Citrus Sinensis ID: 046200
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 212 | ||||||
| 255555035 | 671 | ATP binding protein, putative [Ricinus c | 0.933 | 0.295 | 0.402 | 3e-32 | |
| 255555031 | 674 | ATP binding protein, putative [Ricinus c | 0.933 | 0.293 | 0.376 | 7e-32 | |
| 359484134 | 665 | PREDICTED: cysteine-rich receptor-like p | 0.745 | 0.237 | 0.417 | 1e-29 | |
| 297742701 | 792 | unnamed protein product [Vitis vinifera] | 0.745 | 0.199 | 0.417 | 1e-29 | |
| 359477817 | 670 | PREDICTED: cysteine-rich receptor-like p | 0.981 | 0.310 | 0.398 | 2e-29 | |
| 147853396 | 614 | hypothetical protein VITISV_010567 [Viti | 0.740 | 0.255 | 0.426 | 3e-29 | |
| 296089261 | 615 | unnamed protein product [Vitis vinifera] | 0.740 | 0.255 | 0.420 | 5e-29 | |
| 359484020 | 662 | PREDICTED: cysteine-rich receptor-like p | 0.740 | 0.237 | 0.420 | 6e-29 | |
| 359496581 | 666 | PREDICTED: cysteine-rich receptor-like p | 0.910 | 0.289 | 0.367 | 1e-28 | |
| 296088180 | 699 | unnamed protein product [Vitis vinifera] | 0.910 | 0.276 | 0.367 | 1e-28 |
| >gi|255555035|ref|XP_002518555.1| ATP binding protein, putative [Ricinus communis] gi|223542400|gb|EEF43942.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 110/199 (55%), Gaps = 1/199 (0%)
Query: 15 YVYHFCVRESDTSSGGLFMFNVGTLFSAKLYNEAGRYLYSNATEGDYPDKVYGLYNCRFD 74
Y YHFC + + + N+ + S+ N + N G PD VYG + CR D
Sbjct: 28 YRYHFCSNTTTFTPNSTYQTNLNQVLSSLSNNANNSIGFFNIPSGQQPDDVYGSFLCRGD 87
Query: 75 VSNDVCQDCIKVAIHTIVTNCTGAKEAIVWYDQCMVRFCNSSFPSWLETEPSVALLITIN 134
VS DVCQDC+ A IV C K AIVWYDQC++R+ N SF S ++ P V L T +
Sbjct: 88 VSTDVCQDCVTFATQDIVKRCPIEKVAIVWYDQCLLRYENQSFISTMDQTPGVFLSNTQD 147
Query: 135 VTDPYKFSNILAQSFSDLIQNVTS-RDFEYPAAAQMVNASSIDKLRTLVQCIPYLSKSDS 193
++DP +F N+LA + +L + +S E AA N ++ KL +LVQC P LS
Sbjct: 148 ISDPDRFDNLLATTMENLATDASSAASGEKKFAATDDNFTAFQKLYSLVQCTPDLSNPGC 207
Query: 194 NICLRGAVAQIPNCCYGKR 212
CLRGA++ +P+CC GKR
Sbjct: 208 RQCLRGAISNLPSCCGGKR 226
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255555031|ref|XP_002518553.1| ATP binding protein, putative [Ricinus communis] gi|223542398|gb|EEF43940.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|359484134|ref|XP_002269330.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297742701|emb|CBI35335.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359477817|ref|XP_003632027.1| PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147853396|emb|CAN80208.1| hypothetical protein VITISV_010567 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296089261|emb|CBI39033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359484020|ref|XP_002273323.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359496581|ref|XP_002270035.2| PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296088180|emb|CBI35672.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 212 | ||||||
| TAIR|locus:2031341 | 324 | AT1G63550 [Arabidopsis thalian | 0.910 | 0.595 | 0.361 | 6.4e-28 | |
| TAIR|locus:2115728 | 675 | CRK25 "cysteine-rich RLK (RECE | 0.910 | 0.285 | 0.323 | 1.6e-25 | |
| TAIR|locus:2121676 | 669 | CRK10 "cysteine-rich RLK (RECE | 0.971 | 0.307 | 0.319 | 2.4e-24 | |
| TAIR|locus:2031311 | 284 | AT1G63570 "AT1G63570" [Arabido | 0.900 | 0.672 | 0.338 | 1.1e-23 | |
| TAIR|locus:2095662 | 252 | AT3G22060 "AT3G22060" [Arabido | 0.919 | 0.773 | 0.318 | 1.4e-23 | |
| TAIR|locus:2121626 | 830 | CRK23 "cysteine-rich RLK (RECE | 0.905 | 0.231 | 0.316 | 9.3e-23 | |
| TAIR|locus:2195778 | 341 | AT1G61750 "AT1G61750" [Arabido | 0.933 | 0.580 | 0.291 | 6.3e-21 | |
| TAIR|locus:2031381 | 268 | AT1G63590 "AT1G63590" [Arabido | 0.882 | 0.697 | 0.326 | 1.2e-19 | |
| TAIR|locus:2155125 | 286 | AT5G41280 "AT5G41280" [Arabido | 0.952 | 0.706 | 0.303 | 1.2e-19 | |
| TAIR|locus:2155130 | 287 | AT5G41290 [Arabidopsis thalian | 0.891 | 0.658 | 0.304 | 1.2e-19 |
| TAIR|locus:2031341 AT1G63550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 72/199 (36%), Positives = 109/199 (54%)
Query: 14 NYVYHFCVRESDTSSGGLFMFNVGTLFSAKLYNEAGRYLYSNATEGDYPDKVYGLYNCRF 73
++++ C ++ + + N TL A L + YSNATEG PD V+G++ CR
Sbjct: 30 DHIFTVCNPTNNFTQTSSYETNRDTLL-ASLRESSSLGHYSNATEGLSPDTVHGMFLCRG 88
Query: 74 DVSNDVCQDCIKVAIHTIVTNCTGAKEAIVWYDQCMVRFCNSSFPSWLETEPSVALLITI 133
D++ C DC++ A I +NCT K A+++YD+CMVR+ N SF S LE PS+ +
Sbjct: 89 DITTASCVDCVQTATTEIASNCTLNKRAVIYYDECMVRYSNVSFSSELEIVPSITIYSLR 148
Query: 134 NVTDPYKFSNILAQSFSDLIQNVTSRDFE--YPAAAQMVNAS--SIDKLRTLVQCIPYLS 189
+ +P +F+ L + FS+LI NV+S + + V S S D L T+VQC P L
Sbjct: 149 SAPNPTRFNQTLTEKFSELIFNVSSSSLVPYFVEDQERVTQSEGSYD-LDTMVQCSPDLD 207
Query: 190 KSDSNICLRGAVAQIPNCC 208
+ +CLR A +I CC
Sbjct: 208 IFNCTVCLRVAFFRISTCC 226
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| TAIR|locus:2115728 CRK25 "cysteine-rich RLK (RECEPTOR-like protein kinase) 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031311 AT1G63570 "AT1G63570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2095662 AT3G22060 "AT3G22060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2121626 CRK23 "cysteine-rich RLK (RECEPTOR-like protein kinase) 23" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2195778 AT1G61750 "AT1G61750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031381 AT1G63590 "AT1G63590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2155125 AT5G41280 "AT5G41280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2155130 AT5G41290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 212 | |||
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 2e-19 | |
| pfam01657 | 106 | pfam01657, Stress-antifung, Salt stress response/a | 2e-04 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Score = 79.4 bits (196), Expect = 2e-19
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 17 YHFCVRESD---TSSGGLFMFNVGTLFSAKLYNEA---GRYLYSNATEGDYPDKVYGLYN 70
+H C + T++ F N+ L S+ L + A ++ T G PD VYGL
Sbjct: 1 FHLCSSNTSGNYTTANSTFESNLNALLSS-LSSNAASSSGKGFAAGTSGAAPDTVYGLAQ 59
Query: 71 CRFDVSNDVCQDCIKVAIHTIVTNCTGAKEAIVWYDQCMVRFCNSSF 117
CR D+S C+ C+ A+ + C K +WYD C +R+ + F
Sbjct: 60 CRGDLSASDCRSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYPF 106
|
This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106 |
| >gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 212 | |||
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.94 | |
| PF01657 | 106 | Stress-antifung: Salt stress response/antifungal; | 99.63 |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
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Probab=99.94 E-value=1.9e-27 Score=175.21 Aligned_cols=101 Identities=34% Similarity=0.731 Sum_probs=77.6
Q ss_pred ccCCC-C-CCcc-CCCchHHHHHHHHHHHHHhhccCC--CCeeeeecCCCCCeeeEEccccCCCChhhHHHHHHHHHHHH
Q 046200 17 YHFCV-R-ESDT-SSGGLFMFNVGTLFSAKLYNEAGR--YLYSNATEGDYPDKVYGLYNCRFDVSNDVCQDCIKVAIHTI 91 (212)
Q Consensus 17 ~~~C~-~-~~~~-~~~s~f~~nl~~ll~~L~~~a~~~--~~f~~~~~g~~~~~vYgl~qC~~Dls~~~C~~Cl~~a~~~~ 91 (212)
|+.|+ + ..++ +++++|+++|+.||..|+..++.. .+|+++..|.++++||||+||++||++.+|..||+.++..+
T Consensus 1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~ 80 (106)
T PF01657_consen 1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI 80 (106)
T ss_dssp ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence 67899 4 4556 567789999999999999998654 57999988888899999999999999999999999999999
Q ss_pred hhhCCCCceeEEEccceeEEEcCcCC
Q 046200 92 VTNCTGAKEAIVWYDQCMVRFCNSSF 117 (212)
Q Consensus 92 ~~~C~~~~~a~i~~~~C~lRYs~~~f 117 (212)
+..|+.++||+||+++|+||||+++|
T Consensus 81 ~~~C~~~~g~~v~~~~C~lRY~~~~F 106 (106)
T PF01657_consen 81 SSCCPGSRGGRVWYDSCFLRYENYPF 106 (106)
T ss_dssp HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred HHhCCCCceEEEECCCEEEEEECCCC
Confidence 99999999999999999999999998
|
The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D. |
| >PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 212 | |||
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 1e-20 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 5e-09 |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 212 | |||
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.97 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.96 | |
| 2e79_A | 108 | Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect | 99.73 | |
| 3a2e_A | 108 | Ginkbilobin-2; domain 26 unknown function (DUF26), | 99.73 |
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-30 Score=189.93 Aligned_cols=106 Identities=24% Similarity=0.445 Sum_probs=96.0
Q ss_pred cCccccccCCCCCCccCCCchHHHHHHHHHHHHHhhccCC-CCeeeeecCC-CCCeeeEEccccCCCChhhHHHHHHHHH
Q 046200 11 LDSNYVYHFCVRESDTSSGGLFMFNVGTLFSAKLYNEAGR-YLYSNATEGD-YPDKVYGLYNCRFDVSNDVCQDCIKVAI 88 (212)
Q Consensus 11 ~~~~~~~~~C~~~~~~~~~s~f~~nl~~ll~~L~~~a~~~-~~f~~~~~g~-~~~~vYgl~qC~~Dls~~~C~~Cl~~a~ 88 (212)
+++.++++.|++ ++|+++++|++||+.||..|+++++.+ .+|+++..|. ++++||||+|||+|+++.+|+.||+.++
T Consensus 1 A~t~~v~~~Cn~-~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~ 79 (108)
T 3a2e_A 1 ANTAFVSSACNT-QKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLV 79 (108)
T ss_dssp CCCCEEEEEECS-SBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCcceeeeecCC-CccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHH
Confidence 467899999975 799999999999999999999998654 3577776654 4689999999999999999999999999
Q ss_pred HHHhhhCCCCceeEEEccceeEEEcCcCC
Q 046200 89 HTIVTNCTGAKEAIVWYDQCMVRFCNSSF 117 (212)
Q Consensus 89 ~~~~~~C~~~~~a~i~~~~C~lRYs~~~f 117 (212)
.++++.||+++||+||+++|+||||+++|
T Consensus 80 ~~~~~~C~~~~g~~i~~~~C~lRY~~~~F 108 (108)
T 3a2e_A 80 NRIFSICNNAIGARVQLVDCFIQYEQRSF 108 (108)
T ss_dssp TTHHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred HHHHHHCCCCceEEEECCCEEEEEeCCcC
Confidence 99999999999999999999999999998
|
| >3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00