] Back     alignment and domain information
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways Back     alignment and domain information
>COG2509 Uncharacterized FAD-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes [] Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PLN02661 Putative thiazole synthesis Back     alignment and domain information
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>PF12831 FAD_oxidored: FAD dependent oxidoreductase; PDB: 3ADA_A 1VRQ_A 1X31_A 3AD9_A 3AD8_A 3AD7_A 2GAG_A 2GAH_A Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PF07156 Prenylcys_lyase: Prenylcysteine lyase; InterPro: IPR010795 This entry represents a conserved region found in a group of prenylcysteine lyases (1 Back     alignment and domain information
>PF13454 NAD_binding_9: FAD-NAD(P)-binding Back     alignment and domain information
>PRK08163 salicylate hydroxylase; Provisional Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06475 salicylate hydroxylase; Provisional Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>COG0492 TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02360 pbenz_hydroxyl 4-hydroxybenzoate 3-monooxygenase Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family Back     alignment and domain information
>TIGR01372 soxA sarcosine oxidase, alpha subunit family, heterotetrameric form Back     alignment and domain information
>KOG2614 consensus Kynurenine 3-monooxygenase and related flavoprotein monooxygenases [Energy production and conversion; General function prediction only] Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ Back     alignment and domain information
>TIGR01813 flavo_cyto_c flavocytochrome c Back     alignment and domain information
>PRK11445 putative oxidoreductase; Provisional Back     alignment and domain information
>PRK06481 fumarate reductase flavoprotein subunit; Validated Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>PRK08274 tricarballylate dehydrogenase; Validated Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK07121 hypothetical protein; Validated Back     alignment and domain information
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional Back     alignment and domain information
>PLN02985 squalene monooxygenase Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>PRK12842 putative succinate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02463 lycopene beta cyclase Back     alignment and domain information
>PF07992 Pyr_redox_2: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR023753 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>TIGR00137 gid_trmFO tRNA:m(5)U-54 methyltransferase Back     alignment and domain information
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated Back     alignment and domain information
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] Back     alignment and domain information
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion] Back     alignment and domain information
>PTZ00367 squalene epoxidase; Provisional Back     alignment and domain information
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK12834 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK08294 phenol 2-monooxygenase; Provisional Back     alignment and domain information
>PRK12839 hypothetical protein; Provisional Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>KOG2844 consensus Dimethylglycine dehydrogenase precursor [Amino acid transport and metabolism] Back     alignment and domain information
>COG4716 Myosin-crossreactive antigen [Function unknown] Back     alignment and domain information
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>KOG1800 consensus Ferredoxin/adrenodoxin reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup Back     alignment and domain information
>TIGR03197 MnmC_Cterm tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain Back     alignment and domain information
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>PRK08641 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR02462 pyranose_ox pyranose oxidase Back     alignment and domain information
>PRK07804 L-aspartate oxidase; Provisional Back     alignment and domain information
>PF00732 GMC_oxred_N: GMC oxidoreductase; InterPro: IPR000172 The glucose-methanol-choline (GMC) oxidoreductases are FAD flavoproteins oxidoreductases [, ] Back     alignment and domain information
>COG3573 Predicted oxidoreductase [General function prediction only] Back     alignment and domain information
>PRK06134 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PRK08401 L-aspartate oxidase; Provisional Back     alignment and domain information
>KOG1439 consensus RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed Back     alignment and domain information
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional Back     alignment and domain information
>PRK12843 putative FAD-binding dehydrogenase; Reviewed Back     alignment and domain information
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit Back     alignment and domain information
>PRK06175 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed Back     alignment and domain information
>TIGR00551 nadB L-aspartate oxidase Back     alignment and domain information
>PRK07395 L-aspartate oxidase; Provisional Back     alignment and domain information
>PLN02815 L-aspartate oxidase Back     alignment and domain information
>PF08711 Med26: TFIIS helical bundle-like domain; InterPro: IPR017923 Transcription factor IIS (TFIIS) is a transcription elongation factor that increases the overall transcription rate of RNA polymerase II by reactivating transcription elongation complexes that have arrested transcription Back     alignment and domain information
>PTZ00306 NADH-dependent fumarate reductase; Provisional Back     alignment and domain information
>PRK06854 adenylylsulfate reductase subunit alpha; Validated Back     alignment and domain information
>PRK08626 fumarate reductase flavoprotein subunit; Provisional Back     alignment and domain information
>TIGR01811 sdhA_Bsu succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup Back     alignment and domain information
>PRK08275 putative oxidoreductase; Provisional Back     alignment and domain information
>COG3075 GlpB Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated Back     alignment and domain information
>PRK08071 L-aspartate oxidase; Provisional Back     alignment and domain information
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>KOG2852 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>KOG1298 consensus Squalene monooxygenase [Lipid transport and metabolism] Back     alignment and domain information
>PRK09077 L-aspartate oxidase; Provisional Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>PRK02106 choline dehydrogenase; Validated Back     alignment and domain information
>TIGR02061 aprA adenosine phosphosulphate reductase, alpha subunit Back     alignment and domain information
>COG0446 HcaD Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only] Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>COG1053 SdhA Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion] Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>KOG2960 consensus Protein involved in thiamine biosynthesis and DNA damage tolerance [General function prediction only] Back     alignment and domain information
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK07512 L-aspartate oxidase; Provisional Back     alignment and domain information
>COG1206 Gid NAD(FAD)-utilizing enzyme possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>TIGR01810 betA choline dehydrogenase Back     alignment and domain information
>PF04820 Trp_halogenase: Tryptophan halogenase; InterPro: IPR006905 Tryptophan halogenase catalyses the chlorination of tryptophan to form 7-chlorotryptophan Back     alignment and domain information
>TIGR03378 glycerol3P_GlpB glycerol-3-phosphate dehydrogenase, anaerobic, B subunit Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>COG5259 RSC8 RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription] Back     alignment and domain information
>KOG1279 consensus Chromatin remodeling factor subunit and related transcription factors [Chromatin structure and dynamics] Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG2303 BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2665 consensus Predicted FAD-dependent oxidoreductase [Function unknown] Back     alignment and domain information
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate Back     alignment and domain information
>KOG2853 consensus Possible oxidoreductase [General function prediction only] Back     alignment and domain information
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>PRK09754 phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional Back     alignment and domain information
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PLN02785 Protein HOTHEAD Back     alignment and domain information
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein Back     alignment and domain information
>COG4529 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd00183 TFIIS_I N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme Back     alignment and domain information
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>PRK04965 NADH:flavorubredoxin oxidoreductase; Provisional Back     alignment and domain information
>COG1249 Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] Back     alignment and domain information
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 Back     alignment and domain information
>PRK05976 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] Back     alignment and domain information
>KOG0404 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>TIGR02352 thiamin_ThiO glycine oxidase ThiO Back     alignment and domain information
>TIGR02053 MerA mercuric reductase Back     alignment and domain information
>PRK06292 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional Back     alignment and domain information
>PRK06370 mercuric reductase; Validated Back     alignment and domain information
>TIGR01421 gluta_reduc_1 glutathione-disulfide reductase, animal/bacterial Back     alignment and domain information
>PRK13512 coenzyme A disulfide reductase; Provisional Back     alignment and domain information
>smart00509 TFS2N Domain in the N-terminus of transcription elongation factor S-II (and elsewhere) Back     alignment and domain information
>KOG0405 consensus Pyridine nucleotide-disulphide oxidoreductase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG0029 NadB Aspartate oxidase [Coenzyme metabolism] Back     alignment and domain information
>PRK06416 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>COG0445 GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>PRK06912 acoL dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>PRK07846 mycothione reductase; Reviewed Back     alignment and domain information
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] Back     alignment and domain information
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 Back     alignment and domain information
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>TIGR03385 CoA_CoA_reduc CoA-disulfide reductase Back     alignment and domain information
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR03452 mycothione_red mycothione reductase Back     alignment and domain information
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed Back     alignment and domain information
>KOG4716 consensus Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK06327 dihydrolipoamide dehydrogenase; Validated Back     alignment and domain information
>COG5044 MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK07845 flavoprotein disulfide reductase; Reviewed Back     alignment and domain information
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 Back     alignment and domain information
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK04148 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02374 nitri_red_nirB nitrite reductase [NAD(P)H], large subunit Back     alignment and domain information
>PRK09564 coenzyme A disulfide reductase; Reviewed Back     alignment and domain information
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit Back     alignment and domain information
>PTZ00153 lipoamide dehydrogenase; Provisional Back     alignment and domain information
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK06249 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A Back     alignment and domain information
>PRK05708 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PTZ00058 glutathione reductase; Provisional Back     alignment and domain information
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06522 2-dehydropantoate 2-reductase; Reviewed Back     alignment and domain information
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric Back     alignment and domain information
>TIGR01790 carotene-cycl lycopene cyclase family protein Back     alignment and domain information
>TIGR01424 gluta_reduc_2 glutathione-disulfide reductase, plant Back     alignment and domain information
>PRK06116 glutathione reductase; Validated Back     alignment and domain information
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional Back     alignment and domain information
>PRK14989 nitrite reductase subunit NirD; Provisional Back     alignment and domain information
>PRK08229 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PRK12921 2-dehydropantoate 2-reductase; Provisional Back     alignment and domain information
>PRK10262 thioredoxin reductase; Provisional Back     alignment and domain information
>TIGR03143 AhpF_homolog putative alkyl hydroperoxide reductase F subunit Back     alignment and domain information
>PRK12831 putative oxidoreductase; Provisional Back     alignment and domain information
>PLN02507 glutathione reductase Back     alignment and domain information
>PRK13523 NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PLN02546 glutathione reductase Back     alignment and domain information
>PLN02463 lycopene beta cyclase Back     alignment and domain information
>TIGR01423 trypano_reduc trypanothione-disulfide reductase Back     alignment and domain information
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain Back     alignment and domain information
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase Back     alignment and domain information
>PRK13748 putative mercuric reductase; Provisional Back     alignment and domain information
>KOG3855 consensus Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis [Coenzyme transport and metabolism; Energy production and conversion] Back     alignment and domain information
>KOG3923 consensus D-aspartate oxidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional Back     alignment and domain information
>PRK12770 putative glutamate synthase subunit beta; Provisional Back     alignment and domain information
>PRK14694 putative mercuric reductase; Provisional Back     alignment and domain information
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent Back     alignment and domain information
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B Back     alignment and domain information
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase Back     alignment and domain information
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK14727 putative mercuric reductase; Provisional Back     alignment and domain information
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional Back     alignment and domain information
>TIGR01438 TGR thioredoxin and glutathione reductase selenoprotein Back     alignment and domain information
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01816 sdhA_forward succinate dehydrogenase, flavoprotein subunit, E Back     alignment and domain information
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PTZ00052 thioredoxin reductase; Provisional Back     alignment and domain information
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated Back     alignment and domain information
>PRK06718 precorrin-2 dehydrogenase; Reviewed Back     alignment and domain information
>TIGR00518 alaDH alanine dehydrogenase Back     alignment and domain information
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional Back     alignment and domain information
>PRK06719 precorrin-2 dehydrogenase; Validated Back     alignment and domain information
>COG3634 AhpF Alkyl hydroperoxide reductase, large subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13434 K_oxygenase: L-lysine 6-monooxygenase (NADPH-requiring); PDB: 3S61_B 3S5W_B Back     alignment and domain information
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase Back     alignment and domain information
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated Back     alignment and domain information
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases Back     alignment and domain information
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional Back     alignment and domain information
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>PRK01368 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>PLN02411 12-oxophytodienoate reductase Back     alignment and domain information
>PTZ00318 NADH dehydrogenase-like protein; Provisional Back     alignment and domain information
>KOG2311 consensus NAD/FAD-utilizing protein possibly involved in translation [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional Back     alignment and domain information
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional Back     alignment and domain information
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside [] Back     alignment and domain information
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 Back     alignment and domain information
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) Back     alignment and domain information
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC Back     alignment and domain information
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 Back     alignment and domain information
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase Back     alignment and domain information
>PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional Back     alignment and domain information
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated Back     alignment and domain information
>PRK08306 dipicolinate synthase subunit A; Reviewed Back     alignment and domain information
>KOG1238 consensus Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) [General function prediction only] Back     alignment and domain information
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated Back     alignment and domain information
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion] Back     alignment and domain information
>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1624
2xaf_A852 Crystal Structure Of Lsd1-Corest In Complex With Pa 5e-67
2x0l_A734 Crystal Structure Of A Neuro-Specific Splicing Vari 1e-66
2v1d_A730 Structural Basis Of Lsd1-Corest Selectivity In Hist 1e-66
2hko_A664 Crystal Structure Of Lsd1 Length = 664 2e-66
2iw5_A666 Structural Basis For Corest-dependent Demethylation 2e-66
2h94_A664 Crystal Structure And Mechanism Of Human Lysine-Spe 2e-66
2ejr_A662 Lsd1-Tranylcypromine Complex Length = 662 2e-66
2dw4_A660 Crystal Structure Of Human Lsd1 At 2.3 A Resolution 2e-66
4fwe_A796 Native Structure Of Lsd2 /aof1/kdm1b In Spacegroup 2e-61
4gu1_A784 Crystal Structure Of Lsd2 Length = 784 4e-61
4gur_A776 Crystal Structure Of Lsd2-npac With H3 In Space Gro 5e-61
1b37_A472 A 30 Angstrom U-Shaped Catalytic Tunnel In The Crys 1e-15
3kpf_A478 X-Ray Structure Of The Mutant Lys300met Of Polyamin 5e-15
3rha_A482 The Crystal Structure Of Oxidoreductase From Arthro 1e-09
2yg3_A453 Structure-Based Redesign Of Cofactor Binding In Put 4e-08
2yg7_A453 Structure-Based Redesign Of Cofactor Binding In Put 4e-08
2yg5_A453 Structure-Based Redesign Of Cofactor Binding In Put 4e-08
2bxr_A527 Human Monoamine Oxidase A In Complex With Clorgylin 7e-08
2bxr_A527 Human Monoamine Oxidase A In Complex With Clorgylin 1e-04
2z5y_A513 Crystal Structure Of Human Monoamine Oxidase A (G11 7e-08
2z5y_A513 Crystal Structure Of Human Monoamine Oxidase A (G11 2e-04
2z5x_A513 Crystal Structure Of Human Monoamine Oxidase A With 7e-08
2z5x_A513 Crystal Structure Of Human Monoamine Oxidase A With 2e-04
2jae_A489 The Structure Of L-Amino Acid Oxidase From Rhodococ 7e-08
2yg6_A453 Structure-Based Redesign Of Cofactor Binding In Put 8e-07
1o5w_A534 The Structure Basis Of Specific Recognitions For Su 9e-07
1o5w_A534 The Structure Basis Of Specific Recognitions For Su 8e-05
2vvm_A495 The Structure Of Mao-N-D5, A Variant Of Monoamine O 7e-06
2vvl_G495 The Structure Of Mao-N-D3, A Variant Of Monoamine O 7e-06
2vvl_A495 The Structure Of Mao-N-D3, A Variant Of Monoamine O 7e-06
4ech_A516 Yeast Polyamine Oxidase Fms1, H67q Mutant Length = 7e-06
4ech_A516 Yeast Polyamine Oxidase Fms1, H67q Mutant Length = 2e-04
1z6l_A516 Crystal Structure Of Fms1 In Complex With Its Subst 8e-06
1z6l_A516 Crystal Structure Of Fms1 In Complex With Its Subst 2e-04
4gdp_A516 Yeast Polyamine Oxidase Fms1, N195a Mutant Length = 8e-06
4gdp_A516 Yeast Polyamine Oxidase Fms1, N195a Mutant Length = 2e-04
1yy5_A513 Crystal Structure Of Fms1, A Polyamine Oxidase From 8e-06
1yy5_A513 Crystal Structure Of Fms1, A Polyamine Oxidase From 2e-04
1rsg_A516 Crystal Structure Of The Polyamine Oxidase Fms1 Fro 8e-06
1rsg_A516 Crystal Structure Of The Polyamine Oxidase Fms1 Fro 2e-04
2c75_A520 Functional Role Of The Aromatic Cage In Human Monoa 8e-06
1gos_A520 Human Monoamine Oxidase B Length = 520 9e-06
2xfu_A519 Human Monoamine Oxidase B With Tranylcypromine Leng 9e-06
2xfo_A520 Tranylcypromine-Inhibited Human Monoamine Oxidase B 1e-05
2c72_A520 Functional Role Of The Aromatic Cage In Human Monoa 1e-05
2bk4_A520 Human Monoamine Oxidase B: I199f Mutant In Complex 1e-05
2c73_A520 Functional Role Of The Aromatic Cage In Human Monoa 1e-05
2c76_A520 Functional Role Of The Aromatic Cage In Human Monoa 1e-05
3kve_A486 Structure Of Native L-Amino Acid Oxidase From Viper 3e-05
3kve_A486 Structure Of Native L-Amino Acid Oxidase From Viper 4e-05
3zyx_A519 Crystal Structure Of Human Monoamine Oxidase B In C 3e-05
3zyx_A519 Crystal Structure Of Human Monoamine Oxidase B In C 5e-05
2e1m_A376 Crystal Structure Of L-Glutamate Oxidase From Strep 6e-05
4e0v_A497 Structure Of L-Amino Acid Oxidase From The B. Jarar 7e-05
4e0v_A497 Structure Of L-Amino Acid Oxidase From The B. Jarar 4e-04
3k7m_X431 Crystal Structure Of 6-Hydroxy-L-Nicotine Oxidase F 7e-05
3k7t_A425 Crystal Structure Of Apo-Form 6-Hydroxy-L-Nicotine 7e-05
1f8r_A498 Crystal Structure Of L-Amino Acid Oxidase From Call 7e-05
1reo_A486 L-Amino Acid Oxidase From Agkistrodon Halys Pallas 1e-04
1reo_A486 L-Amino Acid Oxidase From Agkistrodon Halys Pallas 4e-04
1sez_A504 Crystal Structure Of Protoporphyrinogen Ix Oxidase 5e-04
3k30_A690 Histamine Dehydrogenase From Nocardiodes Simplex Le 8e-04
>pdb|2XAF|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With Para-Bromo- (+)-Cis-2-Phenylcyclopropyl-1-Amine Length = 852 Back     alignment and structure

Iteration: 1

Score = 253 bits (647), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 137/314 (43%), Positives = 186/314 (59%), Gaps = 21/314 (6%) Query: 1051 LSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMIKGGYSTVVEALG 1110 LS +R+++DWHFANLE+ A L +SL W+QDD + F G+H ++ GYS V AL Sbjct: 521 LSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFE-FTGSHLTVRNGYSCVPVALA 579 Query: 1111 KELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGCLKAE--S 1168 + L I N V + Y+ ++ +R STS + DAVL T+PLG LK + + Sbjct: 580 EGLDIKLNTAVRQVRYTASGCEVIAVNTR---STSQTFIYKCDAVLCTLPLGVLKQQPPA 636 Query: 1169 IMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWN 1228 + F PPLP+WK SA+QR+GFG LNKVVL F VFWD +V+ FG T RG F+FWN Sbjct: 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWN 696 Query: 1229 VRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGXXXXXXXXXXXXTDWGR 1288 + K AP+L+ALV G+AA +N+S V + +L+ IFG + W Sbjct: 697 LYK---APILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRA 753 Query: 1289 DPFSYGAYSYVATGASGEDYDILGRPVENC------------LFFAGEATCKEHPDTVGG 1336 DP++ G+YSYVA G+SG DYD++ +P+ LFFAGE T + +P TV G Sbjct: 754 DPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHG 813 Query: 1337 AMLSGLREAVRIID 1350 A+LSGLREA RI D Sbjct: 814 ALLSGLREAGRIAD 827
>pdb|2X0L|A Chain A, Crystal Structure Of A Neuro-Specific Splicing Variant Of Human Histone Lysine Demethylase Lsd1 Length = 734 Back     alignment and structure
>pdb|2V1D|A Chain A, Structural Basis Of Lsd1-Corest Selectivity In Histone H3 Recognition Length = 730 Back     alignment and structure
>pdb|2HKO|A Chain A, Crystal Structure Of Lsd1 Length = 664 Back     alignment and structure
>pdb|2IW5|A Chain A, Structural Basis For Corest-dependent Demethylation Of Nucleosomes By The Human Lsd1 Histone Demethylase Length = 666 Back     alignment and structure
>pdb|2H94|A Chain A, Crystal Structure And Mechanism Of Human Lysine-Specific Demethylase-1 Length = 664 Back     alignment and structure
>pdb|2EJR|A Chain A, Lsd1-Tranylcypromine Complex Length = 662 Back     alignment and structure
>pdb|2DW4|A Chain A, Crystal Structure Of Human Lsd1 At 2.3 A Resolution Length = 660 Back     alignment and structure
>pdb|4FWE|A Chain A, Native Structure Of Lsd2 /aof1/kdm1b In Spacegroup Of C2221 At 2.13a Length = 796 Back     alignment and structure
>pdb|4GU1|A Chain A, Crystal Structure Of Lsd2 Length = 784 Back     alignment and structure
>pdb|4GUR|A Chain A, Crystal Structure Of Lsd2-npac With H3 In Space Group P21 Length = 776 Back     alignment and structure
>pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal Structure Of Polyamine Oxidase Length = 472 Back     alignment and structure
>pdb|3KPF|A Chain A, X-Ray Structure Of The Mutant Lys300met Of Polyamine Oxidase From Zea Mays Length = 478 Back     alignment and structure
>pdb|3RHA|A Chain A, The Crystal Structure Of Oxidoreductase From Arthrobacter Aurescens Length = 482 Back     alignment and structure
>pdb|2YG3|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine Oxidase: Wild Type Enzyme Length = 453 Back     alignment and structure
>pdb|2YG7|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine Oxidase: A394c-A396t-Q431g Triple Mutant Length = 453 Back     alignment and structure
>pdb|2YG5|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine Oxidase: A394c Mutant Length = 453 Back     alignment and structure
>pdb|2BXR|A Chain A, Human Monoamine Oxidase A In Complex With Clorgyline, Crystal Form A Length = 527 Back     alignment and structure
>pdb|2BXR|A Chain A, Human Monoamine Oxidase A In Complex With Clorgyline, Crystal Form A Length = 527 Back     alignment and structure
>pdb|2Z5Y|A Chain A, Crystal Structure Of Human Monoamine Oxidase A (G110a) With Harmine Length = 513 Back     alignment and structure
>pdb|2Z5Y|A Chain A, Crystal Structure Of Human Monoamine Oxidase A (G110a) With Harmine Length = 513 Back     alignment and structure
>pdb|2Z5X|A Chain A, Crystal Structure Of Human Monoamine Oxidase A With Harmine Length = 513 Back     alignment and structure
>pdb|2Z5X|A Chain A, Crystal Structure Of Human Monoamine Oxidase A With Harmine Length = 513 Back     alignment and structure
>pdb|2JAE|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus Opacus In The Unbound State Length = 489 Back     alignment and structure
>pdb|2YG6|A Chain A, Structure-Based Redesign Of Cofactor Binding In Putrescine Oxidase: P15i-A394c Double Mutant Length = 453 Back     alignment and structure
>pdb|1O5W|A Chain A, The Structure Basis Of Specific Recognitions For Substrates And Inhibitors Of Rat Monoamine Oxidase A Length = 534 Back     alignment and structure
>pdb|1O5W|A Chain A, The Structure Basis Of Specific Recognitions For Substrates And Inhibitors Of Rat Monoamine Oxidase A Length = 534 Back     alignment and structure
>pdb|2VVM|A Chain A, The Structure Of Mao-N-D5, A Variant Of Monoamine Oxidase From Aspergillus Niger. Length = 495 Back     alignment and structure
>pdb|2VVL|G Chain G, The Structure Of Mao-N-D3, A Variant Of Monoamine Oxidase From Aspergillus Niger Length = 495 Back     alignment and structure
>pdb|2VVL|A Chain A, The Structure Of Mao-N-D3, A Variant Of Monoamine Oxidase From Aspergillus Niger. Length = 495 Back     alignment and structure
>pdb|4ECH|A Chain A, Yeast Polyamine Oxidase Fms1, H67q Mutant Length = 516 Back     alignment and structure
>pdb|4ECH|A Chain A, Yeast Polyamine Oxidase Fms1, H67q Mutant Length = 516 Back     alignment and structure
>pdb|1Z6L|A Chain A, Crystal Structure Of Fms1 In Complex With Its Substrate Length = 516 Back     alignment and structure
>pdb|1Z6L|A Chain A, Crystal Structure Of Fms1 In Complex With Its Substrate Length = 516 Back     alignment and structure
>pdb|4GDP|A Chain A, Yeast Polyamine Oxidase Fms1, N195a Mutant Length = 516 Back     alignment and structure
>pdb|4GDP|A Chain A, Yeast Polyamine Oxidase Fms1, N195a Mutant Length = 516 Back     alignment and structure
>pdb|1YY5|A Chain A, Crystal Structure Of Fms1, A Polyamine Oxidase From Yeast Length = 513 Back     alignment and structure
>pdb|1YY5|A Chain A, Crystal Structure Of Fms1, A Polyamine Oxidase From Yeast Length = 513 Back     alignment and structure
>pdb|1RSG|A Chain A, Crystal Structure Of The Polyamine Oxidase Fms1 From Yeast Length = 516 Back     alignment and structure
>pdb|1RSG|A Chain A, Crystal Structure Of The Polyamine Oxidase Fms1 From Yeast Length = 516 Back     alignment and structure
>pdb|2C75|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine Oxidase B: Structures And Catalytic Properties Of Tyr435 Mutant Proteins Length = 520 Back     alignment and structure
>pdb|1GOS|A Chain A, Human Monoamine Oxidase B Length = 520 Back     alignment and structure
>pdb|2XFU|A Chain A, Human Monoamine Oxidase B With Tranylcypromine Length = 519 Back     alignment and structure
>pdb|2XFO|A Chain A, Tranylcypromine-Inhibited Human Monoamine Oxidase B Ile199ala Mutant In Complex With 2-(2-Benzofuranyl)-2- Imidazoline Length = 520 Back     alignment and structure
>pdb|2C72|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine Oxidase B: Structures And Catalytic Properties Of Tyr435 Mutant Proteins Length = 520 Back     alignment and structure
>pdb|2BK4|A Chain A, Human Monoamine Oxidase B: I199f Mutant In Complex With Rasagiline Length = 520 Back     alignment and structure
>pdb|2C73|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine Oxidase B: Structures And Catalytic Properties Of Tyr435 Mutant Proteins Length = 520 Back     alignment and structure
>pdb|2C76|A Chain A, Functional Role Of The Aromatic Cage In Human Monoamine Oxidase B: Structures And Catalytic Properties Of Tyr435 Mutant Proteins Length = 520 Back     alignment and structure
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera Ammodytes Ammodytes: Stabilization Of The Quaternary Structure By Divalent Ions And Structural Changes In The Dynamic Active Site Length = 486 Back     alignment and structure
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera Ammodytes Ammodytes: Stabilization Of The Quaternary Structure By Divalent Ions And Structural Changes In The Dynamic Active Site Length = 486 Back     alignment and structure
>pdb|3ZYX|A Chain A, Crystal Structure Of Human Monoamine Oxidase B In Complex With Methylene Blue And Bearing The Double Mutation I199a- Y326a Length = 519 Back     alignment and structure
>pdb|3ZYX|A Chain A, Crystal Structure Of Human Monoamine Oxidase B In Complex With Methylene Blue And Bearing The Double Mutation I199a- Y326a Length = 519 Back     alignment and structure
>pdb|2E1M|A Chain A, Crystal Structure Of L-Glutamate Oxidase From Streptomyces Sp. X-119-6 Length = 376 Back     alignment and structure
>pdb|4E0V|A Chain A, Structure Of L-Amino Acid Oxidase From The B. Jararacussu Venom Length = 497 Back     alignment and structure
>pdb|4E0V|A Chain A, Structure Of L-Amino Acid Oxidase From The B. Jararacussu Venom Length = 497 Back     alignment and structure
>pdb|3K7M|X Chain X, Crystal Structure Of 6-Hydroxy-L-Nicotine Oxidase From Arthrobacter Nicotinovorans Length = 431 Back     alignment and structure
>pdb|3K7T|A Chain A, Crystal Structure Of Apo-Form 6-Hydroxy-L-Nicotine Oxidase, Crystal Form P3121 Length = 425 Back     alignment and structure
>pdb|1F8R|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From Calloselasma Rhodostoma Complexed With Citrate Length = 498 Back     alignment and structure
>pdb|1REO|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys Pallas Length = 486 Back     alignment and structure
>pdb|1REO|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys Pallas Length = 486 Back     alignment and structure
>pdb|1SEZ|A Chain A, Crystal Structure Of Protoporphyrinogen Ix Oxidase Length = 504 Back     alignment and structure
>pdb|3K30|A Chain A, Histamine Dehydrogenase From Nocardiodes Simplex Length = 690 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1624
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 1e-127
1s3e_A520 Amine oxidase [flavin-containing] B; human monoami 1e-122
2yg5_A453 Putrescine oxidase; oxidoreductase, flavin; HET: F 1e-114
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 1e-113
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 3e-18
1rsg_A516 FMS1 protein; FAD binding motif, oxidoreductase; H 1e-108
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 1e-101
2iid_A498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 1e-98
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 2e-96
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 3e-94
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 4e-16
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 1e-92
2e1m_C181 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 4e-27
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 8e-27
1sez_A504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 1e-26
2b9w_A424 Putative aminooxidase; isomerase, conjugated linol 1e-23
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 7e-23
2ivd_A478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 5e-21
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 1e-20
2e1m_B130 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 2e-20
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 1e-19
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 2e-19
4dsg_A484 UDP-galactopyranose mutase; rossmann fold, flavin 1e-16
3utf_A513 UDP-galactopyranose mutase; nucleotide binding, fl 7e-14
2bi7_A384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 9e-14
3ayj_A721 Pro-enzyme of L-phenylalanine oxidase; amino acid 2e-13
2fq3_A104 Transcription regulatory protein SWI3; four-helix 3e-13
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 3e-13
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 4e-13
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 1e-12
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 2e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-12
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 7e-12
1v0j_A399 UDP-galactopyranose mutase; flavoprotein, isomeras 6e-11
2dce_A111 KIAA1915 protein; swirm domain, structural genomic 4e-10
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 4e-10
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 5e-10
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 6e-10
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 6e-10
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 2e-09
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 2e-09
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 3e-09
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 4e-09
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 7e-09
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 1e-08
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 2e-08
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 3e-08
3e1t_A512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 4e-08
3i3l_A591 Alkylhalidase CMLS; flavin-dependent halogenase, c 4e-08
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 5e-08
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 8e-08
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 1e-07
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 1e-07
3atr_A453 Conserved archaeal protein; saturating double bond 2e-07
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 2e-07
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 3e-07
3v76_A417 Flavoprotein; structural genomics, PSI-biology, NE 3e-07
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 4e-07
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 4e-07
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 4e-07
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 6e-07
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 7e-07
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 9e-07
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 1e-06
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 2e-06
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 2e-06
2gqf_A401 Hypothetical protein HI0933; structural genomics, 4e-06
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 6e-06
2gag_A965 Heterotetrameric sarcosine oxidase alpha-subunit; 6e-06
2i0z_A447 NAD(FAD)-utilizing dehydrogenases; structural geno 7e-06
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 8e-06
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 9e-06
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 2e-05
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 2e-05
3nlc_A549 Uncharacterized protein VP0956; FAD-binding protei 2e-05
1y56_A493 Hypothetical protein PH1363; dehydrogenase, protei 3e-05
3gwf_A540 Cyclohexanone monooxygenase; flavoprotein biocatal 3e-05
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 3e-05
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 4e-05
4fk1_A304 Putative thioredoxin reductase; structural genomic 4e-05
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 4e-05
2qa2_A499 CABE, polyketide oxygenase CABE; FAD, angucycline, 4e-05
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 4e-05
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 5e-05
3sx6_A437 Sulfide-quinone reductase, putative; sulfide:quino 5e-05
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 5e-05
2qa1_A500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 5e-05
3dme_A369 Conserved exported protein; structural genomics, P 5e-05
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 6e-05
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 6e-05
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 7e-05
3ihg_A535 RDME; flavoenzyme, anthracycline, polyketide biosy 8e-05
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 8e-05
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 1e-04
1lqt_A456 FPRA; NADP+ derivative, oxidoreductase, structural 1e-04
1fcd_A401 Flavocytochrome C sulfide dehydrogenase (flavin- b 1e-04
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 2e-04
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 2e-04
2bry_A497 NEDD9 interacting protein with calponin homology a 2e-04
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 2e-04
2r0c_A549 REBC; flavin adenine dinucleotide, monooxygenase, 2e-04
3fmw_A570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 2e-04
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 2e-04
3h8l_A409 NADH oxidase; membrane protein, complete form, ros 3e-04
2ywl_A180 Thioredoxin reductase related protein; uncharacter 3e-04
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 3e-04
3lk7_A451 UDP-N-acetylmuramoylalanine--D-glutamate ligase; a 4e-04
2dkh_A639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 4e-04
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 8e-04
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 8e-04
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 8e-04
2x5o_A439 UDP-N-acetylmuramoylalanine--D-glutamate ligase; A 8e-04
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 8e-04
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Length = 472 Back     alignment and structure
 Score =  405 bits (1041), Expect = e-127
 Identities = 117/509 (22%), Positives = 192/509 (37%), Gaps = 69/509 (13%)

Query: 860  VKKRIIVIGAGPAGLTAARHLQRQGFS-VTVLEARNRIGGRVYTDRTSLSVPVDLGASII 918
            V  R+IV+GAG +G++AA+ L   G + + +LEA + IGGR++       + V+LGA+ +
Sbjct: 3    VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWV 61

Query: 919  TGVEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSL 978
             GV                     L+L    SD         ++     DE    +   L
Sbjct: 62   EGVNGGKMNPIWPI------VNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIEL 115

Query: 979  LDDMVLLVAQKGEHAMKMSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVDS 1038
             D +  +  +          +D    A++R                           ++ 
Sbjct: 116  ADSVEEMGEKLSATLHASGRDDMSILAMQR---------------------------LNE 148

Query: 1039 RVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCMI 1098
              P+   +           V+D++  + E+      +  SL        +  FG     +
Sbjct: 149  HQPNGPATPV-------DMVVDYYKFDYEFAEPP--RVTSLQNTVPLATFSDFGDDVYFV 199

Query: 1099 --KGGYSTVVEALGKELL-------------IHHNHVVTDISYSFKDSDLSDGQSRVKVS 1143
              + GY  VV  L  + L             +  N VV +I YS            V V 
Sbjct: 200  ADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS---------PGGVTVK 250

Query: 1144 TSNGSEFSGDAVLITVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFW 1203
            T + S +S D V+++  LG L+++ I F P LP WK  AI +    V  K+ L+F   FW
Sbjct: 251  TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFW 310

Query: 1204 DDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAV 1263
             +           +            ++   A VL+  V  + +   +  S        +
Sbjct: 311  PEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIM 370

Query: 1264 MVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVENCLFFAG 1323
             VLR++F    VPD    +V  W  D F  G +S    G +  +YD L  PV   ++F G
Sbjct: 371  QVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGR-VYFTG 429

Query: 1324 EATCKEHPDTVGGAMLSGLREAVRIIDIL 1352
            E T + +   V GA LSG+  A  +I+  
Sbjct: 430  EHTSEHYNGYVHGAYLSGIDSAEILINCA 458


>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Length = 520 Back     alignment and structure
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Length = 453 Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Length = 852 Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Length = 516 Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Length = 431 Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Length = 498 Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Length = 495 Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662 Back     alignment and structure
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Length = 662 Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Length = 489 Back     alignment and structure
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 181 Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 376 Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Length = 504 Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Length = 424 Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Length = 470 Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Length = 478 Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Length = 477 Back     alignment and structure
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Length = 130 Back     alignment and structure
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Length = 421 Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Length = 475 Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Length = 484 Back     alignment and structure
>3utf_A UDP-galactopyranose mutase; nucleotide binding, flavin adenine dinucleotide BIND isomerase; HET: FDA; 2.25A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Length = 513 Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Length = 384 Back     alignment and structure
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Length = 721 Back     alignment and structure
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18 Length = 104 Back     alignment and structure
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Length = 425 Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Length = 447 Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Length = 367 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Length = 397 Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Length = 399 Back     alignment and structure
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 111 Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Length = 398 Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Length = 357 Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Length = 690 Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Length = 729 Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Length = 464 Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Length = 671 Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Length = 421 Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Length = 407 Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Length = 456 Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Length = 379 Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Length = 369 Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Length = 512 Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Length = 591 Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Length = 430 Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Length = 1025 Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Length = 397 Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} SCOP: c.3.1.6 PDB: 3fpz_A* Length = 326 Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Length = 453 Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Length = 342 Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Length = 542 Back     alignment and structure
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti} Length = 417 Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Length = 344 Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Length = 363 Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Length = 284 Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Length = 410 Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Length = 545 Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Length = 549 Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Length = 381 Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Length = 399 Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Length = 394 Back     alignment and structure
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1 Length = 401 Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Length = 397 Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Length = 965 Back     alignment and structure
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 Length = 447 Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Length = 382 Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Length = 372 Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Length = 433 Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Length = 297 Back     alignment and structure
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus} Length = 549 Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Length = 493 Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Length = 540 Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Length = 360 Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Length = 623 Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Length = 304 Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Length = 389 Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Length = 499 Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Length = 332 Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Length = 460 Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Length = 437 Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Length = 351 Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Length = 500 Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Length = 369 Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Length = 335 Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Length = 566 Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Length = 535 Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Length = 572 Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Length = 571 Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Length = 456 Back     alignment and structure
>1fcd_A Flavocytochrome C sulfide dehydrogenase (flavin- binding subunit); electron transport(flavocytochrome); HET: FAD HEM; 2.53A {Allochromatium vinosum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Length = 401 Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Length = 510 Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Length = 504 Back     alignment and structure
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* Length = 497 Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Length = 507 Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Length = 549 Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Length = 570 Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Length = 319 Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Length = 409 Back     alignment and structure
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A* Length = 180 Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Length = 438 Back     alignment and structure
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} Length = 451 Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Length = 639 Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Length = 385 Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Length = 367 Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Length = 408 Back     alignment and structure
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* Length = 439 Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Length = 431 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1624
2z3y_A662 Lysine-specific histone demethylase 1; chromatin, 100.0
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 100.0
4gut_A776 Lysine-specific histone demethylase 1B; histone de 100.0
1rsg_A516 FMS1 protein; FAD binding motif, oxidoreductase; H 100.0
1s3e_A520 Amine oxidase [flavin-containing] B; human monoami 100.0
1b37_A472 Protein (polyamine oxidase); flavin-dependent amin 100.0
2yg5_A453 Putrescine oxidase; oxidoreductase, flavin; HET: F 100.0
2vvm_A495 Monoamine oxidase N; FAD, peroxisome, flavoprotein 100.0
2iid_A498 L-amino-acid oxidase; flavoenzyme, FAD binding dom 100.0
3k7m_X431 6-hydroxy-L-nicotine oxidase; enantiomeric substra 100.0
2jae_A489 L-amino acid oxidase; oxidoreductase, dimerisation 100.0
3i6d_A470 Protoporphyrinogen oxidase; protein-inhibitor comp 100.0
3ayj_A721 Pro-enzyme of L-phenylalanine oxidase; amino acid 100.0
2ivd_A478 PPO, PPOX, protoporphyrinogen oxidase; porphyrin b 100.0
1sez_A504 Protoporphyrinogen oxidase, mitochondrial; FAD-bin 100.0
3lov_A475 Protoporphyrinogen oxidase; structural genomics, J 100.0
3ka7_A425 Oxidoreductase; structural genomics, PSI-2, protei 99.97
4dgk_A501 Phytoene dehydrogenase; the FAD/NAD(P)-binding ros 99.97
4gde_A513 UDP-galactopyranose mutase; flavin adenine dinucle 99.97
3nks_A477 Protoporphyrinogen oxidase; FAD containing protein 99.97
3nrn_A421 Uncharacterized protein PF1083; alpha-beta protein 99.96
3qj4_A342 Renalase; FAD/NAD(P)-binding rossmann fold superfa 99.96
2b9w_A424 Putative aminooxidase; isomerase, conjugated linol 99.95
4dsg_A484 UDP-galactopyranose mutase; rossmann fold, flavin 99.94
1yvv_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.92
1v0j_A399 UDP-galactopyranose mutase; flavoprotein, isomeras 99.86
1i8t_A367 UDP-galactopyranose mutase; rossman fold, FAD, con 99.79
2bi7_A384 UDP-galactopyranose mutase; FAD, flavoprotein, iso 99.78
2bcg_G453 Secretory pathway GDP dissociation inhibitor; RABG 99.75
3hdq_A397 UDP-galactopyranose mutase; substrate and inhibito 99.73
3kkj_A336 Amine oxidase, flavin-containing; oxidoreductase, 99.67
1d5t_A433 Guanine nucleotide dissociation inhibitor; ultra-h 99.67
2e1m_C181 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 99.67
2e1m_A376 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 99.62
3p1w_A475 Rabgdi protein; GDI RAB, malaria, structural genom 99.47
2dce_A111 KIAA1915 protein; swirm domain, structural genomic 99.43
2fq3_A104 Transcription regulatory protein SWI3; four-helix 99.4
1vg0_A650 RAB proteins geranylgeranyltransferase component A 99.3
3k30_A690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 99.29
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 99.25
1ps9_A671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 99.08
3oz2_A397 Digeranylgeranylglycerophospholipid reductase; str 99.08
3dme_A369 Conserved exported protein; structural genomics, P 99.03
2e1m_B130 L-glutamate oxidase; L-amino acid oxidase, FAD, L- 99.01
3nyc_A381 D-arginine dehydrogenase; FAD, imino-arginine, oxi 98.97
3dje_A438 Fructosyl amine: oxygen oxidoreductase; fructosyl- 98.96
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 98.86
4hb9_A412 Similarities with probable monooxygenase; flavin, 98.85
3rp8_A407 Flavoprotein monooxygenase; FAD-binding protein, o 98.84
3nix_A421 Flavoprotein/dehydrogenase; structural genomics, P 98.83
3ihg_A535 RDME; flavoenzyme, anthracycline, polyketide biosy 98.79
3cgv_A397 Geranylgeranyl reductase related protein; NP_39399 98.76
1ryi_A382 Glycine oxidase; flavoprotein, protein-inhibitor c 98.76
3fmw_A570 Oxygenase; mithramycin, baeyer-villiger, flavin bi 98.75
1y56_B382 Sarcosine oxidase; dehydrogenase, protein-protein 98.72
3ps9_A676 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 98.68
3pvc_A689 TRNA 5-methylaminomethyl-2-thiouridine biosynthes 98.65
3e1t_A512 Halogenase; flavoprotein; HET: FAD; 2.05A {Chondro 98.65
2gf3_A389 MSOX, monomeric sarcosine oxidase; flavoprotein ox 98.63
2gmh_A584 Electron transfer flavoprotein-ubiquinone oxidored 98.61
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 98.6
3v76_A417 Flavoprotein; structural genomics, PSI-biology, NE 98.6
2qa2_A499 CABE, polyketide oxygenase CABE; FAD, angucycline, 98.58
2qa1_A500 PGAE, polyketide oxygenase PGAE; FAD, angucycline, 98.57
2r0c_A549 REBC; flavin adenine dinucleotide, monooxygenase, 98.56
3i3l_A591 Alkylhalidase CMLS; flavin-dependent halogenase, c 98.54
3da1_A561 Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9 98.53
3atr_A453 Conserved archaeal protein; saturating double bond 98.52
2gag_B405 Heterotetrameric sarcosine oxidase beta-subunit; f 98.45
2uzz_A372 N-methyl-L-tryptophan oxidase; N-methyltryptophan 98.36
2vou_A397 2,6-dihydroxypyridine hydroxylase; oxidoreductase, 98.34
1gte_A1025 Dihydropyrimidine dehydrogenase; electron transfer 98.32
2gqf_A401 Hypothetical protein HI0933; structural genomics, 98.31
3nlc_A549 Uncharacterized protein VP0956; FAD-binding protei 98.28
2i0z_A447 NAD(FAD)-utilizing dehydrogenases; structural geno 98.28
2xdo_A398 TETX2 protein; tetracycline degradation, tigecycli 98.27
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 98.25
1w4x_A542 Phenylacetone monooxygenase; baeyer-villiger, FAD; 98.25
1y0p_A571 Fumarate reductase flavoprotein subunit; flavocyto 98.22
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 98.21
3fpz_A326 Thiazole biosynthetic enzyme; FAD, mitochondrion, 98.19
1qo8_A566 Flavocytochrome C3 fumarate reductase; oxidoreduct 98.16
3gwf_A540 Cyclohexanone monooxygenase; flavoprotein biocatal 98.16
2x3n_A399 Probable FAD-dependent monooxygenase; oxidoreducta 98.15
1pj5_A830 N,N-dimethylglycine oxidase; channelling, FAD bind 98.12
3axb_A448 Putative oxidoreductase; dinucleotide-binding fold 98.08
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 97.99
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 97.97
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 97.95
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 97.92
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 97.91
4fk1_A304 Putative thioredoxin reductase; structural genomic 97.82
3r9u_A315 Thioredoxin reductase; structural genomics, center 97.82
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 97.78
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 97.76
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 97.73
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 97.7
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 97.7
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 97.7
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 97.68
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 97.67
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 97.61
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 97.61
2oln_A397 NIKD protein; flavoprotein, rossmann fold, oxidore 97.59
3ihm_A430 Styrene monooxygenase A; rossman fold, anti-parall 97.59
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 97.58
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 97.57
1rp0_A284 ARA6, thiazole biosynthetic enzyme; protein ligand 97.57
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 97.56
4dna_A463 Probable glutathione reductase; structural genomic 97.56
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 97.56
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 97.54
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 97.54
2bry_A497 NEDD9 interacting protein with calponin homology a 97.54
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 97.53
1c0p_A363 D-amino acid oxidase; alpha-beta-alpha motif, flav 97.53
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 97.53
3alj_A379 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; 97.52
4at0_A510 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidore 97.5
3jsk_A344 Cypbp37 protein; octameric thiazole synthase, bios 97.5
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 97.48
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 97.48
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 97.47
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 97.47
3c96_A410 Flavin-containing monooxygenase; FAD, oxidoreducta 97.46
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 97.45
3c4a_A381 Probable tryptophan hydroxylase VIOD; alpha-beta p 97.45
2gjc_A326 Thiazole biosynthetic enzyme, mitochondrial; gluta 97.45
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 97.43
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 97.43
3g3e_A351 D-amino-acid oxidase; FAD, flavoprotein, oxidoredu 97.42
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 97.4
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 97.4
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 97.4
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 97.38
1fec_A490 Trypanothione reductase; redox-active center, oxid 97.37
2cul_A232 Glucose-inhibited division protein A-related PROT 97.35
1ojt_A482 Surface protein; redox-active center, glycolysis, 97.35
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 97.35
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 97.34
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 97.34
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 97.34
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 97.33
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 97.32
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 97.31
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 97.31
2qcu_A501 Aerobic glycerol-3-phosphate dehydrogenase; glycer 97.29
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 97.29
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 97.28
1d4d_A572 Flavocytochrome C fumarate reductase; oxidoreducta 97.28
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 97.26
3c4n_A405 Uncharacterized protein DR_0571; alpha-beta protei 97.25
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 97.24
2rgh_A571 Alpha-glycerophosphate oxidase; flavoprotein oxida 97.24
1lqt_A456 FPRA; NADP+ derivative, oxidoreductase, structural 97.21
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 97.21
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 97.18
2ywl_A180 Thioredoxin reductase related protein; uncharacter 97.18
2gag_A965 Heterotetrameric sarcosine oxidase alpha-subunit; 97.18
3g5s_A443 Methylenetetrahydrofolate--tRNA-(uracil-5-)- methy 97.16
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 97.14
3h28_A430 Sulfide-quinone reductase; monotopic membrane prot 97.13
1y56_A493 Hypothetical protein PH1363; dehydrogenase, protei 97.13
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 97.12
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 97.12
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 97.12
3h8l_A409 NADH oxidase; membrane protein, complete form, ros 97.09
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 97.08
2aqj_A538 Tryptophan halogenase, pRNA; flavin-dependent halo 97.08
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 97.07
3pl8_A623 Pyranose 2-oxidase; substrate complex, H167A mutan 97.06
2wdq_A588 Succinate dehydrogenase flavoprotein subunit; succ 97.05
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 97.05
2e5v_A472 L-aspartate oxidase; archaea, oxidoreductase; HET: 97.02
2weu_A511 Tryptophan 5-halogenase; regioselectivity, antifun 97.02
2h88_A621 Succinate dehydrogenase flavoprotein subunit; comp 96.98
2dkh_A639 3-hydroxybenzoate hydroxylase; flavoprotein, monoo 96.96
1chu_A540 Protein (L-aspartate oxidase); flavoenzyme, NAD bi 96.96
2pyx_A526 Tryptophan halogenase; structural genomics, JOI fo 96.95
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 96.95
2bs2_A660 Quinol-fumarate reductase flavoprotein subunit A; 96.94
3cp8_A641 TRNA uridine 5-carboxymethylaminomethyl modificati 96.92
2zxi_A637 TRNA uridine 5-carboxymethylaminomethyl modificat 96.92
2e4g_A550 Tryptophan halogenase; flavin-binding, rebeccamyci 96.92
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 96.91
3ces_A651 MNMG, tRNA uridine 5-carboxymethylaminomethyl modi 96.87
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 96.81
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 96.79
1kf6_A602 Fumarate reductase flavoprotein; respiration, fuma 96.78
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 96.76
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 96.76
3vrd_B401 FCCB subunit, flavocytochrome C flavin subunit; su 96.73
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 96.73
1pn0_A665 Phenol 2-monooxygenase; two dimers, TLS refinement 96.73
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 96.66
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 96.65
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 96.64
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 96.61
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 96.59
3gyx_A662 Adenylylsulfate reductase; oxidoreductase; HET: FA 96.57
1jnr_A643 Adenylylsulfate reductase; oxidoreductase; HET: FA 96.56
3sx6_A437 Sulfide-quinone reductase, putative; sulfide:quino 96.55
1kdg_A546 CDH, cellobiose dehydrogenase; GMC oxidoreductase, 96.51
3hyw_A430 Sulfide-quinone reductase; monotopic membrane prot 96.51
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 96.47
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 96.43
4g6h_A502 Rotenone-insensitive NADH-ubiquinone oxidoreducta 96.36
3t37_A526 Probable dehydrogenase; BET alpha beta fold, ADP b 96.12
1ju2_A536 HydroxynitrIle lyase; flavin, GMC oxidoreductase, 95.91
3q9t_A577 Choline dehydrogenase and related flavoproteins; g 95.83
1n4w_A504 CHOD, cholesterol oxidase; flavoenzyme, steroid me 95.78
1coy_A507 Cholesterol oxidase; oxidoreductase(oxygen recepto 95.24
4b63_A501 L-ornithine N5 monooxygenase; oxidoreductase, side 95.09
3qvp_A583 Glucose oxidase; oxidoreductase; HET: NAG BMA MAN 95.07
3fim_B566 ARYL-alcohol oxidase; AAO, lignin degradation, oxi 94.94
2jbv_A546 Choline oxidase; alcohol oxidation, flavoenyzme ox 94.76
1gpe_A587 Protein (glucose oxidase); oxidoreductase(flavopro 94.58
4gcm_A312 TRXR, thioredoxin reductase; FAD/NAD-linked reduct 94.56
2xpp_A145 IWS1, ECU08_0440; transcription, elongation, histo 94.24
1nhp_A447 NADH peroxidase; oxidoreductase (H2O2(A)); HET: FA 94.19
3nfq_A170 Transcription factor IWS1; SPN1, RNA polymerase II 94.02
3klj_A385 NAD(FAD)-dependent dehydrogenase, NIRB-family (N- 94.01
2g1u_A155 Hypothetical protein TM1088A; structural genomics, 93.93
1lvl_A458 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 93.72
2eq6_A464 Pyruvate dehydrogenase complex, dihydrolipoamide d 93.47
1v59_A478 Dihydrolipoamide dehydrogenase; 2-oxoacid dehydrog 93.45
2v3a_A384 Rubredoxin reductase; alkane degradation, NADH oxi 93.33
4a5l_A314 Thioredoxin reductase; oxidoreductase, redox metab 93.25
3fwz_A140 Inner membrane protein YBAL; TRKA-N domain, E.coli 93.19
1ebd_A455 E3BD, dihydrolipoamide dehydrogenase; redox-active 93.19
1xhc_A367 NADH oxidase /nitrite reductase; southe collaborat 93.15
2yqu_A455 2-oxoglutarate dehydrogenase E3 component; lipoami 93.14
2x5o_A439 UDP-N-acetylmuramoylalanine--D-glutamate ligase; A 92.96
1lss_A140 TRK system potassium uptake protein TRKA homolog; 92.9
2gqw_A408 Ferredoxin reductase; flavoprotein, oxidoreductase 92.75
1ges_A450 Glutathione reductase; oxidoreductase(flavoenzyme) 92.68
1wjt_A103 Transcription elongation factor S-II protein 3; fo 92.55
3ic5_A118 Putative saccharopine dehydrogenase; structural ge 92.54
3llv_A141 Exopolyphosphatase-related protein; NAD(P)-binding 92.44
3ic9_A492 Dihydrolipoamide dehydrogenase; APC62701, colwelli 92.26
3cgb_A480 Pyridine nucleotide-disulfide oxidoreductase, CLA; 92.2
3lk7_A451 UDP-N-acetylmuramoylalanine--D-glutamate ligase; a 92.15
2r9z_A463 Glutathione amide reductase; NAD, FAD, substrate s 91.96
1zmd_A474 Dihydrolipoyl dehydrogenase; lipoamide dehydrogena 91.89
2bc0_A490 NADH oxidase; flavoprotein, pyridine nucleotide di 91.79
1ojt_A482 Surface protein; redox-active center, glycolysis, 91.72
2a8x_A464 Dihydrolipoyl dehydrogenase, E3 component of alpha 91.66
1q1r_A431 Putidaredoxin reductase; glutathione reductase fol 91.65
3d1c_A369 Flavin-containing putative monooxygenase; NP_37310 91.55
3kd9_A449 Coenzyme A disulfide reductase; PSI-II, NYSGXRC, o 91.37
2hmt_A144 YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane 91.26
1dxl_A470 Dihydrolipoamide dehydrogenase; oxidoreductase, mu 91.22
3ef6_A410 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) 91.08
2q0l_A311 TRXR, thioredoxin reductase; bacterial thiredoxin 91.05
4eqs_A437 Coenzyme A disulfide reductase; oxidoreductase; HE 91.04
3ado_A319 Lambda-crystallin; L-gulonate 3-dehydrogenase, str 91.02
2hqm_A479 GR, grase, glutathione reductase; glutathione redu 90.83
1onf_A500 GR, grase, glutathione reductase; oxidoreductase; 90.76
1id1_A153 Putative potassium channel protein; RCK domain, E. 90.75
1fl2_A310 Alkyl hydroperoxide reductase subunit F; reactive 90.61
2qae_A468 Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystin 90.57
1zk7_A467 HGII, reductase, mercuric reductase; mercuric ION 90.33
3urh_A491 Dihydrolipoyl dehydrogenase; PSI-biology, structur 90.06
3c85_A183 Putative glutathione-regulated potassium-efflux S 90.01
1vdc_A333 NTR, NADPH dependent thioredoxin reductase; hypoth 90.0
2cdu_A452 NADPH oxidase; flavoenzyme, oxidoreductase; HET: F 89.92
3lxd_A415 FAD-dependent pyridine nucleotide-disulphide oxido 89.85
3fg2_P404 Putative rubredoxin reductase; ferredoxin reductas 89.83
2q7v_A325 Thioredoxin reductase; rossman fold, FAD, flavopro 89.82
3dk9_A478 Grase, GR, glutathione reductase; flavoenzyme, nic 89.79
3ntd_A565 FAD-dependent pyridine nucleotide-disulphide oxido 89.72
3l8k_A466 Dihydrolipoyl dehydrogenase; redox-active center, 89.72
1trb_A320 Thioredoxin reductase; oxidoreductase(flavoenzyme) 89.64
3i83_A320 2-dehydropantoate 2-reductase; structural genomics 89.55
2xve_A464 Flavin-containing monooxygenase; oxidoreductase; H 89.53
2a87_A335 TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TL 89.52
1f0y_A302 HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive 89.49
4e12_A283 Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 89.24
3oc4_A452 Oxidoreductase, pyridine nucleotide-disulfide FAM; 89.22
2zbw_A335 Thioredoxin reductase; redox protein, oxidoreducta 89.09
3gwf_A540 Cyclohexanone monooxygenase; flavoprotein biocatal 89.02
4b1b_A542 TRXR, thioredoxin reductase; oxidoreductase, FAD, 88.9
3itj_A338 Thioredoxin reductase 1; disulfide B flavoprotein, 88.78
1ks9_A291 KPA reductase;, 2-dehydropantoate 2-reductase; PAN 88.55
3hn2_A312 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str 88.53
3lad_A476 Dihydrolipoamide dehydrogenase; oxidoreductase; HE 88.49
4ap3_A549 Steroid monooxygenase; oxidoreductase, baeyer-vill 88.49
3l4b_C218 TRKA K+ channel protien TM1088B; potassium channel 88.44
3eag_A326 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME 88.44
3cty_A319 Thioredoxin reductase; FAD, oxidoreductase, flavin 88.35
2ew2_A316 2-dehydropantoate 2-reductase, putative; alpha-str 88.35
3uox_A545 Otemo; baeyer-villiger monooxygenase, oxidoreducta 88.34
2gv8_A447 Monooxygenase; FMO, FAD, NADPH, cofactor complex, 88.31
2wpf_A495 Trypanothione reductase; oxidoreductase, trypanoso 88.27
1fec_A490 Trypanothione reductase; redox-active center, oxid 88.26
3s5w_A463 L-ornithine 5-monooxygenase; class B flavin depend 88.25
3doj_A310 AT3G25530, dehydrogenase-like protein; gamma-hydro 88.2
3ics_A588 Coenzyme A-disulfide reductase; pyridine nucleotid 88.19
4dio_A405 NAD(P) transhydrogenase subunit alpha PART 1; stru 88.14
2dpo_A319 L-gulonate 3-dehydrogenase; structural genomics, N 88.1
1k0i_A394 P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, h 87.89
3dfz_A223 SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase 87.76
1zej_A293 HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural 87.76
2raf_A209 Putative dinucleotide-binding oxidoreductase; NP_7 87.65
1xdi_A499 RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno fun 87.59
3ces_A651 MNMG, tRNA uridine 5-carboxymethylaminomethyl modi 87.56
1mo9_A523 ORF3; nucleotide binding motifs, nucleotide bindin 87.55
2x8g_A598 Thioredoxin glutathione reductase; redox-active ce 87.54
1hyu_A521 AHPF, alkyl hydroperoxide reductase subunit F; thi 87.47
2y0c_A478 BCEC, UDP-glucose dehydrogenase; oxidoreductase, c 87.43
3ab1_A360 Ferredoxin--NADP reductase; oxidoreductase, electr 87.36
2vdc_G456 Glutamate synthase [NADPH] small chain; oxidoreduc 87.34
3f8d_A323 Thioredoxin reductase (TRXB-3); redox protein, nuc 87.31
3p2y_A381 Alanine dehydrogenase/pyridine nucleotide transhy; 87.23
3hwr_A318 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A 87.11
3k6j_A460 Protein F01G10.3, confirmed by transcript evidenc; 87.05
1lld_A319 L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N 86.83
3r9u_A315 Thioredoxin reductase; structural genomics, center 86.73
3dgz_A488 Thioredoxin reductase 2; oxidoreductase, rossmann, 86.71
3ghy_A335 Ketopantoate reductase protein; oxidoreductase, NA 86.57
3g17_A294 Similar to 2-dehydropantoate 2-reductase; structur 86.52
2zxi_A637 TRNA uridine 5-carboxymethylaminomethyl modificat 86.44
3gg2_A450 Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd 86.39
1x13_A401 NAD(P) transhydrogenase subunit alpha; NAD(H)-bind 86.35
3qfa_A519 Thioredoxin reductase 1, cytoplasmic; protein-prot 86.33
1pqv_S 309 STP-alpha, transcription elongation factor S-II, D 86.26
1kyq_A274 Met8P, siroheme biosynthesis protein Met8; homodim 86.04
3iwa_A472 FAD-dependent pyridine nucleotide-disulphide oxido 85.92
1zcj_A463 Peroxisomal bifunctional enzyme; peroxisomal multi 85.84
3pef_A287 6-phosphogluconate dehydrogenase, NAD-binding; gam 85.83
3dtt_A245 NADP oxidoreductase; structural genomics, joint ce 85.63
1z82_A335 Glycerol-3-phosphate dehydrogenase; TM0378, struct 85.59
1l7d_A384 Nicotinamide nucleotide transhydrogenase, subunit 85.58
3ego_A307 Probable 2-dehydropantoate 2-reductase; structural 85.55
4dna_A463 Probable glutathione reductase; structural genomic 85.42
2xag_A852 Lysine-specific histone demethylase 1; amine oxida 85.35
1bg6_A359 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L 85.33
3lzw_A332 Ferredoxin--NADP reductase 2; ferredoxin reductase 85.31
3k96_A356 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA 85.15
1pzg_A331 LDH, lactate dehydrogenase; apicomplexa, APAD, tet 85.1
3oj0_A144 Glutr, glutamyl-tRNA reductase; structural genomic 85.1
2hjr_A328 Malate dehydrogenase; malaria, structural genomics 85.03
3o0h_A484 Glutathione reductase; ssgcid, structur genomics, 85.02
4ffl_A363 PYLC; amino acid, biosynthesis of pyrrolysine, iso 84.7
3g0o_A303 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine 84.68
3g79_A478 NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; 84.58
3dgh_A483 TRXR-1, thioredoxin reductase 1, mitochondrial; ox 84.56
1pjc_A361 Protein (L-alanine dehydrogenase); oxidoreductase, 84.55
1txg_A335 Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid 84.51
2ewd_A317 Lactate dehydrogenase,; protein-substrate_cofactor 84.45
1cjc_A460 Protein (adrenodoxin reductase); flavoenzyme, MAD 84.44
4dll_A320 2-hydroxy-3-oxopropionate reductase; structural ge 84.25
4a7p_A446 UDP-glucose dehydrogenase; oxidoreductase, carbohy 84.15
3pdu_A287 3-hydroxyisobutyrate dehydrogenase family protein; 84.03
1m6i_A493 Programmed cell death protein 8; apoptosis, AIF, o 83.9
2vns_A215 Metalloreductase steap3; metal-binding, transmembr 83.79
1mv8_A436 GMD, GDP-mannose 6-dehydrogenase; rossman fold, do 83.52
2h78_A302 Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 83.51
2v6b_A304 L-LDH, L-lactate dehydrogenase; oxidoreductase, ra 83.29
3fbs_A297 Oxidoreductase; structural genomics, PSI2, MCSG, p 83.26
2qrj_A394 Saccharopine dehydrogenase, NAD+, L-lysine- formin 83.15
3qha_A296 Putative oxidoreductase; seattle structural genomi 83.06
2eez_A369 Alanine dehydrogenase; TTHA0216, structural genomi 83.03
1nyt_A271 Shikimate 5-dehydrogenase; alpha/beta domains, WID 82.85
3mog_A483 Probable 3-hydroxybutyryl-COA dehydrogenase; struc 82.19
2vhw_A377 Alanine dehydrogenase; NAD, secreted, oxidoreducta 82.03
3vtf_A444 UDP-glucose 6-dehydrogenase; two discrete alpha/be 82.01
1t2d_A322 LDH-P, L-lactate dehydrogenase; ternary complex, o 82.0
2wtb_A725 MFP2, fatty acid multifunctional protein (ATMFP2); 81.66
4ezb_A317 Uncharacterized conserved protein; structural geno 81.62
1guz_A310 Malate dehydrogenase; oxidoreductase, tricarboxyli 81.45
3pid_A432 UDP-glucose 6-dehydrogenase; rossmann fold, oxidor 81.42
3l6d_A306 Putative oxidoreductase; structural genomics, prot 81.27
3tl2_A315 Malate dehydrogenase; center for structural genomi 81.08
2qyt_A317 2-dehydropantoate 2-reductase; APC81190, porphyrom 81.01
1ur5_A309 Malate dehydrogenase; oxidoreductase, tricarboxyli 81.01
4a9w_A357 Monooxygenase; baeyer-villiger, FAD, oxidoreductas 80.9
1yj8_A375 Glycerol-3-phosphate dehydrogenase; SGPP, structur 80.62
4huj_A220 Uncharacterized protein; PSI-biology, nysgrc, stru 80.61
1o94_A729 Tmadh, trimethylamine dehydrogenase; electron tran 80.59
2uyy_A316 N-PAC protein; long-chain dehydrogenase, cytokine; 80.49
1jay_A212 Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma 80.49
1dlj_A402 UDP-glucose dehydrogenase; rossmann fold, ternary 80.35
2a9f_A398 Putative malic enzyme ((S)-malate:NAD+ oxidoreduct 80.35
4e21_A358 6-phosphogluconate dehydrogenase (decarboxylating; 80.12
3phh_A269 Shikimate dehydrogenase; shikimate pathway, helico 80.07
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A Back     alignment and structure
Probab=100.00  E-value=2.8e-62  Score=625.95  Aligned_cols=571  Identities=39%  Similarity=0.646  Sum_probs=439.5

Q ss_pred             ccccccceeccCcccccCchhhcchhHHHhcCCCc-cchhhhhhHHHHhhcCCCccCCcccccCCCCCCCCCCCChhhHH
Q 046008          605 ENTGAAAVAVGLKARAAGPIERIKFKEILKRRGGL-QEYLECRNQILSLWSGDVGRILPLTECGVSDTPLGDEPSRASLI  683 (1624)
Q Consensus       605 ~~~~~aa~~~~l~~~~~~~~e~~~~~~~~~~~~~~-~~~l~~rn~~l~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~  683 (1624)
                      .++|+||+++||++++|+++|..+|||++++.+.. ..||+|||+||+||.+||...++.+.|.++...+.+  .....|
T Consensus         1 ~~~~~aa~~~~l~~~~l~~~E~~~~~~~~~~~~~~~~~yl~irn~~~~~w~~~~~~~~~~~~~~~~~~r~~~--~~~~~i   78 (662)
T 2z3y_A            1 SGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYN--SDTVLV   78 (662)
T ss_dssp             CHHHHHHHHTTCCTTSCCHHHHHHCHHHHTSCHHHHHHHHHHHHHHHHHHHTCTTBCCCHHHHHHHSCTTGG--GCHHHH
T ss_pred             ChHHHHHHHcCCCCCCCCHHHHHHhHHHHcCchHHHHHHHHHHHHHHHHHHHCCCcccCHHHHHHhcCCCcc--CChHHH
Confidence            36899999999999999999999999999997655 489999999999999999999999999988876655  344689


Q ss_pred             HHHHHhhcccCceeeecCCCCcccCCCCcchhhHHhhhhhccccCCcccccccceeeeecccccccccccccCccccCCC
Q 046008          684 REIYKFLDQSGYINVGIASTKEKADHNAKHSYKLLKEERLEKSSGASIADSEDGVAFILGQIKSSETTTEAKHGVECNDG  763 (1624)
Q Consensus       684 ~~~~~~l~~~g~in~g~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  763 (1624)
                      +.++.|+.++|+||+|+..+.                                                       .   
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------~---  100 (662)
T 2z3y_A           79 HRVHSYLERHGLINFGIYKRI-------------------------------------------------------K---  100 (662)
T ss_dssp             HHHHHHHHHTTSSSCSSCBCS-------------------------------------------------------S---
T ss_pred             HHHHHHHHHHHHHhcCCcccc-------------------------------------------------------C---
Confidence            999999999999998874211                                                       0   


Q ss_pred             CcccccccCCCCCCCCCchhhhhhhhhhhhccccCCCccccccccccccccCCCCccccccCCCcCChhcccccchhhhh
Q 046008          764 NQQIGIKTGGSMTPELPNEIRQKESVVDDCQQRVDSDPKASNRLVGVDVSCDDPSCGMVDGGTVPLTIEERSESERVQSA  843 (1624)
Q Consensus       764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~d~~~~~~~c~~v~~~r~~l~p~~~~~~~~~~~~  843 (1624)
                                                          |                                           
T Consensus       101 ------------------------------------~-------------------------------------------  101 (662)
T 2z3y_A          101 ------------------------------------P-------------------------------------------  101 (662)
T ss_dssp             ------------------------------------C-------------------------------------------
T ss_pred             ------------------------------------C-------------------------------------------
Confidence                                                0                                           


Q ss_pred             hhhhcCCCCccccCCCCCCcEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeeccccc
Q 046008          844 SCDDAGENHYLRCDIDVKKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEA  923 (1624)
Q Consensus       844 ~~~~~~~~~~~~~~~~~~~~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~  923 (1624)
                                  .+....++|+|||||++||+||++|+++|++|+|||+++++||+++++.. .++.+|+|++|+++...
T Consensus       102 ------------~~~~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~-~~~~~~~G~~~~~~~~~  168 (662)
T 2z3y_A          102 ------------LPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRK-GNYVADLGAMVVTGLGG  168 (662)
T ss_dssp             ------------CCSSCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEE-TTEEEESSCCEECCSBT
T ss_pred             ------------CcccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccc-cCchhhcCcEEEeCCCC
Confidence                        00123578999999999999999999999999999999999999999886 48899999999987632


Q ss_pred             chhhhccCCcHHHHHHHhCCceeeecCCCCeeeccCCcccCcchHHHHHHHHHHHHHHHHHHHHHhhh---hhhhccHHH
Q 046008          924 DVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLDDMVLLVAQKGE---HAMKMSLED 1000 (1624)
Q Consensus       924 ~v~~~~~~nPl~~LlkeLGLel~~l~~~~~~yd~~~Gk~vp~~l~~~l~~~~~slld~l~~~~~~~g~---~a~~~sled 1000 (1624)
                              +++..+.+++|+++..+...+..|. .+|..++..........+..++..+..+......   .....++.+
T Consensus       169 --------~~~~~l~~~l~~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  239 (662)
T 2z3y_A          169 --------NPMAVVSKQVNMELAKIKQKCPLYE-ANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQ  239 (662)
T ss_dssp             --------CHHHHHHHHHTCCEEECCSCCCEEC-TTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEETTEECBHHH
T ss_pred             --------chHHHHHHHhCcchhcccccceEEe-CCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccCCCCCCHHH
Confidence                    5677899999998776655554444 4666666554444444555544444322211000   000111222


Q ss_pred             HHHHHH----------------H--------------H----HHHhhccCCccccc-----ccc---------------h
Q 046008         1001 GLEYAL----------------K--------------R----RRMARLGRGREDAS-----MHN---------------S 1026 (1624)
Q Consensus      1001 ~Le~~l----------------k--------------~----~r~~~~~~~~~~~~-----~~~---------------a 1026 (1624)
                      .++...                .              .    ..+......+..+.     ...               .
T Consensus       240 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~l~~~  319 (662)
T 2z3y_A          240 ALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTAL  319 (662)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhhHHHH
Confidence            111100                0              0    00000000000000     000               0


Q ss_pred             hhHhhcc-----------cCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccccccccccCCCCCcc
Q 046008         1027 MDVYSKT-----------SSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAH 1095 (1624)
Q Consensus      1027 ~d~fs~~-----------~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~~~~~~~y~g~~G~~ 1095 (1624)
                      ...|...           ..+...     .....++++..+.+++|++.+++++++..+..+++..|.++..| .+.|.+
T Consensus       320 ~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~-~~~g~~  393 (662)
T 2z3y_A          320 CKEYDELAETQGKLEEKLQELEAN-----PPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDF-EFTGSH  393 (662)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHTTS-----CCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGG-CCBSCC
T ss_pred             HhhhhhhhhhhhhHHHHHHHhhcc-----CcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCccc-ccCCce
Confidence            0000000           000000     00112367888899999999999988889999999888766444 356788


Q ss_pred             ccccchHHHHHHHHhhhccccccceEEEEEecCCCCCCCCCCCcEEEEeCC------CcEEEcCEEEEccChhhhhh--h
Q 046008         1096 CMIKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSN------GSEFSGDAVLITVPLGCLKA--E 1167 (1624)
Q Consensus      1096 ~~VkGGm~sLveALAe~L~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~Tad------Geti~AD~VIsAiP~~vLk~--~ 1167 (1624)
                      +.++|||++|+++|+++++|++|++|++|.+.         +++|.|++.+      |.++.||+||+|+|+++|+.  .
T Consensus       394 ~~~~gG~~~l~~~La~~l~I~l~~~V~~I~~~---------~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~  464 (662)
T 2z3y_A          394 LTVRNGYSCVPVALAEGLDIKLNTAVRQVRYT---------ASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP  464 (662)
T ss_dssp             EEETTCTTHHHHHHTTTCEEETTEEEEEEEEE---------TTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred             eeecCcHHHHHHHHHhcCceecCCeEEEEEEC---------CCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence            99999999999999999999999999999983         5578888766      67899999999999999986  4


Q ss_pred             cccCCCCCcHHHHHHHHhcCCccEEEEEEEeCCccccCCCccccccccccCCCCceeEEeccccCCCCcEEEEEEeCccc
Q 046008         1168 SIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKETDLRGRCFMFWNVRKTVGAPVLIALVVGKAA 1247 (1624)
Q Consensus      1168 ~I~F~P~LP~~k~qAI~~L~yg~l~KV~L~F~~~fW~~~~~~fG~~~~~~~~rg~~~~~~n~~ap~G~~vLvayv~G~~A 1247 (1624)
                      .|.|.|+||+++.++|++++|++++||+|.|+++||+.+..+||........++.++++|+..   +.++|++|+.|..+
T Consensus       465 ~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a  541 (662)
T 2z3y_A          465 AVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAA  541 (662)
T ss_dssp             SSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHH
T ss_pred             ceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhH
Confidence            578999999999999999999999999999999999987778887654444556677888764   56799999999999


Q ss_pred             cccCCCCHHHHHHHHHHHHHHHhCCCCCCCCceEEEeecCCCCCCcccccccCCCCCCchhhhhCCccC-----------
Q 046008         1248 VDGQNVSPSDHVNHAVMVLRQIFGAASVPDPVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPVE----------- 1316 (1624)
Q Consensus      1248 ~~~e~lSdEElie~aL~~L~kIfG~~~vpdPi~ivvtrW~~dp~s~GsYs~~~pG~~~~~~d~L~tPV~----------- 1316 (1624)
                      ..+..++++++++.++++|+++||....++|..+.+++|.++||++|+|++++||+...+++.+++|+.           
T Consensus       542 ~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~  621 (662)
T 2z3y_A          542 GIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQP  621 (662)
T ss_dssp             HHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------C
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCC
Confidence            999999999999999999999999876789999999999999999999999999998888888888873           


Q ss_pred             -CeEEEecCCccCCCCCcHHHHHHHHHHHHHHHHHHHcc
Q 046008         1317 -NCLFFAGEATCKEHPDTVGGAMLSGLREAVRIIDILTT 1354 (1624)
Q Consensus      1317 -grLyFAGEaTs~~~~GtVEGAi~SGiRAA~~IL~~L~~ 1354 (1624)
                       +|||||||||+..|+||||||+.||+|||.+|+..+.+
T Consensus       622 ~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g  660 (662)
T 2z3y_A          622 IPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG  660 (662)
T ss_dssp             CCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred             CCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence             46999999999989999999999999999999999874



>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Back     alignment and structure
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A* Back     alignment and structure
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A* Back     alignment and structure
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ... Back     alignment and structure
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A* Back     alignment and structure
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A* Back     alignment and structure
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G* Back     alignment and structure
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A* Back     alignment and structure
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A* Back     alignment and structure
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A* Back     alignment and structure
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis} Back     alignment and structure
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A* Back     alignment and structure
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A* Back     alignment and structure
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5 Back     alignment and structure
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum} Back     alignment and structure
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei} Back     alignment and structure
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis} Back     alignment and structure
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A* Back     alignment and structure
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens} Back     alignment and structure
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus} Back     alignment and structure
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens} Back     alignment and structure
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A* Back     alignment and structure
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A* Back     alignment and structure
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis} Back     alignment and structure
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7 Back     alignment and structure
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A* Back     alignment and structure
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G* Back     alignment and structure
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A* Back     alignment and structure
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} Back     alignment and structure
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A Back     alignment and structure
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7} Back     alignment and structure
>2dce_A KIAA1915 protein; swirm domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18 Back     alignment and structure
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum} Back     alignment and structure
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis} Back     alignment and structure
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP} Back     alignment and structure
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A* Back     alignment and structure
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A* Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens} Back     alignment and structure
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A* Back     alignment and structure
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii} Back     alignment and structure
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens} Back     alignment and structure
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A* Back     alignment and structure
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus} Back     alignment and structure
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A* Back     alignment and structure
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A* Back     alignment and structure
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus} Back     alignment and structure
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A* Back     alignment and structure
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A* Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti} Back     alignment and structure
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces} Back     alignment and structure
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces} Back     alignment and structure
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A* Back     alignment and structure
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae} Back     alignment and structure
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans} Back     alignment and structure
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A* Back     alignment and structure
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B* Back     alignment and structure
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli} Back     alignment and structure
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2 Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus} Back     alignment and structure
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1 Back     alignment and structure
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A* Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A* Back     alignment and structure
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A* Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae} Back     alignment and structure
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa} Back     alignment and structure
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A* Back     alignment and structure
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A* Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C* Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A* Back     alignment and structure
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida} Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6 Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A* Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A* Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A* Back     alignment and structure
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A* Back     alignment and structure
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa} Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A* Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A* Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7 Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A* Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1} Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A* Back     alignment and structure
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A* Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A* Back     alignment and structure
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A* Back     alignment and structure
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii} Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A* Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A* Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ... Back     alignment and structure
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A* Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii} Back     alignment and structure
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A* Back     alignment and structure
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ... Back     alignment and structure
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A* Back     alignment and structure
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A* Back     alignment and structure
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina} Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A* Back     alignment and structure
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum} Back     alignment and structure
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A* Back     alignment and structure
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A* Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A* Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A* Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas} Back     alignment and structure
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A* Back     alignment and structure
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A* Back     alignment and structure
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A* Back     alignment and structure
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A* Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A* Back     alignment and structure
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti} Back     alignment and structure
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A* Back     alignment and structure
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae} Back     alignment and structure
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A* Back     alignment and structure
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A* Back     alignment and structure
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A* Back     alignment and structure
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A* Back     alignment and structure
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii} Back     alignment and structure
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A* Back     alignment and structure
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1 Back     alignment and structure
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp} Back     alignment and structure
>2xpp_A IWS1, ECU08_0440; transcription, elongation, histone chaperone, RNA polymerase mRNA export; 1.74A {Encephalitozoon cuniculi} PDB: 2xpo_A 2xpn_A 2xpl_A Back     alignment and structure
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A* Back     alignment and structure
>3nfq_A Transcription factor IWS1; SPN1, RNA polymerase II; 1.85A {Saccharomyces cerevisiae} PDB: 3o8z_A 3oak_A Back     alignment and structure
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum} Back     alignment and structure
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* Back     alignment and structure
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A* Back     alignment and structure
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A* Back     alignment and structure
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A* Back     alignment and structure
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A* Back     alignment and structure
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Back     alignment and structure
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A* Back     alignment and structure
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A* Back     alignment and structure
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 Back     alignment and structure
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A* Back     alignment and structure
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A* Back     alignment and structure
>1wjt_A Transcription elongation factor S-II protein 3; four-helix bundle, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.48.3.1 Back     alignment and structure
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Back     alignment and structure
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Back     alignment and structure
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea} Back     alignment and structure
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A* Back     alignment and structure
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} Back     alignment and structure
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A* Back     alignment and structure
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A* Back     alignment and structure
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A* Back     alignment and structure
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A* Back     alignment and structure
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A* Back     alignment and structure
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A* Back     alignment and structure
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus} Back     alignment and structure
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Back     alignment and structure
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A* Back     alignment and structure
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A* Back     alignment and structure
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A* Back     alignment and structure
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* Back     alignment and structure
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 Back     alignment and structure
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Back     alignment and structure
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 Back     alignment and structure
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi} Back     alignment and structure
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A* Back     alignment and structure
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti} Back     alignment and structure
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A* Back     alignment and structure
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis} Back     alignment and structure
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans} Back     alignment and structure
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris} Back     alignment and structure
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans} Back     alignment and structure
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ... Back     alignment and structure
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A* Back     alignment and structure
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A* Back     alignment and structure
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} Back     alignment and structure
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A* Back     alignment and structure
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis} Back     alignment and structure
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* Back     alignment and structure
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* Back     alignment and structure
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis} Back     alignment and structure
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus} Back     alignment and structure
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A* Back     alignment and structure
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum} Back     alignment and structure
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A* Back     alignment and structure
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* Back     alignment and structure
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} Back     alignment and structure
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A* Back     alignment and structure
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A* Back     alignment and structure
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} Back     alignment and structure
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} Back     alignment and structure
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum} Back     alignment and structure
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} Back     alignment and structure
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A* Back     alignment and structure
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A* Back     alignment and structure
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A* Back     alignment and structure
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A* Back     alignment and structure
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A* Back     alignment and structure
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Back     alignment and structure
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} Back     alignment and structure
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ... Back     alignment and structure
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} Back     alignment and structure
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} Back     alignment and structure
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1 Back     alignment and structure
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A Back     alignment and structure
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A* Back     alignment and structure
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A* Back     alignment and structure
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A Back     alignment and structure
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* Back     alignment and structure
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum} Back     alignment and structure
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense} Back     alignment and structure
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A* Back     alignment and structure
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} Back     alignment and structure
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} Back     alignment and structure
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} Back     alignment and structure
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Back     alignment and structure
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni} Back     alignment and structure
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A* Back     alignment and structure
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} Back     alignment and structure
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A* Back     alignment and structure
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} Back     alignment and structure
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* Back     alignment and structure
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A* Back     alignment and structure
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A Back     alignment and structure
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1 Back     alignment and structure
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris} Back     alignment and structure
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} Back     alignment and structure
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Back     alignment and structure
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} Back     alignment and structure
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} Back     alignment and structure
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* Back     alignment and structure
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} Back     alignment and structure
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti} Back     alignment and structure
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A Back     alignment and structure
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 Back     alignment and structure
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A* Back     alignment and structure
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} Back     alignment and structure
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Back     alignment and structure
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Back     alignment and structure
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Back     alignment and structure
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae} Back     alignment and structure
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* Back     alignment and structure
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Back     alignment and structure
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} Back     alignment and structure
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A* Back     alignment and structure
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A Back     alignment and structure
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 Back     alignment and structure
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Back     alignment and structure
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A* Back     alignment and structure
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Back     alignment and structure
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} Back     alignment and structure
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Back     alignment and structure
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A* Back     alignment and structure
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Back     alignment and structure
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* Back     alignment and structure
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Back     alignment and structure
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens} Back     alignment and structure
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A* Back     alignment and structure
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Back     alignment and structure
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} Back     alignment and structure
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 Back     alignment and structure
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} Back     alignment and structure
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* Back     alignment and structure
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} Back     alignment and structure
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Back     alignment and structure
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Back     alignment and structure
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Back     alignment and structure
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* Back     alignment and structure
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Back     alignment and structure
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Back     alignment and structure
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} Back     alignment and structure
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Back     alignment and structure
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia} Back     alignment and structure
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} Back     alignment and structure
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Back     alignment and structure
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Back     alignment and structure
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* Back     alignment and structure
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} Back     alignment and structure
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} Back     alignment and structure
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1624
d2dw4a2449 c.3.1.2 (A:274-654,A:764-831) Lysine-specific hist 1e-51
d2v5za1383 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {H 1e-41
d1b5qa1347 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Mai 6e-35
d1b5qa1347 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Mai 1e-05
d2dw4a3109 d.16.1.5 (A:655-763) Lysine-specific histone demet 8e-32
d1seza1373 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen ox 3e-28
d2iida1370 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {M 2e-27
d1b5qa2112 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea 2e-26
d2ivda1347 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen ox 6e-25
d2v5za2112 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (H 7e-25
d2iida2113 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan 5e-23
d2dw4a1102 a.4.1.18 (A:172-273) Lysine-specific histone demet 3e-21
d2bi7a1314 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mu 2e-16
d1i8ta1298 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mu 4e-16
d2fq3a185 a.4.1.18 (A:311-395) Transcription regulatory prot 5e-16
d2bcgg1297 c.3.1.3 (G:5-301) Guanine nucleotide dissociation 2e-15
d1d5ta1336 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide di 6e-15
d2gv8a1335 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox 1e-12
d1w4xa1298 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxy 4e-12
d2voua1265 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydr 3e-10
d2i0za1251 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {B 5e-10
d1cjca2230 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase 7e-10
d1gtea4196 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine de 1e-09
d2gqfa1253 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein H 1e-09
d1k0ia1292 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydr 2e-09
d1c0pa1268 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxida 2e-09
d1v59a1233 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehyd 2e-09
d2gf3a1281 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bac 3e-09
d1ryia1276 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO { 3e-09
d1lqta2239 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reduct 3e-09
d1dxla1221 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehyd 8e-09
d1ojta1229 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide deh 1e-08
d1y0pa2308 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 ( 3e-08
d1onfa1259 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase 3e-08
d1rp0a1278 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi 4e-08
d1kifa1246 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N 6e-08
d1d4ca2322 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 ( 7e-08
d1qo8a2317 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 ( 1e-07
d1ebda1223 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehyd 1e-07
d3lada1229 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehyd 2e-07
d2gjca1311 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Th 2e-07
d3c96a1288 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Ps 2e-07
d1lvla1220 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehyd 3e-07
d1gesa1217 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase 4e-07
d1vdca1192 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase 6e-07
d2gmha1380 c.3.1.2 (A:4-236,A:336-482) Electron transfer flav 7e-07
d3grsa1221 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase 7e-07
d1h6va1235 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin 8e-07
d1trba1190 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase 8e-07
d1fcda1186 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulf 8e-07
d1fl2a1184 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide 1e-06
d1pj5a2305 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine ox 1e-06
d1xdia1233 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehyd 2e-06
d2bs2a2336 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wo 3e-06
d1d7ya1183 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredo 3e-06
d1mo9a1261 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketop 4e-06
d1ps9a3179 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA redu 9e-06
d1q1ra1185 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductas 9e-06
d1pn0a1360 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {So 1e-05
d2f5va1379 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {W 3e-05
d1xhca1167 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite 3e-05
d1nhpa1198 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enter 3e-05
d1n4wa1367 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of 4e-05
d3coxa1370 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of 4e-05
d1neka2330 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase 5e-05
d1jnra2356 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reduct 8e-05
d1chua2305 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {E 1e-04
d1aoga1238 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductas 2e-04
d1m6ia1213 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing f 3e-04
d1feca1240 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductas 4e-04
d2cula1230 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {T 4e-04
d1djqa2156 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, 5e-04
d1kdga1360 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain 5e-04
d1d7ya2121 c.3.1.5 (A:116-236) NADH-dependent ferredoxin redu 8e-04
d1gpea1391 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penic 0.002
d1kf6a2311 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Es 0.002
d1e5qa1182 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase 0.002
d2hmva1134 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [T 0.003
d1cf3a1385 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Asper 0.003
d2jfga193 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D- 0.003
d1djqa3233 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehyd 0.003
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 449 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  187 bits (473), Expect = 1e-51
 Identities = 107/505 (21%), Positives = 174/505 (34%), Gaps = 79/505 (15%)

Query: 861  KKRIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITG 920
              ++I+IG+G +GL AAR LQ  G  VT+LEAR+R+GGRV T R   +   DLGA ++TG
Sbjct: 5    TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTG 63

Query: 921  VEADVATERRADPSSLVCAQLGLELTVLNSDCPLYDIVSGQKVPANVDEALEAEFNSLLD 980
            +  +            V  Q+ +EL  +   CPLY+  +GQ VP   DE +E EFN LL+
Sbjct: 64   LGGNPMAV--------VSKQVNMELAKIKQKCPLYE-ANGQAVPKEKDEMVEQEFNRLLE 114

Query: 981  DMVLLVAQKGEHAMK---MSLEDGLEYALKRRRMARLGRGREDASMHNSMDVYSKTSSVD 1037
                L  Q   + +    +SL   LE  ++ +                            
Sbjct: 115  ATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQE--------------------------- 147

Query: 1038 SRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPFWNQDDVYGGFGGAHCM 1097
                 K    E I    +          L      L +++        +           
Sbjct: 148  -----KHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDIT 202

Query: 1098 IKGGYSTVVEALGKELLIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLI 1157
             +    +    L               +   +  +L++ Q +++             V +
Sbjct: 203  AEFLVKSKHRDL--------------TALCKEYDELAETQGKLEEKLQELEANPPSDVYL 248

Query: 1158 TVPLGCLKAESIMFSPPLPQWKYSAIQRLGFGVLNKVVLEFAEVFWDDTVDYFGATAKET 1217
            +     +                S +    +   +      + +   +          E 
Sbjct: 249  SSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEG 308

Query: 1218 DLRGRCFMFWNVRKTVGAPVLIALVVGKAAVDGQNVSPSDHVNHAVMVLRQIFGAASVPD 1277
                       VR T     +IA+     +        +      + VL+Q   A     
Sbjct: 309  LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA----V 364

Query: 1278 PVASVVTDWGRDPFSYGAYSYVATGASGEDYDILGRPV------------ENCLFFAGEA 1325
                 + +W          +    G+SG DYD++ +P+               LFFAGE 
Sbjct: 365  QFVPPLPEWKTSAVQRMVAA----GSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEH 420

Query: 1326 TCKEHPDTVGGAMLSGLREAVRIID 1350
            T + +P TV GA+LSGLREA RI D
Sbjct: 421  TIRNYPATVHGALLSGLREAGRIAD 445


>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 383 Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 347 Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 347 Back     information, alignment and structure
>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109 Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 373 Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 370 Back     information, alignment and structure
>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Length = 112 Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Length = 347 Back     information, alignment and structure
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Length = 112 Back     information, alignment and structure
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 113 Back     information, alignment and structure
>d2dw4a1 a.4.1.18 (A:172-273) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Length = 102 Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Length = 314 Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 298 Back     information, alignment and structure
>d2fq3a1 a.4.1.18 (A:311-395) Transcription regulatory protein swi3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 85 Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 297 Back     information, alignment and structure
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]} Length = 336 Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335 Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Length = 298 Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Length = 265 Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Length = 251 Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Length = 230 Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Length = 196 Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Length = 253 Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Length = 292 Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Length = 268 Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 233 Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Length = 281 Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Length = 276 Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Length = 239 Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Length = 221 Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Length = 229 Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 308 Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Length = 259 Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Length = 278 Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Length = 246 Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Length = 322 Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Length = 317 Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 223 Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Length = 229 Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 311 Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Length = 288 Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 220 Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Length = 217 Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 192 Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Length = 380 Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 235 Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Length = 190 Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Length = 186 Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Length = 184 Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Length = 305 Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 233 Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Length = 336 Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Length = 183 Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Length = 261 Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Length = 179 Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Length = 185 Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Length = 360 Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Length = 379 Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Length = 167 Back     information, alignment and structure
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Length = 198 Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Length = 367 Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Length = 370 Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Length = 330 Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 356 Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Length = 305 Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Length = 238 Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Length = 213 Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Length = 240 Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Length = 230 Back     information, alignment and structure
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Length = 156 Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 360 Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Length = 121 Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Length = 391 Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Length = 311 Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182 Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Length = 134 Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Length = 385 Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Length = 93 Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Length = 233 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1624
d2v5za1383 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 99.95
d2dw4a2449 Lysine-specific histone demethylase 1, LSD1 {Human 99.95
d1b5qa1347 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 99.94
d2iida1370 L-aminoacid oxidase {Malayan pit viper (Calloselas 99.93
d1seza1373 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 99.87
d2dw4a1102 Lysine-specific histone demethylase 1, LSD1 {Human 99.85
d2ivda1347 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 99.82
d2bcgg1297 Guanine nucleotide dissociation inhibitor, GDI {Ba 99.74
d1d5ta1336 Guanine nucleotide dissociation inhibitor, GDI {Co 99.65
d2bi7a1314 UDP-galactopyranose mutase, N-terminal domain {Kle 99.54
d2fq3a185 Transcription regulatory protein swi3 {Baker's yea 99.46
d2v5za2112 Monoamine oxidase B {Human (Homo sapiens) [TaxId: 99.43
d2dw4a3109 Lysine-specific histone demethylase 1, LSD1 {Human 99.42
d1i8ta1298 UDP-galactopyranose mutase, N-terminal domain {Esc 99.37
d1b5qa2112 Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} 99.36
d2iida2113 L-aminoacid oxidase {Malayan pit viper (Calloselas 99.15
d1ps9a3179 2,4-dienoyl-CoA reductase, middle domain {Escheric 99.08
d2gf3a1281 Sarcosine oxidase {Bacillus sp., strain b0618 [Tax 99.04
d2i0za1251 Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] 98.92
d2gv8a1335 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 98.87
d1ryia1276 Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} 98.85
d1w4xa1298 Phenylacetone monooxygenase {Thermobifida fusca [T 98.83
d2gqfa1253 Hypothetical protein HI0933 {Haemophilus influenza 98.81
d2voua1265 Dihydroxypyridine hydroxylase DhpH {Arthrobacter n 98.76
d1pj5a2305 N,N-dimethylglycine oxidase {Arthrobacter globifor 98.71
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 98.65
d1lqta2239 Ferredoxin:NADP reductase FprA {Mycobacterium tube 98.51
d1gtea4196 Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su 98.42
d1cjca2230 Adrenodoxin reductase of mitochondrial p450 system 98.41
d1v59a1233 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 98.28
d1dxla1221 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 98.25
d1c0pa1268 D-aminoacid oxidase, N-terminal domain {Rhodotorul 98.23
d1rp0a1278 Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara 98.19
d1ojta1229 Dihydrolipoamide dehydrogenase {Neisseria meningit 98.16
d3lada1229 Dihydrolipoamide dehydrogenase {Azotobacter vinela 98.1
d2gjca1311 Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( 98.07
d2gmha1380 Electron transfer flavoprotein-ubiquinone oxidored 98.05
d1gesa1217 Glutathione reductase {Escherichia coli [TaxId: 56 98.03
d1y0pa2308 Flavocytochrome c3 (respiratory fumarate reductase 97.96
d1fl2a1184 Alkyl hydroperoxide reductase subunit F (AhpF), C- 97.95
d3c96a1288 Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 97.93
d1trba1190 Thioredoxin reductase {Escherichia coli [TaxId: 56 97.9
d2ivda2108 Protoporphyrinogen oxidase {Myxococcus xanthus [Ta 97.89
d1d4ca2322 Flavocytochrome c3 (respiratory fumarate reductase 97.84
d1ebda1223 Dihydrolipoamide dehydrogenase {Bacillus stearothe 97.82
d1h6va1235 Mammalian thioredoxin reductase {Rat (Rattus norve 97.81
d1k0ia1292 p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a 97.81
d1vg0a1491 Rab escort protein 1 {Rat (Rattus norvegicus) [Tax 97.8
d3grsa1221 Glutathione reductase {Human (Homo sapiens) [TaxId 97.79
d1seza2112 Protoporphyrinogen oxidase {Tobacco (Nicotiana tab 97.76
d1onfa1259 Glutathione reductase {Plasmodium falciparum [TaxI 97.75
d1qo8a2317 Flavocytochrome c3 (respiratory fumarate reductase 97.74
d1vdca1192 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 97.73
d2bs2a2336 Fumarate reductase {Wolinella succinogenes [TaxId: 97.72
d1lvla1220 Dihydrolipoamide dehydrogenase {Pseudomonas putida 97.72
d1mo9a1261 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 97.66
d1pn0a1360 Phenol hydroxylase {Soil-living yeast (Trichosporo 97.66
d2f5va1379 Pyranose 2-oxidase {White-rot fungus (Peniophora s 97.62
d2cula1230 GidA-related protein TTHA1897 {Thermus thermophilu 97.57
d1aoga1238 Trypanothione reductase {Trypanosoma cruzi [TaxId: 97.55
d1chua2305 L-aspartate oxidase {Escherichia coli [TaxId: 562] 97.5
d1kifa1246 D-aminoacid oxidase, N-terminal domain {Pig (Sus s 97.46
d1feca1240 Trypanothione reductase {Crithidia fasciculata [Ta 97.44
d1neka2330 Succinate dehydogenase {Escherichia coli [TaxId: 5 97.43
d1ebda2117 Dihydrolipoamide dehydrogenase {Bacillus stearothe 97.43
d1jnra2356 Adenylylsulfate reductase A subunit {Archaeon Arch 97.38
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 97.33
d1xdia1233 Dihydrolipoamide dehydrogenase {Mycobacterium tube 97.32
d3coxa1370 Cholesterol oxidase of GMC family {Brevibacterium 97.26
d1lvla2115 Dihydrolipoamide dehydrogenase {Pseudomonas putida 97.25
d1n4wa1367 Cholesterol oxidase of GMC family {Streptomyces sp 97.24
d1nhpa2123 NADH peroxidase {Enterococcus faecalis [TaxId: 135 97.21
d1d7ya2121 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 97.2
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 97.15
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 97.14
d1fcda1186 Flavocytochrome c sulfide dehydrogenase, FCSD, fla 97.08
d1v59a2122 Dihydrolipoamide dehydrogenase {Baker's yeast (Sac 97.06
d1xhca2122 NADH oxidase /nitrite reductase {Pyrococcus furios 97.06
d3grsa2125 Glutathione reductase {Human (Homo sapiens) [TaxId 96.93
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 96.9
d1kdga1360 Flavoprotein domain of flavocytochrome cellobiose 96.9
d1kf6a2311 Fumarate reductase {Escherichia coli [TaxId: 562]} 96.89
d1dxla2123 Dihydrolipoamide dehydrogenase {Garden pea (Pisum 96.74
d2jfga193 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase 96.68
d1mo9a2121 NADH-dependent 2-ketopropyl coenzyme M oxidoreduct 96.66
d1h6va2122 Mammalian thioredoxin reductase {Rat (Rattus norve 96.64
d1ojta2125 Dihydrolipoamide dehydrogenase {Neisseria meningit 96.59
d1gpea1391 Glucose oxidase {Penicillium amagasakiense [TaxId: 96.47
d1cf3a1385 Glucose oxidase {Aspergillus niger [TaxId: 5061]} 96.39
d1bg6a2184 N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A 96.38
d1e5qa1182 Saccharopine reductase {Rice blast fungus (Magnapo 96.22
d1q1ra1185 Putidaredoxin reductase {Pseudomonas putida [TaxId 96.13
d1xhca1167 NADH oxidase /nitrite reductase {Pyrococcus furios 96.08
d1nhpa1198 NADH peroxidase {Enterococcus faecalis [TaxId: 135 96.08
d1ju2a1351 Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI 96.04
d1d7ya1183 NADH-dependent ferredoxin reductase, BphA4 {Pseudo 96.03
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 95.93
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 95.77
d1ks9a2167 Ketopantoate reductase PanE {Escherichia coli [Tax 95.41
d1m6ia2137 Apoptosis-inducing factor (AIF) {Human (Homo sapie 95.14
d1m6ia1213 Apoptosis-inducing factor (AIF) {Human (Homo sapie 95.0
d1f0ya2192 Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum 94.7
d1djqa2156 Trimethylamine dehydrogenase, C-terminal domain {M 94.69
d1wdka3186 Fatty oxidation complex alpha subunit, middle doma 94.08
d1wjta_103 Transcription elongation factor S-II protein 3 {Mo 94.02
d1eo0a_77 Transcription elongation factor TFIIS N-domain {Ba 93.95
d1pjca1168 L-alanine dehydrogenase {Phormidium lapideum [TaxI 93.76
d1mv8a2202 GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos 93.48
d1lssa_132 Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax 93.39
d1gtea3153 Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su 93.37
d1l7da1183 Nicotinamide nucleotide transhydrogenase dI compon 93.27
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 93.09
d2hmva1134 Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} 92.98
d1n1ea2189 Glycerol-3- phosphate dehydrogenase {Trypanosome ( 92.49
d2f1ka2165 Prephenate dehydrogenase TyrA {Synechocystis sp. p 92.29
d1wjta_103 Transcription elongation factor S-II protein 3 {Mo 92.1
d1txga2180 Glycerol-3- phosphate dehydrogenase {Archaeoglobus 91.89
d1aoga2117 Trypanothione reductase {Trypanosoma cruzi [TaxId: 91.7
d2pv7a2152 Prephenate dehydrogenase TyrA {Haemophilus influen 91.66
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 91.63
d1jaya_212 Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae 91.33
d1m6ia2137 Apoptosis-inducing factor (AIF) {Human (Homo sapie 90.93
d1kyqa1150 Bifunctional dehydrogenase/ferrochelatase Met8p, N 90.77
d1pjqa1113 Siroheme synthase CysG, domain 1 {Salmonella typhi 90.69
d1gesa2116 Glutathione reductase {Escherichia coli [TaxId: 56 90.09
d1ez4a1146 Lactate dehydrogenase {Lactobacillus pentosus [Tax 89.79
d1djqa1340 Trimethylamine dehydrogenase, N-terminal domain {M 89.74
d1dlja2196 UDP-glucose dehydrogenase (UDPGDH) {Streptococcus 88.86
d2gv8a2107 Flavin-dependent monoxygenase SPBP16F5.08c {Schizo 88.74
d1pzga1154 Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 88.62
d3cuma2162 Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru 88.32
d1feca2117 Trypanothione reductase {Crithidia fasciculata [Ta 87.92
d1ps9a2162 2,4-dienoyl-CoA reductase, C-terminal domain {Esch 87.83
d1vpda2161 Hydroxyisobutyrate dehydrogenase {Salmonella typhi 87.77
d1e3ja2170 Ketose reductase (sorbitol dehydrogenase) {Silverl 87.75
d1ldna1148 Lactate dehydrogenase {Bacillus stearothermophilus 87.64
d1trba2126 Thioredoxin reductase {Escherichia coli [TaxId: 56 87.54
d1fl2a2126 Alkyl hydroperoxide reductase subunit F (AhpF), C- 87.38
d1pl8a2171 Ketose reductase (sorbitol dehydrogenase) {Human ( 87.26
d1llua2166 Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax 87.14
d1piwa2168 Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas 86.46
d1nyta1170 Shikimate 5-dehydrogenase AroE {Escherichia coli [ 86.36
d1uxja1142 Malate dehydrogenase {Chloroflexus aurantiacus [Ta 86.33
d1djqa3233 Trimethylamine dehydrogenase, middle domain {Methy 86.03
d1hyha1146 L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La 86.0
d1pgja2178 6-phosphogluconate dehydrogenase {Trypanosoma bruc 85.97
d1i0za1160 Lactate dehydrogenase {Human (Homo sapiens), heart 85.82
d2pgda2176 6-phosphogluconate dehydrogenase {Sheep (Ovis orie 85.81
d1onfa2117 Glutathione reductase {Plasmodium falciparum [TaxI 85.45
d1vdca2130 Thioredoxin reductase {Mouse-ear cress (Arabidopsi 85.42
d1y6ja1142 Lactate dehydrogenase {Clostridium thermocellum [T 84.86
d1vj0a2182 Hypothetical protein TM0436 {Thermotoga maritima [ 84.31
d1uufa2168 Hypothetical protein YahK {Escherichia coli [TaxId 83.81
d3lada2119 Dihydrolipoamide dehydrogenase {Azotobacter vinela 83.55
d1i36a2152 Conserved hypothetical protein MTH1747 {Archaeon M 82.93
d2ldxa1159 Lactate dehydrogenase {Mouse (Mus musculus) [TaxId 82.78
d2g5ca2171 Prephenate dehydrogenase TyrA {Aquifex aeolicus [T 82.51
d1llda1143 Lactate dehydrogenase {Bifidobacterium longum, str 82.21
d1qyca_307 Phenylcoumaran benzylic ether reductase {Loblolly 82.16
d1rjwa2168 Alcohol dehydrogenase {Bacillus stearothermophilus 81.83
d1guza1142 Malate dehydrogenase {Chlorobium vibrioforme [TaxI 81.68
d1q1ra2133 Putidaredoxin reductase {Pseudomonas putida [TaxId 81.19
d1npya1167 Shikimate 5-dehydrogenase-like protein HI0607 {Hae 81.19
d1hyea1145 MJ0490, lactate/malate dehydrogenase {Archaeon Met 81.12
d1q45a_380 12-oxophytodienoate reductase (OPR, OYE homolog) { 80.96
d1t2da1150 Lactate dehydrogenase {Malaria parasite (Plasmodiu 80.37
d1qyda_312 Pinoresinol-lariciresinol reductase {Giant arborvi 80.37
d1hdoa_205 Biliverdin IX beta reductase {Human (Homo sapiens) 80.36
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95  E-value=5.3e-27  Score=267.09  Aligned_cols=263  Identities=24%  Similarity=0.269  Sum_probs=156.0

Q ss_pred             cEEEECCCHHHHHHHHHHHHCCCcEEEEcccccCCCcccccccCCCccccccceeecccccchhhhccCCcHHHHHHHhC
Q 046008          863 RIIVIGAGPAGLTAARHLQRQGFSVTVLEARNRIGGRVYTDRTSLSVPVDLGASIITGVEADVATERRADPSSLVCAQLG  942 (1624)
Q Consensus       863 ~v~IiGaG~aGl~aA~~L~~~g~~v~vlE~~~~~GG~~~s~~~~~g~~~d~Ga~~I~g~~~~v~~~~~~nPl~~LlkeLG  942 (1624)
                      ||||||||++||+||++|+++|++|+|||+++++||+++|.....|+.+|+|++|+...+.         ++..+++++|
T Consensus         1 DViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~---------~~~~l~~~lg   71 (383)
T d2v5za1           1 DVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQN---------RILRLAKELG   71 (383)
T ss_dssp             SEEEECCBHHHHHHHHHHHHTTCCEEEEESSSSSBTTCCEECCTTTSCEESSCCEECTTCH---------HHHHHHHHTT
T ss_pred             CEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCcceeeEEECCCCcEEeCCceEeCCCCh---------HHHHHHHHcC
Confidence            6999999999999999999999999999999999999999886678999999999986543         3456899999


Q ss_pred             CceeeecCCCCeeeccCCcc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhh--hhhccHHHHHHHHHHHHHHhhc
Q 046008          943 LELTVLNSDCPLYDIVSGQK------VPANVDEALEAEFNSLLDDMVLLVAQKGEH--AMKMSLEDGLEYALKRRRMARL 1014 (1624)
Q Consensus       943 Lel~~l~~~~~~yd~~~Gk~------vp~~l~~~l~~~~~slld~l~~~~~~~g~~--a~~~sled~Le~~lk~~r~~~~ 1014 (1624)
                      ++..........+.......      .+.............+...+..........  ........+.            
T Consensus        72 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  139 (383)
T d2v5za1          72 LETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWD------------  139 (383)
T ss_dssp             CCEEECCCSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHH------------
T ss_pred             CcceeccCccceEEecCcccccccccccchhhhhhhhhHHHHHHHHHHhhhhcccccccchhhhhhhh------------
Confidence            98776554433332222211      111111111111111111111000000000  0000000000            


Q ss_pred             cCCcccccccchhhHhhcccCCCCCCCCcccchhccCCHHHHHHHHHHHHhhhhhcccccccccccc---------cccc
Q 046008         1015 GRGREDASMHNSMDVYSKTSSVDSRVPDKDCSREDILSPVERRVMDWHFANLEYGCAALLKEVSLPF---------WNQD 1085 (1624)
Q Consensus      1015 ~~~~~~~~~~~a~d~fs~~~~i~~~~p~~d~l~e~~Lsp~~r~lL~~~~a~ley~~ga~l~~vSl~~---------~~~~ 1085 (1624)
                              .....+                ++......+....++........   +..+...++..         ....
T Consensus       140 --------~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  192 (383)
T d2v5za1         140 --------NMTMKE----------------LLDKLCWTESAKQLATLFVNLCV---TAETHEVSALWFLWYVKQCGGTTR  192 (383)
T ss_dssp             --------TSBHHH----------------HHHHHCSSHHHHHHHHHHHHHHH---SSCTTTSBHHHHHHHHHTTTCHHH
T ss_pred             --------hhHHHH----------------HHHHhccchHHHHHHHHhhhhhh---ccccchhhHHHHHHHHHhhccccc
Confidence                    000000                11111122222222222111110   01111111100         0000


Q ss_pred             cccCCCCCccccccchHHHHHHHHhhhc--cccccceEEEEEecCCCCCCCCCCCcEEEEeCCCcEEEcCEEEEccChhh
Q 046008         1086 DVYGGFGGAHCMIKGGYSTVVEALGKEL--LIHHNHVVTDISYSFKDSDLSDGQSRVKVSTSNGSEFSGDAVLITVPLGC 1163 (1624)
Q Consensus      1086 ~~y~g~~G~~~~VkGGm~sLveALAe~L--~IrLNt~VtrI~~~~~~~~~s~~~~~V~V~TadGeti~AD~VIsAiP~~v 1163 (1624)
                      .......+..+.+.+|++.++++|++..  +|++|++|++|..         ++++|.|++.+|+++.||+||+|+|+.+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~i~~~~~v~~I~~---------~~~~v~v~~~~g~~~~ad~vI~a~p~~~  263 (383)
T d2v5za1         193 IISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ---------TRENVLVETLNHEMYEAKYVISAIPPTL  263 (383)
T ss_dssp             HHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEEESCCEEEEEC---------SSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred             ccccccCcceeeeccchhHHHHHHHHHcCCeEEecCcceEEEe---------cCCeEEEEECCCCEEECCEEEECCCHHH
Confidence            0111123455678999999999998855  8999999999988         5678999999999999999999999998


Q ss_pred             hhhhcccCCCCCcHHHHHHHH
Q 046008         1164 LKAESIMFSPPLPQWKYSAIQ 1184 (1624)
Q Consensus      1164 Lk~~~I~F~P~LP~~k~qAI~ 1184 (1624)
                      +.  .+.|.|+||.++.+++.
T Consensus       264 ~~--~~~~~p~l~~~~~~~~~  282 (383)
T d2v5za1         264 GM--KIHFNPPLPMMRNQMIT  282 (383)
T ss_dssp             GG--GSEEESCCCHHHHHHTT
T ss_pred             Hh--hCccCCCCCHHHHHHHH
Confidence            86  47789999988777653



>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d2dw4a1 a.4.1.18 (A:172-273) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} Back     information, alignment and structure
>d2fq3a1 a.4.1.18 (A:311-395) Transcription regulatory protein swi3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2v5za2 d.16.1.5 (A:290-401) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2dw4a3 d.16.1.5 (A:655-763) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1b5qa2 d.16.1.5 (A:294-405) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d2iida2 d.16.1.5 (A:320-432) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Back     information, alignment and structure
>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} Back     information, alignment and structure
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} Back     information, alignment and structure
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} Back     information, alignment and structure
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} Back     information, alignment and structure
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} Back     information, alignment and structure
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ivda2 d.16.1.5 (A:307-414) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} Back     information, alignment and structure
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1seza2 d.16.1.5 (A:330-441) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} Back     information, alignment and structure
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} Back     information, alignment and structure
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} Back     information, alignment and structure
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} Back     information, alignment and structure
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} Back     information, alignment and structure
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} Back     information, alignment and structure
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} Back     information, alignment and structure
>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]} Back     information, alignment and structure
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Back     information, alignment and structure
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Back     information, alignment and structure
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]} Back     information, alignment and structure
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1wjta_ a.48.3.1 (A:) Transcription elongation factor S-II protein 3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1eo0a_ a.48.3.1 (A:) Transcription elongation factor TFIIS N-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} Back     information, alignment and structure
>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Back     information, alignment and structure
>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1wjta_ a.48.3.1 (A:) Transcription elongation factor S-II protein 3 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Back     information, alignment and structure
>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} Back     information, alignment and structure
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Back     information, alignment and structure
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Back     information, alignment and structure
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Back     information, alignment and structure
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Back     information, alignment and structure
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} Back     information, alignment and structure
>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Back     information, alignment and structure
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Back     information, alignment and structure
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Back     information, alignment and structure
>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} Back     information, alignment and structure
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Back     information, alignment and structure
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure