Citrus Sinensis ID: 046254

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-
MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF
cEEcccEEEEEEEEcccccEEEEEEEccccccEEEccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEEEEcccccccccccccEEEEcccccccccccccccccEEEEcccccccHHHHHcccccccEEEccccccccccEEEEEEEEEEccEEEccccccEEEEEcccccEEEccccccEEccHHHHHHHHHHHHHHHcccccccccccccccccEEEcccccccccEEEEEEEccEEEEccccEEEEEccccEEEEEEEccccccccEEEEcEEEEEEEEEEEcccc
ccccccEEEEEEEEccccccEEEEEEccccEEEEEccccHHHcccccccccccccccccccccccHHHccccccccccEEEEEEEccccccccEEEEEEEEEcccccccccEcccEEEEccccccccccccccccccEEEcccccccHHHHHHccccccEEEEEccccccccEEEEEEEEEEccEEEcccHHHEEEccccccEEEEEcccEEEcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccEccEEEEEEcccEEEcccccEEEEEccccEEEEEEEEccccccEEEEEEEEEccEEEEEEcccc
MFTLNHTYMLKLGIGDPVKSLWFLLDTVagltwtqcqpckscyeqndpiynsrsfksykklpcydasckspfhcfegdcfygitygdvyetkevdsldtstllppdepspvsvqnirfgcsleskDFVSIQKKIIAGIMGLNWDSTSFMVQlgrlvpdrfscclvqpdksfhsrlefgdqiiagkslnlppnsftiklngqrgcindcgsVLTVIECEVYAVLTAEFIDYFSQHDIEKLFtcrkcgvtcfnlparfnsfpsmtyhfqgadlvvepenvfifnhqdsfffffgpaftprkgktilgarhqhntqfvydldtf
MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIiagkslnlpPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTIlgarhqhntqfvydldtf
MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSfffffGPAFTPRKGKTILGARHQHNTQFVYDLDTF
**TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVD*****************VQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYD****
MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCK***HCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFS********TCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF
MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF
***LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDT*
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooo
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MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGKSLNLPPNSFTIKLNGQRGCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query321 2.2.26 [Sep-21-2011]
Q766C2438 Aspartic proteinase nepen N/A no 0.947 0.694 0.261 9e-27
Q766C3437 Aspartic proteinase nepen N/A no 0.909 0.668 0.295 1e-24
Q9LS40500 Protein ASPARTIC PROTEASE yes no 0.919 0.59 0.250 2e-24
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.909 0.621 0.240 3e-20
Q6XBF8437 Aspartic proteinase CDR1 no no 0.912 0.670 0.277 1e-19
Q3EBM5447 Probable aspartic proteas no no 0.909 0.653 0.251 4e-15
Q9S9K4475 Aspartic proteinase-like no no 0.928 0.627 0.227 2e-07
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.563 0.441 0.267 2e-05
Q9LZL3453 Aspartic proteinase PCS1 no no 0.884 0.626 0.196 0.0009
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function desciption
 Score =  121 bits (303), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 151/355 (42%), Gaps = 51/355 (14%)

Query: 1   MFTLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKK 60
           ++  +  Y++ + IG P  S   ++DT + L WTQC+PC  C+ Q  PI+N +   S+  
Sbjct: 89  VYAGDGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFST 148

Query: 61  LPCYDASCKS-PFH-CFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRF 118
           LPC    C+  P   C   +C Y   YGD   T+   + +T T     E S  SV NI F
Sbjct: 149 LPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTF----ETS--SVPNIAF 202

Query: 119 GCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFG 178
           GC  +++ F    +   AG++G+ W   S   QLG     +FS C+     S  S L  G
Sbjct: 203 GCGEDNQGF---GQGNGAGLIGMGWGPLSLPSQLGV---GQFSYCMTSYGSSSPSTLALG 256

Query: 179 DQ------------------------------IIAGKSLNLPPNSFTIKLNGQRGCINDC 208
                                            + G +L +P ++F ++ +G  G I D 
Sbjct: 257 SAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDS 316

Query: 209 GSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNS--FPSMTYHF 266
           G+ LT +  + Y  +   F D  +   +++  +      TCF  P+  ++   P ++  F
Sbjct: 317 GTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLS---TCFQQPSDGSTVQVPEISMQF 373

Query: 267 QGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF 321
            G  L +  +N+ I   +       G +   + G +I G   Q  TQ +YDL   
Sbjct: 374 DGGVLNLGEQNILISPAEGVICLAMGSS--SQLGISIFGNIQQQETQVLYDLQNL 426
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
255563741 448 Aspartic proteinase nepenthesin-2 precur 0.928 0.665 0.315 2e-36
224114179 449 predicted protein [Populus trichocarpa] 0.922 0.659 0.272 2e-29
449523529 461 PREDICTED: aspartic proteinase nepenthes 0.937 0.652 0.284 7e-28
449453902 716 PREDICTED: LOW QUALITY PROTEIN: aspartic 0.937 0.420 0.284 1e-27
409179880 437 aspartic proteinase nepenthesin 2 [Nepen 0.925 0.679 0.279 1e-27
225438315 436 PREDICTED: aspartic proteinase nepenthes 0.922 0.678 0.298 6e-27
326494754 449 predicted protein [Hordeum vulgare subsp 0.912 0.652 0.263 1e-25
116790042 460 unknown [Picea sitchensis] 0.931 0.65 0.281 1e-25
302768196398 hypothetical protein SELMODRAFT_87804 [S 0.940 0.758 0.286 1e-25
147862576 436 hypothetical protein VITISV_006338 [Viti 0.925 0.681 0.285 3e-25
>gi|255563741|ref|XP_002522872.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223537956|gb|EEF39570.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 169/352 (48%), Gaps = 54/352 (15%)

Query: 8   YMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDAS 67
           Y++K+ IG P   L+ + DT +GL WTQC+PC   + Q  PI+NS + ++Y+ LPC    
Sbjct: 91  YLVKVIIGSPGVPLYLVPDTGSGLFWTQCEPCTRRFRQLPPIFNSTASRTYRDLPCQHQF 150

Query: 68  C---KSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIR----FGC 120
           C   ++ F C +  C Y I Y     T  V + D             S +N R    FGC
Sbjct: 151 CTNNQNVFQCRDDKCVYRIAYAGGSATAGVAAQDILQ----------SAENDRIPFYFGC 200

Query: 121 SLESKDFVSIQ-KKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSR----L 175
           S ++++F + +      GI+GLN    S + Q+  +  +RFS CL   D S  S     L
Sbjct: 201 SRDNQNFSTFESSGKGGGIIGLNMSPVSLLQQMNHITKNRFSYCLNLFDLSSPSHATSLL 260

Query: 176 EFGDQI-----------------------------IAGKSLNLPPNSFTIKLNGQRGCIN 206
            FG+ I                             +AG  + +PP +F +K +G  G I 
Sbjct: 261 RFGNDIRKSRRKYLSTPFVSPRGMPNYFLNLIDVSVAGNRMQIPPGTFALKPDGTGGTII 320

Query: 207 DCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPAR-FNSFPSMTYH 265
           D G+ +T I    Y  +   F +YF QH  +++   +  G  C+      F+++PSM +H
Sbjct: 321 DSGTAVTYISQTAYFPVITAFKNYFDQHGFQRV-NIQLSGYICYKQQGHTFHNYPSMAFH 379

Query: 266 FQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYD 317
           FQGAD  VEPE V++       F       +P++ +TI+GA +Q NTQF+YD
Sbjct: 380 FQGADFFVEPEYVYLTVQDRGAFCVALQPISPQQ-RTIIGALNQANTQFIYD 430

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224114179|ref|XP_002332420.1| predicted protein [Populus trichocarpa] gi|222832373|gb|EEE70850.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449523529|ref|XP_004168776.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449453902|ref|XP_004144695.1| PREDICTED: LOW QUALITY PROTEIN: aspartic proteinase nepenthesin-1-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|409179880|gb|AFV26025.1| aspartic proteinase nepenthesin 2 [Nepenthes mirabilis] Back     alignment and taxonomy information
>gi|225438315|ref|XP_002272802.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|326494754|dbj|BAJ94496.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514480|dbj|BAJ96227.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|116790042|gb|ABK25480.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|302768196|ref|XP_002967518.1| hypothetical protein SELMODRAFT_87804 [Selaginella moellendorffii] gi|300165509|gb|EFJ32117.1| hypothetical protein SELMODRAFT_87804 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|147862576|emb|CAN79341.1| hypothetical protein VITISV_006338 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query321
TAIR|locus:2095042500 ASPG1 "ASPARTIC PROTEASE IN GU 0.532 0.342 0.302 3.4e-29
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.538 0.401 0.331 2e-27
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.560 0.411 0.328 3.6e-27
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.909 0.604 0.285 3.5e-26
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.517 0.360 0.320 1.4e-25
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.510 0.348 0.297 1.4e-25
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.545 0.369 0.319 3.5e-22
TAIR|locus:2077700535 AT3G59080 "AT3G59080" [Arabido 0.595 0.357 0.309 5.1e-22
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.514 0.340 0.318 7.4e-22
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.591 0.360 0.311 1.3e-20
TAIR|locus:2095042 ASPG1 "ASPARTIC PROTEASE IN GUARD CELL 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 238 (88.8 bits), Expect = 3.4e-29, Sum P(2) = 3.4e-29
 Identities = 56/185 (30%), Positives = 85/185 (45%)

Query:     8 YMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDAS 67
             Y  ++G+G P K ++ +LDT + + W QC+PC  CY+Q+DP++N  S  +YK L C    
Sbjct:   162 YFSRIGVGTPAKEMYLVLDTGSDVNWIQCEPCADCYQQSDPVFNPTSSSTYKSLTCSAPQ 221

Query:    68 CK--SPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESK 125
             C       C    C Y ++YGD   T  V  L T T+   +      + N+  GC  +++
Sbjct:   222 CSLLETSACRSNKCLYQVSYGDGSFT--VGELATDTVTFGNSGK---INNVALGCGHDNE 276

Query:   126 DFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGK 185
                +      AG++GL     S   Q+       FS CLV  D    S L+F    + G 
Sbjct:   277 GLFTGA----AGLLGLGGGVLSITNQMKAT---SFSYCLVDRDSGKSSSLDFNSVQLGGG 329

Query:   186 SLNLP 190
                 P
Sbjct:   330 DATAP 334
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0009414 "response to water deprivation" evidence=IMP
GO:0009737 "response to abscisic acid stimulus" evidence=IMP
GO:0070001 "aspartic-type peptidase activity" evidence=IDA
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077700 AT3G59080 "AT3G59080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 5e-30
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-23
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 6e-21
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 2e-15
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 8e-06
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information 
 Score =  117 bits (296), Expect = 5e-30
 Identities = 94/355 (26%), Positives = 147/355 (41%), Gaps = 63/355 (17%)

Query: 8   YMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDAS 67
           Y++ + IG P   +  + DT + L WTQC+PC  CY+Q  P+++ +   +YK + C  + 
Sbjct: 85  YLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQ 144

Query: 68  C----KSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGC--- 120
           C           E  C Y  +YGD   TK   +++T T +      PVS   I FGC   
Sbjct: 145 CQALGNQASCSDENTCTYSYSYGDGSFTKGNLAVETLT-IGSTSGRPVSFPGIVFGCGHN 203

Query: 121 ---SLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLV--QPDKSFHSRL 175
              + + K          +GI+GL     S + QLG  +  +FS CLV    D +  S++
Sbjct: 204 NGGTFDEKG---------SGIVGLGGGPLSLISQLGSSIGGKFSYCLVPLSSDSNGTSKI 254

Query: 176 EFG-DQIIAGK--------------------------SLNLPPNSFTIKLNGQRGCINDC 208
            FG + I++G                           S  LP    +     +   I D 
Sbjct: 255 NFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDS 314

Query: 209 GSVLTVIECEVYAVL---TAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYH 265
           G+ LT++  + Y+ L     E I      D + L +       C++  +     P +T H
Sbjct: 315 GTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLS------LCYSSTSDIK-LPIITAH 367

Query: 266 FQGADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDT 320
           F GAD+ ++P N F+   +D   F    A  P     I G   Q N    YDL++
Sbjct: 368 FTGADVKLQPLNTFVKVSEDLVCF----AMIPTSSIAIFGNLAQMNFLVGYDLES 418

Length = 431
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 321
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 100.0
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.93
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.88
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.18
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.79
PF1365090 Asp_protease_2: Aspartyl protease 96.1
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.22
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 92.18
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.12
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 88.4
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 86.07
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 85.89
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 84.14
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.8e-59  Score=440.23  Aligned_cols=307  Identities=28%  Similarity=0.517  Sum_probs=249.9

Q ss_pred             ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCC-CC--CCCCC-C
Q 046254            3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKS-PF--HCFEG-D   78 (321)
Q Consensus         3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~-~~--~c~~~-~   78 (321)
                      .++++|+++|.||||||++.|++||||+++||+|++|..|..+.++.|||++|+||+.++|.++.|+. +.  .|..+ .
T Consensus        80 ~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~~~~  159 (431)
T PLN03146         80 SNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSDENT  159 (431)
T ss_pred             cCCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCCCCC
Confidence            45789999999999999999999999999999999999999888999999999999999999999987 32  47554 6


Q ss_pred             ceEEEEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCCchHHHhhhccCC
Q 046254           79 CFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGRLVPD  158 (321)
Q Consensus        79 ~~~~~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~~~~  158 (321)
                      |.|.+.|++|+.+.|.+++|+|+|+ +..++...++++.|||++.+.+  .|. ...+||||||++++|++.|+...+.+
T Consensus       160 c~y~i~Ygdgs~~~G~l~~Dtltlg-~~~~~~~~v~~~~FGc~~~~~g--~f~-~~~~GilGLG~~~~Sl~sql~~~~~~  235 (431)
T PLN03146        160 CTYSYSYGDGSFTKGNLAVETLTIG-STSGRPVSFPGIVFGCGHNNGG--TFD-EKGSGIVGLGGGPLSLISQLGSSIGG  235 (431)
T ss_pred             CeeEEEeCCCCceeeEEEEEEEEec-cCCCCcceeCCEEEeCCCCCCC--Ccc-CCCceeEecCCCCccHHHHhhHhhCC
Confidence            9999999999988999999999999 6554446788999999998876  552 25799999999999999999876667


Q ss_pred             ceEEeecCCCC--CCcceEEeCCCCCC-c---ceEecC----CCceeeee-------------------cCCcceEEecc
Q 046254          159 RFSCCLVQPDK--SFHSRLEFGDQIIA-G---KSLNLP----PNSFTIKL-------------------NGQRGCINDCG  209 (321)
Q Consensus       159 ~Fs~~l~~~~~--~~~g~l~~G~~d~~-~---t~l~i~----~~~~~i~~-------------------~~~~~~iiDSG  209 (321)
                      +|||||.+...  ...|.|+||+.... +   .+.++-    ...|.+..                   .+.+++|||||
T Consensus       236 ~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~~iiDSG  315 (431)
T PLN03146        236 KFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGNIIIDSG  315 (431)
T ss_pred             cEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCcEEEeCC
Confidence            99999975321  35799999996421 1   112221    23343321                   11247999999


Q ss_pred             CceEeechHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEE
Q 046254          210 SVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFF  289 (321)
Q Consensus       210 Tt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~  289 (321)
                      |++++||+++|++|+++|.+.+...+......   .+..||.... ...+|+|+|+|+|.++.+++++|++....+.+|+
T Consensus       316 Tt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~---~~~~C~~~~~-~~~~P~i~~~F~Ga~~~l~~~~~~~~~~~~~~Cl  391 (431)
T PLN03146        316 TTLTLLPSDFYSELESAVEEAIGGERVSDPQG---LLSLCYSSTS-DIKLPIITAHFTGADVKLQPLNTFVKVSEDLVCF  391 (431)
T ss_pred             ccceecCHHHHHHHHHHHHHHhccccCCCCCC---CCCccccCCC-CCCCCeEEEEECCCeeecCcceeEEEcCCCcEEE
Confidence            99999999999999999998875333222222   4678998542 2468999999998899999999999887778999


Q ss_pred             EEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254          290 FFGPAFTPRKGKTILGARHQHNTQFVYDLDTF  321 (321)
Q Consensus       290 ~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~  321 (321)
                      +++..    .+.+|||+.|||++|||||++|+
T Consensus       392 ~~~~~----~~~~IlG~~~q~~~~vvyDl~~~  419 (431)
T PLN03146        392 AMIPT----SSIAIFGNLAQMNFLVGYDLESK  419 (431)
T ss_pred             EEecC----CCceEECeeeEeeEEEEEECCCC
Confidence            98765    34699999999999999999974

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query321
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-42
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 1e-36
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 3e-33
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  150 bits (379), Expect = 2e-42
 Identities = 58/360 (16%), Positives = 97/360 (26%), Gaps = 54/360 (15%)

Query: 8   YMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDAS 67
           +   L    P+  +  L+D      W  C+   S      P  +S          C    
Sbjct: 23  HWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQCSRANTHQCLSCP 82

Query: 68  CKSPFHCFEGDC-FYGITYGDV-----YETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCS 121
             S   C +  C                  ++V ++  +          V+V    F C+
Sbjct: 83  AASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCA 142

Query: 122 LESKDFVSIQKKIIAGIMGLNWDSTSFMVQLGR--LVPDRFSCCLVQPDKSFHSRLEFGD 179
             S        +   G+ GL     S   QL     +  +F+ CL     +    + FGD
Sbjct: 143 -PSFLVQKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLS-RYPTSKGAIIFGD 200

Query: 180 Q------------------------------------IIAGKSLN-LPPNSFTIKLNGQR 202
                                                 I   S+  L   S TI  +   
Sbjct: 201 APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSG 260

Query: 203 GCINDCGSVLTVIECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSM 262
           G +    +   V++  VY   T     +  Q   +           CFN     N++PS+
Sbjct: 261 GTMISTSTPHMVLQQSVYQAFTQV---FAQQLPKQAQVKSVAPFGLCFNSNK-INAYPSV 316

Query: 263 TYHFQ---GADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLD 319
                   G    +  E++ +                  + +  LGAR       V+DL 
Sbjct: 317 DLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLA 376
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.96
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.9
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.34
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 84.63
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 82.46
3liy_A116 Protease; hydrolase, hydrolase-hydrolase inhibitor 81.69
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=1.4e-55  Score=415.14  Aligned_cols=298  Identities=18%  Similarity=0.234  Sum_probs=237.8

Q ss_pred             cCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCC-C-C---------
Q 046254            4 LNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKS-P-F---------   72 (321)
Q Consensus         4 ~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~-~-~---------   72 (321)
                      .+++|+++|.||||||++.|++||||+++||+|++|             .+|+||+.++|.++.|.. . +         
T Consensus        18 ~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c-------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~   84 (413)
T 3vla_A           18 STLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN-------------YVSSTYRPVRCRTSQCSLSGSIACGDCFNGP   84 (413)
T ss_dssp             TTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS-------------CCCTTCEECBTTSHHHHHTTCCEEECCSSCC
T ss_pred             CCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC-------------CCCCCcCccCCCcccccccccCCCcccccCC
Confidence            478999999999999999999999999999998865             379999999999988876 2 2         


Q ss_pred             --CCCCCCceEEEEEC-CCCceEEEEEEEEEEecCCCCCC----CccccceeEeeccccCCcccccccCcceEEeeCCCC
Q 046254           73 --HCFEGDCFYGITYG-DVYETKEVDSLDTSTLLPPDEPS----PVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDS  145 (321)
Q Consensus        73 --~c~~~~~~~~~~Y~-~g~~~~G~l~~D~v~~~~~~~~~----~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~  145 (321)
                        .|.++.|.|.+.|+ +|+.+.|.|++|+|+|+ +.++.    .+.++++.|||++.+.....+  ...+||||||+++
T Consensus        85 ~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~-~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~--~~~dGIlGLg~~~  161 (413)
T 3vla_A           85 RPGCNNNTCGVFPENPVINTATGGEVAEDVVSVE-STDGSSSGRVVTVPRFIFSCAPTSLLQNLA--SGVVGMAGLGRTR  161 (413)
T ss_dssp             BTTBCSSEEEECCEETTTTEECCEEEEEEEEEEE-EECSSBEEEEEEEEEEEEEEECGGGGTTSC--TTCCEEEECSSSS
T ss_pred             CCCCCCCcCcceeecCcCCceeeeEEEEEEEEec-ccCCCCcccceeeCCEEEECcccccccCcc--cccccccccCCCC
Confidence              25556799999994 77779999999999998 55443    267889999999986320023  5689999999999


Q ss_pred             CchHHHhhhc--cCCceEEeecCCCCCCcceEEeCCCCCC-----------cceEecCC---------------Cceeee
Q 046254          146 TSFMVQLGRL--VPDRFSCCLVQPDKSFHSRLEFGDQIIA-----------GKSLNLPP---------------NSFTIK  197 (321)
Q Consensus       146 ~s~~~ql~~~--~~~~Fs~~l~~~~~~~~g~l~~G~~d~~-----------~t~l~i~~---------------~~~~i~  197 (321)
                      +|++.||..+  ++++||+||.+.. ..+|.|+||+.+..           -+++++-.               ..|.++
T Consensus       162 lSl~sql~~~~~i~~~FS~cL~~~~-~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~  240 (413)
T 3vla_A          162 IALPSQFASAFSFKRKFAMCLSGST-SSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG  240 (413)
T ss_dssp             SSHHHHHHHHHTCCSEEEEECCSCS-SSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred             cchHHHHhhhcCCCceEEEeCCCCC-CCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence            9999999874  4689999999853 46899999999841           13444321               456653


Q ss_pred             e------------c---------CCcceEEeccCceEeechHHHHHHHHHHHHHhc--cCCcccccccCCCccceEecCC
Q 046254          198 L------------N---------GQRGCINDCGSVLTVIECEVYAVLTAEFIDYFS--QHDIEKLFTCRKCGVTCFNLPA  254 (321)
Q Consensus       198 ~------------~---------~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~C~~~~~  254 (321)
                      .            .         +..++||||||++++||+++|++|+++|.+.+.  +++......   .+..||..+.
T Consensus       241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~---~~~~C~~~~~  317 (413)
T 3vla_A          241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVA---PFGACFSTDN  317 (413)
T ss_dssp             CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCT---TCSCEEECTT
T ss_pred             EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCC---CCcceeccCC
Confidence            1            1         346799999999999999999999999998864  333333222   5789999864


Q ss_pred             CC-----CCCCeEEEEEeC--cEEEeCCCceEEEcCCCeEEEEEecCCCCCCCceeeechheeeeEEEEeCCCC
Q 046254          255 RF-----NSFPSMTYHFQG--ADLVVEPENVFIFNHQDSFFFFFGPAFTPRKGKTILGARHQHNTQFVYDLDTF  321 (321)
Q Consensus       255 ~~-----~~~P~i~~~f~g--~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~fl~~~~vvfD~~~~  321 (321)
                      ..     ..+|+|+|+|+|  .+|+|++++|+++..++..|++++.......+.||||++|||++|+|||++|+
T Consensus       318 ~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~  391 (413)
T 3vla_A          318 ILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATS  391 (413)
T ss_dssp             CCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTT
T ss_pred             ccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCC
Confidence            31     378999999998  49999999999987667899998875212236899999999999999999984
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 321
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 9e-21
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-17
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 3e-16
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 6e-16
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 7e-16
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 1e-15
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-14
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 2e-14
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 2e-13
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 3e-13
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 6e-13
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 3e-12
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 7e-12
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 8e-11
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 1e-10
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-10
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 7e-10
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 9e-10
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 4e-09
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 9e-09
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-08
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 4e-05
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 89.3 bits (220), Expect = 9e-21
 Identities = 47/354 (13%), Positives = 88/354 (24%), Gaps = 48/354 (13%)

Query: 8   YMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDAS 67
           Y +    G  +     +LD    L W+ C   +   E            +Y    C   S
Sbjct: 16  YTIPFHDGASL-----VLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLANAYPAPGCPAPS 70

Query: 68  CKSPFHCFEGDCFYGITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDF 127
           C S  H       Y              S         D   PVS  N+    +      
Sbjct: 71  CGSDKHDKPC-TAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKL 129

Query: 128 VSIQKKIIAGIMGLNWDSTSFMVQLGRLVPDRFSCCLVQPDKSFHSRLEFGDQIIAGK-- 185
           ++   +   G+ GL     +   Q+           L  P       +  G  +   +  
Sbjct: 130 LASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFT 189

Query: 186 --------------------SLNLPPNSFTIKLN----GQRGCINDCGSVLTVIECEVYA 221
                               + ++      + +        G +        ++  +VY 
Sbjct: 190 QSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYR 249

Query: 222 VLTAEFIDYFSQHDIEKLFTCRKC-----GVTCFNLPARFNS-----FPSMTYHFQ-GAD 270
            L   F    +          R          C++     N+      P++      G+D
Sbjct: 250 PLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSD 309

Query: 271 LVVEPENVFIFNHQDSFFFFFGPAF-----TPRKGKTILGARHQHNTQFVYDLD 319
             +  +N  +   Q +    F           R    ILG     +    +D++
Sbjct: 310 WTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDME 363
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query321
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=5.6e-50  Score=364.30  Aligned_cols=278  Identities=18%  Similarity=0.254  Sum_probs=222.5

Q ss_pred             ccCceEEEEEEecCCCcEEEEEEEcCCCceeEeCCCCCCCCCCCCCCccCCCCCccceeeCCCCCCCCCCCCCCCCceEE
Q 046254            3 TLNHTYMLKLGIGDPVKSLWFLLDTVAGLTWTQCQPCKSCYEQNDPIYNSRSFKSYKKLPCYDASCKSPFHCFEGDCFYG   82 (321)
Q Consensus         3 ~~~~~y~~~v~iGtP~q~~~~~~DTGS~~~wv~~~~C~~C~~~~~~~f~~~~SsT~~~~~c~~~~C~~~~~c~~~~~~~~   82 (321)
                      ..+..|+++|.||||||++.|++||||+++||+|+.|..|..+ ++.|+|++|+||+...                |.|.
T Consensus        12 ~~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~~C~~c~~~-~~~y~~~~SsT~~~~~----------------~~~~   74 (325)
T d2apra_          12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSG-QTKYDPNQSSTYQADG----------------RTWS   74 (325)
T ss_dssp             TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTT-SCCBCGGGCTTCEEEE----------------EEEE
T ss_pred             CCCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCCCCCccccC-CCccCcccCCceeECC----------------eEEE
Confidence            3567899999999999999999999999999999999998755 4689999999999865                7899


Q ss_pred             EEECCCCceEEEEEEEEEEecCCCCCCCccccceeEeeccccCCcccccccCcceEEeeCCCCC-------chHHHhhhc
Q 046254           83 ITYGDVYETKEVDSLDTSTLLPPDEPSPVSVQNIRFGCSLESKDFVSIQKKIIAGIMGLNWDST-------SFMVQLGRL  155 (321)
Q Consensus        83 ~~Y~~g~~~~G~l~~D~v~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~  155 (321)
                      +.|++|..+.|.+++|+++++ +     ..+.++.|+++.....  .......+||+|||+...       +++.++..+
T Consensus        75 ~~y~~g~~~~G~~~~D~~~~~-~-----~~~~~~~~~~~~~~~~--~~~~~~~~GilGlg~~~~~~~~~~~~~~~~l~~~  146 (325)
T d2apra_          75 ISYGDGSSASGILAKDNVNLG-G-----LLIKGQTIELAKREAA--SFASGPNDGLLGLGFDTITTVRGVKTPMDNLISQ  146 (325)
T ss_dssp             EECTTSCEEEEEEEEEEEEET-T-----EEEEEEEEEEEEEECH--HHHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHT
T ss_pred             EEeCCCCeEEEEEEeeeEEee-e-----eeccCcceeeeeeecc--cccccccCcccccccccccccccCCcchhHHHhh
Confidence            999999889999999999999 7     7899999999987755  333456899999997543       456666543


Q ss_pred             ---cCCceEEeecCCCCCCcceEEeCCCCCCc-----ceEecC--CCceeeee----------cCCcceEEeccCceEee
Q 046254          156 ---VPDRFSCCLVQPDKSFHSRLEFGDQIIAG-----KSLNLP--PNSFTIKL----------NGQRGCINDCGSVLTVI  215 (321)
Q Consensus       156 ---~~~~Fs~~l~~~~~~~~g~l~~G~~d~~~-----t~l~i~--~~~~~i~~----------~~~~~~iiDSGTt~~~l  215 (321)
                         .+++||+||.+......|.|+||++|...     +++++.  ...|.++.          ..+..+||||||++++|
T Consensus       147 g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~~~~~~~v~l~~i~i~~~~~~~~~~~iiDSGt~~~~l  226 (325)
T d2apra_         147 GLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLIL  226 (325)
T ss_dssp             TSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEECCEEEEECTTCSSEEE
T ss_pred             ccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecCCCceEEEEEeeEEECCEeecceeeeeccCCCccccC
Confidence               45789999977543467999999999763     566654  34676642          34567999999999999


Q ss_pred             chHHHHHHHHHHHHHhccCCcccccccCCCccceEecCCCCCCCCeEEEEEeCcEEEeCCCceEEEcCCCeEEEEEecCC
Q 046254          216 ECEVYAVLTAEFIDYFSQHDIEKLFTCRKCGVTCFNLPARFNSFPSMTYHFQGADLVVEPENVFIFNHQDSFFFFFGPAF  295 (321)
Q Consensus       216 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~i~~~f~g~~~~i~~~~y~~~~~~~~~C~~~~~~~  295 (321)
                      |.++|++|.+.+.+..             ....+|..+|....+|+|+|+|+|.+++|||++|+++..++.+|+++... 
T Consensus       227 p~~~~~~l~~~~~~~~-------------~~~~~~~~~C~~~~~p~i~f~f~g~~~~i~~~~y~~~~~~~~C~~~i~~~-  292 (325)
T d2apra_         227 PNNIAASVARAYGASD-------------NGDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFEEFQGQCIAGFGYG-  292 (325)
T ss_dssp             EHHHHHHHHHHHTCEE-------------CSSSCEEECSCGGGCCCEEEEETTEEEEECGGGGEEEEETTEEEESEEEE-
T ss_pred             CHHHHHHHHHHhCCcc-------------cCCCceeecccCCCCCcEEEEECCEEEEEChHHeEEecCCCEEEEEEccC-
Confidence            9999999998875332             11123333333345799999998889999999999987766544566554 


Q ss_pred             CCCCCceeeechheeeeEEEEeCCCC
Q 046254          296 TPRKGKTILGARHQHNTQFVYDLDTF  321 (321)
Q Consensus       296 ~~~~~~~ilG~~fl~~~~vvfD~~~~  321 (321)
                        ..+.+|||+.|||++|+|||+|+.
T Consensus       293 --~~~~~iLG~~flr~~y~vfD~~~~  316 (325)
T d2apra_         293 --NWGFAIIGDTFLKNNYVVFNQGVP  316 (325)
T ss_dssp             --SSSSEEECHHHHTTEEEEEETTTT
T ss_pred             --CCCCEEECHHHhCcEEEEEECCCC
Confidence              346799999999999999999974
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure